CsaV3_7G000500 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_7G000500
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr7 : 573024 .. 573498 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAATCGGTGTACTATCAGGAGGAAGGTCGTCATCGTCACCGTGGAGAGAGAGAAATTTTATTGAGATTGAGAGAGAAATCGCCGGCGTTTTCTCGGGATTCCCGCCGGAAAATTTGTTTAAAGCTCTGCCGCAAGTTTTTGACCGGAAATGCTTCTTCATCTTCTTGAAATGGCAGGGAATTAATACTTCAAGGCTTTTTCTTCCTACGAAACCTCGTTGGCTTCCTTCTCTGGGACGCCATTGTTGTTGAGTTTCTTGTTACTGGCTAGGAGGTATTGTTAACGACCGTGAAGTGCCCGTTATCGTCAATGAAGAGTCGTTGCTTTACATTTGAACGTTTTGTAACTGGTTAAATTGTTCCAGTGATTGTTTAGGTTCAGTTCATGAATTTTTCTTTGTATAATTTGTGGCAGATTGAATGGGTGATCGATCGTGGTTGTGATTGGAGTTCAGTTTTCGTAGCTGTGTGA

mRNA sequence

ATGAAAATCGGTGTACTATCAGGAGGAAGGTCGTCATCGTCACCGTGGAGAGAGAGAAATTTTATTGAGATTGAGAGAGAAATCGCCGGCGTTTTCTCGGGATTCCCGCCGGAAAATTTGTTTAAAGCTCTGCCGCAAGAGGTATTGTTAACGACCGTGAAGTGCCCGTTATCGTCAATGAAGAGTCGTTGCTTTACATTTGAACGTTTTATTGAATGGGTGATCGATCGTGGTTGTGATTGGAGTTCAGTTTTCGTAGCTGTGTGA

Coding sequence (CDS)

ATGAAAATCGGTGTACTATCAGGAGGAAGGTCGTCATCGTCACCGTGGAGAGAGAGAAATTTTATTGAGATTGAGAGAGAAATCGCCGGCGTTTTCTCGGGATTCCCGCCGGAAAATTTGTTTAAAGCTCTGCCGCAAGAGGTATTGTTAACGACCGTGAAGTGCCCGTTATCGTCAATGAAGAGTCGTTGCTTTACATTTGAACGTTTTATTGAATGGGTGATCGATCGTGGTTGTGATTGGAGTTCAGTTTTCGTAGCTGTGTGA

Protein sequence

MKIGVLSGGRSSSSPWRERNFIEIEREIAGVFSGFPPENLFKALPQEVLLTTVKCPLSSMKSRCFTFERFIEWVIDRGCDWSSVFVAV
Homology
[Close]
BLAST of CsaV3_7G000500 vs. NCBI nr
Match: KGN43189.1 (hypothetical protein Csa_7G007870 [Cucumis sativus])

HSP 1 Score: 187.2 bits (474), Expect = 2.4e-44
Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 0 

Query: 1  MKIGVLSGGRSSSSPWRERNFIEIEREIAGVFSGFPPENLFKALPQEVLLTTVKCPLSSM 60
          MKIGVLSGGRSSSSPWRERNFIEIEREIAGVFSGFPPENLFKALPQEVLLTTVKCPLSSM
Sbjct: 1  MKIGVLSGGRSSSSPWRERNFIEIEREIAGVFSGFPPENLFKALPQEVLLTTVKCPLSSM 60

Query: 61 KSRCFTFERFIEWVIDRGCDWSSVFVAV 89
          KSRCFTFERFIEWVIDRGCDWSSVFVAV
Sbjct: 61 KSRCFTFERFIEWVIDRGCDWSSVFVAV 88

[Close]
BLAST of CsaV3_7G000500 vs. TrEMBL
Match: tr|A0A0A0K2E2|A0A0A0K2E2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G007870 PE=4 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 1.6e-44
Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 0 

Query: 1  MKIGVLSGGRSSSSPWRERNFIEIEREIAGVFSGFPPENLFKALPQEVLLTTVKCPLSSM 60
          MKIGVLSGGRSSSSPWRERNFIEIEREIAGVFSGFPPENLFKALPQEVLLTTVKCPLSSM
Sbjct: 1  MKIGVLSGGRSSSSPWRERNFIEIEREIAGVFSGFPPENLFKALPQEVLLTTVKCPLSSM 60

Query: 61 KSRCFTFERFIEWVIDRGCDWSSVFVAV 89
          KSRCFTFERFIEWVIDRGCDWSSVFVAV
Sbjct: 61 KSRCFTFERFIEWVIDRGCDWSSVFVAV 88

The following BLAST results are available for this feature:
BLAST of CsaV3_7G000500 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN43189.12.4e-44100.00hypothetical protein Csa_7G007870 [Cucumis sativus][more]
BLAST of CsaV3_7G000500 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsaV3_7G000500 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsaV3_7G000500 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0K2E2|A0A0A0K2E2_CUCSA1.6e-44100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G007870 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_7G000500.1CsaV3_7G000500.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_7G000500Cucumber (Chinese Long) v3cuccucB098
CsaV3_7G000500Cucumber (Chinese Long) v3cuccucB101
CsaV3_7G000500Silver-seed gourdcarcucB0244
CsaV3_7G000500Silver-seed gourdcarcucB0347
CsaV3_7G000500Silver-seed gourdcarcucB1026
CsaV3_7G000500Cucumber (Gy14) v2cgybcucB093
CsaV3_7G000500Cucumber (Gy14) v2cgybcucB095
CsaV3_7G000500Cucumber (Gy14) v2cgybcucB348
CsaV3_7G000500Cucumber (Gy14) v1cgycucB257
CsaV3_7G000500Cucumber (Gy14) v1cgycucB580
CsaV3_7G000500Cucurbita maxima (Rimu)cmacucB0177
CsaV3_7G000500Cucurbita maxima (Rimu)cmacucB0231
CsaV3_7G000500Cucurbita maxima (Rimu)cmacucB0638
CsaV3_7G000500Cucurbita maxima (Rimu)cmacucB0769
CsaV3_7G000500Cucurbita maxima (Rimu)cmacucB0958
CsaV3_7G000500Cucurbita moschata (Rifu)cmocucB0161
CsaV3_7G000500Cucurbita moschata (Rifu)cmocucB0219
CsaV3_7G000500Cucurbita moschata (Rifu)cmocucB0622
CsaV3_7G000500Cucurbita moschata (Rifu)cmocucB0757
CsaV3_7G000500Cucurbita moschata (Rifu)cmocucB0948
CsaV3_7G000500Cucurbita pepo (Zucchini)cpecucB0139
CsaV3_7G000500Cucurbita pepo (Zucchini)cpecucB0322
CsaV3_7G000500Cucurbita pepo (Zucchini)cpecucB0869
CsaV3_7G000500Cucurbita pepo (Zucchini)cpecucB0947
CsaV3_7G000500Cucurbita pepo (Zucchini)cpecucB1042
CsaV3_7G000500Wild cucumber (PI 183967)cpicucB118
CsaV3_7G000500Wild cucumber (PI 183967)cpicucB119
CsaV3_7G000500Wild cucumber (PI 183967)cpicucB415
CsaV3_7G000500Bottle gourd (USVL1VR-Ls)cuclsiB524
CsaV3_7G000500Bottle gourd (USVL1VR-Ls)cuclsiB529
CsaV3_7G000500Bottle gourd (USVL1VR-Ls)cuclsiB570
CsaV3_7G000500Melon (DHL92) v3.5.1cucmeB549
CsaV3_7G000500Melon (DHL92) v3.5.1cucmeB568
CsaV3_7G000500Melon (DHL92) v3.6.1cucmedB537
CsaV3_7G000500Melon (DHL92) v3.6.1cucmedB554
CsaV3_7G000500Watermelon (Charleston Gray)cucwcgB558
CsaV3_7G000500Watermelon (Charleston Gray)cucwcgB571
CsaV3_7G000500Watermelon (Charleston Gray)cucwcgB599
CsaV3_7G000500Watermelon (97103) v1cucwmB604
CsaV3_7G000500Watermelon (97103) v1cucwmB634
CsaV3_7G000500Watermelon (97103) v1cucwmB640
CsaV3_7G000500Watermelon (97103) v2cucwmbB539
CsaV3_7G000500Watermelon (97103) v2cucwmbB549
CsaV3_7G000500Watermelon (97103) v2cucwmbB578
CsaV3_7G000500Wax gourdcucwgoB695
CsaV3_7G000500Wax gourdcucwgoB701
CsaV3_7G000500Wax gourdcucwgoB706