CsaV3_6G044570 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_6G044570
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	transcription factor bHLH18-like
Location	chr6 : 26373287 .. 26375739 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTTCTTCTCACTTCATTTCATTCTTAATTCCATCGCTTTTTCGCAAACCCTTCCGTCGTCAACTTCAAGGTCACCTTAATATTCAACTCTCTCACTCTTCTGCTTCTTCTGCTTCTTCTTCTTCTTCTTCTTCTTCTTCACAAACTCCAAATTCAATTTCATCATATATAAAGTTTCATTTCAACTTTCTAAGTTTTTAGCCTCTTTTATTCATTCAAATTTATTCTCCACTGACTTTATTCTTTTGTTAATTGATTTATGCAGCTCATAGATCCTGATAAATTAAACCAAAGTTCATCAAATTTCCCCCATGGAAATCTCATCTGCAAAATGGCTGTCTGAAATGGTAAAAGAAAACAGAACTTTTTTACTCTTTCCTTTTTTGCACAAATTAATTATGGGGAAAAAAATCTGATTTTTCTTGTTGGGTTTATGGTAATTTCAATTAGGAACTGGAATCTTCATTCATGAATGATTTGGAAATGAACCCTTTTGAGTGCACACTAGAGGAGTTGAGTAGTTTCCAAACATTCTCCGACGAAAGCTACACATCCCACGTAGATCTAGACAATAGTTCTGTACAAACTCCGGCAGCACCGCCACCAGCAAAGCAGGCGAGGACCAGCAGCGGCTCAAGCCGTAGAATTTCTTCGATGGCGACTTCTTCTTCCTCGTCCCAAATCATTTCATTTGGGAACATTGAGATGTCCCCAATGGTTGCTCAACCTTCATATGACAACAACAACAACAACAATAAAACTTCAAATTATTATTGTTCACCAAATAAAAATCATGGGGTTGGAATCAAAAGGTCTGCTGCTGCAGCTATGAATAGTAATAATCGCAGCCCTTTGGTTGCTCAAGATCATGTCTTAGCTGAAAGAAAGCGTAGAGAAAAGCTTAGCCAGCGATTTGTTGCTCTTTCGGCCCTTATTCCAGATCTTAAAAAGGTGACATTTATGTTCCTTATATCCTAATTAAATTTCTCTTCTTTATTATTATGCAAAAAAATTAAATTGTTTTCATGTATTCGTTTATTATTTTACAATCCACGGGTACACAAGTTGGCTACCTGCATCCGATCATTGCTCTTCCTTGAATTAGTAGTAACTGACGTTAAATCACACAAATCAACTTAAAAGCATATACTAGTATGGTTTAATTATCAATGTTTCAACAATTGGTTGTATATATCAAAAGTTAATGTTTCAAATTAGATCAAAGTTTACTATGAAAAATTTTACCTTGACGTTCAAATTCCACATTTTCCATTTGCTTTCAAGAAACATATAGAACCATTCAGCCTAAAATTAAAGTTTATGTGTGTGAAGATTTAAGTTTTTGTTCCTCTATTTCTTGCTATCCTTTTTTAGAAAAGAAAAAAAAATTAAGCTTTTTAATATATTCAAATTCTCAATAGTTGCAATGATTTTTTTTTGGTACTAGATGGATAAAGCTTCCATTCTTGGGGATGCAATAACATACATCAAAGATCTTCAAGAACGTTTGAAGGTTGCAAACGAACAAGCAGCCAAAGCAACAGTGGAATCCGTGGTGTTTGTGAACAAATCTGACGATGCCTCTACCATCATCGCCAGTGACGATTCCTCAGAGGAAAACAGCTCCTCGTCGTCAGACGGAGCGATTCCGGACGTAGAAGCAAGAGTGTCTGGAAAGGATGTCCTTTTGAGGATTCATGGCAAGAAATGCAAAGGCTGTCTTTCAAATATACTAAATCAAATAGAGAAACTTAATCTCACAGTTCTCAACTCTAGTGCTTTGCCATTTGGCAATTTCAGGCTTGATATAACAATTATTGCTCAGGTACTTAATACAAATTTTTTTTATTTTTCATTTTTTATAATTTTGTGGATATTGAGGTTTACGGGACTAATTTGATTTTATTAATTATATAATTTGCAGATGGATGACGATTTTTCCATGACAGTGAAGGAACTAGTGCAGAAACTAAGACAAGCTTCTCTTGAATTTATGTAAACTTACAAATGACGTAATTAATCCTTAATTTTAGAGATAATAAAGCCTTGTGGAATCCCTAATTAAGGTTTTTTTTTTCTCTTTTGCTTTCCTTTTAGAAATTTTTGCGTGGGGCAAATCTTTGACCACGTTAAGGAAATTTAGGAAAAGAAAAACAACCACATGTGCTGTAAATCAAGCTTTGTTTTTCCCCCTCTTTTAAGATTACTTTTGATTCCAATTTTTTGGGGGTGTCTTCTTTTGCACTTGGATCTAAAATCTTTATGTAAGATTTCGTTTATTGGATTAATTAACTTTTGTTGTAATAATTGTGAAGATCTTACAACTAATTCTATAGATCTGACAGCTCCAATACAACATATAAATTAAAACAAAAACTAATTAGAGAACAAATTCCTTAATTTAAACAAACAAGTCATGGGTTGTCTGATGCAGAGTGGAGTAAGGATGTCC

mRNA sequence

ATGGAAATCTCATCTGCAAAATGGCTGTCTGAAATGGAACTGGAATCTTCATTCATGAATGATTTGGAAATGAACCCTTTTGAGTGCACACTAGAGGAGTTGAGTAGTTTCCAAACATTCTCCGACGAAAGCTACACATCCCACGTAGATCTAGACAATAGTTCTGTACAAACTCCGGCAGCACCGCCACCAGCAAAGCAGGCGAGGACCAGCAGCGGCTCAAGCCGTAGAATTTCTTCGATGGCGACTTCTTCTTCCTCGTCCCAAATCATTTCATTTGGGAACATTGAGATGTCCCCAATGGTTGCTCAACCTTCATATGACAACAACAACAACAACAATAAAACTTCAAATTATTATTGTTCACCAAATAAAAATCATGGGGTTGGAATCAAAAGGTCTGCTGCTGCAGCTATGAATAGTAATAATCGCAGCCCTTTGGTTGCTCAAGATCATGTCTTAGCTGAAAGAAAGCGTAGAGAAAAGCTTAGCCAGCGATTTGTTGCTCTTTCGGCCCTTATTCCAGATCTTAAAAAGATGGATAAAGCTTCCATTCTTGGGGATGCAATAACATACATCAAAGATCTTCAAGAACGTTTGAAGGTTGCAAACGAACAAGCAGCCAAAGCAACAGTGGAATCCGTGGTGTTTGTGAACAAATCTGACGATGCCTCTACCATCATCGCCAGTGACGATTCCTCAGAGGAAAACAGCTCCTCGTCGTCAGACGGAGCGATTCCGGACGTAGAAGCAAGAGTGTCTGGAAAGGATGTCCTTTTGAGGATTCATGGCAAGAAATGCAAAGGCTGTCTTTCAAATATACTAAATCAAATAGAGAAACTTAATCTCACAGTTCTCAACTCTAGTGCTTTGCCATTTGGCAATTTCAGGCTTGATATAACAATTATTGCTCAGATGGATGACGATTTTTCCATGACAGTGAAGGAACTAGTGCAGAAACTAAGACAAGCTTCTCTTGAATTTATGTAA

Coding sequence (CDS)

ATGGAAATCTCATCTGCAAAATGGCTGTCTGAAATGGAACTGGAATCTTCATTCATGAATGATTTGGAAATGAACCCTTTTGAGTGCACACTAGAGGAGTTGAGTAGTTTCCAAACATTCTCCGACGAAAGCTACACATCCCACGTAGATCTAGACAATAGTTCTGTACAAACTCCGGCAGCACCGCCACCAGCAAAGCAGGCGAGGACCAGCAGCGGCTCAAGCCGTAGAATTTCTTCGATGGCGACTTCTTCTTCCTCGTCCCAAATCATTTCATTTGGGAACATTGAGATGTCCCCAATGGTTGCTCAACCTTCATATGACAACAACAACAACAACAATAAAACTTCAAATTATTATTGTTCACCAAATAAAAATCATGGGGTTGGAATCAAAAGGTCTGCTGCTGCAGCTATGAATAGTAATAATCGCAGCCCTTTGGTTGCTCAAGATCATGTCTTAGCTGAAAGAAAGCGTAGAGAAAAGCTTAGCCAGCGATTTGTTGCTCTTTCGGCCCTTATTCCAGATCTTAAAAAGATGGATAAAGCTTCCATTCTTGGGGATGCAATAACATACATCAAAGATCTTCAAGAACGTTTGAAGGTTGCAAACGAACAAGCAGCCAAAGCAACAGTGGAATCCGTGGTGTTTGTGAACAAATCTGACGATGCCTCTACCATCATCGCCAGTGACGATTCCTCAGAGGAAAACAGCTCCTCGTCGTCAGACGGAGCGATTCCGGACGTAGAAGCAAGAGTGTCTGGAAAGGATGTCCTTTTGAGGATTCATGGCAAGAAATGCAAAGGCTGTCTTTCAAATATACTAAATCAAATAGAGAAACTTAATCTCACAGTTCTCAACTCTAGTGCTTTGCCATTTGGCAATTTCAGGCTTGATATAACAATTATTGCTCAGATGGATGACGATTTTTCCATGACAGTGAAGGAACTAGTGCAGAAACTAAGACAAGCTTCTCTTGAATTTATGTAA

Protein sequence

MEISSAKWLSEMELESSFMNDLEMNPFECTLEELSSFQTFSDESYTSHVDLDNSSVQTPAAPPPAKQARTSSGSSRRISSMATSSSSSQIISFGNIEMSPMVAQPSYDNNNNNNKTSNYYCSPNKNHGVGIKRSAAAAMNSNNRSPLVAQDHVLAERKRREKLSQRFVALSALIPDLKKMDKASILGDAITYIKDLQERLKVANEQAAKATVESVVFVNKSDDASTIIASDDSSEENSSSSSDGAIPDVEARVSGKDVLLRIHGKKCKGCLSNILNQIEKLNLTVLNSSALPFGNFRLDITIIAQMDDDFSMTVKELVQKLRQASLEFM

Homology

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BLAST of CsaV3_6G044570 vs. NCBI nr
Match: XP_004143425.1 (PREDICTED: transcription factor bHLH18-like [Cucumis sativus] >KGN48660.1 hypothetical protein Csa_6G497110 [Cucumis sativus])

HSP 1 Score: 463.8 bits (1192), Expect = 5.0e-127
Identity = 329/329 (100.00%), Postives = 329/329 (100.00%), Query Frame = 0


Query: 1   MEISSAKWLSEMELESSFMNDLEMNPFECTLEELSSFQTFSDESYTSHVDLDNSSVQTPX 60
           MEISSAKWLSEMELESSFMNDLEMNPFECTLEELSSFQTFSDESYTSHVDLDNSSVQTPX
Sbjct: 1   MEISSAKWLSEMELESSFMNDLEMNPFECTLEELSSFQTFSDESYTSHVDLDNSSVQTPX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFGNIEMSPMVAQPSXXXXXXXXXXXXXX 120
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFGNIEMSPMVAQPSXXXXXXXXXXXXXX
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFGNIEMSPMVAQPSXXXXXXXXXXXXXX 120

Query: 121 XSPNKNHGVGIKRSAAAAMNSNNRSPLVAQDHVLAERKRREKLSQRFVALSALIPDLKKM 180
           XSPNKNHGVGIKRSAAAAMNSNNRSPLVAQDHVLAERKRREKLSQRFVALSALIPDLKKM
Sbjct: 121 XSPNKNHGVGIKRSAAAAMNSNNRSPLVAQDHVLAERKRREKLSQRFVALSALIPDLKKM 180

Query: 181 DKASILGDAITYIKDLQERLKVANEQAAKATVESVVFVNKXXXXXXXXXXXXXXXXXXXX 240
           DKASILGDAITYIKDLQERLKVANEQAAKATVESVVFVNKXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 DKASILGDAITYIKDLQERLKVANEQAAKATVESVVFVNKXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXXGAIPDVEARVSGKDVLLRIHGKKCKGCLSNILNQIEKLNLTVLNSSALPFGNFRLDI 300
           XXXGAIPDVEARVSGKDVLLRIHGKKCKGCLSNILNQIEKLNLTVLNSSALPFGNFRLDI
Sbjct: 241 XXXGAIPDVEARVSGKDVLLRIHGKKCKGCLSNILNQIEKLNLTVLNSSALPFGNFRLDI 300

Query: 301 TIIAQMDDDFSMTVKELVQKLRQASLEFM 330
           TIIAQMDDDFSMTVKELVQKLRQASLEFM
Sbjct: 301 TIIAQMDDDFSMTVKELVQKLRQASLEFM 329

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BLAST of CsaV3_6G044570 vs. NCBI nr
Match: XP_008440467.1 (PREDICTED: transcription factor bHLH18-like [Cucumis melo] >XP_016899206.1 PREDICTED: transcription factor bHLH18-like [Cucumis melo])

HSP 1 Score: 427.2 bits (1097), Expect = 5.2e-116
Identity = 274/329 (83.28%), Postives = 282/329 (85.71%), Query Frame = 0


Query: 1   MEISSAKWLSEMELESSFMNDLEMNPFECTLEELSSFQTFSDESYTSHVDLDNSSVQTPX 60
           MEISSA WLSEMELESSFMNDLEMNPFECTLEELSSFQTFSDESYTSHVDLDN+SVQTP 
Sbjct: 1   MEISSANWLSEMELESSFMNDLEMNPFECTLEELSSFQTFSDESYTSHVDLDNNSVQTP- 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFGNIEMSPMVAQPSXXXXXXXXXXXXXX 120
                              XXXXXXXXX    FGN+E+S MVAQPS              
Sbjct: 61  TAPPPAKQARTSGSSRRIAXXXXXXXXXQIISFGNVELSSMVAQPS-YDNKNNNKTPNYY 120

Query: 121 XSPNKNHGVGIKRSAAAAMNSNNRSPLVAQDHVLAERKRREKLSQRFVALSALIPDLKKM 180
            SPNKNHGVGIKRS  AAMNSNNRSPLVAQ+HVLAERKRREKLSQRFVALSALIPDLKKM
Sbjct: 121 CSPNKNHGVGIKRS-VAAMNSNNRSPLVAQEHVLAERKRREKLSQRFVALSALIPDLKKM 180

Query: 181 DKASILGDAITYIKDLQERLKVANEQAAKATVESVVFVNKXXXXXXXXXXXXXXXXXXXX 240
           DKASILGDAITYIKDLQERLKVANEQAAKATVESVVFVNK  XXXXXXXXXXXXXXXXXX
Sbjct: 181 DKASILGDAITYIKDLQERLKVANEQAAKATVESVVFVNKSEXXXXXXXXXXXXXXXXXX 240

Query: 241 XXXGAIPDVEARVSGKDVLLRIHGKKCKGCLSNILNQIEKLNLTVLNSSALPFGNFRLDI 300
           XXXGAIPDVEARVSGKDVLL+IH KKC GCLSNILNQIEKLNLTVLNSSALPFGNFR+DI
Sbjct: 241 XXXGAIPDVEARVSGKDVLLKIHCKKCTGCLSNILNQIEKLNLTVLNSSALPFGNFRVDI 300

Query: 301 TIIAQMDDDFSMTVKELVQKLRQASLEFM 330
           TIIAQMDDDFS+TVKELVQKLRQASL+FM
Sbjct: 301 TIIAQMDDDFSITVKELVQKLRQASLKFM 326

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BLAST of CsaV3_6G044570 vs. NCBI nr
Match: XP_022132561.1 (transcription factor bHLH19-like isoform X2 [Momordica charantia])

HSP 1 Score: 345.9 bits (886), Expect = 1.5e-91
Identity = 213/350 (60.86%), Postives = 232/350 (66.29%), Query Frame = 0


Query: 1   MEISSAKWLSEMELESSFMNDLEMNPFECTLEELSSFQTFSDESYTSHVDLDNSSVQTPX 60
           MEISSAKWLSEMELES+FM+D +MNPFECTLEEL SFQTFSDESYTSH DLDNSSV+TP 
Sbjct: 1   MEISSAKWLSEMELESAFMDDFQMNPFECTLEEL-SFQTFSDESYTSHADLDNSSVKTPP 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXF----------------------GNIEM 120
                                                                  GNI++
Sbjct: 61  AKQPKTAANNRQIASMAASSSSSHIISFGNSHSAKVNDNGVNYSNVKPKFEMGCEGNIDL 120

Query: 121 SPMVAQPSXXXXXXXXXXXXXXXSPNKNHGVGIKRSAAAAMNSNNRSPLVAQDHVLAERK 180
           S ++AQ                   ++ +G GIKR A       NRSPLVAQDHVLAERK
Sbjct: 121 SSVIAQGGSNENQNYC---------SQKYGQGIKRGAGCL----NRSPLVAQDHVLAERK 180

Query: 181 RREKLSQRFVALSALIPDLKKMDKASILGDAITYIKDLQERLKVANEQ-AAKATVESVVF 240
           RREKLSQRFVALSALIP LKKMDKASILGDAITYIKDLQERL+VA+EQ AAKATVESVVF
Sbjct: 181 RREKLSQRFVALSALIPHLKKMDKASILGDAITYIKDLQERLRVADEQLAAKATVESVVF 240

Query: 241 VNKXXXXXXXXXXXXXXXXXXXXXXXGAIPDVEARVSGKDVLLRIHGKKCKGCLSNILNQ 300
            N+                        AIPD+EARVSGKDVLLRIHGK+CKGCLSNIL +
Sbjct: 241 ANRSSDDLSSGGSDVSSDENSSPDR--AIPDIEARVSGKDVLLRIHGKRCKGCLSNILKE 300

Query: 301 IEKLNLTVLNSSALPFGNFRLDITIIAQMDDDFSMTVKELVQKLRQASLE 328
           IEKLNLTVLNSSALPFG+ RLDITIIAQM+DDFSMTVKELVQKLRQASLE
Sbjct: 301 IEKLNLTVLNSSALPFGHSRLDITIIAQMEDDFSMTVKELVQKLRQASLE 334

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BLAST of CsaV3_6G044570 vs. NCBI nr
Match: XP_022950460.1 (transcription factor bHLH19-like [Cucurbita moschata])

HSP 1 Score: 323.9 bits (829), Expect = 6.2e-85
Identity = 240/369 (65.04%), Postives = 269/369 (72.90%), Query Frame = 0


Query: 1   MEISSAKWLSEMELESSFMNDLEMNPFECTLEELSSFQTFSDESYTSHVDLDNSSVQTPX 60
           MEISSAKWLS+M+LES+FM+D EMNPFECTL+EL SFQTFSDES+TSH+DL+N SVQT X
Sbjct: 1   MEISSAKWLSDMDLESAFMDDFEMNPFECTLDEL-SFQTFSDESHTSHLDLEN-SVQTXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXF--------------------------- 120
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                            
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGNNGNYSN 120

Query: 121 ----------GNIEMSPMVAQPSXXXXXXXXXXXXXXXSPN---KNHGVGIKRSAAAAMN 180
                     GNI++S ++ Q S               +PN   K  GVG+KR A+A   
Sbjct: 121 VKPKFEIGCEGNIDLSSVIPQGS------------YENNPNCSPKYDGVGMKRGASA--- 180

Query: 181 SNNRSPLVAQDHVLAERKRREKLSQRFVALSALIPDLKKMDKASILGDAITYIKDLQERL 240
            N R+ LVAQDHV+AERKRREKLSQRFVALSALIP LKKMDKASILGDAITYIKDLQ+RL
Sbjct: 181 MNYRTALVAQDHVIAERKRREKLSQRFVALSALIPHLKKMDKASILGDAITYIKDLQDRL 240

Query: 241 KVANEQAAKATVESVVFVNKXXXXXXXXXXXXXXXXXXXXXXXGAIPDVEARVSGKDVLL 300
           KVA+E+AAK+ VESVVFVN+             XX         AIP++EARVSGKDVLL
Sbjct: 241 KVADEEAAKSRVESVVFVNRSEDVSAVVEDDSSXXNSSSDR---AIPEIEARVSGKDVLL 300

Query: 301 RIHGKKCKGCLSNILNQIEKLNLTVLNSSALPFGNFRLDITIIAQMDDDFSMTVKELVQK 330
           +IHGKKCKGCLSNILN IE+LNLTVLNSSALPFGNFR+DITIIAQM D FSMTVKELVQK
Sbjct: 301 KIHGKKCKGCLSNILNHIEELNLTVLNSSALPFGNFRIDITIIAQMGDGFSMTVKELVQK 349

[Close]

BLAST of CsaV3_6G044570 vs. NCBI nr
Match: XP_023543197.1 (transcription factor bHLH19-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 322.4 bits (825), Expect = 1.8e-84
Identity = 240/371 (64.69%), Postives = 268/371 (72.24%), Query Frame = 0


Query: 1   MEISSAKWLSEMELESSFMNDLEMNPFECTLEELSSFQTFSDESYTSHVDLDNSSVQTPX 60
           MEISSAKWLS+M+LES+FM+D EMNPFECTL+EL SFQTFSDES+TSH+DL+N SVQT X
Sbjct: 1   MEISSAKWLSDMDLESAFMDDFEMNPFECTLDEL-SFQTFSDESHTSHLDLEN-SVQTXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXF--------------------------- 120
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                            
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGNNGNY 120

Query: 121 ------------GNIEMSPMVAQPSXXXXXXXXXXXXXXXSPN---KNHGVGIKRSAAAA 180
                       GNI++S  + Q S               +PN   K  GVG+KRSA+A 
Sbjct: 121 SNVKPKFEIGCEGNIDLSSAIPQGS------------YENNPNGSPKYDGVGMKRSASA- 180

Query: 181 MNSNNRSPLVAQDHVLAERKRREKLSQRFVALSALIPDLKKMDKASILGDAITYIKDLQE 240
              N R+ LVAQDHV+AERKRREKLSQRFVALSALIP LKKMDKASILGDAITYIKDLQ+
Sbjct: 181 --MNYRTALVAQDHVIAERKRREKLSQRFVALSALIPHLKKMDKASILGDAITYIKDLQD 240

Query: 241 RLKVANEQAAKATVESVVFVNKXXXXXXXXXXXXXXXXXXXXXXXGAIPDVEARVSGKDV 300
           RLKVA+E+AAK+ VESVVFVN+             XX         AIP++EARVSGKDV
Sbjct: 241 RLKVADEEAAKSRVESVVFVNRSEDVSAVVEDDSSXXNSSSDR---AIPEIEARVSGKDV 300

Query: 301 LLRIHGKKCKGCLSNILNQIEKLNLTVLNSSALPFGNFRLDITIIAQMDDDFSMTVKELV 330
           LL+IHGKKCKGCLSNILN IE+LNLTVLNSSALPFGNFR+DITIIAQM D FSMTVKELV
Sbjct: 301 LLKIHGKKCKGCLSNILNHIEELNLTVLNSSALPFGNFRIDITIIAQMGDGFSMTVKELV 351

[Close]

BLAST of CsaV3_6G044570 vs. TAIR10
Match: AT2G22760.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 157.5 bits (397), Expect = 1.4e-38
Identity = 93/199 (46.73%), Postives = 129/199 (64.82%), Query Frame = 0


Query: 128 GVGIKRSAAAAMNSNNRSPLVAQDHVLAERKRREKLSQRFVALSALIPDLKKMDKASILG 187
           G G KR      +   RSP++A++HVLAERKRREKLS++F+ALSAL+P LKK DK +IL 
Sbjct: 99  GRGTKRKTC---SHGTRSPVLAKEHVLAERKRREKLSEKFIALSALLPGLKKADKVTILD 158

Query: 188 DAITYIKDLQERLK-VANEQAAKATVESVVFVNKXXXXXXXXXXXXXXXXXXXXXXXGAI 247
           DAI+ +K LQE+L+ +  E+ A   +ES++ V K                        A+
Sbjct: 159 DAISRMKQLQEQLRTLKEEKEATRQMESMILVKKSKVFFDEEPNLSCSPSVHIEFDQ-AL 218

Query: 248 PDVEARVSGKDVLLRIHGKKCKGCLSNILNQIEKLNLTVLNSSALPFGNFRLDITIIAQM 307
           P++EA++S  D+L+RI  +K KGC+ NILN IE   L + NS  LPFG+  LDIT++AQM
Sbjct: 219 PEIEAKISQNDILIRILCEKSKGCMINILNTIENFQLRIENSIVLPFGDSTLDITVLAQM 278

Query: 308 DDDFSMTV-KELVQKLRQA 325
           D DFSM++ K+LV+ LR A
Sbjct: 279 DKDFSMSILKDLVRNLRLA 293

[Close]

BLAST of CsaV3_6G044570 vs. TAIR10
Match: AT4G37850.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 146.4 bits (368), Expect = 3.2e-35
Identity = 111/335 (33.13%), Postives = 162/335 (48.36%), Query Frame = 0


Query: 1   MEISSAKWLSEMEL-ESSFMNDLEMNPFECTLEELS-----SFQTFSDESYTSHVDLDNS 60
           M I S +W SE E+ E+S +    MN     ++E       SF T +D SY   +++   
Sbjct: 1   MSILSTRWFSEQEIEENSIIQQFHMNSIVGEVQEAQYIFPHSFTTNNDPSYDDLIEMKPP 60

Query: 61  SVQTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFGNIEMSPMVAQPSXXXXXXXX 120
            +                                      ++E        +        
Sbjct: 61  KILETTYISPSSHLPPNSKPHHIHRHSSSRILSFEDYGSNDMEHEYSPTYLNSIFSPKLE 120

Query: 121 XXXXXXXSPNKNHGVGIKRSAAAAMNSNNRSPLVAQDHVLAERKRREKLSQRFVALSALI 180
                    ++ +  G KR+   + N +N     AQDH++AERKRREKL+QRFVALSAL+
Sbjct: 121 AQVQPHQKSDEFNRKGTKRAQPFSRNQSN-----AQDHIIAERKRREKLTQRFVALSALV 180

Query: 181 PDLKKMDKASILGDAITYIKDLQERLKVANEQAAKATVESVVFVNKXXXXXXXXXXXXXX 240
           P LKKMDKAS+LGDA+ +IK LQER+    EQ  +  +ES+V V K              
Sbjct: 181 PGLKKMDKASVLGDALKHIKYLQERVGELEEQKKERRLESMVLVKKSKLILDDNNQSFSS 240

Query: 241 XXXXXXXXXGAIPDVEARVSGKDVLLRIHGKKCKGCLSNILNQIEKLNLTVLNSSALPFG 300
                      +P++E R S +DVL++I  +K KG L+ I+ +IEKL++ + NSS L FG
Sbjct: 241 SCEDGFSDLD-LPEIEVRFSDEDVLIKILCEKQKGHLAKIMAEIEKLHILITNSSVLNFG 300

Query: 301 NFRLDITIIAQMDDDFSMTVKELVQKLRQASLEFM 330
              LDITIIA+ + DF MT+ ++V+ LR A   F+
Sbjct: 301 P-TLDITIIAKKESDFDMTLMDVVKSLRSALSNFI 328

[Close]

BLAST of CsaV3_6G044570 vs. TAIR10
Match: AT2G22750.2 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 131.7 bits (330), Expect = 8.2e-31
Identity = 107/194 (55.15%), Postives = 137/194 (70.62%), Query Frame = 0


Query: 130 GIKRSAAAAMNSNNRSPLVAQDHVLAERKRREKLSQRFVALSALIPDLKKMDKASILGDA 189
           G KR+ +   + +N     AQDH+LAERKRREKL+QRFVALSALIP LKKMDKAS+LGDA
Sbjct: 110 GTKRAQSLTRSQSN-----AQDHILAERKRREKLTQRFVALSALIPGLKKMDKASVLGDA 169

Query: 190 ITYIKDLQERLK--VANEQAAKATVESVVFVNKXXXXXXXXXXXXXXXXXXXXXXXGAIP 249
           I +IK LQE +K                     XXXXXXXXXXXXXXXXXXXXXXX  +P
Sbjct: 170 IKHIKYLQESVKEYEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLP 229

Query: 250 DVEARVSGKDVLLRIHGKKCKGCLSNILNQIEKLNLTVLNSSALPFGNFRLDITIIAQMD 309
           ++E RVSGKDVL++I  +K KG +  I+ +IEKL L++ NS+ LPFG    DI+IIAQ +
Sbjct: 230 EIEVRVSGKDVLIKILCEKQKGNVIKIMGEIEKLGLSITNSNVLPFGP-TFDISIIAQKN 289

Query: 310 DDFSMTVKELVQKL 322
           ++F M ++++V+ L
Sbjct: 290 NNFDMKIEDVVKNL 297

[Close]

BLAST of CsaV3_6G044570 vs. TAIR10
Match: AT2G22770.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 130.6 bits (327), Expect = 1.8e-30
Identity = 105/211 (49.76%), Postives = 136/211 (64.45%), Query Frame = 0


Query: 129 VGIKRSAAAAMNSNNRSPLVAQDHVLAERKRREKLSQRFVALSALIPDLKKMDKASILGD 188
           VG KR      N   R P + ++HVLAERKRR+KL++R +ALSAL+P LKK DKA++L D
Sbjct: 111 VGSKRK-DCVNNGGRREPHLLKEHVLAERKRRQKLNERLIALSALLPGLKKTDKATVLED 170

Query: 189 AITYIKDLQERLKVANEQAAKATVESVVFVNKXXXXXXXXXXXXXXXXXXXXXXXG---- 248
           AI ++K LQER+K                   XXXXXXXXXXXXXXXXXXXXXXX     
Sbjct: 171 AIKHLKQLQERVKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 230

Query: 249 --------AIPDVEARVSGKDVLLRIHGKKCKGCLSNILNQIEKLNLTVLNSSALPFGNF 308
                    +P +EARVS +D+L+R+H +K KGC+  IL+ +EK  L V+NS  LPFGN 
Sbjct: 231 DEVSIFKQTMPMIEARVSDRDLLIRVHCEKNKGCMIKILSSLEKFRLEVVNSFTLPFGNS 290

Query: 309 RLDITIIAQMDDDFSMTVKELVQKLRQASLE 328
            L ITI+ +MD+ FS  V+E+V+ +R A  E
Sbjct: 291 TLVITILTKMDNKFSRPVEEVVKNIRVALAE 320

[Close]

BLAST of CsaV3_6G044570 vs. TAIR10
Match: AT2G46510.1 (ABA-inducible BHLH-type transcription factor)

HSP 1 Score: 75.1 bits (183), Expect = 9.1e-14
Identity = 34/56 (60.71%), Postives = 50/56 (89.29%), Query Frame = 0


Query: 151 DHVLAERKRREKLSQRFVALSALIPDLKKMDKASILGDAITYIKDLQERLKVANEQ 207
           +HV AER+RREKL+QRF AL +++P++ KMDKAS+LGDAI+YIK+LQE++K+  ++
Sbjct: 395 NHVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAISYIKELQEKVKIMEDE 450

[Close]

BLAST of CsaV3_6G044570 vs. Swiss-Prot
Match: sp|Q1PF16|BH019_ARATH (Transcription factor bHLH19 OS=Arabidopsis thaliana OX=3702 GN=BHLH19 PE=1 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 2.5e-37
Identity = 93/199 (46.73%), Postives = 129/199 (64.82%), Query Frame = 0


Query: 128 GVGIKRSAAAAMNSNNRSPLVAQDHVLAERKRREKLSQRFVALSALIPDLKKMDKASILG 187
           G G KR      +   RSP++A++HVLAERKRREKLS++F+ALSAL+P LKK DK +IL 
Sbjct: 99  GRGTKRKTC---SHGTRSPVLAKEHVLAERKRREKLSEKFIALSALLPGLKKADKVTILD 158

Query: 188 DAITYIKDLQERLK-VANEQAAKATVESVVFVNKXXXXXXXXXXXXXXXXXXXXXXXGAI 247
           DAI+ +K LQE+L+ +  E+ A   +ES++ V K                        A+
Sbjct: 159 DAISRMKQLQEQLRTLKEEKEATRQMESMILVKKSKVFFDEEPNLSCSPSVHIEFDQ-AL 218

Query: 248 PDVEARVSGKDVLLRIHGKKCKGCLSNILNQIEKLNLTVLNSSALPFGNFRLDITIIAQM 307
           P++EA++S  D+L+RI  +K KGC+ NILN IE   L + NS  LPFG+  LDIT++AQM
Sbjct: 219 PEIEAKISQNDILIRILCEKSKGCMINILNTIENFQLRIENSIVLPFGDSTLDITVLAQM 278

Query: 308 DDDFSMTV-KELVQKLRQA 325
           D DFSM++ K+LV+ LR A
Sbjct: 279 DKDFSMSILKDLVRNLRLA 293

[Close]

BLAST of CsaV3_6G044570 vs. Swiss-Prot
Match: sp|Q9T072|BH025_ARATH (Transcription factor bHLH25 OS=Arabidopsis thaliana OX=3702 GN=BHLH25 PE=2 SV=2)

HSP 1 Score: 146.4 bits (368), Expect = 5.8e-34
Identity = 111/335 (33.13%), Postives = 162/335 (48.36%), Query Frame = 0


Query: 1   MEISSAKWLSEMEL-ESSFMNDLEMNPFECTLEELS-----SFQTFSDESYTSHVDLDNS 60
           M I S +W SE E+ E+S +    MN     ++E       SF T +D SY   +++   
Sbjct: 1   MSILSTRWFSEQEIEENSIIQQFHMNSIVGEVQEAQYIFPHSFTTNNDPSYDDLIEMKPP 60

Query: 61  SVQTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFGNIEMSPMVAQPSXXXXXXXX 120
            +                                      ++E        +        
Sbjct: 61  KILETTYISPSSHLPPNSKPHHIHRHSSSRILSFEDYGSNDMEHEYSPTYLNSIFSPKLE 120

Query: 121 XXXXXXXSPNKNHGVGIKRSAAAAMNSNNRSPLVAQDHVLAERKRREKLSQRFVALSALI 180
                    ++ +  G KR+   + N +N     AQDH++AERKRREKL+QRFVALSAL+
Sbjct: 121 AQVQPHQKSDEFNRKGTKRAQPFSRNQSN-----AQDHIIAERKRREKLTQRFVALSALV 180

Query: 181 PDLKKMDKASILGDAITYIKDLQERLKVANEQAAKATVESVVFVNKXXXXXXXXXXXXXX 240
           P LKKMDKAS+LGDA+ +IK LQER+    EQ  +  +ES+V V K              
Sbjct: 181 PGLKKMDKASVLGDALKHIKYLQERVGELEEQKKERRLESMVLVKKSKLILDDNNQSFSS 240

Query: 241 XXXXXXXXXGAIPDVEARVSGKDVLLRIHGKKCKGCLSNILNQIEKLNLTVLNSSALPFG 300
                      +P++E R S +DVL++I  +K KG L+ I+ +IEKL++ + NSS L FG
Sbjct: 241 SCEDGFSDLD-LPEIEVRFSDEDVLIKILCEKQKGHLAKIMAEIEKLHILITNSSVLNFG 300

Query: 301 NFRLDITIIAQMDDDFSMTVKELVQKLRQASLEFM 330
              LDITIIA+ + DF MT+ ++V+ LR A   F+
Sbjct: 301 P-TLDITIIAKKESDFDMTLMDVVKSLRSALSNFI 328

[Close]

BLAST of CsaV3_6G044570 vs. Swiss-Prot
Match: sp|Q1PF17|BH018_ARATH (Transcription factor bHLH18 OS=Arabidopsis thaliana OX=3702 GN=BHLH18 PE=1 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 1.5e-29
Identity = 107/194 (55.15%), Postives = 137/194 (70.62%), Query Frame = 0


Query: 130 GIKRSAAAAMNSNNRSPLVAQDHVLAERKRREKLSQRFVALSALIPDLKKMDKASILGDA 189
           G KR+ +   + +N     AQDH+LAERKRREKL+QRFVALSALIP LKKMDKAS+LGDA
Sbjct: 110 GTKRAQSLTRSQSN-----AQDHILAERKRREKLTQRFVALSALIPGLKKMDKASVLGDA 169

Query: 190 ITYIKDLQERLK--VANEQAAKATVESVVFVNKXXXXXXXXXXXXXXXXXXXXXXXGAIP 249
           I +IK LQE +K                     XXXXXXXXXXXXXXXXXXXXXXX  +P
Sbjct: 170 IKHIKYLQESVKEYEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLP 229

Query: 250 DVEARVSGKDVLLRIHGKKCKGCLSNILNQIEKLNLTVLNSSALPFGNFRLDITIIAQMD 309
           ++E RVSGKDVL++I  +K KG +  I+ +IEKL L++ NS+ LPFG    DI+IIAQ +
Sbjct: 230 EIEVRVSGKDVLIKILCEKQKGNVIKIMGEIEKLGLSITNSNVLPFGP-TFDISIIAQKN 289

Query: 310 DDFSMTVKELVQKL 322
           ++F M ++++V+ L
Sbjct: 290 NNFDMKIEDVVKNL 297

[Close]

BLAST of CsaV3_6G044570 vs. Swiss-Prot
Match: sp|Q8S3F1|BH020_ARATH (Transcription factor NAI1 OS=Arabidopsis thaliana OX=3702 GN=NAI1 PE=2 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 3.3e-29
Identity = 105/211 (49.76%), Postives = 136/211 (64.45%), Query Frame = 0


Query: 129 VGIKRSAAAAMNSNNRSPLVAQDHVLAERKRREKLSQRFVALSALIPDLKKMDKASILGD 188
           VG KR      N   R P + ++HVLAERKRR+KL++R +ALSAL+P LKK DKA++L D
Sbjct: 111 VGSKRK-DCVNNGGRREPHLLKEHVLAERKRRQKLNERLIALSALLPGLKKTDKATVLED 170

Query: 189 AITYIKDLQERLKVANEQAAKATVESVVFVNKXXXXXXXXXXXXXXXXXXXXXXXG---- 248
           AI ++K LQER+K                   XXXXXXXXXXXXXXXXXXXXXXX     
Sbjct: 171 AIKHLKQLQERVKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 230

Query: 249 --------AIPDVEARVSGKDVLLRIHGKKCKGCLSNILNQIEKLNLTVLNSSALPFGNF 308
                    +P +EARVS +D+L+R+H +K KGC+  IL+ +EK  L V+NS  LPFGN 
Sbjct: 231 DEVSIFKQTMPMIEARVSDRDLLIRVHCEKNKGCMIKILSSLEKFRLEVVNSFTLPFGNS 290

Query: 309 RLDITIIAQMDDDFSMTVKELVQKLRQASLE 328
            L ITI+ +MD+ FS  V+E+V+ +R A  E
Sbjct: 291 TLVITILTKMDNKFSRPVEEVVKNIRVALAE 320

[Close]

BLAST of CsaV3_6G044570 vs. Swiss-Prot
Match: sp|Q9ZPY8|AIB_ARATH (Transcription factor ABA-INDUCIBLE bHLH-TYPE OS=Arabidopsis thaliana OX=3702 GN=AIB PE=2 SV=2)

HSP 1 Score: 75.1 bits (183), Expect = 1.6e-12
Identity = 34/56 (60.71%), Postives = 50/56 (89.29%), Query Frame = 0


Query: 151 DHVLAERKRREKLSQRFVALSALIPDLKKMDKASILGDAITYIKDLQERLKVANEQ 207
           +HV AER+RREKL+QRF AL +++P++ KMDKAS+LGDAI+YIK+LQE++K+  ++
Sbjct: 395 NHVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAISYIKELQEKVKIMEDE 450

[Close]

BLAST of CsaV3_6G044570 vs. TrEMBL
Match: tr|A0A0A0KG27|A0A0A0KG27_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G497110 PE=4 SV=1)

HSP 1 Score: 463.8 bits (1192), Expect = 3.3e-127
Identity = 329/329 (100.00%), Postives = 329/329 (100.00%), Query Frame = 0


Query: 1   MEISSAKWLSEMELESSFMNDLEMNPFECTLEELSSFQTFSDESYTSHVDLDNSSVQTPX 60
           MEISSAKWLSEMELESSFMNDLEMNPFECTLEELSSFQTFSDESYTSHVDLDNSSVQTPX
Sbjct: 1   MEISSAKWLSEMELESSFMNDLEMNPFECTLEELSSFQTFSDESYTSHVDLDNSSVQTPX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFGNIEMSPMVAQPSXXXXXXXXXXXXXX 120
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFGNIEMSPMVAQPSXXXXXXXXXXXXXX
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFGNIEMSPMVAQPSXXXXXXXXXXXXXX 120

Query: 121 XSPNKNHGVGIKRSAAAAMNSNNRSPLVAQDHVLAERKRREKLSQRFVALSALIPDLKKM 180
           XSPNKNHGVGIKRSAAAAMNSNNRSPLVAQDHVLAERKRREKLSQRFVALSALIPDLKKM
Sbjct: 121 XSPNKNHGVGIKRSAAAAMNSNNRSPLVAQDHVLAERKRREKLSQRFVALSALIPDLKKM 180

Query: 181 DKASILGDAITYIKDLQERLKVANEQAAKATVESVVFVNKXXXXXXXXXXXXXXXXXXXX 240
           DKASILGDAITYIKDLQERLKVANEQAAKATVESVVFVNKXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 DKASILGDAITYIKDLQERLKVANEQAAKATVESVVFVNKXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXXGAIPDVEARVSGKDVLLRIHGKKCKGCLSNILNQIEKLNLTVLNSSALPFGNFRLDI 300
           XXXGAIPDVEARVSGKDVLLRIHGKKCKGCLSNILNQIEKLNLTVLNSSALPFGNFRLDI
Sbjct: 241 XXXGAIPDVEARVSGKDVLLRIHGKKCKGCLSNILNQIEKLNLTVLNSSALPFGNFRLDI 300

Query: 301 TIIAQMDDDFSMTVKELVQKLRQASLEFM 330
           TIIAQMDDDFSMTVKELVQKLRQASLEFM
Sbjct: 301 TIIAQMDDDFSMTVKELVQKLRQASLEFM 329

[Close]

BLAST of CsaV3_6G044570 vs. TrEMBL
Match: tr|A0A1S4DT89|A0A1S4DT89_CUCME (transcription factor bHLH18-like OS=Cucumis melo OX=3656 GN=LOC103484896 PE=4 SV=1)

HSP 1 Score: 427.2 bits (1097), Expect = 3.4e-116
Identity = 274/329 (83.28%), Postives = 282/329 (85.71%), Query Frame = 0


Query: 1   MEISSAKWLSEMELESSFMNDLEMNPFECTLEELSSFQTFSDESYTSHVDLDNSSVQTPX 60
           MEISSA WLSEMELESSFMNDLEMNPFECTLEELSSFQTFSDESYTSHVDLDN+SVQTP 
Sbjct: 1   MEISSANWLSEMELESSFMNDLEMNPFECTLEELSSFQTFSDESYTSHVDLDNNSVQTP- 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFGNIEMSPMVAQPSXXXXXXXXXXXXXX 120
                              XXXXXXXXX    FGN+E+S MVAQPS              
Sbjct: 61  TAPPPAKQARTSGSSRRIAXXXXXXXXXQIISFGNVELSSMVAQPS-YDNKNNNKTPNYY 120

Query: 121 XSPNKNHGVGIKRSAAAAMNSNNRSPLVAQDHVLAERKRREKLSQRFVALSALIPDLKKM 180
            SPNKNHGVGIKRS  AAMNSNNRSPLVAQ+HVLAERKRREKLSQRFVALSALIPDLKKM
Sbjct: 121 CSPNKNHGVGIKRS-VAAMNSNNRSPLVAQEHVLAERKRREKLSQRFVALSALIPDLKKM 180

Query: 181 DKASILGDAITYIKDLQERLKVANEQAAKATVESVVFVNKXXXXXXXXXXXXXXXXXXXX 240
           DKASILGDAITYIKDLQERLKVANEQAAKATVESVVFVNK  XXXXXXXXXXXXXXXXXX
Sbjct: 181 DKASILGDAITYIKDLQERLKVANEQAAKATVESVVFVNKSEXXXXXXXXXXXXXXXXXX 240

Query: 241 XXXGAIPDVEARVSGKDVLLRIHGKKCKGCLSNILNQIEKLNLTVLNSSALPFGNFRLDI 300
           XXXGAIPDVEARVSGKDVLL+IH KKC GCLSNILNQIEKLNLTVLNSSALPFGNFR+DI
Sbjct: 241 XXXGAIPDVEARVSGKDVLLKIHCKKCTGCLSNILNQIEKLNLTVLNSSALPFGNFRVDI 300

Query: 301 TIIAQMDDDFSMTVKELVQKLRQASLEFM 330
           TIIAQMDDDFS+TVKELVQKLRQASL+FM
Sbjct: 301 TIIAQMDDDFSITVKELVQKLRQASLKFM 326

[Close]

BLAST of CsaV3_6G044570 vs. TrEMBL
Match: tr|A0A2P6RPH5|A0A2P6RPH5_ROSCH (Putative transcription factor bHLH family OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr2g0109611 PE=4 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 3.5e-60
Identity = 160/356 (44.94%), Postives = 204/356 (57.30%), Query Frame = 0


Query: 3   ISSAKWLSEMELES-SFMNDLEMNP-FECTLEELSSFQTFSDESYTSHV-------DLDN 62
           ISSAKW+SE+E+E  +F+N  EMN   + +LE+L +FQ+FS ESY+S+        D+D 
Sbjct: 4   ISSAKWVSELEMEDPTFLNQYEMNSHLDYSLEDL-NFQSFSAESYSSYPDFTPHQNDVDQ 63

Query: 63  SSVQTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFGNIEMS-------PMVAQPS 122
              + P                                 F N   S           +P 
Sbjct: 64  RPAKQPKNNHSNWNSCTTTHDHIITVPRASSSASSHLISFDNSNSSAYGSLDCTTTVKPK 123

Query: 123 -------------XXXXXXXXXXXXXXXSPNKNHGVGIKRSAAAAMNSNNRSPLVAQDHV 182
                                       SPN+ +G GIKR+A        RSPL AQDHV
Sbjct: 124 NEVLGSGGKLNSISNMISQGNSYDPQTCSPNRAYGQGIKRAATV-----TRSPLHAQDHV 183

Query: 183 LAERKRREKLSQRFVALSALIPDLKKMDKASILGDAITYIKDLQERLKVANEQAAKATVE 242
           LAERKRREKLSQRF+ALSAL+P LKKMDKAS+LGDAI Y+K LQER+K+  EQAAK TVE
Sbjct: 184 LAERKRREKLSQRFIALSALVPGLKKMDKASVLGDAIKYVKQLQERMKILEEQAAKKTVE 243

Query: 243 SVVFVNKXXXXXXXXXXXXXXXXXXXXXXXGAIPDVEARVSGKDVLLRIHGKKCKGCLSN 302
           SVVFV +                         +P++EARVS K+VLLRIH +K KGCL+N
Sbjct: 244 SVVFVKRTQYSVDDDISSSDENFDSCSDQ--PLPEIEARVSDKEVLLRIHCEKKKGCLAN 303

Query: 303 ILNQIEKLNLTVLNSSALPFGNFRLDITIIAQMDDDFSMTVKELVQKLRQASLEFM 330
           IL++IEKL+LT+LNSS LPFGN  LDIT+++Q+D ++SMTVKELV+KLRQA L+ +
Sbjct: 304 ILSEIEKLDLTILNSSVLPFGNSTLDITVVSQIDVEYSMTVKELVRKLRQALLKLV 351

[Close]

BLAST of CsaV3_6G044570 vs. TrEMBL
Match: tr|A0A251NTJ5|A0A251NTJ5_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_6G212000 PE=4 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 2.6e-55
Identity = 175/366 (47.81%), Postives = 228/366 (62.30%), Query Frame = 0


Query: 3   ISSAKWLSEMELES-SFMNDLEMNPFECTLEELSSFQTFSDESYTSHV--------DLDN 62
           ISSAKW+S++E+E  +F++  EMN  + +L++L +FQ+FS ESY+S+         +  N
Sbjct: 4   ISSAKWVSDLEMEDPTFIHQYEMNSLDYSLDDL-NFQSFSSESYSSYPNFTPKATHNFSN 63

Query: 63  SSVQTP------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 122
           +S++TP                                XXXXXXXXXXXXXXXXXXXXXX
Sbjct: 64  ASIETPQQAGTHERPAKQPKNHTTWNPCTTDHTIMAKAXXXXXXXXXXXXXXXXXXXXXX 123

Query: 123 XXXFGNIE--MSPM-VAQPSXXXXXXXXXXXXXXXSP---NKNHGVGIKRSAAAAMNSNN 182
           XX +G ++  M P    + S                P   +  HG GIKR+A        
Sbjct: 124 XXFYGTLDNTMKPKNEVEYSNGKLNLTTLISQGSYDPQTCSPKHGQGIKRAATV-----T 183

Query: 183 RSPLVAQDHVLAERKRREKLSQRFVALSALIPDLKKMDKASILGDAITYIKDLQERLKVA 242
           RSPL AQDHVLAERKRREKLSQRF+ALSAL+P LKKMDKAS+LGDAI Y+K LQER K+ 
Sbjct: 184 RSPLHAQDHVLAERKRREKLSQRFIALSALVPGLKKMDKASVLGDAIKYVKHLQERTKML 243

Query: 243 NEQAAKATVESVVFVNKXXXXXXXXXXXXXXXXXXXXXXXGAIPDVEARVSGKDVLLRIH 302
            E+A K TVE+VVFV +                         +P++EARVS K+VL+R+H
Sbjct: 244 EEKAVKKTVEAVVFVKRTQYSADDDISSSDENFESSSDQ--PLPEIEARVSDKEVLIRVH 303

Query: 303 GKKCKGCLSNILNQIEKLNLTVLNSSALPFGNFRLDITIIAQMDDDFSMTVKELVQKLRQ 330
            +K KGCL+ IL++IE L+LT++NSS LPFGN  LDIT+IAQMD +FSMTVK+LV+ LRQ
Sbjct: 304 CEKTKGCLAKILSEIESLDLTIVNSSVLPFGNSTLDITVIAQMDAEFSMTVKDLVKNLRQ 361

[Close]

BLAST of CsaV3_6G044570 vs. TrEMBL
Match: tr|A0A2P4HTX5|A0A2P4HTX5_QUESU (Transcription factor bhlh25 OS=Quercus suber OX=58331 GN=CFP56_61799 PE=4 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 1.6e-52
Identity = 151/356 (42.42%), Postives = 193/356 (54.21%), Query Frame = 0


Query: 1   MEISSAKWLSEMELES-SFMNDLEMNPFECTLEELSSFQTFSDESYTSHVDL-------- 60
           ME SSAKW+SE+E+E  +F++  E+N F  +L+ L  F++FS ESY S+ DL        
Sbjct: 73  MESSSAKWISELEMEDPAFIHQYEINSFGYSLDNL-DFRSFSGESYPSNPDLNPKSTYNF 132

Query: 61  -----DNSSVQTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFGNIEMSPMVAQPS 120
                +N  +                                    F N    P ++Q  
Sbjct: 133 HASVIENPQIDLGRPAKQLKTKSWNSCATDHIPSKAASSSSSHLISFENSNSPPAISQQF 192

Query: 121 XXXXXXXXXXXXXXXSPNKNHGVGIKRSAAAAMNSNN-------------RSPLVAQDHV 180
                            N N    I  S+    N ++             R+PL AQDHV
Sbjct: 193 YGLDCTMRPKNEAVSDRNTNFPAMISESSFGMQNCSSKHGEVPKKVATMTRTPLHAQDHV 252

Query: 181 LAERKRREKLSQRFVALSALIPDLKKMDKASILGDAITYIKDLQERLKVANEQAAKATVE 240
           +AERKRREKLSQRF+ALSA++P LKKMDKAS+LGDAI Y+K LQER+K   EQAAK T+E
Sbjct: 253 IAERKRREKLSQRFIALSAVVPGLKKMDKASVLGDAIKYLKQLQERVKTLEEQAAKKTME 312

Query: 241 SVVFVNKXXXXXXXXXXXXXXXXXXXXXXXGAIPDVEARVSGKDVLLRIHGKKCKGCLSN 300
           SVVFV K          XXXXXX         +P +EARV  KDVL+RIH +  KG  + 
Sbjct: 313 SVVFVKKTRLSAADDTSXXXXXXDSESKE--QLPQIEARVLEKDVLIRIHCENRKGYAAK 372

Query: 301 ILNQIEKLNLTVLNSSALPFGNFRLDITIIAQMDDDFSMTVKELVQKLRQASLEFM 330
           IL +IEKL+L +LNSS LPFGN  LDIT++AQMD DF MTVK+L + LRQA L+ +
Sbjct: 373 ILGEIEKLDLAILNSSVLPFGNSTLDITVVAQMDVDFCMTVKDLARNLRQALLKLI 425

The following BLAST results are available for this feature:

BLAST of CsaV3_6G044570 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004143425.1	5.0e-127	100.00	PREDICTED: transcription factor bHLH18-like [Cucumis sativus] >KGN48660.1 hypoth...	[more]
XP_008440467.1	5.2e-116	83.28	PREDICTED: transcription factor bHLH18-like [Cucumis melo] >XP_016899206.1 PREDI...	[more]
XP_022132561.1	1.5e-91	60.86	transcription factor bHLH19-like isoform X2 [Momordica charantia]	[more]
XP_022950460.1	6.2e-85	65.04	transcription factor bHLH19-like [Cucurbita moschata]	[more]
XP_023543197.1	1.8e-84	64.69	transcription factor bHLH19-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsaV3_6G044570 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G22760.1	1.4e-38	46.73	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT4G37850.1	3.2e-35	33.13	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT2G22750.2	8.2e-31	55.15	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT2G22770.1	1.8e-30	49.76	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT2G46510.1	9.1e-14	60.71	ABA-inducible BHLH-type transcription factor	[more]

BLAST of CsaV3_6G044570 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q1PF16\|BH019_ARATH	2.5e-37	46.73	Transcription factor bHLH19 OS=Arabidopsis thaliana OX=3702 GN=BHLH19 PE=1 SV=1	[more]
sp\|Q9T072\|BH025_ARATH	5.8e-34	33.13	Transcription factor bHLH25 OS=Arabidopsis thaliana OX=3702 GN=BHLH25 PE=2 SV=2	[more]
sp\|Q1PF17\|BH018_ARATH	1.5e-29	55.15	Transcription factor bHLH18 OS=Arabidopsis thaliana OX=3702 GN=BHLH18 PE=1 SV=1	[more]
sp\|Q8S3F1\|BH020_ARATH	3.3e-29	49.76	Transcription factor NAI1 OS=Arabidopsis thaliana OX=3702 GN=NAI1 PE=2 SV=1	[more]
sp\|Q9ZPY8\|AIB_ARATH	1.6e-12	60.71	Transcription factor ABA-INDUCIBLE bHLH-TYPE OS=Arabidopsis thaliana OX=3702 GN=...	[more]

BLAST of CsaV3_6G044570 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KG27\|A0A0A0KG27_CUCSA	3.3e-127	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G497110 PE=4 SV=1	[more]
tr\|A0A1S4DT89\|A0A1S4DT89_CUCME	3.4e-116	83.28	transcription factor bHLH18-like OS=Cucumis melo OX=3656 GN=LOC103484896 PE=4 SV...	[more]
tr\|A0A2P6RPH5\|A0A2P6RPH5_ROSCH	3.5e-60	44.94	Putative transcription factor bHLH family OS=Rosa chinensis OX=74649 GN=RchiOBHm...	[more]
tr\|A0A251NTJ5\|A0A251NTJ5_PRUPE	2.6e-55	47.81	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_6G212000 PE=4 SV=1	[more]
tr\|A0A2P4HTX5\|A0A2P4HTX5_QUESU	1.6e-52	42.42	Transcription factor bhlh25 OS=Quercus suber OX=58331 GN=CFP56_61799 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0046872	metal ion binding
GO:0046983	protein dimerization activity

Vocabulary: **Biological Process**
Term	Definition
GO:0030001	metal ion transport

Vocabulary: **INTERPRO**
Term	Definition
IPR006121	HMA_dom
IPR036638	HLH_DNA-bd_sf
IPR011598	bHLH_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030001	metal ion transport
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0046983	protein dimerization activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_6G044570.1	CsaV3_6G044570.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 193..213
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 228..245
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 228..247
None	No IPR available	PANTHER	PTHR23042:SF100	SUBFAMILY NOT NAMED	coord: 37..328
None	No IPR available	PANTHER	PTHR23042	CIRCADIAN PROTEIN CLOCK/ARNT/BMAL/PAS	coord: 37..328
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SMART	SM00353	finulus	coord: 153..202 e-value: 2.3E-15 score: 67.0
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 152..197 e-value: 1.9E-11 score: 43.7
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 147..196 score: 15.408
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	CDD	cd00083	HLH	coord: 152..201 e-value: 1.55485E-14 score: 66.0835
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	G3DSA:4.10.280.10		coord: 141..211 e-value: 3.7E-15 score: 57.7
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	SSF47459	HLH, helix-loop-helix DNA-binding domain	coord: 152..208
IPR006121	Heavy metal-associated domain, HMA	PROSITE	PS50846	HMA_2	coord: 257..329 score: 9.278

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_6G044570	Cucurbita maxima (Rimu)	cmacucB0809
CsaV3_6G044570	Cucurbita maxima (Rimu)	cmacucB0955
CsaV3_6G044570	Cucurbita maxima (Rimu)	cmacucB1035
CsaV3_6G044570	Cucurbita moschata (Rifu)	cmocucB0029
CsaV3_6G044570	Cucurbita moschata (Rifu)	cmocucB0793
CsaV3_6G044570	Cucurbita moschata (Rifu)	cmocucB0942
CsaV3_6G044570	Cucurbita moschata (Rifu)	cmocucB1019
CsaV3_6G044570	Cucurbita pepo (Zucchini)	cpecucB0092
CsaV3_6G044570	Cucurbita pepo (Zucchini)	cpecucB0137
CsaV3_6G044570	Cucurbita pepo (Zucchini)	cpecucB0618
CsaV3_6G044570	Cucurbita pepo (Zucchini)	cpecucB0985
CsaV3_6G044570	Wild cucumber (PI 183967)	cpicucB112
CsaV3_6G044570	Wild cucumber (PI 183967)	cpicucB187
CsaV3_6G044570	Wild cucumber (PI 183967)	cpicucB363
CsaV3_6G044570	Bottle gourd (USVL1VR-Ls)	cuclsiB462
CsaV3_6G044570	Bottle gourd (USVL1VR-Ls)	cuclsiB485
CsaV3_6G044570	Bottle gourd (USVL1VR-Ls)	cuclsiB514
CsaV3_6G044570	Melon (DHL92) v3.5.1	cucmeB482
CsaV3_6G044570	Melon (DHL92) v3.5.1	cucmeB494
CsaV3_6G044570	Melon (DHL92) v3.5.1	cucmeB517
CsaV3_6G044570	Melon (DHL92) v3.6.1	cucmedB471
CsaV3_6G044570	Melon (DHL92) v3.6.1	cucmedB482
CsaV3_6G044570	Melon (DHL92) v3.6.1	cucmedB505
CsaV3_6G044570	Watermelon (Charleston Gray)	cucwcgB453
CsaV3_6G044570	Watermelon (Charleston Gray)	cucwcgB455
CsaV3_6G044570	Watermelon (Charleston Gray)	cucwcgB531
CsaV3_6G044570	Watermelon (97103) v1	cucwmB498
CsaV3_6G044570	Watermelon (97103) v1	cucwmB526
CsaV3_6G044570	Watermelon (97103) v1	cucwmB560
CsaV3_6G044570	Watermelon (97103) v2	cucwmbB430
CsaV3_6G044570	Watermelon (97103) v2	cucwmbB521
CsaV3_6G044570	Wax gourd	cucwgoB642
CsaV3_6G044570	Cucumber (Chinese Long) v3	cuccucB091
CsaV3_6G044570	Cucumber (Chinese Long) v3	cuccucB149
CsaV3_6G044570	Silver-seed gourd	carcucB0003
CsaV3_6G044570	Silver-seed gourd	carcucB0069
CsaV3_6G044570	Silver-seed gourd	carcucB0442
CsaV3_6G044570	Cucumber (Gy14) v2	cgybcucB088
CsaV3_6G044570	Cucumber (Gy14) v2	cgybcucB298
CsaV3_6G044570	Cucumber (Gy14) v1	cgycucB126
CsaV3_6G044570	Cucumber (Gy14) v1	cgycucB256