CsaV3_6G052040 (gene) Cucumber (Chinese Long) v3

NameCsaV3_6G052040
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr6 : 30283847 .. 30284456 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CCATAAAAGGAATTAATAATAGAAGAAGGTGGGCCTGGATTTGGAAACATAAATAAAAGAATAGAGAAATAGAAAGGAGGCGGAAATGTCTAAAAACGTGGGAGAGTATGGTCAAAGAAAGCAGCTAAGGAGTCAAATCATGTCTGGTGTATTGTTCAAAGAGATGCAAAGTGGTCAAATAAAATCAACAAGGACGTGTAATTCATGCCCTAACACACACCAAAAGACATATCCTCCTCATTCCTCCACCCAACACAGCACGTGACCTACACCCACCCAACCCTTCCTCTTCTTTTCACTTTGATTCTCCATAAAGAATGTTTTTGGACTTCACACTTTCCACCCCCCCCATCAACTTCTCTCGCTAAATATGACCTATTCTTTATTGTTTTACTTCAAATTTATTATTAATCTAATTCCATACCCTAACCTTTGCCTTGGGCTTTGAGTTTATAGTATATTGATTAGGGTTTCTGGACATTGTTTGGATAGCATACATATATATATATATATCACCTAATGTTTGGGTGTGTTTTCAGATTCGGTTTATGTTGAACCTTATGATAGCATACTTAGTGAGTGGGTAGAATTTAGAATTTAAAAGGAAAAA

mRNA sequence

ATGTCTAAAAACGTGGGAGAGTATGGTCAAAGAAAGCAGCTAAGGAGTCAAATCATGTCTGGTGTATTGTTCAAAGAGATGCAAAGTGGTCAAATAAAATCAACAAGGACGTGTAATTCATGCCCTAACACACACCAAAAGACATATCCTCCTCATTCCTCCACCCAACACAGCACGTGA

Coding sequence (CDS)

ATGTCTAAAAACGTGGGAGAGTATGGTCAAAGAAAGCAGCTAAGGAGTCAAATCATGTCTGGTGTATTGTTCAAAGAGATGCAAAGTGGTCAAATAAAATCAACAAGGACGTGTAATTCATGCCCTAACACACACCAAAAGACATATCCTCCTCATTCCTCCACCCAACACAGCACGTGA

Protein sequence

MSKNVGEYGQRKQLRSQIMSGVLFKEMQSGQIKSTRTCNSCPNTHQKTYPPHSSTQHST
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_6G052040.1CsaV3_6G052040.1mRNA


Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 29..59

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_6G052040Silver-seed gourdcarcucB0332
CsaV3_6G052040Silver-seed gourdcarcucB0457
CsaV3_6G052040Silver-seed gourdcarcucB0767
CsaV3_6G052040Cucumber (Gy14) v2cgybcucB298
CsaV3_6G052040Cucumber (Gy14) v1cgycucB028
CsaV3_6G052040Cucurbita maxima (Rimu)cmacucB0265
CsaV3_6G052040Cucurbita maxima (Rimu)cmacucB0506
CsaV3_6G052040Cucurbita maxima (Rimu)cmacucB0807
CsaV3_6G052040Cucurbita maxima (Rimu)cmacucB1035
CsaV3_6G052040Cucurbita moschata (Rifu)cmocucB0254
CsaV3_6G052040Cucurbita moschata (Rifu)cmocucB0494
CsaV3_6G052040Cucurbita moschata (Rifu)cmocucB0791
CsaV3_6G052040Cucurbita moschata (Rifu)cmocucB1019
CsaV3_6G052040Cucurbita pepo (Zucchini)cpecucB0054
CsaV3_6G052040Cucurbita pepo (Zucchini)cpecucB0096
CsaV3_6G052040Cucurbita pepo (Zucchini)cpecucB0618
CsaV3_6G052040Cucurbita pepo (Zucchini)cpecucB0650
CsaV3_6G052040Wild cucumber (PI 183967)cpicucB363
CsaV3_6G052040Bottle gourd (USVL1VR-Ls)cuclsiB462
CsaV3_6G052040Bottle gourd (USVL1VR-Ls)cuclsiB465
CsaV3_6G052040Melon (DHL92) v3.5.1cucmeB464
CsaV3_6G052040Melon (DHL92) v3.5.1cucmeB520
CsaV3_6G052040Melon (DHL92) v3.6.1cucmedB454
CsaV3_6G052040Melon (DHL92) v3.6.1cucmedB508
CsaV3_6G052040Watermelon (Charleston Gray)cucwcgB455
CsaV3_6G052040Watermelon (Charleston Gray)cucwcgB483
CsaV3_6G052040Watermelon (97103) v1cucwmB506
CsaV3_6G052040Watermelon (97103) v1cucwmB526
CsaV3_6G052040Watermelon (97103) v2cucwmbB430
CsaV3_6G052040Wax gourdcucwgoB640
CsaV3_6G052040Wax gourdcucwgoB658