CsaV3_6G053110 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_6G053110
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionTranscription factor Myb
Locationchr6 : 30992283 .. 30993599 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATCAAAGTAGGGGATTAATTATTATACTGTTTCCTGAGTTAAAATGGAATATATATTGGACAAATTGGAGATTTCCATGCCAGCACTATAAAGGCGGAGGGCTAGAGATATACAAAATTTAATAAGCTAACCATTGATTTGGATCAAGAGAAGAGTAATGTAATTTAATCAAGGAGACGATGAAGAAGGTGAAGAGAGGATTGTGGTCTCCTGAAGAAGACGAGAAGCTAGTAAAGTGTATGAAGAGGATATTGAGTAGTGATGGGGCGCAAGCGGCATGTTGGAGTCGTGTGCCTAAAATGGCAGGGCTTGAGAGATGTGGAAAGAGCTGCAGGTTGCGGTGGATAAACTACTTGAGGCCGGATCTTAAAAGAGGTTGTTTCAGTGCAGAGGAGGAAAGGACAATCATTGACGTTCACCGTATTCTAGGCAACAGATGGGCTCAAATAGCCAAACATCTCCCTGGGAGAACCGACAATGAGATTAAGAATTTTTGGAATTCCTCCATAAAAAAGAAACTTATTGCTCAGGGTCTTGATCCTACTACCCACAATCTCCTCCCTGCATCTACTACCAATACTATTTACAATCATCATCAATCAATTATAATTTCTCAATCCCCTGTCACCTCCAACAACAATAATAATACAACCTACTTAACTACTTCGTTGCCCCTACCCATGAACTTTGAACATCATCATCTAGGTATGAACGAAAACAATAATATTATTGATGATAGCAGTGAGGCGTTGCAGAGGAATAATACGTTGGAGAAAGACAATGATGACAATGGCGTGGGTATGGTTGCAGAATATCAACTGGAAATGGGGTATAGAGAGCTCAATAACAATGTTATGATGAGGCAGCAGCTCCAACATGATGTTGATGTTCATGATTATAAAACCACATGTCACAATAGTACTACCACTGTTGTTGAGTTTCACGATTTTGATTTCTATTTTGAGGACTCGACACCCATGTCAAATATTCCGCCAAATTCCATCCTTACCAATTATACTTCTTCGTCCAATAATTTTCAATTTGCTTAGCTAGCTAGCTAGATTGGCTACCTTTTAATTTACGACCGTTGTTATTATTCATTAATTACCTTTTGTCCATAATGAATCCAATCTCGGTCATCATCTACTATATTATACATGTCATGCTTGTATGGATGTACCTCATAAATATAATGTACGTTATATTATATATATTCATTTTCTTTTCTTCCCTATTCTCTTTATATCTTCTTCAATTCTTTCTCAATATTGTTCGTATAATAATCTAATTTACATGAATGAAACTTCTTCCTTTCAA

mRNA sequence

ATGAAGAAGGTGAAGAGAGGATTGTGGTCTCCTGAAGAAGACGAGAAGCTAGTAAAGTGTATGAAGAGGATATTGAGTAGTGATGGGGCGCAAGCGGCATGTTGGAGTCGTGTGCCTAAAATGGCAGGGCTTGAGAGATGTGGAAAGAGCTGCAGGTTGCGGTGGATAAACTACTTGAGGCCGGATCTTAAAAGAGGTTGTTTCAGTGCAGAGGAGGAAAGGACAATCATTGACGTTCACCGTATTCTAGGCAACAGATGGGCTCAAATAGCCAAACATCTCCCTGGGAGAACCGACAATGAGATTAAGAATTTTTGGAATTCCTCCATAAAAAAGAAACTTATTGCTCAGGGTCTTGATCCTACTACCCACAATCTCCTCCCTGCATCTACTACCAATACTATTTACAATCATCATCAATCAATTATAATTTCTCAATCCCCTGTCACCTCCAACAACAATAATAATACAACCTACTTAACTACTTCGTTGCCCCTACCCATGAACTTTGAACATCATCATCTAGGTATGAACGAAAACAATAATATTATTGATGATAGCAGTGAGGCGTTGCAGAGGAATAATACGTTGGAGAAAGACAATGATGACAATGGCGTGGGTATGGTTGCAGAATATCAACTGGAAATGGGGTATAGAGAGCTCAATAACAATGTTATGATGAGGCAGCAGCTCCAACATGATGTTGATGTTCATGATTATAAAACCACATGTCACAATAGTACTACCACTGTTGTTGAGTTTCACGATTTTGATTTCTATTTTGAGGACTCGACACCCATGTCAAATATTCCGCCAAATTCCATCCTTACCAATTATACTTCTTCGTCCAATAATTTTCAATTTGCTTAG

Coding sequence (CDS)

ATGAAGAAGGTGAAGAGAGGATTGTGGTCTCCTGAAGAAGACGAGAAGCTAGTAAAGTGTATGAAGAGGATATTGAGTAGTGATGGGGCGCAAGCGGCATGTTGGAGTCGTGTGCCTAAAATGGCAGGGCTTGAGAGATGTGGAAAGAGCTGCAGGTTGCGGTGGATAAACTACTTGAGGCCGGATCTTAAAAGAGGTTGTTTCAGTGCAGAGGAGGAAAGGACAATCATTGACGTTCACCGTATTCTAGGCAACAGATGGGCTCAAATAGCCAAACATCTCCCTGGGAGAACCGACAATGAGATTAAGAATTTTTGGAATTCCTCCATAAAAAAGAAACTTATTGCTCAGGGTCTTGATCCTACTACCCACAATCTCCTCCCTGCATCTACTACCAATACTATTTACAATCATCATCAATCAATTATAATTTCTCAATCCCCTGTCACCTCCAACAACAATAATAATACAACCTACTTAACTACTTCGTTGCCCCTACCCATGAACTTTGAACATCATCATCTAGGTATGAACGAAAACAATAATATTATTGATGATAGCAGTGAGGCGTTGCAGAGGAATAATACGTTGGAGAAAGACAATGATGACAATGGCGTGGGTATGGTTGCAGAATATCAACTGGAAATGGGGTATAGAGAGCTCAATAACAATGTTATGATGAGGCAGCAGCTCCAACATGATGTTGATGTTCATGATTATAAAACCACATGTCACAATAGTACTACCACTGTTGTTGAGTTTCACGATTTTGATTTCTATTTTGAGGACTCGACACCCATGTCAAATATTCCGCCAAATTCCATCCTTACCAATTATACTTCTTCGTCCAATAATTTTCAATTTGCTTAG

Protein sequence

MKKVKRGLWSPEEDEKLVKCMKRILSSDGAQAACWSRVPKMAGLERCGKSCRLRWINYLRPDLKRGCFSAEEERTIIDVHRILGNRWAQIAKHLPGRTDNEIKNFWNSSIKKKLIAQGLDPTTHNLLPASTTNTIYNHHQSIIISQSPVTSNNNNNTTYLTTSLPLPMNFEHHHLGMNENNNIIDDSSEALQRNNTLEKDNDDNGVGMVAEYQLEMGYRELNNNVMMRQQLQHDVDVHDYKTTCHNSTTTVVEFHDFDFYFEDSTPMSNIPPNSILTNYTSSSNNFQFA
Homology
[Close]
BLAST of CsaV3_6G053110 vs. NCBI nr
Match: XP_011658528.1 (PREDICTED: transcription repressor MYB6-like [Cucumis sativus] >KGN49541.1 hypothetical protein Csa_6G538700 [Cucumis sativus])

HSP 1 Score: 429.9 bits (1104), Expect = 7.0e-117
Identity = 289/289 (100.00%), Postives = 289/289 (100.00%), Query Frame = 0 

Query: 1   MKKVKRGLWSPEEDEKLVKCMKRILSSDGAQAACWSRVPKMAGLERCGKSCRLRWINYLR 60
           MKKVKRGLWSPEEDEKLVKCMKRILSSDGAQAACWSRVPKMAGLERCGKSCRLRWINYLR
Sbjct: 1   MKKVKRGLWSPEEDEKLVKCMKRILSSDGAQAACWSRVPKMAGLERCGKSCRLRWINYLR 60

Query: 61  PDLKRGCFSAEEERTIIDVHRILGNRWAQIAKHLPGRTDNEIKNFWNSSIKKKLIAQGLD 120
           PDLKRGCFSAEEERTIIDVHRILGNRWAQIAKHLPGRTDNEIKNFWNSSIKKKLIAQGLD
Sbjct: 61  PDLKRGCFSAEEERTIIDVHRILGNRWAQIAKHLPGRTDNEIKNFWNSSIKKKLIAQGLD 120

Query: 121 PTTHNLLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           PTTHNLLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 PTTHNLLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXDNDDNGVGMVAEYQLEMGYRELNNNVMMRQQLQHDVDVHDY 240
           XXXXXXXXXXXXXXXXXXXDNDDNGVGMVAEYQLEMGYRELNNNVMMRQQLQHDVDVHDY
Sbjct: 181 XXXXXXXXXXXXXXXXXXXDNDDNGVGMVAEYQLEMGYRELNNNVMMRQQLQHDVDVHDY 240

Query: 241 KTTCHNSTTTVVEFHDFDFYFEDSTPMSNIPPNSILTNYTSSSNNFQFA 290
           KTTCHNSTTTVVEFHDFDFYFEDSTPMSNIPPNSILTNYTSSSNNFQFA
Sbjct: 241 KTTCHNSTTTVVEFHDFDFYFEDSTPMSNIPPNSILTNYTSSSNNFQFA 289

[Close]
BLAST of CsaV3_6G053110 vs. NCBI nr
Match: XP_008439425.2 (PREDICTED: transcription repressor MYB5-like [Cucumis melo])

HSP 1 Score: 364.8 bits (935), Expect = 2.8e-97
Identity = 219/292 (75.00%), Postives = 230/292 (78.77%), Query Frame = 0 

Query: 1   MKKVKRGLWSPEEDEKLVKCMKRILSSDGAQAACWSRVPKMAGLERCGKSCRLRWINYLR 60
           +KKVKRGLWSPEEDEKL+KCMK+ILSSDGAQAACWSRVPKMAGLERCGKSCRLRWINYLR
Sbjct: 2   VKKVKRGLWSPEEDEKLIKCMKKILSSDGAQAACWSRVPKMAGLERCGKSCRLRWINYLR 61

Query: 61  PDLKRGCFSAEEERTIIDVHRILGNRWAQIAKHLPGRTDNEIKNFWNSSIKKKLIAQGLD 120
           PDLKRGCFSAEEERTIIDVHRILGNRWAQIAKHLPGRTDNEIKNFWNSSIKKKL+AQGLD
Sbjct: 62  PDLKRGCFSAEEERTIIDVHRILGNRWAQIAKHLPGRTDNEIKNFWNSSIKKKLLAQGLD 121

Query: 121 PTTHNLLP-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           PTTHNLLP                                             XXXXXXX
Sbjct: 122 PTTHNLLPVSTINTVYNHHHQPIIIPQSPVTSNYNNKTTYLTTPLPLPMNFEHXXXXXXX 181

Query: 181 XXXXXXXXXXXXXXXXXXXXDNDDNGVGMVAEYQLEMGYRELNNNVMMRQQLQHDV--DV 240
           XXXXXXXXXXXXXXXXXXXX NDDN VGMVAEYQL MG RE+NNNVMM QQLQHD+  D 
Sbjct: 182 XXXXXXXXXXXXXXXXXXXXXNDDNSVGMVAEYQLGMGNREINNNVMMMQQLQHDIDGDG 241

Query: 241 HDYKTTCHNSTTTVVEFHDFDFYFEDSTP-MSNIPPNSILTNYTSSSNNFQF 289
            +Y+TTCH+ST+TVVEFHDFDFYFEDS   M NIPPNS+LT Y  SSN FQF
Sbjct: 242 DNYETTCHSSTSTVVEFHDFDFYFEDSMALMPNIPPNSLLTTYPYSSNQFQF 293

[Close]
BLAST of CsaV3_6G053110 vs. NCBI nr
Match: XP_023518177.1 (transcription factor MYB20-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 238.0 bits (606), Expect = 3.9e-59
Identity = 110/126 (87.30%), Postives = 116/126 (92.06%), Query Frame = 0 

Query: 3   KVKRGLWSPEEDEKLVKCMKRILSSDGAQAACWSRVPKMAGLERCGKSCRLRWINYLRPD 62
           KVKRGLWSPEEDEKL+KC+++I        ACWSRVPKMAGL+RCGKSCRLRWINYLRPD
Sbjct: 11  KVKRGLWSPEEDEKLIKCIRKIEGQ-----ACWSRVPKMAGLDRCGKSCRLRWINYLRPD 70

Query: 63  LKRGCFSAEEERTIIDVHRILGNRWAQIAKHLPGRTDNEIKNFWNSSIKKKLIAQGLDPT 122
           LKRGCFSAEEERTIIDVHRILGNRWAQIAKHLPGRTDNEIKNFWNSSIKKKL+A GLDP 
Sbjct: 71  LKRGCFSAEEERTIIDVHRILGNRWAQIAKHLPGRTDNEIKNFWNSSIKKKLLALGLDPN 130

Query: 123 THNLLP 129
           THNLLP
Sbjct: 131 THNLLP 131

[Close]
BLAST of CsaV3_6G053110 vs. NCBI nr
Match: XP_022926820.1 (protein ODORANT1-like [Cucurbita moschata])

HSP 1 Score: 237.3 bits (604), Expect = 6.7e-59
Identity = 110/126 (87.30%), Postives = 116/126 (92.06%), Query Frame = 0 

Query: 3   KVKRGLWSPEEDEKLVKCMKRILSSDGAQAACWSRVPKMAGLERCGKSCRLRWINYLRPD 62
           KVKRGLWSPEEDEKL+KC+++I        ACWSRVPKMAGL+RCGKSCRLRWINYLRPD
Sbjct: 11  KVKRGLWSPEEDEKLMKCIRKIEGQ-----ACWSRVPKMAGLDRCGKSCRLRWINYLRPD 70

Query: 63  LKRGCFSAEEERTIIDVHRILGNRWAQIAKHLPGRTDNEIKNFWNSSIKKKLIAQGLDPT 122
           LKRGCFSAEEERTIIDVHRILGNRWAQIAKHLPGRTDNEIKNFWNSSIKKKL+A GLDP 
Sbjct: 71  LKRGCFSAEEERTIIDVHRILGNRWAQIAKHLPGRTDNEIKNFWNSSIKKKLLALGLDPN 130

Query: 123 THNLLP 129
           THNLLP
Sbjct: 131 THNLLP 131

[Close]
BLAST of CsaV3_6G053110 vs. NCBI nr
Match: XP_023003550.1 (transcription factor MYB13-like [Cucurbita maxima])

HSP 1 Score: 237.3 bits (604), Expect = 6.7e-59
Identity = 110/126 (87.30%), Postives = 116/126 (92.06%), Query Frame = 0 

Query: 3   KVKRGLWSPEEDEKLVKCMKRILSSDGAQAACWSRVPKMAGLERCGKSCRLRWINYLRPD 62
           KVKRGLWSPEEDEKL+KC+++I        ACWSRVPKMAGL+RCGKSCRLRWINYLRPD
Sbjct: 11  KVKRGLWSPEEDEKLMKCIRKIEGQ-----ACWSRVPKMAGLDRCGKSCRLRWINYLRPD 70

Query: 63  LKRGCFSAEEERTIIDVHRILGNRWAQIAKHLPGRTDNEIKNFWNSSIKKKLIAQGLDPT 122
           LKRGCFSAEEERTIIDVHRILGNRWAQIAKHLPGRTDNEIKNFWNSSIKKKL+A GLDP 
Sbjct: 71  LKRGCFSAEEERTIIDVHRILGNRWAQIAKHLPGRTDNEIKNFWNSSIKKKLLALGLDPN 130

Query: 123 THNLLP 129
           THNLLP
Sbjct: 131 THNLLP 131

[Close]
BLAST of CsaV3_6G053110 vs. TAIR10
Match: AT3G12720.1 (myb domain protein 67)

HSP 1 Score: 207.2 bits (526), Expect = 1.3e-53
Identity = 95/126 (75.40%), Postives = 111/126 (88.10%), Query Frame = 0 

Query: 3   KVKRGLWSPEEDEKLVKCMKRILSSDGAQAACWSRVPKMAGLERCGKSCRLRWINYLRPD 62
           KVKRGLWSPEEDEKL+    R +++ G  +  WS VPK+AGL+RCGKSCRLRWINYLRPD
Sbjct: 21  KVKRGLWSPEEDEKLL----RYITTHGHPS--WSSVPKLAGLQRCGKSCRLRWINYLRPD 80

Query: 63  LKRGCFSAEEERTIIDVHRILGNRWAQIAKHLPGRTDNEIKNFWNSSIKKKLIAQGLDPT 122
           L+RG F+ EEE+ IIDVHRILGN+WAQIAKHLPGRTDNE+KNFWNS IKKKL++QGLDP+
Sbjct: 81  LRRGSFNEEEEQIIIDVHRILGNKWAQIAKHLPGRTDNEVKNFWNSCIKKKLLSQGLDPS 140

Query: 123 THNLLP 129
           THNL+P
Sbjct: 141 THNLMP 140

[Close]
BLAST of CsaV3_6G053110 vs. TAIR10
Match: AT1G09540.1 (myb domain protein 61)

HSP 1 Score: 183.0 bits (463), Expect = 2.7e-46
Identity = 83/123 (67.48%), Postives = 100/123 (81.30%), Query Frame = 0 

Query: 2   KKVKRGLWSPEEDEKLVKCMKRILSSDGAQAACWSRVPKMAGLERCGKSCRLRWINYLRP 61
           +K+++GLWSPEEDEKL+      +++ G    CWS VPK+AGL+RCGKSCRLRWINYLRP
Sbjct: 10  QKLRKGLWSPEEDEKLL----THITNHG--HGCWSSVPKLAGLQRCGKSCRLRWINYLRP 69

Query: 62  DLKRGCFSAEEERTIIDVHRILGNRWAQIAKHLPGRTDNEIKNFWNSSIKKKLIAQGLDP 121
           DLKRG FS EEE  I+++H +LGNRW+QIA  LPGRTDNEIKN WNSSIKKKL  +G+DP
Sbjct: 70  DLKRGAFSPEEENLIVELHAVLGNRWSQIASRLPGRTDNEIKNLWNSSIKKKLKQRGIDP 126

Query: 122 TTH 125
            TH
Sbjct: 130 NTH 126

[Close]
BLAST of CsaV3_6G053110 vs. TAIR10
Match: AT1G57560.1 (myb domain protein 50)

HSP 1 Score: 182.6 bits (462), Expect = 3.5e-46
Identity = 82/126 (65.08%), Postives = 100/126 (79.37%), Query Frame = 0 

Query: 2   KKVKRGLWSPEEDEKLVKCMKRILSSDGAQAACWSRVPKMAGLERCGKSCRLRWINYLRP 61
           +K+++GLWSPEEDEKL+  + +          CWS VPK+AGLERCGKSCRLRWINYLRP
Sbjct: 10  QKLRKGLWSPEEDEKLLNYITK------HGHGCWSSVPKLAGLERCGKSCRLRWINYLRP 69

Query: 62  DLKRGCFSAEEERTIIDVHRILGNRWAQIAKHLPGRTDNEIKNFWNSSIKKKLIAQGLDP 121
           DLKRG FS+EE+  I+++H +LGNRW+QIA  LPGRTDNEIKN WNS IKKKL+ +G+DP
Sbjct: 70  DLKRGAFSSEEQNLIVELHAVLGNRWSQIAARLPGRTDNEIKNLWNSCIKKKLMKKGIDP 129

Query: 122 TTHNLL 128
            TH  L
Sbjct: 130 ITHKPL 129

[Close]
BLAST of CsaV3_6G053110 vs. TAIR10
Match: AT5G26660.1 (myb domain protein 86)

HSP 1 Score: 182.6 bits (462), Expect = 3.5e-46
Identity = 84/126 (66.67%), Postives = 99/126 (78.57%), Query Frame = 0 

Query: 2   KKVKRGLWSPEEDEKLVKCMKRILSSDGAQAACWSRVPKMAGLERCGKSCRLRWINYLRP 61
           +K+++GLWSPEEDEKL+  + R          CWS VPK+AGL+RCGKSCRLRWINYLRP
Sbjct: 10  QKLRKGLWSPEEDEKLLNYITR------HGHGCWSSVPKLAGLQRCGKSCRLRWINYLRP 69

Query: 62  DLKRGCFSAEEERTIIDVHRILGNRWAQIAKHLPGRTDNEIKNFWNSSIKKKLIAQGLDP 121
           DLKRG FS +EE  II++H  LGNRW+QIA  LPGRTDNEIKNFWNS +KKKL  +G+DP
Sbjct: 70  DLKRGAFSQDEESLIIELHAALGNRWSQIATRLPGRTDNEIKNFWNSCLKKKLRRKGIDP 129

Query: 122 TTHNLL 128
           TTH  L
Sbjct: 130 TTHKPL 129

[Close]
BLAST of CsaV3_6G053110 vs. TAIR10
Match: AT4G01680.2 (myb domain protein 55)

HSP 1 Score: 173.7 bits (439), Expect = 1.6e-43
Identity = 82/138 (59.42%), Postives = 99/138 (71.74%), Query Frame = 0 

Query: 2   KKVKRGLWSPEEDEKLVKCMKRILSSDGAQAACWSRVPKMA------------GLERCGK 61
           +K+++GLWSPEEDEKL++ + +          CWS VPK A            GL+RCGK
Sbjct: 10  QKLRKGLWSPEEDEKLLRYITKY------GHGCWSSVPKQAGTFLFIQIHLLFGLQRCGK 69

Query: 62  SCRLRWINYLRPDLKRGCFSAEEERTIIDVHRILGNRWAQIAKHLPGRTDNEIKNFWNSS 121
           SCRLRWINYLRPDLKRG FS +EE  II++H +LGNRW+QIA  LPGRTDNEIKN WNS 
Sbjct: 70  SCRLRWINYLRPDLKRGAFSQDEENLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSC 129

Query: 122 IKKKLIAQGLDPTTHNLL 128
           +KKKL  +G+DP TH LL
Sbjct: 130 LKKKLRLRGIDPVTHKLL 141

[Close]
BLAST of CsaV3_6G053110 vs. Swiss-Prot
Match: sp|P20027|MYB3_HORVU (Myb-related protein Hv33 OS=Hordeum vulgare OX=4513 GN=MYB2 PE=2 SV=3)

HSP 1 Score: 185.3 bits (469), Expect = 9.8e-46
Identity = 85/122 (69.67%), Postives = 96/122 (78.69%), Query Frame = 0 

Query: 3   KVKRGLWSPEEDEKLVKCMKRILSSDGAQAACWSRVPKMAGLERCGKSCRLRWINYLRPD 62
           KV++GLWSPEEDEKL   + R          CWS VP++A L RCGKSCRLRWINYLRPD
Sbjct: 13  KVRKGLWSPEEDEKLYNHIIR------HGVGCWSSVPRLAALNRCGKSCRLRWINYLRPD 72

Query: 63  LKRGCFSAEEERTIIDVHRILGNRWAQIAKHLPGRTDNEIKNFWNSSIKKKLIAQGLDPT 122
           LKRGCFS +EE  I+ +H+ILGNRW+QIA HLPGRTDNEIKNFWNS IKKKL  QG+DP 
Sbjct: 73  LKRGCFSQQEEDHIVALHQILGNRWSQIASHLPGRTDNEIKNFWNSCIKKKLRQQGIDPA 128

Query: 123 TH 125
           TH
Sbjct: 133 TH 128

[Close]
BLAST of CsaV3_6G053110 vs. Swiss-Prot
Match: sp|Q8VZQ2|MYB61_ARATH (Transcription factor MYB61 OS=Arabidopsis thaliana OX=3702 GN=MYB61 PE=2 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 4.9e-45
Identity = 83/123 (67.48%), Postives = 100/123 (81.30%), Query Frame = 0 

Query: 2   KKVKRGLWSPEEDEKLVKCMKRILSSDGAQAACWSRVPKMAGLERCGKSCRLRWINYLRP 61
           +K+++GLWSPEEDEKL+      +++ G    CWS VPK+AGL+RCGKSCRLRWINYLRP
Sbjct: 10  QKLRKGLWSPEEDEKLL----THITNHG--HGCWSSVPKLAGLQRCGKSCRLRWINYLRP 69

Query: 62  DLKRGCFSAEEERTIIDVHRILGNRWAQIAKHLPGRTDNEIKNFWNSSIKKKLIAQGLDP 121
           DLKRG FS EEE  I+++H +LGNRW+QIA  LPGRTDNEIKN WNSSIKKKL  +G+DP
Sbjct: 70  DLKRGAFSPEEENLIVELHAVLGNRWSQIASRLPGRTDNEIKNLWNSSIKKKLKQRGIDP 126

Query: 122 TTH 125
            TH
Sbjct: 130 NTH 126

[Close]
BLAST of CsaV3_6G053110 vs. Swiss-Prot
Match: sp|Q8LPH6|MYB86_ARATH (Transcription factor MYB86 OS=Arabidopsis thaliana OX=3702 GN=MYB86 PE=2 SV=1)

HSP 1 Score: 182.6 bits (462), Expect = 6.4e-45
Identity = 84/126 (66.67%), Postives = 99/126 (78.57%), Query Frame = 0 

Query: 2   KKVKRGLWSPEEDEKLVKCMKRILSSDGAQAACWSRVPKMAGLERCGKSCRLRWINYLRP 61
           +K+++GLWSPEEDEKL+  + R          CWS VPK+AGL+RCGKSCRLRWINYLRP
Sbjct: 10  QKLRKGLWSPEEDEKLLNYITR------HGHGCWSSVPKLAGLQRCGKSCRLRWINYLRP 69

Query: 62  DLKRGCFSAEEERTIIDVHRILGNRWAQIAKHLPGRTDNEIKNFWNSSIKKKLIAQGLDP 121
           DLKRG FS +EE  II++H  LGNRW+QIA  LPGRTDNEIKNFWNS +KKKL  +G+DP
Sbjct: 70  DLKRGAFSQDEESLIIELHAALGNRWSQIATRLPGRTDNEIKNFWNSCLKKKLRRKGIDP 129

Query: 122 TTHNLL 128
           TTH  L
Sbjct: 130 TTHKPL 129

[Close]
BLAST of CsaV3_6G053110 vs. Swiss-Prot
Match: sp|Q9FJP2|MYB53_ARATH (Transcription factor MYB53 OS=Arabidopsis thaliana OX=3702 GN=MYB53 PE=1 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 6.6e-42
Identity = 76/121 (62.81%), Postives = 93/121 (76.86%), Query Frame = 0 

Query: 4   VKRGLWSPEEDEKLVKCMKRILSSDGAQAACWSRVPKMAGLERCGKSCRLRWINYLRPDL 63
           +K+G W PEED+KL+  + +   S       WS +PK+AGL RCGKSCRLRW NYLRPD+
Sbjct: 12  LKKGPWLPEEDDKLINYIHKHGHSS------WSALPKLAGLNRCGKSCRLRWTNYLRPDI 71

Query: 64  KRGCFSAEEERTIIDVHRILGNRWAQIAKHLPGRTDNEIKNFWNSSIKKKLIAQGLDPTT 123
           KRG FSAEEE TI+++H +LGN+W+ IA HLPGRTDNEIKNFWN+ +KKKLI  G DP T
Sbjct: 72  KRGKFSAEEEETILNLHAVLGNKWSMIASHLPGRTDNEIKNFWNTHLKKKLIQMGFDPMT 126

Query: 124 H 125
           H
Sbjct: 132 H 126

[Close]
BLAST of CsaV3_6G053110 vs. Swiss-Prot
Match: sp|Q9M2D9|MYB17_ARATH (Transcription factor MYB41 OS=Arabidopsis thaliana OX=3702 GN=MYB17 PE=1 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 3.6e-40
Identity = 76/125 (60.80%), Postives = 96/125 (76.80%), Query Frame = 0 

Query: 4   VKRGLWSPEEDEKLVKCMKRILSSDGAQAACWSRVPKMAGLERCGKSCRLRWINYLRPDL 63
           +K+G W+PEEDE LV  +K+  +  G+    W  +PK+AGL RCGKSCRLRW NYLRPD+
Sbjct: 12  LKKGPWTPEEDEVLVAHIKK--NGHGS----WRTLPKLAGLLRCGKSCRLRWTNYLRPDI 71

Query: 64  KRGCFSAEEERTIIDVHRILGNRWAQIAKHLPGRTDNEIKNFWNSSIKKKLIAQGLDPTT 123
           KRG F+A+EE+ +I +H ILGNRWA IA  LPGRTDNEIKN WN+ +KK+L++ GLDP T
Sbjct: 72  KRGPFTADEEKLVIQLHAILGNRWAAIAAQLPGRTDNEIKNLWNTHLKKRLLSMGLDPRT 130

Query: 124 HNLLP 129
           H  LP
Sbjct: 132 HEPLP 130

[Close]
BLAST of CsaV3_6G053110 vs. TrEMBL
Match: tr|A0A0A0KPD6|A0A0A0KPD6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G538700 PE=4 SV=1)

HSP 1 Score: 429.9 bits (1104), Expect = 4.6e-117
Identity = 289/289 (100.00%), Postives = 289/289 (100.00%), Query Frame = 0 

Query: 1   MKKVKRGLWSPEEDEKLVKCMKRILSSDGAQAACWSRVPKMAGLERCGKSCRLRWINYLR 60
           MKKVKRGLWSPEEDEKLVKCMKRILSSDGAQAACWSRVPKMAGLERCGKSCRLRWINYLR
Sbjct: 1   MKKVKRGLWSPEEDEKLVKCMKRILSSDGAQAACWSRVPKMAGLERCGKSCRLRWINYLR 60

Query: 61  PDLKRGCFSAEEERTIIDVHRILGNRWAQIAKHLPGRTDNEIKNFWNSSIKKKLIAQGLD 120
           PDLKRGCFSAEEERTIIDVHRILGNRWAQIAKHLPGRTDNEIKNFWNSSIKKKLIAQGLD
Sbjct: 61  PDLKRGCFSAEEERTIIDVHRILGNRWAQIAKHLPGRTDNEIKNFWNSSIKKKLIAQGLD 120

Query: 121 PTTHNLLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           PTTHNLLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 PTTHNLLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXDNDDNGVGMVAEYQLEMGYRELNNNVMMRQQLQHDVDVHDY 240
           XXXXXXXXXXXXXXXXXXXDNDDNGVGMVAEYQLEMGYRELNNNVMMRQQLQHDVDVHDY
Sbjct: 181 XXXXXXXXXXXXXXXXXXXDNDDNGVGMVAEYQLEMGYRELNNNVMMRQQLQHDVDVHDY 240

Query: 241 KTTCHNSTTTVVEFHDFDFYFEDSTPMSNIPPNSILTNYTSSSNNFQFA 290
           KTTCHNSTTTVVEFHDFDFYFEDSTPMSNIPPNSILTNYTSSSNNFQFA
Sbjct: 241 KTTCHNSTTTVVEFHDFDFYFEDSTPMSNIPPNSILTNYTSSSNNFQFA 289

[Close]
BLAST of CsaV3_6G053110 vs. TrEMBL
Match: tr|A0A1S3AZE1|A0A1S3AZE1_CUCME (transcription repressor MYB5-like OS=Cucumis melo OX=3656 GN=LOC103484237 PE=4 SV=1)

HSP 1 Score: 364.8 bits (935), Expect = 1.8e-97
Identity = 219/292 (75.00%), Postives = 230/292 (78.77%), Query Frame = 0 

Query: 1   MKKVKRGLWSPEEDEKLVKCMKRILSSDGAQAACWSRVPKMAGLERCGKSCRLRWINYLR 60
           +KKVKRGLWSPEEDEKL+KCMK+ILSSDGAQAACWSRVPKMAGLERCGKSCRLRWINYLR
Sbjct: 2   VKKVKRGLWSPEEDEKLIKCMKKILSSDGAQAACWSRVPKMAGLERCGKSCRLRWINYLR 61

Query: 61  PDLKRGCFSAEEERTIIDVHRILGNRWAQIAKHLPGRTDNEIKNFWNSSIKKKLIAQGLD 120
           PDLKRGCFSAEEERTIIDVHRILGNRWAQIAKHLPGRTDNEIKNFWNSSIKKKL+AQGLD
Sbjct: 62  PDLKRGCFSAEEERTIIDVHRILGNRWAQIAKHLPGRTDNEIKNFWNSSIKKKLLAQGLD 121

Query: 121 PTTHNLLP-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           PTTHNLLP                                             XXXXXXX
Sbjct: 122 PTTHNLLPVSTINTVYNHHHQPIIIPQSPVTSNYNNKTTYLTTPLPLPMNFEHXXXXXXX 181

Query: 181 XXXXXXXXXXXXXXXXXXXXDNDDNGVGMVAEYQLEMGYRELNNNVMMRQQLQHDV--DV 240
           XXXXXXXXXXXXXXXXXXXX NDDN VGMVAEYQL MG RE+NNNVMM QQLQHD+  D 
Sbjct: 182 XXXXXXXXXXXXXXXXXXXXXNDDNSVGMVAEYQLGMGNREINNNVMMMQQLQHDIDGDG 241

Query: 241 HDYKTTCHNSTTTVVEFHDFDFYFEDSTP-MSNIPPNSILTNYTSSSNNFQF 289
            +Y+TTCH+ST+TVVEFHDFDFYFEDS   M NIPPNS+LT Y  SSN FQF
Sbjct: 242 DNYETTCHSSTSTVVEFHDFDFYFEDSMALMPNIPPNSLLTTYPYSSNQFQF 293

[Close]
BLAST of CsaV3_6G053110 vs. TrEMBL
Match: tr|A0A2G5D2B3|A0A2G5D2B3_AQUCA (Uncharacterized protein OS=Aquilegia coerulea OX=218851 GN=AQUCO_03000294v1 PE=4 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 1.9e-54
Identity = 103/127 (81.10%), Postives = 114/127 (89.76%), Query Frame = 0 

Query: 2   KKVKRGLWSPEEDEKLVKCMKRILSSDGAQAACWSRVPKMAGLERCGKSCRLRWINYLRP 61
           +KVKRGLWSPEEDEKLVKC    +++ G   +CWS VPK+AGL+RCGKSCRLRWINYLRP
Sbjct: 9   QKVKRGLWSPEEDEKLVKC----INTHG--HSCWSAVPKLAGLQRCGKSCRLRWINYLRP 68

Query: 62  DLKRGCFSAEEERTIIDVHRILGNRWAQIAKHLPGRTDNEIKNFWNSSIKKKLIAQGLDP 121
           DLKRG FSA+EER IIDVHRILGNRWAQIAKHLPGRTDNE+KNFWNS IKKKL+AQGLDP
Sbjct: 69  DLKRGSFSAQEERIIIDVHRILGNRWAQIAKHLPGRTDNEVKNFWNSCIKKKLLAQGLDP 128

Query: 122 TTHNLLP 129
            THNL+P
Sbjct: 129 KTHNLMP 129

[Close]
BLAST of CsaV3_6G053110 vs. TrEMBL
Match: tr|A0A1S4A0C3|A0A1S4A0C3_TOBAC (transcription factor MYB86-like OS=Nicotiana tabacum OX=4097 GN=LOC107792344 PE=4 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 7.3e-54
Identity = 102/126 (80.95%), Postives = 113/126 (89.68%), Query Frame = 0 

Query: 2   KKVKRGLWSPEEDEKLVKCMKRILSSDGAQAACWSRVPKMAGLERCGKSCRLRWINYLRP 61
           +KVKRGLWSPEEDEKL+    R +++ G   +CWS VPK+AGL+RCGKSCRLRWINYLRP
Sbjct: 9   QKVKRGLWSPEEDEKLI----RHITTHG--HSCWSSVPKLAGLQRCGKSCRLRWINYLRP 68

Query: 62  DLKRGCFSAEEERTIIDVHRILGNRWAQIAKHLPGRTDNEIKNFWNSSIKKKLIAQGLDP 121
           DLKRGCFS +EERTIIDVHRILGNRWAQIAKHLPGRTDNE+KNFWNS+IKKKLIAQG DP
Sbjct: 69  DLKRGCFSEQEERTIIDVHRILGNRWAQIAKHLPGRTDNEVKNFWNSAIKKKLIAQGFDP 128

Query: 122 TTHNLL 128
            THNLL
Sbjct: 129 NTHNLL 128

[Close]
BLAST of CsaV3_6G053110 vs. TrEMBL
Match: tr|Q7F0R0|Q7F0R0_ORYSJ (Os07g0497500 protein OS=Oryza sativa subsp. japonica OX=39947 GN=P0005E02.111 PE=4 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 9.5e-54
Identity = 105/127 (82.68%), Postives = 111/127 (87.40%), Query Frame = 0 

Query: 2   KKVKRGLWSPEEDEKLVKCMKRILSSDGAQAACWSRVPKMAGLERCGKSCRLRWINYLRP 61
           +KVKRGLWSPEEDEKLV    R +S  G   +CWS VPK AGL+RCGKSCRLRWINYLRP
Sbjct: 9   QKVKRGLWSPEEDEKLV----RYISEHG--HSCWSSVPKHAGLQRCGKSCRLRWINYLRP 68

Query: 62  DLKRGCFSAEEERTIIDVHRILGNRWAQIAKHLPGRTDNEIKNFWNSSIKKKLIAQGLDP 121
           DLKRG FS +EERTIIDVHRILGNRWAQIAKHLPGRTDNE+KNFWNS IKKKLIAQGLDP
Sbjct: 69  DLKRGTFSEQEERTIIDVHRILGNRWAQIAKHLPGRTDNEVKNFWNSCIKKKLIAQGLDP 128

Query: 122 TTHNLLP 129
            THNLLP
Sbjct: 129 KTHNLLP 129

The following BLAST results are available for this feature:
BLAST of CsaV3_6G053110 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_011658528.17.0e-117100.00PREDICTED: transcription repressor MYB6-like [Cucumis sativus] >KGN49541.1 hypot... [more]
XP_008439425.22.8e-9775.00PREDICTED: transcription repressor MYB5-like [Cucumis melo][more]
XP_023518177.13.9e-5987.30transcription factor MYB20-like [Cucurbita pepo subsp. pepo][more]
XP_022926820.16.7e-5987.30protein ODORANT1-like [Cucurbita moschata][more]
XP_023003550.16.7e-5987.30transcription factor MYB13-like [Cucurbita maxima][more]
BLAST of CsaV3_6G053110 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G12720.11.3e-5375.40myb domain protein 67[more]
AT1G09540.12.7e-4667.48myb domain protein 61[more]
AT1G57560.13.5e-4665.08myb domain protein 50[more]
AT5G26660.13.5e-4666.67myb domain protein 86[more]
AT4G01680.21.6e-4359.42myb domain protein 55[more]
BLAST of CsaV3_6G053110 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|P20027|MYB3_HORVU9.8e-4669.67Myb-related protein Hv33 OS=Hordeum vulgare OX=4513 GN=MYB2 PE=2 SV=3[more]
sp|Q8VZQ2|MYB61_ARATH4.9e-4567.48Transcription factor MYB61 OS=Arabidopsis thaliana OX=3702 GN=MYB61 PE=2 SV=1[more]
sp|Q8LPH6|MYB86_ARATH6.4e-4566.67Transcription factor MYB86 OS=Arabidopsis thaliana OX=3702 GN=MYB86 PE=2 SV=1[more]
sp|Q9FJP2|MYB53_ARATH6.6e-4262.81Transcription factor MYB53 OS=Arabidopsis thaliana OX=3702 GN=MYB53 PE=1 SV=1[more]
sp|Q9M2D9|MYB17_ARATH3.6e-4060.80Transcription factor MYB41 OS=Arabidopsis thaliana OX=3702 GN=MYB17 PE=1 SV=1[more]
BLAST of CsaV3_6G053110 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KPD6|A0A0A0KPD6_CUCSA4.6e-117100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G538700 PE=4 SV=1[more]
tr|A0A1S3AZE1|A0A1S3AZE1_CUCME1.8e-9775.00transcription repressor MYB5-like OS=Cucumis melo OX=3656 GN=LOC103484237 PE=4 S... [more]
tr|A0A2G5D2B3|A0A2G5D2B3_AQUCA1.9e-5481.10Uncharacterized protein OS=Aquilegia coerulea OX=218851 GN=AQUCO_03000294v1 PE=4... [more]
tr|A0A1S4A0C3|A0A1S4A0C3_TOBAC7.3e-5480.95transcription factor MYB86-like OS=Nicotiana tabacum OX=4097 GN=LOC107792344 PE=... [more]
tr|Q7F0R0|Q7F0R0_ORYSJ9.5e-5482.68Os07g0497500 protein OS=Oryza sativa subsp. japonica OX=39947 GN=P0005E02.111 PE... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Vocabulary: INTERPRO
TermDefinition
IPR009057Homeobox-like_sf
IPR017930Myb_dom
IPR001005SANT/Myb
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0030154 cell differentiation
biological_process GO:0006357 regulation of transcription from RNA polymerase II promoter
cellular_component GO:0005575 cellular_component
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0005634 nucleus
molecular_function GO:0003677 DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
molecular_function GO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding
molecular_function GO:0043565 sequence-specific DNA binding
molecular_function GO:0001135 transcription factor activity, RNA polymerase II transcription factor recruiting
molecular_function GO:0044212 transcription regulatory region DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_6G053110.1CsaV3_6G053110.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainSMARTSM00717santcoord: 5..61
e-value: 3.4E-8
score: 43.2
coord: 64..112
e-value: 1.7E-15
score: 67.5
IPR001005SANT/Myb domainPFAMPF00249Myb_DNA-bindingcoord: 65..108
e-value: 7.3E-15
score: 54.8
coord: 6..59
e-value: 3.7E-11
score: 42.9
IPR001005SANT/Myb domainCDDcd00167SANTcoord: 9..59
e-value: 9.84127E-6
score: 41.0218
IPR001005SANT/Myb domainCDDcd00167SANTcoord: 68..107
e-value: 1.43713E-11
score: 57.2002
NoneNo IPR availableGENE3DG3DSA:1.10.10.60coord: 1..64
e-value: 1.2E-15
score: 58.9
NoneNo IPR availableGENE3DG3DSA:1.10.10.60coord: 67..114
e-value: 1.2E-18
score: 68.8
NoneNo IPR availablePANTHERPTHR10641MYB-LIKE DNA-BINDING PROTEIN MYBcoord: 2..231
NoneNo IPR availablePANTHERPTHR10641:SF702SUBFAMILY NOT NAMEDcoord: 2..231
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 1..59
score: 14.866
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 60..114
score: 25.375
IPR009057Homeobox-like domain superfamilySUPERFAMILYSSF46689Homeodomain-likecoord: 4..106

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_6G053110CSPI06G37630Wild cucumber (PI 183967)cpicucB363
CsaV3_6G053110Cucsa.048980Cucumber (Gy14) v1cgycucB028
CsaV3_6G053110CmaCh07G000080Cucurbita maxima (Rimu)cmacucB1035
CsaV3_6G053110CmoCh07G000100Cucurbita moschata (Rifu)cmocucB1019
CsaV3_6G053110CsGy6G037000Cucumber (Gy14) v2cgybcucB298
CsaV3_6G053110Cla009903Watermelon (97103) v1cucwmB526
CsaV3_6G053110ClCG01G025880Watermelon (Charleston Gray)cucwcgB455
CsaV3_6G053110Lsi01G000110Bottle gourd (USVL1VR-Ls)cuclsiB462
CsaV3_6G053110Cla97C01G026050Watermelon (97103) v2cucwmbB430
CsaV3_6G053110BhiUN587G10Wax gourdcucwgoB570
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_6G053110Silver-seed gourdcarcucB0767
CsaV3_6G053110Silver-seed gourdcarcucB1118
CsaV3_6G053110Cucurbita maxima (Rimu)cmacucB0807
CsaV3_6G053110Cucurbita moschata (Rifu)cmocucB0791
CsaV3_6G053110Cucurbita pepo (Zucchini)cpecucB0096
CsaV3_6G053110Cucurbita pepo (Zucchini)cpecucB0618
CsaV3_6G053110Melon (DHL92) v3.5.1cucmeB520
CsaV3_6G053110Melon (DHL92) v3.6.1cucmedB508