CsaV3_6G048030 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_6G048030
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	Myb family transcription factor APL
Location	chr6 : 28244352 .. 28249640 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCTTCTTCTTCTTCTTCTTCATCACCCAACAATGGACTTCCAATTTCTCTCTAATTCATTCTTAACCCAACTCCAGATTTCATCTTCTTCCTTCCCTCGCTGATAAAAAAATCCCTTCTTTCTTCCCTTCTTTCATTCCCATTTTCACCATTTTTTTTTCTTCTTCTCCCTCTCCCCTTTTCACGACAAGGGTTATGTTTCCTAGACTTGTTAATCCCGACGGAGATATCCAGATCCATGGTCCCCGTGGTTCTGTTGCTTCTGACCTCACCCACACTCACCGTGGAGACCCTTGTCTCGTTTTGACTTCAGATCCCAAACCACGCCTCCGATGGACTGCGGATCTTCACGAGCGATTCGTCGATGCCGTTACTCAGCTCGGTGGTGCTGGCAGTCAGTGCTTCTTTCTCCATTTACTTTAATTTCTCCAGTTTTTATAAGCGTTTAGTCTCATTAATCTGGATGTTTTGTTTTTCTTCTTGTTCATCTGTTTGTTGCAATAGACGCGTTACTTGAAGTGGGCAGGCTGTTCACTCAACTAGCTTCGATTAGATTAAACTTCTTTTATTTACTTATTTTTCTTTTACTAAGAATAGCGGCGATCGTCTGCTTAGTACCTATTTTTTAGACGATTTAGTGTAGAATTTCGATTTTCGTTTTGAGTACTTTTGCATTGTGATGAATGATTGATGCGTTGAAATGAGTTGCGTTCCATCAGGATCAAGCACTGGAAAGTGGAACGCCTACATTTTAGTTCTACTATTCACTTGTGCTTACAATGTGAATGGGTTGTTTGATTCTGTTGAAAGATTCTCATTGGTGACGATCACCTAGCATTTAGCCAGGTAAAAAACTTAGTAGAAATTAGGCAACTTATGGTTGAAAAGGAAAGCATGGGTTAAGACTTTAGAGTAATGGGATGGGAGGCCAGGCTCATTCCTCTAGAGTAGTTAAATTCGGCAGATTCTTTATCGATCTTTCAAATTTCACGACTTTGTCAAAGCCATAGTAGTTCAGTTGGTCTCTAGAAATGGGGACTTTGTGCTTGAGTACTTTGAAGAATGTTCATAAATGATTGCTGTCTGGGAAGGGTATGCTTCTAATTGGATAAAAGATTGTTTAGATTTTGATGGAGGATATTTGATATTGCTGTTGTTTCATTTAAACAGTCAGGAAGAAAAATTTTAGTCTGTCTAGCTTTCAAATATTTTAAGGGTGTCACTTTGTTTTTATTTTTAAGGATTGGAATCCCTGGAACTTCTGTTTGGCTTCATTGGTTTCTTTGAGGTCCTTTTTGTTTAACTTTTGTGGTGCAGTCATTCATTTTTCTTGTTAATAAGCATACCGTTGGAACTCGGTATCTGTCCATTATTTGATAAGAAATCTATTTAGACTTTCACATAAAACCCAATCGTGAGTTTATAATTAGGATGTCAATATACCTTTAGATTTTGTATCCAACTAGATATCAACTTCATTTGATACGATGACTTTATTAAACATCATATACCTTTAAAATACAGTTTTAGACAATCTGAAATCAGATTAAAAAAAAATCTATAAACAGTTTTGATTCATTCCTAAGTAGTAGTAGTAGTATGCGTCATCATTTTCATGCTCACATATTCACTGCAACTAAGCATGACTGTAGTTGCAGTATGTTTGACTTTGTTCAAGACATGTATATGAATAAATTACCTTGCAGAAAAGTTAATGGAACCAGACATCATTTGAATGTTATTGGGTAAACTTTATACAACTTTAGGTTTTTGTAATTCGTTGTTTGAACACCTTCACTAGTTAACTTAATGATCTAGGTAGTGAGGTACATATCAAGATTCCTTCATGGTCATATCTCAGGAGCGATAATTAATGTTATTATATGTGAAATTTGCTCAACCACATAAGTTATCCTTTCTTATCATATTTACGGGTTTTGTTAGCCTTTGCCTCATAATGGAGTATCAAGGCACAGTCTGCCAGTAAGAAATCTCATCATCAGTTTGAAGATAGTTTTGTTTTCTAGTTGTGAAAATAGTTCATCTGTATACTGGTGAAGGCACATGTAAGAGTCCACAAAGATAAAATATCATCGTGATTCTATCTAGTTTTTACAGTTGAAAGTAGTTATATGAACTTAATGGGAACGACAATTTCGTCTTTATATATTTTATTTATGTGCTTAAGTTACACATAAATGTTTCAACTCCTCCAGGAAAAATATTGGATTGAAGTACAATATAACCACAAAGGAGATCGTTAAAGTTTTGACATTGTGAAACTAATGTCCACATTAACTGGTTGCTTAAATTTTGAAATGGTTTTGGTTTTTTTTTTTTAAATCCAATTCAGCCAGTCAGAAAATATTGTTATACTGTATTTATATCACAACATAATCAATGTGAATCTTTTTATAATACGGTTCGTACTGTGTGGCAGACTTGTAATGTTCAATATGTCATTGTTAAAGAGTTTTATATAAGAACTTAAAAAAAAAATCTTTATTTTTACCTTTTGTTTTGTAGTTTTTAGATCTTTTGGGATGAGAAGTAGACTTTTTCGCTATCAAAACACCCAAAGAACAACTTAGAGATAGACATAAAACCTCCGATCAAGATTGTTAGGAAGAGCAGTGTAACTGTGTTATGCACTCCAATTAAGGTCTTAAATGGTACAATCTGACAAAAATGGTTGGACTCCTGTTCTTTTCTTTGAAGATATTGTTATTTATTTTCTTTTGGAGAATGATCGACATGTTTGACCATAAGATTCGAACTTTACAAAAACCAGAATTTGTAGTGTAATCGTTAAGTTCACTTGTTGCCAGAAGCTCCAGCTTAGTTTTTTAGGCGTCTGTTTCTTTTCTTGAAATCAAAGGTTCAAATCCTCATCTCCACATTTGTTGTACTTTAAAAAAAAAAAAGCATTAGTCCATTTACTTGCAGCATAGAGAAACTTTCTTTGCATGCCTTGACTGATGGGTCTTCTGACTATCTTTCTTTTAATTTGTTTATTGGTGGGGACAAGGGTGGGGATGATATGGGTCATATTTGAATTCTAGTCAATGATCAGGGTTTGACATTTGAACACTTGGTGCAGAAGCTACTCCAAAAGCAATAATGCGAACAATGAATGTGAAAGGACTGACTCTCTTCCATTTGAAGAGCCACCTCCAGGTAATCATAATGGCATGAAAATGCATCTTTCTATGAAAGAGTTCTGATGTTGGAATTCATGGTGGATTTATTTTTATGTATGCTTGTTTCTTTATTACAGAAATACAGATTAGGTAAGCAATCTGGGAAGGATATGGGTGAGGCATCTAAAGATGGTAAGCGACACATCTCTATTTTTGTCCTTGCATACCATGCGATGTAGCCTCCATGAGTCTGCTGATGTTCAACTACGTTATTTGTGTTGGGTCATGGAGTTCTTATCCAAAAGAACTTGCTCTCCTTTCACTATCAGCATTTGCTCTTGCTACTAATTTCTGAAAGTTTTAACCTATCTAGTCAACTATTTAAATCTTTATTTATCGCTTGGTGCAATGAACATCAGGTGCATACCTTTTAGAAAGTCCAAGTACCAATAATTTCTCTCCTGACTTGCCAATTTCTGAAATGGCCGAGTAAGATAAGAGTTTTTTTCCCTCCTTTAAGATACTTGTGATAATGCCTTGAATGTTGTGTTATGAGATATCAAGTTTGTTCAAACTGTTTATAACTTAAATGTTTGTTTCAGTGGTTATGAAGTCAAGGAGGCATTAAGAGCGCAAATGGAGGTGCAAAGTAAATTGCATCTGCAAGTTGAGGTAAAATTTTCATCCTTAACATCAAAATGGAAATTGATGATTGTTCTGGACAAGACTCCACGAAGAACCAAACTTGTTAGTGAATACTGGAGTGGGTCCTAAACATAATTTTAATGGTGAAAAGGCATATAAGTTTGTGGTTTTTAGATTGCTTGCTTAGTTGATTGTCCTCATGATCGAGTATGTTTAGAATTACTGATAAAAAAACTGGCGATGGAGATTTCTGTACCTGCTGATAGGATAGGAACTTCCAAGTTCCAAGTGTTAATACTGAGACTTGGGGTCCATTCTTCAGCTAGCTTACCTTACCATCGTTGGGCAGGCAGAGAAGCACCTACAAATTCGTCAGGATGCCGAGCGAAGATATTTGGCCATGCTTGAGAGAGCTTGTAAAATGCTTGCAGATCAATTCATTGTAGGTGCAGTTTCGGACTCAGACAGCAAGAAGTCCGAAGGACAGGATCGCAAGAGCCCGAGAAGTACTTCCATCGACCCACTTGGTTTCTACACCACGCAATCACAAGAGATGGAAAGAGTGAATGGAACAGAAGAAGTGCAGGCTAATCTTCCTTGCCAGAGGGCTGATTGTTCAACCGAAAGCTGCCTAACCTCAAATGAGAGTCCCGGGGGATTGGCTATGGAAAAATCTCCTGCTGCAAGCAAGAAAAACATGGTTAACTTGGGTTCAGCAACTGCATCTTTGATTTGGAGTGGAGCCAAGGAAGGAATACAAAATGCTAACATCATCCAAGTTAACCATCATGGCGTGTCCGGATGCGACATGTGGGGATAAAGTTCTGCAAACAAAAAAACTCATCATGATTGATGAAAAGTATGATCTATTTCCAACTCTGTAAAAAGCTCATTATTTTCCATTCATAGAATCTGGTATGAACTGCAGCATGAACATTCTCCCTACCTTGTAAACCCGAGCAGTTTAGTTCTTTGACAACTCGTCGCAAGTAGTTAGGCATTCTTTTTGCTGTTCTGGACAATTATAGTTGATTTCTGTCTGACTTTTGACAGATTTAATTCTATTATTAGGGTGTAATCAGTAATGTTATGTTGGAAACACATTCCTGTGTCACTTGTTAGTAGGTGAAATGCACATTGTCTTCCACCGATGATAGCAAAATGATTGAATATTGTGCCATTTTCACTTAGCAAGTATCCAATTATTTCTCATAC

mRNA sequence

ATGTTTCCTAGACTTGTTAATCCCGACGGAGATATCCAGATCCATGGTCCCCGTGGTTCTGTTGCTTCTGACCTCACCCACACTCACCGTGGAGACCCTTGTCTCGTTTTGACTTCAGATCCCAAACCACGCCTCCGATGGACTGCGGATCTTCACGAGCGATTCGTCGATGCCGTTACTCAGCTCGGTGGTGCTGGCAAAGCTACTCCAAAAGCAATAATGCGAACAATGAATGTGAAAGGACTGACTCTCTTCCATTTGAAGAGCCACCTCCAGAAATACAGATTAGGTAAGCAATCTGGGAAGGATATGGGTGAGGCATCTAAAGATGGTGCATACCTTTTAGAAAGTCCAAGTACCAATAATTTCTCTCCTGACTTGCCAATTTCTGAAATGGCCGATGGTTATGAAGTCAAGGAGGCATTAAGAGCGCAAATGGAGGTGCAAAGTAAATTGCATCTGCAAGTTGAGCTAGCTTACCTTACCATCGTTGGGCAGGCAGAGAAGCACCTACAAATTCGTCAGGATGCCGAGCGAAGATATTTGGCCATGCTTGAGAGAGCTTGTAAAATGCTTGCAGATCAATTCATTGTAGGTGCAGTTTCGGACTCAGACAGCAAGAAGTCCGAAGGACAGGATCGCAAGAGCCCGAGAAGTACTTCCATCGACCCACTTGGTTTCTACACCACGCAATCACAAGAGATGGAAAGAGTGAATGGAACAGAAGAAGTGCAGGCTAATCTTCCTTGCCAGAGGGCTGATTGTTCAACCGAAAGCTGCCTAACCTCAAATGAGAGTCCCGGGGGATTGGCTATGGAAAAATCTCCTGCTGCAAGCAAGAAAAACATGGTTAACTTGGGTTCAGCAACTGCATCTTTGATTTGGAGTGGAGCCAAGGAAGGAATACAAAATGCTAACATCATCCAAGTTAACCATCATGGCGTGTCCGGATGCGACATGTGGGGATAA

Coding sequence (CDS)

ATGTTTCCTAGACTTGTTAATCCCGACGGAGATATCCAGATCCATGGTCCCCGTGGTTCTGTTGCTTCTGACCTCACCCACACTCACCGTGGAGACCCTTGTCTCGTTTTGACTTCAGATCCCAAACCACGCCTCCGATGGACTGCGGATCTTCACGAGCGATTCGTCGATGCCGTTACTCAGCTCGGTGGTGCTGGCAAAGCTACTCCAAAAGCAATAATGCGAACAATGAATGTGAAAGGACTGACTCTCTTCCATTTGAAGAGCCACCTCCAGAAATACAGATTAGGTAAGCAATCTGGGAAGGATATGGGTGAGGCATCTAAAGATGGTGCATACCTTTTAGAAAGTCCAAGTACCAATAATTTCTCTCCTGACTTGCCAATTTCTGAAATGGCCGATGGTTATGAAGTCAAGGAGGCATTAAGAGCGCAAATGGAGGTGCAAAGTAAATTGCATCTGCAAGTTGAGCTAGCTTACCTTACCATCGTTGGGCAGGCAGAGAAGCACCTACAAATTCGTCAGGATGCCGAGCGAAGATATTTGGCCATGCTTGAGAGAGCTTGTAAAATGCTTGCAGATCAATTCATTGTAGGTGCAGTTTCGGACTCAGACAGCAAGAAGTCCGAAGGACAGGATCGCAAGAGCCCGAGAAGTACTTCCATCGACCCACTTGGTTTCTACACCACGCAATCACAAGAGATGGAAAGAGTGAATGGAACAGAAGAAGTGCAGGCTAATCTTCCTTGCCAGAGGGCTGATTGTTCAACCGAAAGCTGCCTAACCTCAAATGAGAGTCCCGGGGGATTGGCTATGGAAAAATCTCCTGCTGCAAGCAAGAAAAACATGGTTAACTTGGGTTCAGCAACTGCATCTTTGATTTGGAGTGGAGCCAAGGAAGGAATACAAAATGCTAACATCATCCAAGTTAACCATCATGGCGTGTCCGGATGCGACATGTGGGGATAA

Protein sequence

MFPRLVNPDGDIQIHGPRGSVASDLTHTHRGDPCLVLTSDPKPRLRWTADLHERFVDAVTQLGGAGKATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGKDMGEASKDGAYLLESPSTNNFSPDLPISEMADGYEVKEALRAQMEVQSKLHLQVELAYLTIVGQAEKHLQIRQDAERRYLAMLERACKMLADQFIVGAVSDSDSKKSEGQDRKSPRSTSIDPLGFYTTQSQEMERVNGTEEVQANLPCQRADCSTESCLTSNESPGGLAMEKSPAASKKNMVNLGSATASLIWSGAKEGIQNANIIQVNHHGVSGCDMWG

Homology

[Close]

BLAST of CsaV3_6G048030 vs. NCBI nr
Match: XP_011658094.1 (PREDICTED: protein PHR1-LIKE 1-like isoform X1 [Cucumis sativus])

HSP 1 Score: 644.4 bits (1661), Expect = 2.0e-181
Identity = 322/322 (100.00%), Postives = 322/322 (100.00%), Query Frame = 0


Query: 1   MFPRLVNPDGDIQIHGPRGSVASDLTHTHRGDPCLVLTSDPKPRLRWTADLHERFVDAVT 60
           MFPRLVNPDGDIQIHGPRGSVASDLTHTHRGDPCLVLTSDPKPRLRWTADLHERFVDAVT
Sbjct: 1   MFPRLVNPDGDIQIHGPRGSVASDLTHTHRGDPCLVLTSDPKPRLRWTADLHERFVDAVT 60

Query: 61  QLGGAGKATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGKDMGEASKDGAYLLESPST 120
           QLGGAGKATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGKDMGEASKDGAYLLESPST
Sbjct: 61  QLGGAGKATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGKDMGEASKDGAYLLESPST 120

Query: 121 NNFSPDLPISEMADGYEVKEALRAQMEVQSKLHLQVELAYLTIVGQAEKHLQIRQDAERR 180
           NNFSPDLPISEMADGYEVKEALRAQMEVQSKLHLQVELAYLTIVGQAEKHLQIRQDAERR
Sbjct: 121 NNFSPDLPISEMADGYEVKEALRAQMEVQSKLHLQVELAYLTIVGQAEKHLQIRQDAERR 180

Query: 181 YLAMLERACKMLADQFIVGAVSDSDSKKSEGQDRKSPRSTSIDPLGFYTTQSQEMERVNG 240
           YLAMLERACKMLADQFIVGAVSDSDSKKSEGQDRKSPRSTSIDPLGFYTTQSQEMERVNG
Sbjct: 181 YLAMLERACKMLADQFIVGAVSDSDSKKSEGQDRKSPRSTSIDPLGFYTTQSQEMERVNG 240

Query: 241 TEEVQANLPCQRADCSTESCLTSNESPGGLAMEKSPAASKKNMVNLGSATASLIWSGAKE 300
           TEEVQANLPCQRADCSTESCLTSNESPGGLAMEKSPAASKKNMVNLGSATASLIWSGAKE
Sbjct: 241 TEEVQANLPCQRADCSTESCLTSNESPGGLAMEKSPAASKKNMVNLGSATASLIWSGAKE 300

Query: 301 GIQNANIIQVNHHGVSGCDMWG 323
           GIQNANIIQVNHHGVSGCDMWG
Sbjct: 301 GIQNANIIQVNHHGVSGCDMWG 322

[Close]

BLAST of CsaV3_6G048030 vs. NCBI nr
Match: XP_011658096.1 (PREDICTED: protein PHR1-LIKE 1-like isoform X3 [Cucumis sativus])

HSP 1 Score: 607.8 bits (1566), Expect = 2.1e-170
Identity = 308/322 (95.65%), Postives = 308/322 (95.65%), Query Frame = 0


Query: 1   MFPRLVNPDGDIQIHGPRGSVASDLTHTHRGDPCLVLTSDPKPRLRWTADLHERFVDAVT 60
           MFPRLVNPDGDIQIHGPRGSVASDLTHTHRGDPCLVLTSDPKPRLRWTADLHERFVDAVT
Sbjct: 1   MFPRLVNPDGDIQIHGPRGSVASDLTHTHRGDPCLVLTSDPKPRLRWTADLHERFVDAVT 60

Query: 61  QLGGAGKATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGKDMGEASKDGAYLLESPST 120
           QLGGAGKATPKAIMRTMNVKGLTLFHLKSHLQKYRL              GAYLLESPST
Sbjct: 61  QLGGAGKATPKAIMRTMNVKGLTLFHLKSHLQKYRL--------------GAYLLESPST 120

Query: 121 NNFSPDLPISEMADGYEVKEALRAQMEVQSKLHLQVELAYLTIVGQAEKHLQIRQDAERR 180
           NNFSPDLPISEMADGYEVKEALRAQMEVQSKLHLQVELAYLTIVGQAEKHLQIRQDAERR
Sbjct: 121 NNFSPDLPISEMADGYEVKEALRAQMEVQSKLHLQVELAYLTIVGQAEKHLQIRQDAERR 180

Query: 181 YLAMLERACKMLADQFIVGAVSDSDSKKSEGQDRKSPRSTSIDPLGFYTTQSQEMERVNG 240
           YLAMLERACKMLADQFIVGAVSDSDSKKSEGQDRKSPRSTSIDPLGFYTTQSQEMERVNG
Sbjct: 181 YLAMLERACKMLADQFIVGAVSDSDSKKSEGQDRKSPRSTSIDPLGFYTTQSQEMERVNG 240

Query: 241 TEEVQANLPCQRADCSTESCLTSNESPGGLAMEKSPAASKKNMVNLGSATASLIWSGAKE 300
           TEEVQANLPCQRADCSTESCLTSNESPGGLAMEKSPAASKKNMVNLGSATASLIWSGAKE
Sbjct: 241 TEEVQANLPCQRADCSTESCLTSNESPGGLAMEKSPAASKKNMVNLGSATASLIWSGAKE 300

Query: 301 GIQNANIIQVNHHGVSGCDMWG 323
           GIQNANIIQVNHHGVSGCDMWG
Sbjct: 301 GIQNANIIQVNHHGVSGCDMWG 308

[Close]

BLAST of CsaV3_6G048030 vs. NCBI nr
Match: XP_022132805.1 (protein PHR1-LIKE 2-like isoform X1 [Momordica charantia] >XP_022132806.1 protein PHR1-LIKE 2-like isoform X1 [Momordica charantia])

HSP 1 Score: 569.7 bits (1467), Expect = 6.3e-159
Identity = 287/322 (89.13%), Postives = 299/322 (92.86%), Query Frame = 0


Query: 1   MFPRLVNPDGDIQIHGPRGSVASDLTHTHRGDPCLVLTSDPKPRLRWTADLHERFVDAVT 60
           MFPRLVNPD DIQIHG RGS  SDL  THRGDPCLVLTSDPKPRLRWTADLHERFVDAVT
Sbjct: 1   MFPRLVNPDSDIQIHGGRGSATSDL--THRGDPCLVLTSDPKPRLRWTADLHERFVDAVT 60

Query: 61  QLGGAGKATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGKDMGEASKDGAYLLESPST 120
           QLGGA KATPKAIMRTMNVKGLTLFHLKSHLQK+RLGKQSGKDMGE SKDGAYLLESPST
Sbjct: 61  QLGGASKATPKAIMRTMNVKGLTLFHLKSHLQKFRLGKQSGKDMGEGSKDGAYLLESPST 120

Query: 121 NNFSPDLPISEMADGYEVKEALRAQMEVQSKLHLQVELAYLTIVGQAEKHLQIRQDAERR 180
           NNFSPDLPISEMA+GYEVKEALRAQMEVQSKLHLQVELA LTIVGQAEKHL+IRQDAERR
Sbjct: 121 NNFSPDLPISEMAEGYEVKEALRAQMEVQSKLHLQVELADLTIVGQAEKHLRIRQDAERR 180

Query: 181 YLAMLERACKMLADQFIVGAVSDSDSKKSEGQDRKSPRSTSIDPLGFYTTQSQEMERVNG 240
           YLAMLERACKMLADQFI GAVSDSDSKKS+G DRKSPRS+S+DPLGFY +QSQEMER+NG
Sbjct: 181 YLAMLERACKMLADQFIGGAVSDSDSKKSQGLDRKSPRSSSVDPLGFYASQSQEMERMNG 240

Query: 241 TEEVQANLPCQRADCSTESCLTSNESPGGLAMEKSPAASKKNMVNLGSATASLIWSGAKE 300
           TEEVQANLP QRADCSTESCLTSNESPGGL MEKSP  S+K MVNL S TASLIWS AK+
Sbjct: 241 TEEVQANLPYQRADCSTESCLTSNESPGGLTMEKSPVGSQKKMVNLDSVTASLIWSEAKD 300

Query: 301 GIQNANIIQVNHHGVSGCDMWG 323
            IQ+ANIIQ+NHH  SGCDMWG
Sbjct: 301 RIQDANIIQINHHSASGCDMWG 320

[Close]

BLAST of CsaV3_6G048030 vs. NCBI nr
Match: XP_011658095.1 (PREDICTED: myb family transcription factor APL-like isoform X2 [Cucumis sativus] >KGN49012.1 hypothetical protein Csa_6G510300 [Cucumis sativus])

HSP 1 Score: 563.9 bits (1452), Expect = 3.5e-157
Identity = 288/322 (89.44%), Postives = 288/322 (89.44%), Query Frame = 0


Query: 1   MFPRLVNPDGDIQIHGPRGSVASDLTHTHRGDPCLVLTSDPKPRLRWTADLHERFVDAVT 60
           MFPRLVNPDGDIQIHGPRGSVASDLTHTHRGDPCLVLTSDPKPRLRWTADLHERFVDAVT
Sbjct: 1   MFPRLVNPDGDIQIHGPRGSVASDLTHTHRGDPCLVLTSDPKPRLRWTADLHERFVDAVT 60

Query: 61  QLGGAGKATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGKDMGEASKDGAYLLESPST 120
           QLGGAGKATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGKDMGEASKDGAYLLESPST
Sbjct: 61  QLGGAGKATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGKDMGEASKDGAYLLESPST 120

Query: 121 NNFSPDLPISEMADGYEVKEALRAQMEVQSKLHLQVELAYLTIVGQAEKHLQIRQDAERR 180
           NNFSPDLPISEMADGYEVKEALRAQM                                  
Sbjct: 121 NNFSPDLPISEMADGYEVKEALRAQM---------XXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 YLAMLERACKMLADQFIVGAVSDSDSKKSEGQDRKSPRSTSIDPLGFYTTQSQEMERVNG 240
           YLAMLERACKMLADQFIVGAVSDSDSKKSEGQDRKSPRSTSIDPLGFYTTQSQEMERVNG
Sbjct: 181 YLAMLERACKMLADQFIVGAVSDSDSKKSEGQDRKSPRSTSIDPLGFYTTQSQEMERVNG 240

Query: 241 TEEVQANLPCQRADCSTESCLTSNESPGGLAMEKSPAASKKNMVNLGSATASLIWSGAKE 300
           TEEVQANLPCQRADCSTESCLTSNESPGGLAMEKSPAASKKNMVNLGSATASLIWSGAKE
Sbjct: 241 TEEVQANLPCQRADCSTESCLTSNESPGGLAMEKSPAASKKNMVNLGSATASLIWSGAKE 300

Query: 301 GIQNANIIQVNHHGVSGCDMWG 323
           GIQNANIIQVNHHGVSGCDMWG
Sbjct: 301 GIQNANIIQVNHHGVSGCDMWG 313

[Close]

BLAST of CsaV3_6G048030 vs. NCBI nr
Match: XP_016899337.1 (PREDICTED: LOW QUALITY PROTEIN: myb family transcription factor APL-like [Cucumis melo])

HSP 1 Score: 557.0 bits (1434), Expect = 4.2e-155
Identity = 285/322 (88.51%), Postives = 285/322 (88.51%), Query Frame = 0


Query: 1   MFPRLVNPDGDIQIHGPRGSVASDLTHTHRGDPCLVLTSDPKPRLRWTADLHERFVDAVT 60
           MFPRLVNPDGDIQIHGPRGSVASDLTHTHRGDPCLVLTSDPKPRLRWTADLHERFVDAVT
Sbjct: 1   MFPRLVNPDGDIQIHGPRGSVASDLTHTHRGDPCLVLTSDPKPRLRWTADLHERFVDAVT 60

Query: 61  QLGGAGKATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGKDMGEASKDGAYLLESPST 120
           QLGGAGKATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGKDMGEASKDGAYLLESPST
Sbjct: 61  QLGGAGKATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGKDMGEASKDGAYLLESPST 120

Query: 121 NNFSPDLPISEMADGYEVKEALRAQMEVQSKLHLQVELAYLTIVGQAEKHLQIRQDAERR 180
           NNFSPDLPISEMADGYEVKEALRAQM                                  
Sbjct: 121 NNFSPDLPISEMADGYEVKEALRAQM---------XXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 YLAMLERACKMLADQFIVGAVSDSDSKKSEGQDRKSPRSTSIDPLGFYTTQSQEMERVNG 240
           YLAMLERACKMLADQFIVGAVSDSDSKKSEGQDRKSPRSTSIDPLGFYTTQSQEMERVNG
Sbjct: 181 YLAMLERACKMLADQFIVGAVSDSDSKKSEGQDRKSPRSTSIDPLGFYTTQSQEMERVNG 240

Query: 241 TEEVQANLPCQRADCSTESCLTSNESPGGLAMEKSPAASKKNMVNLGSATASLIWSGAKE 300
           TEEVQANLPCQRADCSTESCLTSNESPGGLAMEKSP ASKKNMVNL SATASLIWS AKE
Sbjct: 241 TEEVQANLPCQRADCSTESCLTSNESPGGLAMEKSPVASKKNMVNLDSATASLIWSDAKE 300

Query: 301 GIQNANIIQVNHHGVSGCDMWG 323
           GIQNANIIQVNHHGVSGCDMWG
Sbjct: 301 GIQNANIIQVNHHGVSGCDMWG 313

[Close]

BLAST of CsaV3_6G048030 vs. TAIR10
Match: AT3G24120.2 (Homeodomain-like superfamily protein)

HSP 1 Score: 142.1 bits (357), Expect = 5.9e-34
Identity = 68/94 (72.34%), Postives = 78/94 (82.98%), Query Frame = 0


Query: 31  GDPCLVLTSDPKPRLRWTADLHERFVDAVTQLGGAGKATPKAIMRTMNVKGLTLFHLKSH 90
           GD CLVLT+DPKPRLRWT +LHERFVDAVTQLGG  KATPK IMRTM VKGLTL+HLKSH
Sbjct: 30  GDACLVLTTDPKPRLRWTTELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSH 89

Query: 91  LQKYRLGKQSGKDMGEASKDGAYLLESPSTNNFS 125
           LQK+RLG+Q+GK+  E SKD + + ES  T + S
Sbjct: 90  LQKFRLGRQAGKESTENSKDASCVGESQDTGSSS 123

[Close]

BLAST of CsaV3_6G048030 vs. TAIR10
Match: AT4G13640.2 (Homeodomain-like superfamily protein)

HSP 1 Score: 136.0 bits (341), Expect = 4.2e-32
Identity = 66/93 (70.97%), Postives = 77/93 (82.80%), Query Frame = 0


Query: 32  DPCLVLTSDPKPRLRWTADLHERFVDAVTQLGGAGKATPKAIMRTMNVKGLTLFHLKSHL 91
           D CLVLT+DPKPRLRWT++LHERFVDAVTQLGG  KATPK IMRTM VKGLTL+HLKSHL
Sbjct: 27  DACLVLTTDPKPRLRWTSELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHL 86

Query: 92  QKYRLGKQSGKDMGEASKDGAYLLESPSTNNFS 125
           QK+RLG+QS K+  + SKD + + ES  T + S
Sbjct: 87  QKFRLGRQSCKESIDNSKDVSCVAESQDTGSSS 119

[Close]

BLAST of CsaV3_6G048030 vs. TAIR10
Match: AT1G79430.2 (Homeodomain-like superfamily protein)

HSP 1 Score: 126.7 bits (317), Expect = 2.6e-29
Identity = 78/174 (44.83%), Postives = 100/174 (57.47%), Query Frame = 0


Query: 30  RGDPCLVLTSDPKPRLRWTADLHERFVDAVTQLGGAGKATPKAIMRTMNVKGLTLFHLKS 89
           +GD  LVLT+DPKPRLRWT +LHERFVDAV QLGG  KATPK IMR M VKGLTL+HLKS
Sbjct: 22  QGDSGLVLTTDPKPRLRWTVELHERFVDAVAQLGGPDKATPKTIMRVMGVKGLTLYHLKS 81

Query: 90  HLQKYRLGKQSGKDMGE-ASKDGAYLLESPSTNNFSPDLPISEMADGYEVKEALRAQMEV 149
           HLQK+RLGKQ  K+ G+ ++K+G+         N +        + G   +     QMEV
Sbjct: 82  HLQKFRLGKQPHKEYGDHSTKEGSRASAMDIQRNVA-------SSSGMMSRNMNEMQMEV 141

Query: 150 QSKLHLQVELAYLTIVGQAE--KHLQIRQDAERRYLAMLERACKMLADQFIVGA 201
           Q +L                  K++Q          ++LERAC+ LA + +  A
Sbjct: 142 QRRLXXXXXXXXXXXXXXXXXGKYMQ----------SILERACQTLAGENMAAA 178

[Close]

BLAST of CsaV3_6G048030 vs. TAIR10
Match: AT3G12730.1 (Homeodomain-like superfamily protein)

HSP 1 Score: 120.9 bits (302), Expect = 1.4e-27
Identity = 76/163 (46.63%), Postives = 100/163 (61.35%), Query Frame = 0


Query: 35  LVLTSDPKPRLRWTADLHERFVDAVTQLGGAGKATPKAIMRTMNVKGLTLFHLKSHLQKY 94
           LVLT+DPKPRLRWT +LHERFVDAVT LGG  KATPK IMR M VKGLTL+HLKSHLQK+
Sbjct: 16  LVLTTDPKPRLRWTTELHERFVDAVTHLGGPEKATPKTIMRVMGVKGLTLYHLKSHLQKF 75

Query: 95  RLGKQSGKDMGE------ASKDGAYLLESPSTNNFSPDLPISEMADGYEVKEALRAQMEV 154
           RLGKQ  K+  +         + A +L+      F+     S +  G  + E    QMEV
Sbjct: 76  RLGKQPHKEHSQNHSICIRDTNRASMLDLRRNAVFT----TSPLIIGRNMNE---MQMEV 135

Query: 155 QSKLHLQVELAYLTIVGQAEKHLQIRQDAERRYL-AMLERACK 191
           Q ++  +V +         E+ +  R  A+ +Y+ +MLE+AC+
Sbjct: 136 QRRIEEEVVI---------ERQVNQRIAAQGKYMESMLEKACE 162

[Close]

BLAST of CsaV3_6G048030 vs. TAIR10
Match: AT5G45580.1 (Homeodomain-like superfamily protein)

HSP 1 Score: 114.8 bits (286), Expect = 1.0e-25
Identity = 53/79 (67.09%), Postives = 66/79 (83.54%), Query Frame = 0


Query: 36  VLTSDPKPRLRWTADLHERFVDAVTQLGGAGKATPKAIMRTMNVKGLTLFHLKSHLQKYR 95
           ++T DPKPRLRWTADLH+RFVDAV +LGGA KATPK++++ M +KGLTL+HLKSHLQKYR
Sbjct: 1   MMTRDPKPRLRWTADLHDRFVDAVAKLGGADKATPKSVLKLMGLKGLTLYHLKSHLQKYR 60

Query: 96  LGKQSGKDMG--EASKDGA 113
           LG+Q GK     E +K+ A
Sbjct: 61  LGQQQGKKQNRTEQNKENA 79

[Close]

BLAST of CsaV3_6G048030 vs. Swiss-Prot
Match: sp|Q94A57|PHL2_ARATH (Protein PHR1-LIKE 2 OS=Arabidopsis thaliana OX=3702 GN=PHL2 PE=1 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 1.3e-35
Identity = 101/237 (42.62%), Postives = 128/237 (54.01%), Query Frame = 0


Query: 31  GDPCLVLTSDPKPRLRWTADLHERFVDAVTQLGGAGKATPKAIMRTMNVKGLTLFHLKSH 90
           GD CLVLT+DPKPRLRWT +LHERFVDAVTQLGG  KATPK IMRTM VKGLTL+HLKSH
Sbjct: 30  GDACLVLTTDPKPRLRWTTELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSH 89

Query: 91  LQKYRLGKQSGKDMGEASKDGAYLLESPSTNNFSPD---LPISEMADGYEVKEALRAQME 150
           LQK+RLG+Q+GK+  E SKD + + ES  T + S     +   E  +GY+V EALRAQM 
Sbjct: 90  LQKFRLGRQAGKESTENSKDASCVGESQDTGSSSTSSMRMAQQEQNEGYQVTEALRAQMX 149

Query: 151 VQSKLHLQVELAYLTIVGQAEKHLQIRQDAERRYLAMLERACKMLADQFIVGA-VSDSDS 210
                                    ++        ++LE+ACK   +Q    A +  +  
Sbjct: 150 XXXXXXXXXXXXXXXXXXXXXXXXYLQ--------SILEKACKAFDEQAATFAGLEAARE 209

Query: 211 KKSEGQDRKSPRSTSIDPLGFYTTQSQEMERVNGTEEVQANLPCQRADCSTESCLTS 264
           + SE   + S  S       F  T+   M  ++       N      +CS ES LTS
Sbjct: 210 ELSELAIKVSNSSQGTSVPYFDATKMMMMPSLSELAVAIDNKNNITTNCSVESSLTS 258

[Close]

BLAST of CsaV3_6G048030 vs. Swiss-Prot
Match: sp|Q8LAJ7|PHL3_ARATH (Protein PHR1-LIKE 3 OS=Arabidopsis thaliana OX=3702 GN=PHL3 PE=1 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 2.1e-33
Identity = 99/248 (39.92%), Postives = 134/248 (54.03%), Query Frame = 0


Query: 32  DPCLVLTSDPKPRLRWTADLHERFVDAVTQLGGAGKATPKAIMRTMNVKGLTLFHLKSHL 91
           D CLVLT+DPKPRLRWT++LHERFVDAVTQLGG  KATPK IMRTM VKGLTL+HLKSHL
Sbjct: 27  DACLVLTTDPKPRLRWTSELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHL 86

Query: 92  QKYRLGKQSGKDMGEASKDGAYLLESPSTNNFSPD---LPISEMADGYEVKEALRAQMEV 151
           QK+RLG+QS K+  + SKD + + ES  T + S     L   E  + Y+V EALRAQ   
Sbjct: 87  QKFRLGRQSCKESIDNSKDVSCVAESQDTGSSSTSSLRLAAQEQNESYQVTEALRAQXXX 146

Query: 152 QSKLHLQVELAYLTIVGQAEKHLQIRQDAERRYLAMLERACKMLADQFIVGAVSDSDSKK 211
                                   ++        ++LE+ACK + +Q +  A +  ++ +
Sbjct: 147 XXXXXXXXXXXXXXXXXXXXXXXYLQ--------SILEKACKAIEEQAV--AFAGLEAAR 206

Query: 212 SEGQDRKSPRSTSIDPLGFYTTQSQEMERVNGTEEVQANLPCQRADCSTESCLTSNE--S 271
            E  +     S +    G  +T       +    E+   +   + +CS ES LTS+   S
Sbjct: 207 EELSELAIKASITNGCQGTTSTFDTTKMMIPSLSELAVAIE-HKNNCSAESSLTSSTVGS 263

Query: 272 PGGLAMEK 275
           P   A+ K
Sbjct: 267 PVSAALMK 263

[Close]

BLAST of CsaV3_6G048030 vs. Swiss-Prot
Match: sp|Q9SAK5|APL_ARATH (Myb family transcription factor APL OS=Arabidopsis thaliana OX=3702 GN=APL PE=1 SV=2)

HSP 1 Score: 126.7 bits (317), Expect = 4.6e-28
Identity = 78/174 (44.83%), Postives = 100/174 (57.47%), Query Frame = 0


Query: 30  RGDPCLVLTSDPKPRLRWTADLHERFVDAVTQLGGAGKATPKAIMRTMNVKGLTLFHLKS 89
           +GD  LVLT+DPKPRLRWT +LHERFVDAV QLGG  KATPK IMR M VKGLTL+HLKS
Sbjct: 22  QGDSGLVLTTDPKPRLRWTVELHERFVDAVAQLGGPDKATPKTIMRVMGVKGLTLYHLKS 81

Query: 90  HLQKYRLGKQSGKDMGE-ASKDGAYLLESPSTNNFSPDLPISEMADGYEVKEALRAQMEV 149
           HLQK+RLGKQ  K+ G+ ++K+G+         N +        + G   +     QMEV
Sbjct: 82  HLQKFRLGKQPHKEYGDHSTKEGSRASAMDIQRNVA-------SSSGMMSRNMNEMQMEV 141

Query: 150 QSKLHLQVELAYLTIVGQAE--KHLQIRQDAERRYLAMLERACKMLADQFIVGA 201
           Q +L                  K++Q          ++LERAC+ LA + +  A
Sbjct: 142 QRRLXXXXXXXXXXXXXXXXXGKYMQ----------SILERACQTLAGENMAAA 178

[Close]

BLAST of CsaV3_6G048030 vs. Swiss-Prot
Match: sp|Q8VYI2|PHLC_ARATH (Myb family transcription factor PHL12 OS=Arabidopsis thaliana OX=3702 GN=PHL12 PE=2 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 2.5e-26
Identity = 76/163 (46.63%), Postives = 100/163 (61.35%), Query Frame = 0


Query: 35  LVLTSDPKPRLRWTADLHERFVDAVTQLGGAGKATPKAIMRTMNVKGLTLFHLKSHLQKY 94
           LVLT+DPKPRLRWT +LHERFVDAVT LGG  KATPK IMR M VKGLTL+HLKSHLQK+
Sbjct: 16  LVLTTDPKPRLRWTTELHERFVDAVTHLGGPEKATPKTIMRVMGVKGLTLYHLKSHLQKF 75

Query: 95  RLGKQSGKDMGE------ASKDGAYLLESPSTNNFSPDLPISEMADGYEVKEALRAQMEV 154
           RLGKQ  K+  +         + A +L+      F+     S +  G  + E    QMEV
Sbjct: 76  RLGKQPHKEHSQNHSICIRDTNRASMLDLRRNAVFT----TSPLIIGRNMNE---MQMEV 135

Query: 155 QSKLHLQVELAYLTIVGQAEKHLQIRQDAERRYL-AMLERACK 191
           Q ++  +V +         E+ +  R  A+ +Y+ +MLE+AC+
Sbjct: 136 QRRIEEEVVI---------ERQVNQRIAAQGKYMESMLEKACE 162

[Close]

BLAST of CsaV3_6G048030 vs. Swiss-Prot
Match: sp|C0SVS4|PHLB_ARATH (Myb family transcription factor PHL11 OS=Arabidopsis thaliana OX=3702 GN=PHL11 PE=1 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 1.1e-24
Identity = 53/80 (66.25%), Postives = 67/80 (83.75%), Query Frame = 0


Query: 35  LVLTSDPKPRLRWTADLHERFVDAVTQLGGAGKATPKAIMRTMNVKGLTLFHLKSHLQKY 94
           +++T DPKPRLRWTADLH+RFVDAV +LGGA KATPK++++ M +KGLTL+HLKSHLQKY
Sbjct: 16  VMMTRDPKPRLRWTADLHDRFVDAVAKLGGADKATPKSVLKLMGLKGLTLYHLKSHLQKY 75

Query: 95  RLGKQSGKDMG--EASKDGA 113
           RLG+Q GK     E +K+ A
Sbjct: 76  RLGQQQGKKQNRTEQNKENA 95

[Close]

BLAST of CsaV3_6G048030 vs. TrEMBL
Match: tr|A0A0A0KL09|A0A0A0KL09_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G510300 PE=4 SV=1)

HSP 1 Score: 563.9 bits (1452), Expect = 2.3e-157
Identity = 288/322 (89.44%), Postives = 288/322 (89.44%), Query Frame = 0


Query: 1   MFPRLVNPDGDIQIHGPRGSVASDLTHTHRGDPCLVLTSDPKPRLRWTADLHERFVDAVT 60
           MFPRLVNPDGDIQIHGPRGSVASDLTHTHRGDPCLVLTSDPKPRLRWTADLHERFVDAVT
Sbjct: 1   MFPRLVNPDGDIQIHGPRGSVASDLTHTHRGDPCLVLTSDPKPRLRWTADLHERFVDAVT 60

Query: 61  QLGGAGKATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGKDMGEASKDGAYLLESPST 120
           QLGGAGKATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGKDMGEASKDGAYLLESPST
Sbjct: 61  QLGGAGKATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGKDMGEASKDGAYLLESPST 120

Query: 121 NNFSPDLPISEMADGYEVKEALRAQMEVQSKLHLQVELAYLTIVGQAEKHLQIRQDAERR 180
           NNFSPDLPISEMADGYEVKEALRAQM                                  
Sbjct: 121 NNFSPDLPISEMADGYEVKEALRAQM---------XXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 YLAMLERACKMLADQFIVGAVSDSDSKKSEGQDRKSPRSTSIDPLGFYTTQSQEMERVNG 240
           YLAMLERACKMLADQFIVGAVSDSDSKKSEGQDRKSPRSTSIDPLGFYTTQSQEMERVNG
Sbjct: 181 YLAMLERACKMLADQFIVGAVSDSDSKKSEGQDRKSPRSTSIDPLGFYTTQSQEMERVNG 240

Query: 241 TEEVQANLPCQRADCSTESCLTSNESPGGLAMEKSPAASKKNMVNLGSATASLIWSGAKE 300
           TEEVQANLPCQRADCSTESCLTSNESPGGLAMEKSPAASKKNMVNLGSATASLIWSGAKE
Sbjct: 241 TEEVQANLPCQRADCSTESCLTSNESPGGLAMEKSPAASKKNMVNLGSATASLIWSGAKE 300

Query: 301 GIQNANIIQVNHHGVSGCDMWG 323
           GIQNANIIQVNHHGVSGCDMWG
Sbjct: 301 GIQNANIIQVNHHGVSGCDMWG 313

[Close]

BLAST of CsaV3_6G048030 vs. TrEMBL
Match: tr|A0A1S4DTK9|A0A1S4DTK9_CUCME (LOW QUALITY PROTEIN: myb family transcription factor APL-like OS=Cucumis melo OX=3656 GN=LOC103485209 PE=4 SV=1)

HSP 1 Score: 557.0 bits (1434), Expect = 2.8e-155
Identity = 285/322 (88.51%), Postives = 285/322 (88.51%), Query Frame = 0


Query: 1   MFPRLVNPDGDIQIHGPRGSVASDLTHTHRGDPCLVLTSDPKPRLRWTADLHERFVDAVT 60
           MFPRLVNPDGDIQIHGPRGSVASDLTHTHRGDPCLVLTSDPKPRLRWTADLHERFVDAVT
Sbjct: 1   MFPRLVNPDGDIQIHGPRGSVASDLTHTHRGDPCLVLTSDPKPRLRWTADLHERFVDAVT 60

Query: 61  QLGGAGKATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGKDMGEASKDGAYLLESPST 120
           QLGGAGKATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGKDMGEASKDGAYLLESPST
Sbjct: 61  QLGGAGKATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGKDMGEASKDGAYLLESPST 120

Query: 121 NNFSPDLPISEMADGYEVKEALRAQMEVQSKLHLQVELAYLTIVGQAEKHLQIRQDAERR 180
           NNFSPDLPISEMADGYEVKEALRAQM                                  
Sbjct: 121 NNFSPDLPISEMADGYEVKEALRAQM---------XXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 YLAMLERACKMLADQFIVGAVSDSDSKKSEGQDRKSPRSTSIDPLGFYTTQSQEMERVNG 240
           YLAMLERACKMLADQFIVGAVSDSDSKKSEGQDRKSPRSTSIDPLGFYTTQSQEMERVNG
Sbjct: 181 YLAMLERACKMLADQFIVGAVSDSDSKKSEGQDRKSPRSTSIDPLGFYTTQSQEMERVNG 240

Query: 241 TEEVQANLPCQRADCSTESCLTSNESPGGLAMEKSPAASKKNMVNLGSATASLIWSGAKE 300
           TEEVQANLPCQRADCSTESCLTSNESPGGLAMEKSP ASKKNMVNL SATASLIWS AKE
Sbjct: 241 TEEVQANLPCQRADCSTESCLTSNESPGGLAMEKSPVASKKNMVNLDSATASLIWSDAKE 300

Query: 301 GIQNANIIQVNHHGVSGCDMWG 323
           GIQNANIIQVNHHGVSGCDMWG
Sbjct: 301 GIQNANIIQVNHHGVSGCDMWG 313

[Close]

BLAST of CsaV3_6G048030 vs. TrEMBL
Match: tr|A0A1S3UYI1|A0A1S3UYI1_VIGRR (uncharacterized protein LOC106769865 isoform X2 OS=Vigna radiata var. radiata OX=3916 GN=LOC106769865 PE=4 SV=1)

HSP 1 Score: 362.8 bits (930), Expect = 7.8e-97
Identity = 198/317 (62.46%), Postives = 231/317 (72.87%), Query Frame = 0


Query: 1   MFPRLVNP-DGDIQIHGPRGSVASDLTHTHRGDPCLVLTSDPKPRLRWTADLHERFVDAV 60
           MF RL++P +G +     +G+      H H GDPCLVLTSDPKPRLRWTADLHERFVDAV
Sbjct: 1   MFSRLIHPHEGGVGQEDMQGA----SNHAHLGDPCLVLTSDPKPRLRWTADLHERFVDAV 60

Query: 61  TQLGGAGKATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGKDMGEASKDGAYLLESPS 120
           TQLGGA KATPKAIMRTMNVKGLTL+HLKSHLQKYRLGKQSGKD  E  KDG+YL ESP 
Sbjct: 61  TQLGGASKATPKAIMRTMNVKGLTLYHLKSHLQKYRLGKQSGKDSDEGCKDGSYLQESPG 120

Query: 121 TNNFSPDLPISEMADGYEVKEALRAQMEVQSKLHLQVELAYLTIVGQAEKHLQIRQDAER 180
           T+N SP LP S+  +G+EVKEALRAQMEVQSKLHL VE         AEKHLQIRQDAER
Sbjct: 121 TDNSSPKLPTSDANEGHEVKEALRAQMEVQSKLHLLVE---------AEKHLQIRQDAER 180

Query: 181 RYLAMLERACKMLADQFIVGAVSDSDSKKSEGQDRKSPRSTSIDPLGFYTTQSQEMERVN 240
           RY+ MLERACKMLADQFI   + D+D +K +G + K+PRS+ +D +GF+     E+  ++
Sbjct: 181 RYMGMLERACKMLADQFIGDIIMDTDGQKFQGLESKTPRSSLVDHVGFFPPVCSEVGGMH 240

Query: 241 GTEEVQANLPCQRADCSTESCLTSNESPGGLAMEKSPAASKKNMVNLGSATASLIWSGAK 300
              EV   L  Q ADCSTESCLTS ES GGL +E SP  SKK M++L S  A LIWS A 
Sbjct: 241 -VSEVPPILQPQGADCSTESCLTSLESLGGLTLEGSPGGSKKRMLSLDSMVAPLIWSEAN 300

Query: 301 EGIQNANIIQVNHHGVS 317
              Q  ++ QVN  G++
Sbjct: 301 TRTQGIHLAQVNPPGIT 303

[Close]

BLAST of CsaV3_6G048030 vs. TrEMBL
Match: tr|A0A1S3UYJ4|A0A1S3UYJ4_VIGRR (uncharacterized protein LOC106769865 isoform X1 OS=Vigna radiata var. radiata OX=3916 GN=LOC106769865 PE=4 SV=1)

HSP 1 Score: 357.5 bits (916), Expect = 3.3e-95
Identity = 198/320 (61.88%), Postives = 231/320 (72.19%), Query Frame = 0


Query: 1   MFPRLVNP-DGDIQIHGPRGSVASDLTHTHRGDPCLVLTSDPKPRLRWTADLHERFVDAV 60
           MF RL++P +G +     +G+      H H GDPCLVLTSDPKPRLRWTADLHERFVDAV
Sbjct: 1   MFSRLIHPHEGGVGQEDMQGA----SNHAHLGDPCLVLTSDPKPRLRWTADLHERFVDAV 60

Query: 61  TQLGGAGKATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGKDMGEASKD---GAYLLE 120
           TQLGGA KATPKAIMRTMNVKGLTL+HLKSHLQKYRLGKQSGKD  E  KD   G+YL E
Sbjct: 61  TQLGGASKATPKAIMRTMNVKGLTLYHLKSHLQKYRLGKQSGKDSDEGCKDGMSGSYLQE 120

Query: 121 SPSTNNFSPDLPISEMADGYEVKEALRAQMEVQSKLHLQVELAYLTIVGQAEKHLQIRQD 180
           SP T+N SP LP S+  +G+EVKEALRAQMEVQSKLHL VE         AEKHLQIRQD
Sbjct: 121 SPGTDNSSPKLPTSDANEGHEVKEALRAQMEVQSKLHLLVE---------AEKHLQIRQD 180

Query: 181 AERRYLAMLERACKMLADQFIVGAVSDSDSKKSEGQDRKSPRSTSIDPLGFYTTQSQEME 240
           AERRY+ MLERACKMLADQFI   + D+D +K +G + K+PRS+ +D +GF+     E+ 
Sbjct: 181 AERRYMGMLERACKMLADQFIGDIIMDTDGQKFQGLESKTPRSSLVDHVGFFPPVCSEVG 240

Query: 241 RVNGTEEVQANLPCQRADCSTESCLTSNESPGGLAMEKSPAASKKNMVNLGSATASLIWS 300
            ++   EV   L  Q ADCSTESCLTS ES GGL +E SP  SKK M++L S  A LIWS
Sbjct: 241 GMH-VSEVPPILQPQGADCSTESCLTSLESLGGLTLEGSPGGSKKRMLSLDSMVAPLIWS 300

Query: 301 GAKEGIQNANIIQVNHHGVS 317
            A    Q  ++ QVN  G++
Sbjct: 301 EANTRTQGIHLAQVNPPGIT 306

[Close]

BLAST of CsaV3_6G048030 vs. TrEMBL
Match: tr|V7BEH4|V7BEH4_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_007G139300g PE=4 SV=1)

HSP 1 Score: 355.5 bits (911), Expect = 1.2e-94
Identity = 197/320 (61.56%), Postives = 232/320 (72.50%), Query Frame = 0


Query: 1   MFPRLVNP-DGDIQIHGPRGSVASDLTHTHRGDPCLVLTSDPKPRLRWTADLHERFVDAV 60
           MF RL++P +G +     +  + +   H H GDPCLVLTSDPKPRLRWTADLHERFVDAV
Sbjct: 1   MFSRLIHPHEGGV----AQEDMQAASNHAHLGDPCLVLTSDPKPRLRWTADLHERFVDAV 60

Query: 61  TQLGGAGKATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGKDMGEASKD---GAYLLE 120
           TQLGGA KATPKAIMRTMNVKGLTL+HLKSHLQKYRLGKQSGKD  E  KD   G+YL E
Sbjct: 61  TQLGGASKATPKAIMRTMNVKGLTLYHLKSHLQKYRLGKQSGKDSDEGCKDGMSGSYLQE 120

Query: 121 SPSTNNFSPDLPISEMADGYEVKEALRAQMEVQSKLHLQVELAYLTIVGQAEKHLQIRQD 180
           SP T N SP+LP SE  +G+EVKEALRAQMEVQSKLHL VE         AEKHLQIRQD
Sbjct: 121 SPGTGNSSPNLPTSEANEGHEVKEALRAQMEVQSKLHLLVE---------AEKHLQIRQD 180

Query: 181 AERRYLAMLERACKMLADQFIVGAVSDSDSKKSEGQDRKSPRSTSIDPLGFYTTQSQEME 240
           AERRY+ MLERACKMLADQFI   + ++D +K +G + K+PRS+ +D +G++     E+ 
Sbjct: 181 AERRYMGMLERACKMLADQFIGDMIMETDGQKFQGLESKTPRSSLVDHVGYFPPVCSEVG 240

Query: 241 RVNGTEEVQANLPCQRADCSTESCLTSNESPGGLAMEKSPAASKKNMVNLGSATASLIWS 300
            ++   EV A L  Q ADCSTESCLTS ES GGL +E SP  SKK M++L S  A LIWS
Sbjct: 241 GMH-VSEVAAILHPQGADCSTESCLTSLESLGGLTLEGSPGGSKKRMLSLDSMVAPLIWS 300

Query: 301 GAKEGIQNANIIQVNHHGVS 317
            A    Q  ++ QVN  G++
Sbjct: 301 EANTRTQGIHLGQVNPPGIT 306

The following BLAST results are available for this feature:

BLAST of CsaV3_6G048030 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011658094.1	2.0e-181	100.00	PREDICTED: protein PHR1-LIKE 1-like isoform X1 [Cucumis sativus]	[more]
XP_011658096.1	2.1e-170	95.65	PREDICTED: protein PHR1-LIKE 1-like isoform X3 [Cucumis sativus]	[more]
XP_022132805.1	6.3e-159	89.13	protein PHR1-LIKE 2-like isoform X1 [Momordica charantia] >XP_022132806.1 protei...	[more]
XP_011658095.1	3.5e-157	89.44	PREDICTED: myb family transcription factor APL-like isoform X2 [Cucumis sativus]...	[more]
XP_016899337.1	4.2e-155	88.51	PREDICTED: LOW QUALITY PROTEIN: myb family transcription factor APL-like [Cucumi...	[more]

BLAST of CsaV3_6G048030 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G24120.2	5.9e-34	72.34	Homeodomain-like superfamily protein	[more]
AT4G13640.2	4.2e-32	70.97	Homeodomain-like superfamily protein	[more]
AT1G79430.2	2.6e-29	44.83	Homeodomain-like superfamily protein	[more]
AT3G12730.1	1.4e-27	46.63	Homeodomain-like superfamily protein	[more]
AT5G45580.1	1.0e-25	67.09	Homeodomain-like superfamily protein	[more]

BLAST of CsaV3_6G048030 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q94A57\|PHL2_ARATH	1.3e-35	42.62	Protein PHR1-LIKE 2 OS=Arabidopsis thaliana OX=3702 GN=PHL2 PE=1 SV=1	[more]
sp\|Q8LAJ7\|PHL3_ARATH	2.1e-33	39.92	Protein PHR1-LIKE 3 OS=Arabidopsis thaliana OX=3702 GN=PHL3 PE=1 SV=1	[more]
sp\|Q9SAK5\|APL_ARATH	4.6e-28	44.83	Myb family transcription factor APL OS=Arabidopsis thaliana OX=3702 GN=APL PE=1 ...	[more]
sp\|Q8VYI2\|PHLC_ARATH	2.5e-26	46.63	Myb family transcription factor PHL12 OS=Arabidopsis thaliana OX=3702 GN=PHL12 P...	[more]
sp\|C0SVS4\|PHLB_ARATH	1.1e-24	66.25	Myb family transcription factor PHL11 OS=Arabidopsis thaliana OX=3702 GN=PHL11 P...	[more]

BLAST of CsaV3_6G048030 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KL09\|A0A0A0KL09_CUCSA	2.3e-157	89.44	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G510300 PE=4 SV=1	[more]
tr\|A0A1S4DTK9\|A0A1S4DTK9_CUCME	2.8e-155	88.51	LOW QUALITY PROTEIN: myb family transcription factor APL-like OS=Cucumis melo OX...	[more]
tr\|A0A1S3UYI1\|A0A1S3UYI1_VIGRR	7.8e-97	62.46	uncharacterized protein LOC106769865 isoform X2 OS=Vigna radiata var. radiata OX...	[more]
tr\|A0A1S3UYJ4\|A0A1S3UYJ4_VIGRR	3.3e-95	61.88	uncharacterized protein LOC106769865 isoform X1 OS=Vigna radiata var. radiata OX...	[more]
tr\|V7BEH4\|V7BEH4_PHAVU	1.2e-94	61.56	Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_007G139300g PE=4 ...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding

Vocabulary: **INTERPRO**
Term	Definition
IPR009057	Homeobox-like_sf
IPR001005	SANT/Myb
IPR006447	Myb_dom_plants
IPR025756	Myb_CC_LHEQLE

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_6G048030.1	CsaV3_6G048030.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025756	MYB-CC type transcription factor, LHEQLE-containing domain	PFAM	PF14379	Myb_CC_LHEQLE	coord: 137..191 e-value: 2.4E-10 score: 39.8
None	No IPR available	GENE3D	G3DSA:1.10.10.60		coord: 38..100 e-value: 3.1E-26 score: 93.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 202..225
None	No IPR available	PANTHER	PTHR31499:SF9	SUBFAMILY NOT NAMED	coord: 3..312
None	No IPR available	PANTHER	PTHR31499	FAMILY NOT NAMED	coord: 3..312
IPR006447	Myb domain, plants	TIGRFAM	TIGR01557	TIGR01557	coord: 42..97 e-value: 3.5E-23 score: 79.7
IPR001005	SANT/Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 44..95 e-value: 6.1E-7 score: 29.4
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	SSF46689	Homeodomain-like	coord: 42..98

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_6G048030	CSPI06G32600	Wild cucumber (PI 183967)	cpicucB363
CsaV3_6G048030	Cucsa.044400	Cucumber (Gy14) v1	cgycucB028
CsaV3_6G048030	CmaCh07G003720	Cucurbita maxima (Rimu)	cmacucB1035
CsaV3_6G048030	CmaCh03G006100	Cucurbita maxima (Rimu)	cmacucB0809
CsaV3_6G048030	CmoCh03G006380	Cucurbita moschata (Rifu)	cmocucB0793
CsaV3_6G048030	CmoCh07G003670	Cucurbita moschata (Rifu)	cmocucB1019
CsaV3_6G048030	Cp4.1LG10g10130	Cucurbita pepo (Zucchini)	cpecucB0092
CsaV3_6G048030	Cp4.1LG19g08330	Cucurbita pepo (Zucchini)	cpecucB0618
CsaV3_6G048030	CsGy6G032220	Cucumber (Gy14) v2	cgybcucB298
CsaV3_6G048030	Carg07902	Silver-seed gourd	carcucB0674
CsaV3_6G048030	Cla014367	Watermelon (97103) v1	cucwmB526
CsaV3_6G048030	MELO3C007989	Melon (DHL92) v3.5.1	cucmeB517
CsaV3_6G048030	ClCG01G021030	Watermelon (Charleston Gray)	cucwcgB455
CsaV3_6G048030	Lsi01G005190	Bottle gourd (USVL1VR-Ls)	cuclsiB462
CsaV3_6G048030	MELO3C007989.2	Melon (DHL92) v3.6.1	cucmedB505
CsaV3_6G048030	Cla97C01G020610	Watermelon (97103) v2	cucwmbB430
CsaV3_6G048030	Bhi03G000545	Wax gourd	cucwgoB648

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_6G048030	Silver-seed gourd	carcucB0442
CsaV3_6G048030	Melon (DHL92) v3.6.1	cucmedB496