CsaV3_6G046380 (gene) Cucumber (Chinese Long) v3

NameCsaV3_6G046380
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr6 : 27408335 .. 27409044 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTCAAAGAAGAAGACGAATTGCAATTTCTCCGGCCAAAGAAAAAAAAAAATGGAAAGGGCAACGAGGTTCGTTTGCGCGCGGAGGTCAGTCAACGTCGCAATGAAACTGCGCCTAATTTTCATTTTCTATGACTTTCCCGGGAAATTCTTTTTTTTTTCCGGGAAAATCCATTTCATTTTGGGCGTTTTTCAGTTTCCAACCCGAAACACCATGGAATTCGATCCAGTTCAATCAGACACCCAAATTCCGAATAAACTAATCGATCGCTATAAATATATTTTACTTAATCGGTGGAATGAACTTCAACATCACAATCAAACAAACAAAATAAGCAGCCAATTTCAATATAATAATACAAAAAGAAGAAAAAATCGAAGAGAATATGGAATTAGGGATTAGGGATTAAGAGTAAGAGAATCGCAGAAGGCAAAGCCTAATCTCATCTCTGATCGCACGCGCTTCAACCATGTAACGAAAAATTCGAAACTGAAACCATCTGTTCTAAAGAGTGAGATAGTGTTAAATATTTCGAGGAAAAACGCGAGAGGAGATCGGCGGAGAAGAACTCCGATCGACGGAACAAACACAGAAGAAGAACAGCTTTTTAAGAACACGGCGGAGGACTTGGCCCCGTTTCGGAATCCAGCGAGGAGCTCCGGCAACCGCGACGGTGGCCATTTGGACGACGGCGGATTTGTTAATTGA

mRNA sequence

TGGTTCAAAGAAGAAGACGAATTGCAATTTCTCCGGCCAAAGAAAAAAAAAAATGGAAAGGGCAACGAGGTTCGTTTGCGCGCGGAGGGATTAAGAGTAAGAGAATCGCAGAAGGCAAAGCCTAATCTCATCTCTGATCGCACGCGCTTCAACCATGTAACGAAAAATTCGAAACTGAAACCATCTGTTCTAAAGAGTGAGATAGTGTTAAATATTTCGAGGAAAAACGCGAGAGGAGATCGGCGGAGAAGAACTCCGATCGACGGAACAAACACAGAAGAAGAACAGCTTTTTAAGAACACGGCGGAGGACTTGGCCCCGTTTCGGAATCCAGCGAGGAGCTCCGGCAACCGCGACGGTGGCCATTTGGACGACGGCGGATTTGTTAATTG

Coding sequence (CDS)

TGGTTCAAAGAAGAAGACGAATTGCAATTTCTCCGGCCAAAGAAAAAAAAAAATGGAAAGGGCAACGAGGTTCGTTTGCGCGCGGAGGGATTAAGAGTAAGAGAATCGCAGAAGGCAAAGCCTAATCTCATCTCTGATCGCACGCGCTTCAACCATGTAACGAAAAATTCGAAACTGAAACCATCTGTTCTAAAGAGTGAGATAGTGTTAAATATTTCGAGGAAAAACGCGAGAGGAGATCGGCGGAGAAGAACTCCGATCGACGGAACAAACACAGAAGAAGAACAGCTTTTTAAGAACACGGCGGAGGACTTGGCCCCGTTTCGGAATCCAGCGAGGAGCTCCGGCAACCGCGACGGTGGCCATTTGGACGACGGCGGATTTGTTAATTG

Protein sequence

WFKEEDELQFLRPKKKKNGKGNEVRLRAEGLRVRESQKAKPNLISDRTRFNHVTKNSKLKPSVLKSEIVLNISRKNARGDRRRRTPIDGTNTEEEQLFKNTAEDLAPFRNPARSSGNRDGGHLDDGGFVNX
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_6G046380.1CsaV3_6G046380.1mRNA


Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 75..131

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_6G046380Wild cucumber (PI 183967)cpicucB179
CsaV3_6G046380Wild cucumber (PI 183967)cpicucB242
CsaV3_6G046380Wild cucumber (PI 183967)cpicucB363
CsaV3_6G046380Bottle gourd (USVL1VR-Ls)cuclsiB462
CsaV3_6G046380Bottle gourd (USVL1VR-Ls)cuclsiB480
CsaV3_6G046380Bottle gourd (USVL1VR-Ls)cuclsiB499
CsaV3_6G046380Melon (DHL92) v3.5.1cucmeB498
CsaV3_6G046380Melon (DHL92) v3.5.1cucmeB514
CsaV3_6G046380Melon (DHL92) v3.5.1cucmeB517
CsaV3_6G046380Melon (DHL92) v3.6.1cucmedB485
CsaV3_6G046380Melon (DHL92) v3.6.1cucmedB501
CsaV3_6G046380Melon (DHL92) v3.6.1cucmedB505
CsaV3_6G046380Watermelon (Charleston Gray)cucwcgB455
CsaV3_6G046380Watermelon (Charleston Gray)cucwcgB493
CsaV3_6G046380Watermelon (Charleston Gray)cucwcgB509
CsaV3_6G046380Watermelon (97103) v1cucwmB509
CsaV3_6G046380Watermelon (97103) v1cucwmB521
CsaV3_6G046380Watermelon (97103) v1cucwmB526
CsaV3_6G046380Watermelon (97103) v2cucwmbB430
CsaV3_6G046380Watermelon (97103) v2cucwmbB482
CsaV3_6G046380Watermelon (97103) v2cucwmbB499
CsaV3_6G046380Wax gourdcucwgoB573
CsaV3_6G046380Wax gourdcucwgoB641
CsaV3_6G046380Wax gourdcucwgoB665
CsaV3_6G046380Cucumber (Chinese Long) v3cuccucB138
CsaV3_6G046380Cucumber (Chinese Long) v3cuccucB181
CsaV3_6G046380Silver-seed gourdcarcucB0442
CsaV3_6G046380Silver-seed gourdcarcucB0797
CsaV3_6G046380Silver-seed gourdcarcucB0990
CsaV3_6G046380Silver-seed gourdcarcucB1068
CsaV3_6G046380Cucumber (Gy14) v2cgybcucB144
CsaV3_6G046380Cucumber (Gy14) v2cgybcucB190
CsaV3_6G046380Cucumber (Gy14) v2cgybcucB298
CsaV3_6G046380Cucumber (Gy14) v1cgycucB179
CsaV3_6G046380Cucumber (Gy14) v1cgycucB527
CsaV3_6G046380Cucurbita maxima (Rimu)cmacucB0042
CsaV3_6G046380Cucurbita maxima (Rimu)cmacucB0410
CsaV3_6G046380Cucurbita maxima (Rimu)cmacucB0577
CsaV3_6G046380Cucurbita maxima (Rimu)cmacucB0809
CsaV3_6G046380Cucurbita maxima (Rimu)cmacucB1035
CsaV3_6G046380Cucurbita moschata (Rifu)cmocucB0028
CsaV3_6G046380Cucurbita moschata (Rifu)cmocucB0405
CsaV3_6G046380Cucurbita moschata (Rifu)cmocucB0567
CsaV3_6G046380Cucurbita moschata (Rifu)cmocucB0793
CsaV3_6G046380Cucurbita moschata (Rifu)cmocucB1019
CsaV3_6G046380Cucurbita pepo (Zucchini)cpecucB0092
CsaV3_6G046380Cucurbita pepo (Zucchini)cpecucB0280
CsaV3_6G046380Cucurbita pepo (Zucchini)cpecucB0580
CsaV3_6G046380Cucurbita pepo (Zucchini)cpecucB0618
CsaV3_6G046380Cucurbita pepo (Zucchini)cpecucB0724
CsaV3_6G046380Cucurbita pepo (Zucchini)cpecucB0984