CsaV3_7G000170 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_7G000170
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	Chromatin remodeling protein EBS
Location	chr7 : 330803 .. 336925 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TCATTCTTTATGTAAATTAGTTTGTCATTTATTCTATAATTATAAAAATTCCTTACTTCTTCCTTATTCTACAAAATTTGATATTTAGACTCTATTATTATTAGTATGATAGGAATTGGAAAAGATATATAGGTGTAGTGAAATAAATGACGAAGCAAATACAATAATATAGCTCTAAGTAGAGAGTAGGTAAGAAAAATCATCTTTTAGGAGAAATTTTTTTAGAAAGGTTAAAAAAAATAATATTCACCAATTGCAATCACGGTTACAAAAATAAAAAATATGGCTTTCATTTGGTCCACCGTCGCGAACTCATATTGGTTTGATCATATGCTGCCACGTCACAACTAAATCCACTCTTCCGCCGGACATTCTCCCCTTTTCACCTCAACCGACCACCCTCCAGGTACTCTCCGGCGACTACTTTTCCGGCCAATTTCACTCTTCTACTTTCCTTTTACTTCTTCCTTCCTTCCTTCCTTCCTTCCTTCCATTCATTTCTATGAAACTTCCCTCCATTTCGCTTCTTCTCTTCTAATTCCAGGTCTCCCTTTTGATGGCCAAACCCAAGGCTCCCAGGCAAACCCTAGATTCTTACACTGTCAAGCGCATCAACAAAACCATTAAAGGTATTGCAATCAATCCCTCTCTTTCCTCTTCCTTTTTTCTTGAAATCCTTCCATTTTTCATCCATTTCTCATCTTTTGGATTTTTTCGGCCTTTTGTTCTCCTTAGCCGGCGATTGCGTGCTTATGAGGCCCTCTGAACCTTCGAAGCCGTCTTATGTTGCTAAGATTGAAAAGATTGAAGCTGATTCTCGTGGGGCCAATGTGAAGGTCCATGTTCGCTGGTATTACCGGCCGGAGGAATCAATTGGTGGTCGGAGACAGTTTCATGGCTCGAAGGAGCTCTTTCTTTCCGACCATTTTGACGTTCAAAGCGCCGATACCATCGAGGGAAAGTGTACGGTCCATACGTTTAAGAATTATACCAAGCTTGATGCTGTTGGAAATGATGATTATTTTTGCCGTTTCGACTATAATTCCACTACTGGAGCTTTCAATCCCGATCGAGTAGCTGTGTGAGTCTTTTTAGTAATTGTATTTTTTATTGCTGGGTTTGATATTCTGTTCATGTGTTTGGCATTAAGTACTTCTGAAATTTTATCAATTCTGACTTGACTTGACATGTGGATAATTTGGTTTCTACAGATTTCCATAGTGACTATTACTACTTTGGCTGCATTGTGGTTCCAGCGTTGATTTTCTTGGTTTTCTGTTCACAATTATGCAATTCATGAATTGAAGTACCAAAATCTCTTTGATTTGGTGTTCTTATATTGCCTTTTTAGTTTATGCATGACATTTCTTATTTAAAGATTGAATTTTGATCAGGATTCCATTATACTGTATTATGTATATTTTTATATCTCATGTTAGTTATTTAAGCTCATGAATCTCCTTTTTTGCATAGCTTAACCTGATTCTCCTGGTTCCTAATTTCACTTCATTTTTGTTGCAGGTATTGCAAGTGTGAGATGCCTTACAATCCCGATGACCTAATGGTTCAGTGTGAGAACTGCAGTGATTGGTAAGCTGGGTCTTTATGATGCTATTCATTTCATTTGCAACCTTAGCGCGTGCTTATGAAGTTATTTAGTGGTTTACGTATGTTCAAATTCAGGGCCTATTAGAAACACAATTACGGTTAAAACAAACTCACGAAAAATTAAACCACCACTGTAATATGGCTCTGTCTTGATTTTTGGTACTTTCAGCTTGTTATAGTTTTGTTTTAGTGATGAAGTAATGGAAAATAAAGTTTAGAAAGGCAATAAATAGGAGATTAACTAAAAAGAACTTTTGTCCGATGTAATGTTTCCAAAATGCTGGAATCTGGATGCGCTCTGAACTCTGAAGTGGTGAGCTTTTTATTTTCTAAGAGTCAGGAAGTGCACATAATATCTTACTTGCAGAGAAGCTAGACACTTCACATGAGAGAAAAACGTTTTCTGTGATGAAGAAGATATTAAAACCGACATAAAATATGTGGTTGGATATGTCTCTGTGCTCTTGACGGGAAACTGGTACTTCGAATTATAAAGCTGTAAGGTATCTCCTTACAAACAAGTATTATTGGATGAAAAGAAGAGCCCTAAGGCTACAACCCTTCTCACTGTGAGAGTCTAATACTAATTCCAAGCTAAAGAAAAATGAAATACCAACCTCCGCTATTATACTACCTCTTCCAACCCAAAATACCCCTCTGCTCTCACCTGGTCCCCCTCATCCCCTTTCCCACAATATTTCCATCTCACTCCCATACATAACTAATCTCACTCCCATACATAACTAACTTCCTCCCACAATTACATTCTTGCCCTTCCCCTTGTACTGATGGATGATTGGTGGTCTCACTGAAGCACCACTAATCTTTTAGTTGGAAAAAAGGCATGGTACTATAAGTTTTAATTTGAAATCAGTAATGTGTTTGAGCTCAAACAAAAGGCCTATTGAGCTTATACGCTACAAATAAGAGGGATGTATTTCATCAAAAGAAGGCATAAAACAGCCCAAGTGCTGGGGGGAGAGGGAACCCCACCCAAGAGAATGACTTATAAAGAAGGCTTCCAATCATGACACCACCCAGAAGCAGACTGAGCTTATTTATATTGAAAAAGGCTATCTAAAATTACAATGATATAGGTTTTGTTTGAATCTGATTTTAGTTAGAAACTTCAATTGGAGTCTTTTCTTTCCACAGAACTTTTTGTATTAACACCACTTTGCTGTTTTCTCAAAATTAGTATTTCTATTTCTTTCTGTTATCTCCTTTTATAGAGGCTTTTTGGCGTGCTTTTGGATGTAATTTTTGCATTTTCTTAATTAGAAGTCTCTTCTACTGGAGACGTTCTCCAAATTTCATTCTTATGTGGTTTAGAAATCATCTATATGTGGTTTCATCTAGGTAGAAAATCATATATGCACTTTTTTTTTCCCGTAAATTTGTTATCTCTAAATGGCAAGCCCTTCAACAAGGAAAAGAAAAATCCTTGGTGCCTTCAGCTCACTAGAACATTGATGTAATTCAAAGTTGGATTTGGATCCTTTCTTTTATTCAAGAATTCTAATCTACCATTCTCAATAGGAGAATGGTTATTTATAGATGTGAATGATGGTTATAGCTAATTGTTTGAGTGTAACTAATCAGTTATTGTAACTGATTAGTTTTGAAGAAAACAGAAAAAACAGCTAATAACAGAAAATAACAGAAAACAGCTAATAACAGGAAATAACAAAAAACAGCTAATAACAGGAAAATGGCTAATATCTATTTGTGTTGTTTATTATGACTGTGTATTGCATCAATCATTCTTATGGAATCTAATAGCTGGTTCAAAAGGAACAATAGAAATTTAATGACAAAGAAACCCATACAGACAAATTCATTGACAATTTTTTTTGTGCAGCCCTCAAATGGTGTAAATTATGCCTTTAATAGCTATAGACTATAAAATAATTGGAATTGTTTTTTGTGATCTTCCATGGTTTGGATCTGGGTTTTTCTCCCCCTTCCCATTTGTAAGTTTATATCATCTATGAAATAACTTATGTCCCCCCTTCCCTTTCCCTTCTCTTCTTCTAGAGGCCATGTATTCAAGTCCTCCTAAGTTCAAAACTCAATAACTAAAAAAAGATTGTCTTTTGGGTCATGCCTATATAGTTAAGTATTATATCATCAATAAAATGTCAGATGTTCAAATCTCAACTCCTACTTGTAGTTAAGATAAGATTTTTTTTCAAGAAAAGTTTTTTCTTCCAGAGCTGGTCTTTAGTGGGCAAAGCCTTCCTATAGATCATTGGAATGTGTCATAATCATAATACACAAATCTCAGTTTTTTGTTGTGTATAGTTCCAACCAATGAATAGGGTTAGTGTTCCTATAAGCTTTAGGATGAGCATTCTGGATTTTGAATTATTTGAGCAGGTTAATATGGGAAGATGAAACAAACTAGCAGTTTTTCTTTTAAATTTTTAAAGTAATTTGATCTTTTAGTGGATACTGAATTTTTTTTTTATTATTTTATTGAATAACCTGTTCACTTCTATTTCTATATATCAACATATTTCTGAAATCCTTTGATGGAATTCTTTGAGGTCCTTGTAAAAAGTCAGTATGAGGTTTTTGAAAATCTGTGGATTGTTGGGATGGAACCTCATGTCACATTTATCAAAACAAAAGTATCCTTCTGAGGATTCTGACCAATGGGAACATTTTGTCAAGGAGCGGAATTGTAAACTCTATGAAGTTGTGAAGTCTTGGGAATCATCAGGCATGAGCTTCCGGGCCAAAATGTAAGGAGCTAGTGATGCATAAAACCCCCTCAATTCCTTGGGCCAAACACCTCTTAAAGAGTTTTTGAGACGTAGAAGAAGAAAGGAGAAACCTTTCATGTCTTAGGCTCTTCAATTCCTAACGAATGACAGAGGATAAATTCTGGGACATTACATGAAATAAAATTTATTTTCAGGACATGATTACTAGTAAATCTTCTTTCAATTGATTTACCTTTGGCGTTGTTCAATTGATGTCTGCTTGAGATATTTTGTGAAACGTTGGTGTAATCTATTGCTTTATAACACAAAGTGTGGGTCTTGAAGTGGATAATATTTTTGTTTTAGGTTTCATCCTGCTTGTATAGAAATGACTACAGAAGAAGCTAAAAAGCTTGACCACTTCTACTGTGAAAGTTGTTCTTCAGAGGGTCAAAAGAAGTTGCAGAATTCACAGTCTACATCTAAAGTTGCAGAGACAAAGGTATTTGTAAAGCTGCTGAAAATATAACTGCGCTTTGTTGAATGTCAATGTTTGGATTATTTTGTTGTTGATCAAACTGCATAATCTAATTCCACATTGTGATATTTTAGACTACGCCATGTTTCATAGATCCTTAATGTAGCACTTAGCAGGTGTCATCCACGTACATTCTTCTTTTTAGGTATTTCTTCCTCATTTGGTTGGTAGCGTAGGTAGCATTGGACTTTAGTTATGGGGAAAGAAAGAGTTAACTGAGCCTGAGGAAGTCATATTGCTAAGTAGAAGCTACCATAACCACCATCAGTTGCATGATGGTCAATAGGGGTACGTTATGGCCACCTACTTAACGTTTAATATCCTATGAATTTTCTTGACAACAAATGTCTAATCAGGTAGTTGTTTCATAAGAATTATCAAAGTATACACAAGCTAGTTTGTACACTTGTTGGTATATAAGGAAAAAGGAAAAATCTGGAAGTGCGCTAATAGCTGCATACAAGTCAGATTACTTGGTTCAAGCGTTGGCATTGGTTAGTTTTTACCAAAAGCTTATATAGTGGTACTATAGTGTGATAATGTAAGGGATGAATGGGTGTTACTTTCTTGCTTTAGGATTATGGTTGTTGTCATAATGCATAATATGTTTTAATCCTATTTCAGGTGGATACGAAACGACGCCGGAGGTGACAATAGTGTAAATAAACAAAATACGGTGACTTAGAGTCGTTAAAAACCAACCAGAGCTTCTAACTTCCAAATGAGTTGGAACAAGTGCATAGATGTAGGATAATGTAAATTGTAGCTCTAGTGTGTTCAACATTGGTTGCAGCAGGTAGAGAGACTGGTTTGAAATGTATTGAAGTTATTTTATTTGAAAATGGAGCAAACCAAACCAAACCAAACCAAAAACCCCTCCTTTCTTCTATGAAGGTTGTAGATTTGTTTTATTTCCTCAAAACTCCTAAACTTTTAACTCTTTTGGAATCCATTTTCCTAATTATTCTTAGCTGATATGGTGATGTATAGGTGAAAAATATTTGTCAAGGACTGAAGGGTAGTAGGAAAGAGATCTTTATGTAATTATTTGGTTGCAAGTTGATTGGACTGACGACTCTTGTGTGTACCGTACCAACCTCTCCCTTTAGAAGTTTTAATGAAGAAAAAAAAGAGACTATTTTAACCAAGTGGCTGATGTTGGTTATTATCTTAATGTTTTATCTTTGTTTGTGATTGTGAAGAGGTTAATATAATATTTGGAGGGACAGATTAATGAAGGAAAGCTTATAGTTTGTCACACTCTCAAAA

mRNA sequence

ATGGCCAAACCCAAGGCTCCCAGGCAAACCCTAGATTCTTACACTGTCAAGCGCATCAACAAAACCATTAAAGCCGGCGATTGCGTGCTTATGAGGCCCTCTGAACCTTCGAAGCCGTCTTATGTTGCTAAGATTGAAAAGATTGAAGCTGATTCTCGTGGGGCCAATGTGAAGGTCCATGTTCGCTGGTATTACCGGCCGGAGGAATCAATTGGTGGTCGGAGACAGTTTCATGGCTCGAAGGAGCTCTTTCTTTCCGACCATTTTGACGTTCAAAGCGCCGATACCATCGAGGGAAAGTGTACGGTCCATACGTTTAAGAATTATACCAAGCTTGATGCTGTTGGAAATGATGATTATTTTTGCCGTTTCGACTATAATTCCACTACTGGAGCTTTCAATCCCGATCGAGTAGCTGTGTATTGCAAGTGTGAGATGCCTTACAATCCCGATGACCTAATGGTTCAGTGTGAGAACTGCAGTGATTGGTTTCATCCTGCTTGTATAGAAATGACTACAGAAGAAGCTAAAAAGCTTGACCACTTCTACTGTGAAAGTTGTTCTTCAGAGGGTCAAAAGAAGTTGCAGAATTCACAGTCTACATCTAAAGTTGCAGAGACAAAGGTGGATACGAAACGACGCCGGAGGTGA

Coding sequence (CDS)

ATGGCCAAACCCAAGGCTCCCAGGCAAACCCTAGATTCTTACACTGTCAAGCGCATCAACAAAACCATTAAAGCCGGCGATTGCGTGCTTATGAGGCCCTCTGAACCTTCGAAGCCGTCTTATGTTGCTAAGATTGAAAAGATTGAAGCTGATTCTCGTGGGGCCAATGTGAAGGTCCATGTTCGCTGGTATTACCGGCCGGAGGAATCAATTGGTGGTCGGAGACAGTTTCATGGCTCGAAGGAGCTCTTTCTTTCCGACCATTTTGACGTTCAAAGCGCCGATACCATCGAGGGAAAGTGTACGGTCCATACGTTTAAGAATTATACCAAGCTTGATGCTGTTGGAAATGATGATTATTTTTGCCGTTTCGACTATAATTCCACTACTGGAGCTTTCAATCCCGATCGAGTAGCTGTGTATTGCAAGTGTGAGATGCCTTACAATCCCGATGACCTAATGGTTCAGTGTGAGAACTGCAGTGATTGGTTTCATCCTGCTTGTATAGAAATGACTACAGAAGAAGCTAAAAAGCTTGACCACTTCTACTGTGAAAGTTGTTCTTCAGAGGGTCAAAAGAAGTTGCAGAATTCACAGTCTACATCTAAAGTTGCAGAGACAAAGGTGGATACGAAACGACGCCGGAGGTGA

Protein sequence

MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHFDVQSADTIEGKCTVHTFKNYTKLDAVGNDDYFCRFDYNSTTGAFNPDRVAVYCKCEMPYNPDDLMVQCENCSDWFHPACIEMTTEEAKKLDHFYCESCSSEGQKKLQNSQSTSKVAETKVDTKRRRR

Homology

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BLAST of CsaV3_7G000170 vs. NCBI nr
Match: XP_011658548.1 (PREDICTED: protein winged eye-like [Cucumis sativus] >KGN43157.1 hypothetical protein Csa_7G004100 [Cucumis sativus])

HSP 1 Score: 422.5 bits (1085), Expect = 8.4e-115
Identity = 216/216 (100.00%), Postives = 216/216 (100.00%), Query Frame = 0


Query: 1   MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEXXXXXXXXXXXXXEADSRGANVKVH 60
           MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEXXXXXXXXXXXXXEADSRGANVKVH
Sbjct: 1   MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEXXXXXXXXXXXXXEADSRGANVKVH 60

Query: 61  VRWYYRPEESIGGRRQFHGSKELFLSDHFDVQSADTIEGKCTVHTFKNYTKLDAVGNDDY 120
           VRWYYRPEESIGGRRQFHGSKELFLSDHFDVQSADTIEGKCTVHTFKNYTKLDAVGNDDY
Sbjct: 61  VRWYYRPEESIGGRRQFHGSKELFLSDHFDVQSADTIEGKCTVHTFKNYTKLDAVGNDDY 120

Query: 121 FCRFDYNSTTGAFNPDRVAVYCKCEMPYNPDDLMVQCENCSDWFHPACIEMTTEEAKKLD 180
           FCRFDYNSTTGAFNPDRVAVYCKCEMPYNPDDLMVQCENCSDWFHPACIEMTTEEAKKLD
Sbjct: 121 FCRFDYNSTTGAFNPDRVAVYCKCEMPYNPDDLMVQCENCSDWFHPACIEMTTEEAKKLD 180

Query: 181 HFYCESCSSEGQKKLQNSQSTSKVAETKVDTKRRRR 217
           HFYCESCSSEGQKKLQNSQSTSKVAETKVDTKRRRR
Sbjct: 181 HFYCESCSSEGQKKLQNSQSTSKVAETKVDTKRRRR 216

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BLAST of CsaV3_7G000170 vs. NCBI nr
Match: XP_008448075.2 (PREDICTED: chromatin remodeling protein SHL-like [Cucumis melo])

HSP 1 Score: 417.2 bits (1071), Expect = 3.5e-113
Identity = 213/216 (98.61%), Postives = 214/216 (99.07%), Query Frame = 0


Query: 1   MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEXXXXXXXXXXXXXEADSRGANVKVH 60
           MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEXXXXXXXXXXXXXEADSRG NVKVH
Sbjct: 1   MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEXXXXXXXXXXXXXEADSRGGNVKVH 60

Query: 61  VRWYYRPEESIGGRRQFHGSKELFLSDHFDVQSADTIEGKCTVHTFKNYTKLDAVGNDDY 120
           VRWYYRPEESIGGRRQFHGSKELFLSDHFDVQSADTIEGKCTVHTFKNYTKLDAVGNDDY
Sbjct: 61  VRWYYRPEESIGGRRQFHGSKELFLSDHFDVQSADTIEGKCTVHTFKNYTKLDAVGNDDY 120

Query: 121 FCRFDYNSTTGAFNPDRVAVYCKCEMPYNPDDLMVQCENCSDWFHPACIEMTTEEAKKLD 180
           FCRFDYNSTTGAFNPDRVAVYCKCEMPYNPDDLMVQCE+CSDWFHPACIEMT EEAKKLD
Sbjct: 121 FCRFDYNSTTGAFNPDRVAVYCKCEMPYNPDDLMVQCESCSDWFHPACIEMTAEEAKKLD 180

Query: 181 HFYCESCSSEGQKKLQNSQSTSKVAETKVDTKRRRR 217
           HFYCESCSSEGQKKLQNSQSTSKVAETKVDTKRRRR
Sbjct: 181 HFYCESCSSEGQKKLQNSQSTSKVAETKVDTKRRRR 216

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BLAST of CsaV3_7G000170 vs. NCBI nr
Match: XP_022135772.1 (chromatin remodeling protein SHL-like [Momordica charantia])

HSP 1 Score: 407.5 bits (1046), Expect = 2.8e-110
Identity = 206/216 (95.37%), Postives = 215/216 (99.54%), Query Frame = 0


Query: 1   MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEXXXXXXXXXXXXXEADSRGANVKVH 60
           MAKPKAPRQTLDSYTVKRINKTI+AGDCVLMRPSEXXXXXXXXXXXXXEADSRGANVKVH
Sbjct: 29  MAKPKAPRQTLDSYTVKRINKTIRAGDCVLMRPSEXXXXXXXXXXXXXEADSRGANVKVH 88

Query: 61  VRWYYRPEESIGGRRQFHGSKELFLSDHFDVQSADTIEGKCTVHTFKNYTKLDAVGNDDY 120
           VRWYYRPEESIGGRRQFHGSKE+FLSDHFDVQSADTIEGKCTVHTFK+YTKLDAVGNDDY
Sbjct: 89  VRWYYRPEESIGGRRQFHGSKEVFLSDHFDVQSADTIEGKCTVHTFKSYTKLDAVGNDDY 148

Query: 121 FCRFDYNSTTGAFNPDRVAVYCKCEMPYNPDDLMVQCENCSDWFHPACIEMTTEEAKKLD 180
           FCRF+YNS+TGAFNPDRVAVYCKCEMPYNPDDLMVQCE+CSDWFHPACIEMT EEAKKLD
Sbjct: 149 FCRFEYNSSTGAFNPDRVAVYCKCEMPYNPDDLMVQCESCSDWFHPACIEMTVEEAKKLD 208

Query: 181 HFYCESCSSEGQKKLQNSQSTSKVAETKVDTKRRRR 217
           HF+CESCSSEGQKKLQNSQSTS++AETKVDTKRRRR
Sbjct: 209 HFFCESCSSEGQKKLQNSQSTSRLAETKVDTKRRRR 244

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BLAST of CsaV3_7G000170 vs. NCBI nr
Match: XP_022924958.1 (chromatin remodeling protein SHL-like isoform X1 [Cucurbita moschata] >XP_022924967.1 chromatin remodeling protein SHL-like isoform X1 [Cucurbita moschata] >XP_023529358.1 chromatin remodeling protein SHL-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 399.1 bits (1024), Expect = 9.9e-108
Identity = 203/216 (93.98%), Postives = 210/216 (97.22%), Query Frame = 0


Query: 1   MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEXXXXXXXXXXXXXEADSRGANVKVH 60
           MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEXXXXXXXXXXXXXEADSRGANVKVH
Sbjct: 1   MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEXXXXXXXXXXXXXEADSRGANVKVH 60

Query: 61  VRWYYRPEESIGGRRQFHGSKELFLSDHFDVQSADTIEGKCTVHTFKNYTKLDAVGNDDY 120
           VRWYYRPEESIGGRRQFHGSKELFLSDH+DVQSADTIEGKCTVHTFKNYTKLDAVGN+DY
Sbjct: 61  VRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGKCTVHTFKNYTKLDAVGNEDY 120

Query: 121 FCRFDYNSTTGAFNPDRVAVYCKCEMPYNPDDLMVQCENCSDWFHPACIEMTTEEAKKLD 180
           F RFDYNS TGAF PDRVAVYCKCEMPYNPDDLMVQCE CSDWFHPACIEM+ E+AKKLD
Sbjct: 121 FSRFDYNSATGAFTPDRVAVYCKCEMPYNPDDLMVQCERCSDWFHPACIEMSAEKAKKLD 180

Query: 181 HFYCESCSSEGQKKLQNSQSTSKVAETKVDTKRRRR 217
           HF+CESCS EGQKKLQNSQSTSK+AETKVD+KRRRR
Sbjct: 181 HFFCESCSPEGQKKLQNSQSTSKIAETKVDSKRRRR 216

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BLAST of CsaV3_7G000170 vs. NCBI nr
Match: XP_023529360.1 (chromatin remodeling protein SHL-like isoform X3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 399.1 bits (1024), Expect = 9.9e-108
Identity = 203/216 (93.98%), Postives = 210/216 (97.22%), Query Frame = 0


Query: 1   MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEXXXXXXXXXXXXXEADSRGANVKVH 60
           MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEXXXXXXXXXXXXXEADSRGANVKVH
Sbjct: 29  MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEXXXXXXXXXXXXXEADSRGANVKVH 88

Query: 61  VRWYYRPEESIGGRRQFHGSKELFLSDHFDVQSADTIEGKCTVHTFKNYTKLDAVGNDDY 120
           VRWYYRPEESIGGRRQFHGSKELFLSDH+DVQSADTIEGKCTVHTFKNYTKLDAVGN+DY
Sbjct: 89  VRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGKCTVHTFKNYTKLDAVGNEDY 148

Query: 121 FCRFDYNSTTGAFNPDRVAVYCKCEMPYNPDDLMVQCENCSDWFHPACIEMTTEEAKKLD 180
           F RFDYNS TGAF PDRVAVYCKCEMPYNPDDLMVQCE CSDWFHPACIEM+ E+AKKLD
Sbjct: 149 FSRFDYNSATGAFTPDRVAVYCKCEMPYNPDDLMVQCERCSDWFHPACIEMSAEKAKKLD 208

Query: 181 HFYCESCSSEGQKKLQNSQSTSKVAETKVDTKRRRR 217
           HF+CESCS EGQKKLQNSQSTSK+AETKVD+KRRRR
Sbjct: 209 HFFCESCSPEGQKKLQNSQSTSKIAETKVDSKRRRR 244

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BLAST of CsaV3_7G000170 vs. TAIR10
Match: AT4G39100.1 (PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein)

HSP 1 Score: 307.0 bits (785), Expect = 9.3e-84
Identity = 145/213 (68.08%), Postives = 168/213 (78.87%), Query Frame = 0


Query: 1   MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEXXXXXXXXXXXXXEADSRGANVKVH 60
           M K KAPR+ L SY +K INK+I+ GD VLMR SE             E D+RG++ KV 
Sbjct: 1   MPKQKAPRKQLKSYKLKHINKSIQEGDAVLMRSSEPGKPSYVARVEAIETDARGSHAKVR 60

Query: 61  VRWYYRPEESIGGRRQFHGSKELFLSDHFDVQSADTIEGKCTVHTFKNYTKLDAVGNDDY 120
           VRWYYRPEESIGGRRQFHG+KE+FLSDHFD QSADTIEGKC VH+F +YTKLD+VGNDD+
Sbjct: 61  VRWYYRPEESIGGRRQFHGAKEVFLSDHFDFQSADTIEGKCKVHSFSSYTKLDSVGNDDF 120

Query: 121 FCRFDYNSTTGAFNPDRVAVYCKCEMPYNPDDLMVQCENCSDWFHPACIEMTTEEAKKLD 180
           FCRF+YNSTTGAF+PDRV V+CKCEMPYNPDDLMVQCE CS+WFHP+CI  T EEAKK D
Sbjct: 121 FCRFEYNSTTGAFDPDRVTVFCKCEMPYNPDDLMVQCEECSEWFHPSCIGTTIEEAKKPD 180

Query: 181 HFYCESCSSEGQKKLQNSQSTSKVAETKVDTKR 214
           +FYCE CS + Q+ L NS STS   + KV+ KR
Sbjct: 181 NFYCEECSPQ-QQNLHNSNSTSNNRDAKVNGKR 212

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BLAST of CsaV3_7G000170 vs. TAIR10
Match: AT4G22140.1 (PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein)

HSP 1 Score: 300.1 bits (767), Expect = 1.1e-81
Identity = 141/209 (67.46%), Postives = 162/209 (77.51%), Query Frame = 0


Query: 2   AKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEXXXXXXXXXXXXXEADSRGANVKVHV 61
           +K K  R+ LDSYT+K  NK ++AGDCVLMRPS+             EAD+R  NVKVH 
Sbjct: 10  SKIKTGRKELDSYTIKGTNKVVRAGDCVLMRPSDAGKPPYVARVEKIEADARN-NVKVHC 69

Query: 62  RWYYRPEESIGGRRQFHGSKELFLSDHFDVQSADTIEGKCTVHTFKNYTKLDAVGNDDYF 121
           RWYYRPEES+GGRRQFHG+KELFLSDHFDVQSA TIEGKC VHTFKNYT+L+ VG +DY+
Sbjct: 70  RWYYRPEESLGGRRQFHGAKELFLSDHFDVQSAHTIEGKCIVHTFKNYTRLENVGAEDYY 129

Query: 122 CRFDYNSTTGAFNPDRVAVYCKCEMPYNPDDLMVQCENCSDWFHPACIEMTTEEAKKLDH 181
           CRF+Y + TGAF PDRVAVYCKCEMPYNPDDLMVQCE C DW+HPAC+ MT EEAKKLDH
Sbjct: 130 CRFEYKAATGAFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWYHPACVGMTIEEAKKLDH 189

Query: 182 FYCESCSSEGQ-KKLQNSQSTSKVAETKV 210
           F C  CSS+   KK QN  ++S   + KV
Sbjct: 190 FVCAECSSDDDVKKSQNGFTSSPADDVKV 217

[Close]

BLAST of CsaV3_7G000170 vs. TAIR10
Match: AT4G04260.1 (Bromo-adjacent homology (BAH) domain-containing protein)

HSP 1 Score: 212.2 bits (539), Expect = 3.1e-55
Identity = 109/185 (58.92%), Postives = 129/185 (69.73%), Query Frame = 0


Query: 31  MRPSEXXXXXXXXXXXXXEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHFD 90
           MRPS+             EAD+R  NVKVH RWYY PEES GGRRQ HG+KELFLSDHFD
Sbjct: 1   MRPSDAGKAPYVARVEKIEADARN-NVKVHCRWYYCPEESHGGRRQLHGAKELFLSDHFD 60

Query: 91  VQSADTIEGKCTVHTFKNYTKLDAVGNDDYFCRFDYNSTTGAFNPDRVAVYCKCEMPYNP 150
           VQSA TIEGKC VHTFKNYT+L+ VG +DY+C FDY + TGAF PDRVAVY KCEMPYN 
Sbjct: 61  VQSAHTIEGKCIVHTFKNYTRLENVGVEDYYCIFDYKAATGAFTPDRVAVYYKCEMPYNS 120

Query: 151 DDLMVQCENCSDWFHPACIEMTTEEAKKLDHFYCESCSS--EGQKKLQNSQSTSKVAETK 210
           D+LM +   C    H AC+ +T EEAKKL+HF C  CSS  +G K+ QN  ++S   + K
Sbjct: 121 DELM-ELLLCHYRVHLACVGVTIEEAKKLEHFVCVECSSDEDGVKRFQNGFASSTTNDLK 180

Query: 211 VDTKR 214
              ++
Sbjct: 181 PSAEK 183

[Close]

BLAST of CsaV3_7G000170 vs. TAIR10
Match: AT4G14700.1 (origin recognition complex 1)

HSP 1 Score: 49.7 bits (117), Expect = 2.7e-06
Identity = 22/75 (29.33%), Postives = 42/75 (56.00%), Query Frame = 0


Query: 59  VHVRWYYRPEESIGGRRQFHGSKELFLSDHFDVQSADTIEGKCTVHTFKNYTKLDAVGND 118
           +  RWY  PEE++ GR++ +  +EL+L++ F     + +   C V   K ++K    G+D
Sbjct: 263 IRARWYMIPEETVLGRQRHNLKRELYLTNDFADIEMECVLRHCFVKCPKEFSKASNDGDD 322

Query: 119 DYFCRFDYNSTTGAF 134
            + C ++Y+   G+F
Sbjct: 323 VFLCEYEYDVHWGSF 337

[Close]

BLAST of CsaV3_7G000170 vs. TAIR10
Match: AT4G12620.1 (origin of replication complex 1B)

HSP 1 Score: 49.3 bits (116), Expect = 3.5e-06
Identity = 21/69 (30.43%), Postives = 39/69 (56.52%), Query Frame = 0


Query: 59  VHVRWYYRPEESIGGRRQFHGSKELFLSDHFDVQSADTIEGKCTVHTFKNYTKLDAVGND 118
           +  RWY  PEE++ GR+  +  +EL+L++ F     + I   C+V   K ++K    G+D
Sbjct: 266 IRARWYMIPEETVSGRQPHNLKRELYLTNDFADIEMECILRHCSVKCPKEFSKASNDGDD 325

Query: 119 DYFCRFDYN 128
            + C ++Y+
Sbjct: 326 VFLCEYEYD 334

[Close]

BLAST of CsaV3_7G000170 vs. Swiss-Prot
Match: sp|Q9FEN9|SHL_ARATH (Chromatin remodeling protein SHL OS=Arabidopsis thaliana OX=3702 GN=SHL PE=1 SV=1)

HSP 1 Score: 307.0 bits (785), Expect = 1.7e-82
Identity = 145/213 (68.08%), Postives = 168/213 (78.87%), Query Frame = 0


Query: 1   MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEXXXXXXXXXXXXXEADSRGANVKVH 60
           M K KAPR+ L SY +K INK+I+ GD VLMR SE             E D+RG++ KV 
Sbjct: 1   MPKQKAPRKQLKSYKLKHINKSIQEGDAVLMRSSEPGKPSYVARVEAIETDARGSHAKVR 60

Query: 61  VRWYYRPEESIGGRRQFHGSKELFLSDHFDVQSADTIEGKCTVHTFKNYTKLDAVGNDDY 120
           VRWYYRPEESIGGRRQFHG+KE+FLSDHFD QSADTIEGKC VH+F +YTKLD+VGNDD+
Sbjct: 61  VRWYYRPEESIGGRRQFHGAKEVFLSDHFDFQSADTIEGKCKVHSFSSYTKLDSVGNDDF 120

Query: 121 FCRFDYNSTTGAFNPDRVAVYCKCEMPYNPDDLMVQCENCSDWFHPACIEMTTEEAKKLD 180
           FCRF+YNSTTGAF+PDRV V+CKCEMPYNPDDLMVQCE CS+WFHP+CI  T EEAKK D
Sbjct: 121 FCRFEYNSTTGAFDPDRVTVFCKCEMPYNPDDLMVQCEECSEWFHPSCIGTTIEEAKKPD 180

Query: 181 HFYCESCSSEGQKKLQNSQSTSKVAETKVDTKR 214
           +FYCE CS + Q+ L NS STS   + KV+ KR
Sbjct: 181 NFYCEECSPQ-QQNLHNSNSTSNNRDAKVNGKR 212

[Close]

BLAST of CsaV3_7G000170 vs. Swiss-Prot
Match: sp|F4JL28|EBS_ARATH (Chromatin remodeling protein EBS OS=Arabidopsis thaliana OX=3702 GN=EBS PE=1 SV=1)

HSP 1 Score: 300.1 bits (767), Expect = 2.1e-80
Identity = 141/209 (67.46%), Postives = 162/209 (77.51%), Query Frame = 0


Query: 2   AKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEXXXXXXXXXXXXXEADSRGANVKVHV 61
           +K K  R+ LDSYT+K  NK ++AGDCVLMRPS+             EAD+R  NVKVH 
Sbjct: 10  SKIKTGRKELDSYTIKGTNKVVRAGDCVLMRPSDAGKPPYVARVEKIEADARN-NVKVHC 69

Query: 62  RWYYRPEESIGGRRQFHGSKELFLSDHFDVQSADTIEGKCTVHTFKNYTKLDAVGNDDYF 121
           RWYYRPEES+GGRRQFHG+KELFLSDHFDVQSA TIEGKC VHTFKNYT+L+ VG +DY+
Sbjct: 70  RWYYRPEESLGGRRQFHGAKELFLSDHFDVQSAHTIEGKCIVHTFKNYTRLENVGAEDYY 129

Query: 122 CRFDYNSTTGAFNPDRVAVYCKCEMPYNPDDLMVQCENCSDWFHPACIEMTTEEAKKLDH 181
           CRF+Y + TGAF PDRVAVYCKCEMPYNPDDLMVQCE C DW+HPAC+ MT EEAKKLDH
Sbjct: 130 CRFEYKAATGAFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWYHPACVGMTIEEAKKLDH 189

Query: 182 FYCESCSSEGQ-KKLQNSQSTSKVAETKV 210
           F C  CSS+   KK QN  ++S   + KV
Sbjct: 190 FVCAECSSDDDVKKSQNGFTSSPADDVKV 217

[Close]

BLAST of CsaV3_7G000170 vs. Swiss-Prot
Match: sp|F4JGB7|EBSL_ARATH (Chromatin remodeling protein At4g04260 OS=Arabidopsis thaliana OX=3702 GN=At4g04260 PE=3 SV=2)

HSP 1 Score: 223.4 bits (568), Expect = 2.4e-57
Identity = 114/190 (60.00%), Postives = 134/190 (70.53%), Query Frame = 0


Query: 26  GDCVLMRPSEXXXXXXXXXXXXXEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFL 85
           GDCVLMRPS+             EAD+R  NVKVH RWYY PEES GGRRQ HG+KELFL
Sbjct: 43  GDCVLMRPSDAGKAPYVARVEKIEADARN-NVKVHCRWYYCPEESHGGRRQLHGAKELFL 102

Query: 86  SDHFDVQSADTIEGKCTVHTFKNYTKLDAVGNDDYFCRFDYNSTTGAFNPDRVAVYCKCE 145
           SDHFDVQSA TIEGKC VHTFKNYT+L+ VG +DY+C FDY + TGAF PDRVAVY KCE
Sbjct: 103 SDHFDVQSAHTIEGKCIVHTFKNYTRLENVGVEDYYCIFDYKAATGAFTPDRVAVYYKCE 162

Query: 146 MPYNPDDLMVQCENCSDWFHPACIEMTTEEAKKLDHFYCESCSS--EGQKKLQNSQSTSK 205
           MPYN D+LM +   C    H AC+ +T EEAKKL+HF C  CSS  +G K+ QN  ++S 
Sbjct: 163 MPYNSDELM-ELLLCHYRVHLACVGVTIEEAKKLEHFVCVECSSDEDGVKRFQNGFASST 222

Query: 206 VAETKVDTKR 214
             + K   ++
Sbjct: 223 TNDLKPSAEK 230

[Close]

BLAST of CsaV3_7G000170 vs. Swiss-Prot
Match: sp|Q6P949|PHF2_DANRE (Lysine-specific demethylase phf2 OS=Danio rerio OX=7955 GN=phf2 PE=2 SV=3)

HSP 1 Score: 62.0 bits (149), Expect = 9.4e-09
Identity = 24/67 (35.82%), Postives = 42/67 (62.69%), Query Frame = 0


Query: 138 VAVYCKCEMPYNPDDLMVQCENCSDWFHPACIEMTTEEAKKLDHFYCESC-SSEGQKKLQ 197
           V VYC C +PY+    M++C+ C DWFH +C+ +  +EA  +D ++C +C  + G+  L+
Sbjct: 4   VPVYCICRLPYDVTQFMIECDACKDWFHGSCVGVDEDEAPDIDIYHCPNCEKTHGKSTLK 63

Query: 198 NSQSTSK 204
             +S +K
Sbjct: 64  KKKSWNK 70

[Close]

BLAST of CsaV3_7G000170 vs. Swiss-Prot
Match: sp|E6ZGB4|PHF2_DICLA (Lysine-specific demethylase phf2 OS=Dicentrarchus labrax OX=13489 GN=phf2 PE=3 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 2.1e-08
Identity = 23/67 (34.33%), Postives = 42/67 (62.69%), Query Frame = 0


Query: 138 VAVYCKCEMPYNPDDLMVQCENCSDWFHPACIEMTTEEAKKLDHFYCESC-SSEGQKKLQ 197
           V VYC C +PY+    M++C+ C DWFH +C+ +  ++A  +D ++C +C  + G+  L+
Sbjct: 4   VPVYCICRLPYDVTQFMIECDACKDWFHGSCVGVDEDDAPDIDIYHCPNCEKTHGKSTLK 63

Query: 198 NSQSTSK 204
             ++ SK
Sbjct: 64  KKKNWSK 70

[Close]

BLAST of CsaV3_7G000170 vs. TrEMBL
Match: tr|A0A0A0K4E7|A0A0A0K4E7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G004100 PE=4 SV=1)

HSP 1 Score: 422.5 bits (1085), Expect = 5.5e-115
Identity = 216/216 (100.00%), Postives = 216/216 (100.00%), Query Frame = 0


Query: 1   MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEXXXXXXXXXXXXXEADSRGANVKVH 60
           MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEXXXXXXXXXXXXXEADSRGANVKVH
Sbjct: 1   MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEXXXXXXXXXXXXXEADSRGANVKVH 60

Query: 61  VRWYYRPEESIGGRRQFHGSKELFLSDHFDVQSADTIEGKCTVHTFKNYTKLDAVGNDDY 120
           VRWYYRPEESIGGRRQFHGSKELFLSDHFDVQSADTIEGKCTVHTFKNYTKLDAVGNDDY
Sbjct: 61  VRWYYRPEESIGGRRQFHGSKELFLSDHFDVQSADTIEGKCTVHTFKNYTKLDAVGNDDY 120

Query: 121 FCRFDYNSTTGAFNPDRVAVYCKCEMPYNPDDLMVQCENCSDWFHPACIEMTTEEAKKLD 180
           FCRFDYNSTTGAFNPDRVAVYCKCEMPYNPDDLMVQCENCSDWFHPACIEMTTEEAKKLD
Sbjct: 121 FCRFDYNSTTGAFNPDRVAVYCKCEMPYNPDDLMVQCENCSDWFHPACIEMTTEEAKKLD 180

Query: 181 HFYCESCSSEGQKKLQNSQSTSKVAETKVDTKRRRR 217
           HFYCESCSSEGQKKLQNSQSTSKVAETKVDTKRRRR
Sbjct: 181 HFYCESCSSEGQKKLQNSQSTSKVAETKVDTKRRRR 216

[Close]

BLAST of CsaV3_7G000170 vs. TrEMBL
Match: tr|A0A1S3BJS6|A0A1S3BJS6_CUCME (chromatin remodeling protein SHL-like OS=Cucumis melo OX=3656 GN=LOC103490361 PE=4 SV=1)

HSP 1 Score: 417.2 bits (1071), Expect = 2.3e-113
Identity = 213/216 (98.61%), Postives = 214/216 (99.07%), Query Frame = 0


Query: 1   MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEXXXXXXXXXXXXXEADSRGANVKVH 60
           MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEXXXXXXXXXXXXXEADSRG NVKVH
Sbjct: 1   MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEXXXXXXXXXXXXXEADSRGGNVKVH 60

Query: 61  VRWYYRPEESIGGRRQFHGSKELFLSDHFDVQSADTIEGKCTVHTFKNYTKLDAVGNDDY 120
           VRWYYRPEESIGGRRQFHGSKELFLSDHFDVQSADTIEGKCTVHTFKNYTKLDAVGNDDY
Sbjct: 61  VRWYYRPEESIGGRRQFHGSKELFLSDHFDVQSADTIEGKCTVHTFKNYTKLDAVGNDDY 120

Query: 121 FCRFDYNSTTGAFNPDRVAVYCKCEMPYNPDDLMVQCENCSDWFHPACIEMTTEEAKKLD 180
           FCRFDYNSTTGAFNPDRVAVYCKCEMPYNPDDLMVQCE+CSDWFHPACIEMT EEAKKLD
Sbjct: 121 FCRFDYNSTTGAFNPDRVAVYCKCEMPYNPDDLMVQCESCSDWFHPACIEMTAEEAKKLD 180

Query: 181 HFYCESCSSEGQKKLQNSQSTSKVAETKVDTKRRRR 217
           HFYCESCSSEGQKKLQNSQSTSKVAETKVDTKRRRR
Sbjct: 181 HFYCESCSSEGQKKLQNSQSTSKVAETKVDTKRRRR 216

[Close]

BLAST of CsaV3_7G000170 vs. TrEMBL
Match: tr|A0A061DZT5|A0A061DZT5_THECC (PHD finger family protein / bromo-adjacent domain-containing protein isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_006822 PE=4 SV=1)

HSP 1 Score: 384.4 bits (986), Expect = 1.7e-103
Identity = 179/216 (82.87%), Postives = 196/216 (90.74%), Query Frame = 0


Query: 1   MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEXXXXXXXXXXXXXEADSRGANVKVH 60
           MAK KAPR+TLDSYTVK INKTIKAGDCVLMRP++             EAD+RG NVKVH
Sbjct: 1   MAKAKAPRRTLDSYTVKHINKTIKAGDCVLMRPADQSKPSYVARIERIEADARGGNVKVH 60

Query: 61  VRWYYRPEESIGGRRQFHGSKELFLSDHFDVQSADTIEGKCTVHTFKNYTKLDAVGNDDY 120
           VRWYYRPEESIGGRRQFHGSKE+FLSDH+DVQSADTIEGKCTVH+FK+YTKLDAVGNDD+
Sbjct: 61  VRWYYRPEESIGGRRQFHGSKEVFLSDHYDVQSADTIEGKCTVHSFKSYTKLDAVGNDDF 120

Query: 121 FCRFDYNSTTGAFNPDRVAVYCKCEMPYNPDDLMVQCENCSDWFHPACIEMTTEEAKKLD 180
           FCRF+YNS+TGAFNPDRVAVYCKCEMPYNPDDLMVQCE CSDWFHPACIEMT EEAK+LD
Sbjct: 121 FCRFEYNSSTGAFNPDRVAVYCKCEMPYNPDDLMVQCEGCSDWFHPACIEMTAEEAKRLD 180

Query: 181 HFYCESCSSEGQKKLQNSQSTSKVAETKVDTKRRRR 217
           HF+CESCSSEGQKKLQNS +TS+ ++TKVDTKRRRR
Sbjct: 181 HFFCESCSSEGQKKLQNSHATSRHSDTKVDTKRRRR 216

[Close]

BLAST of CsaV3_7G000170 vs. TrEMBL
Match: tr|A0A1S3U7Z6|A0A1S3U7Z6_VIGRR (chromatin structure-remodeling complex subunit RSC1 OS=Vigna radiata var. radiata OX=3916 GN=LOC106762610 PE=4 SV=1)

HSP 1 Score: 383.6 bits (984), Expect = 2.9e-103
Identity = 176/216 (81.48%), Postives = 197/216 (91.20%), Query Frame = 0


Query: 1   MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEXXXXXXXXXXXXXEADSRGANVKVH 60
           MAKPKAPR+TL+SY+VK INKTI+AGDCVLMRPS+             EAD+RGANVK+H
Sbjct: 1   MAKPKAPRRTLESYSVKHINKTIRAGDCVLMRPSDPAKPSYVARIERIEADARGANVKIH 60

Query: 61  VRWYYRPEESIGGRRQFHGSKELFLSDHFDVQSADTIEGKCTVHTFKNYTKLDAVGNDDY 120
           VRWYYRPEESIGGRRQFHGSKE+FLSDHFDVQS DTIEGKCTVH+FK+YTKLDAVGNDD+
Sbjct: 61  VRWYYRPEESIGGRRQFHGSKEVFLSDHFDVQSTDTIEGKCTVHSFKSYTKLDAVGNDDF 120

Query: 121 FCRFDYNSTTGAFNPDRVAVYCKCEMPYNPDDLMVQCENCSDWFHPACIEMTTEEAKKLD 180
           FCRF+YNS+TGAFNPDRVAVYCKCEMPYNPDDLMVQCE CSDWFHPACI+MT EEAK+LD
Sbjct: 121 FCRFEYNSSTGAFNPDRVAVYCKCEMPYNPDDLMVQCEGCSDWFHPACIDMTVEEAKRLD 180

Query: 181 HFYCESCSSEGQKKLQNSQSTSKVAETKVDTKRRRR 217
           HF+CESCS+EGQKKLQNS S S++++TKVDTKRRRR
Sbjct: 181 HFFCESCSAEGQKKLQNSHSASRLSDTKVDTKRRRR 216

[Close]

BLAST of CsaV3_7G000170 vs. TrEMBL
Match: tr|V7ATK2|V7ATK2_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_009G004500g PE=4 SV=1)

HSP 1 Score: 381.3 bits (978), Expect = 1.4e-102
Identity = 175/216 (81.02%), Postives = 196/216 (90.74%), Query Frame = 0


Query: 1   MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEXXXXXXXXXXXXXEADSRGANVKVH 60
           MAKPKAPR+TL+SY+VK I KTI+AGDCVLMRPS+             EAD+RGANVK+H
Sbjct: 1   MAKPKAPRRTLESYSVKHITKTIRAGDCVLMRPSDPGKPSYVARIERIEADARGANVKIH 60

Query: 61  VRWYYRPEESIGGRRQFHGSKELFLSDHFDVQSADTIEGKCTVHTFKNYTKLDAVGNDDY 120
           VRWYYRPEESIGGRRQFHGSKE+FLSDHFDVQS DTIEGKCTVH+FK+YTKLDAVGNDD+
Sbjct: 61  VRWYYRPEESIGGRRQFHGSKEVFLSDHFDVQSTDTIEGKCTVHSFKSYTKLDAVGNDDF 120

Query: 121 FCRFDYNSTTGAFNPDRVAVYCKCEMPYNPDDLMVQCENCSDWFHPACIEMTTEEAKKLD 180
           FCRF+YNS+TGAFNPDRVAVYCKCEMPYNPDDLMVQCE CSDWFHPACI+MT EEAK+LD
Sbjct: 121 FCRFEYNSSTGAFNPDRVAVYCKCEMPYNPDDLMVQCEGCSDWFHPACIDMTVEEAKRLD 180

Query: 181 HFYCESCSSEGQKKLQNSQSTSKVAETKVDTKRRRR 217
           HF+CESCS+EGQKKLQNS S S++++TKVDTKRRRR
Sbjct: 181 HFFCESCSAEGQKKLQNSHSASRLSDTKVDTKRRRR 216

The following BLAST results are available for this feature:

BLAST of CsaV3_7G000170 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011658548.1	8.4e-115	100.00	PREDICTED: protein winged eye-like [Cucumis sativus] >KGN43157.1 hypothetical pr...	[more]
XP_008448075.2	3.5e-113	98.61	PREDICTED: chromatin remodeling protein SHL-like [Cucumis melo]	[more]
XP_022135772.1	2.8e-110	95.37	chromatin remodeling protein SHL-like [Momordica charantia]	[more]
XP_022924958.1	9.9e-108	93.98	chromatin remodeling protein SHL-like isoform X1 [Cucurbita moschata] >XP_022924...	[more]
XP_023529360.1	9.9e-108	93.98	chromatin remodeling protein SHL-like isoform X3 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsaV3_7G000170 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G39100.1	9.3e-84	68.08	PHD finger family protein / bromo-adjacent homology (BAH) domain-containing prot...	[more]
AT4G22140.1	1.1e-81	67.46	PHD finger family protein / bromo-adjacent homology (BAH) domain-containing prot...	[more]
AT4G04260.1	3.1e-55	58.92	Bromo-adjacent homology (BAH) domain-containing protein	[more]
AT4G14700.1	2.7e-06	29.33	origin recognition complex 1	[more]
AT4G12620.1	3.5e-06	30.43	origin of replication complex 1B	[more]

BLAST of CsaV3_7G000170 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9FEN9\|SHL_ARATH	1.7e-82	68.08	Chromatin remodeling protein SHL OS=Arabidopsis thaliana OX=3702 GN=SHL PE=1 SV=...	[more]
sp\|F4JL28\|EBS_ARATH	2.1e-80	67.46	Chromatin remodeling protein EBS OS=Arabidopsis thaliana OX=3702 GN=EBS PE=1 SV=...	[more]
sp\|F4JGB7\|EBSL_ARATH	2.4e-57	60.00	Chromatin remodeling protein At4g04260 OS=Arabidopsis thaliana OX=3702 GN=At4g04...	[more]
sp\|Q6P949\|PHF2_DANRE	9.4e-09	35.82	Lysine-specific demethylase phf2 OS=Danio rerio OX=7955 GN=phf2 PE=2 SV=3	[more]
sp\|E6ZGB4\|PHF2_DICLA	2.1e-08	34.33	Lysine-specific demethylase phf2 OS=Dicentrarchus labrax OX=13489 GN=phf2 PE=3 S...	[more]

BLAST of CsaV3_7G000170 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0K4E7\|A0A0A0K4E7_CUCSA	5.5e-115	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G004100 PE=4 SV=1	[more]
tr\|A0A1S3BJS6\|A0A1S3BJS6_CUCME	2.3e-113	98.61	chromatin remodeling protein SHL-like OS=Cucumis melo OX=3656 GN=LOC103490361 PE...	[more]
tr\|A0A061DZT5\|A0A061DZT5_THECC	1.7e-103	82.87	PHD finger family protein / bromo-adjacent domain-containing protein isoform 1 O...	[more]
tr\|A0A1S3U7Z6\|A0A1S3U7Z6_VIGRR	2.9e-103	81.48	chromatin structure-remodeling complex subunit RSC1 OS=Vigna radiata var. radiat...	[more]
tr\|V7ATK2\|V7ATK2_PHAVU	1.4e-102	81.02	Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_009G004500g PE=4 ...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003682	chromatin binding

Vocabulary: **INTERPRO**
Term	Definition
IPR011011	Znf_FYVE_PHD
IPR019786	Zinc_finger_PHD-type_CS
IPR019787	Znf_PHD-finger
IPR001965	Znf_PHD
IPR001025	BAH_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0009791	post-embryonic development
cellular_component	GO:0000785	chromatin
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003682	chromatin binding
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0046872	metal ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_7G000170.1	CsaV3_7G000170.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001025	Bromo adjacent homology (BAH) domain	SMART	SM00439	BAH_4	coord: 21..137 e-value: 7.8E-43 score: 158.3
IPR001025	Bromo adjacent homology (BAH) domain	PFAM	PF01426	BAH	coord: 22..136 e-value: 2.8E-22 score: 78.7
IPR001025	Bromo adjacent homology (BAH) domain	PROSITE	PS51038	BAH	coord: 21..137 score: 23.853
IPR001965	Zinc finger, PHD-type	SMART	SM00249	PHD_3	coord: 141..188 e-value: 4.2E-9 score: 46.3
None	No IPR available	GENE3D	G3DSA:2.60.120.650		coord: 141..216 e-value: 1.4E-18 score: 69.1
None	No IPR available	GENE3D	G3DSA:2.30.30.490		coord: 2..140 e-value: 1.4E-32 score: 114.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 190..205
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 190..216
None	No IPR available	PANTHER	PTHR12505	PHD FINGER TRANSCRIPTION FACTOR	coord: 3..53 coord: 56..203
None	No IPR available	PANTHER	PTHR12505:SF39	CHROMATIN REMODELING PROTEIN EBS-RELATED	coord: 3..53
None	No IPR available	PANTHER	PTHR12505:SF39	CHROMATIN REMODELING PROTEIN EBS-RELATED	coord: 56..203
IPR019787	Zinc finger, PHD-finger	PFAM	PF00628	PHD	coord: 141..189 e-value: 2.7E-10 score: 39.9
IPR019787	Zinc finger, PHD-finger	PROSITE	PS50016	ZF_PHD_2	coord: 139..190 score: 9.259
IPR019786	Zinc finger, PHD-type, conserved site	PROSITE	PS01359	ZF_PHD_1	coord: 142..187
IPR011011	Zinc finger, FYVE/PHD-type	SUPERFAMILY	SSF57903	FYVE/PHD zinc finger	coord: 131..193

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_7G000170	CSPI07G00210	Wild cucumber (PI 183967)	cpicucB415
CsaV3_7G000170	Cucsa.377780	Cucumber (Gy14) v1	cgycucB572
CsaV3_7G000170	CmaCh11G010910	Cucurbita maxima (Rimu)	cmacucB0177
CsaV3_7G000170	CmoCh11G011150	Cucurbita moschata (Rifu)	cmocucB0161
CsaV3_7G000170	Cp4.1LG04g00940	Cucurbita pepo (Zucchini)	cpecucB0869
CsaV3_7G000170	Cp4.1LG15g05530	Cucurbita pepo (Zucchini)	cpecucB0322
CsaV3_7G000170	CsGy7G000180	Cucumber (Gy14) v2	cgybcucB348
CsaV3_7G000170	Carg24678	Silver-seed gourd	carcucB0201
CsaV3_7G000170	Carg19395	Silver-seed gourd	carcucB0347
CsaV3_7G000170	Cla015903	Watermelon (97103) v1	cucwmB634
CsaV3_7G000170	MELO3C013440	Melon (DHL92) v3.5.1	cucmeB549
CsaV3_7G000170	ClCG02G004750	Watermelon (Charleston Gray)	cucwcgB571
CsaV3_7G000170	Lsi11G011250	Bottle gourd (USVL1VR-Ls)	cuclsiB529
CsaV3_7G000170	MELO3C013440.2	Melon (DHL92) v3.6.1	cucmedB537
CsaV3_7G000170	Cla97C02G031720	Watermelon (97103) v2	cucwmbB549
CsaV3_7G000170	Bhi05G001541	Wax gourd	cucwgoB691

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_7G000170	Cucumber (Chinese Long) v3	cuccucB098
CsaV3_7G000170	Silver-seed gourd	carcucB1026
CsaV3_7G000170	Cucumber (Gy14) v2	cgybcucB093
CsaV3_7G000170	Cucumber (Gy14) v1	cgycucB141
CsaV3_7G000170	Cucurbita maxima (Rimu)	cmacucB0638
CsaV3_7G000170	Cucurbita maxima (Rimu)	cmacucB0689
CsaV3_7G000170	Cucurbita maxima (Rimu)	cmacucB0769
CsaV3_7G000170	Cucurbita maxima (Rimu)	cmacucB0958
CsaV3_7G000170	Cucurbita moschata (Rifu)	cmocucB0622
CsaV3_7G000170	Cucurbita moschata (Rifu)	cmocucB0674
CsaV3_7G000170	Cucurbita moschata (Rifu)	cmocucB0757
CsaV3_7G000170	Cucurbita pepo (Zucchini)	cpecucB0139
CsaV3_7G000170	Cucurbita pepo (Zucchini)	cpecucB0371
CsaV3_7G000170	Cucurbita pepo (Zucchini)	cpecucB0947
CsaV3_7G000170	Cucurbita pepo (Zucchini)	cpecucB1042
CsaV3_7G000170	Wild cucumber (PI 183967)	cpicucB118
CsaV3_7G000170	Bottle gourd (USVL1VR-Ls)	cuclsiB524
CsaV3_7G000170	Melon (DHL92) v3.5.1	cucmeB530
CsaV3_7G000170	Melon (DHL92) v3.6.1	cucmedB518
CsaV3_7G000170	Watermelon (Charleston Gray)	cucwcgB558
CsaV3_7G000170	Watermelon (97103) v1	cucwmB640
CsaV3_7G000170	Watermelon (97103) v2	cucwmbB539
CsaV3_7G000170	Wax gourd	cucwgoB692
CsaV3_7G000170	Wax gourd	cucwgoB706