CsaV3_6G043960 (gene) Cucumber (Chinese Long) v3

NameCsaV3_6G043960
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr6 : 25942792 .. 25942949 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
GGCTTCATTCTGGACAGTCCTTTCAAGCAAGGAGATGGGCTGTATGGTTTGGGCGTAAGCCCAGAAGGCACAGCCTTTAAAGCGGAGGGGAATGCGTCAGGCTGGCTCACAGAGCAACGACAACCTCCCGCTCTTTGCGGTGAATGGAAATCTGACCG

mRNA sequence

GGCTTCATTCTGGACAGTCCTTTCAAGCAAGGAGATGGGCTGTATGGTTTGGGCGTAAGCCCAGAAGGCACAGCCTTTAAAGCGGAGGGGAATGCGTCAGGCTGGCTCACAGAGCAACGACAACCTCCCGCTCTTTGCGGTGAATGGAAATCTGACCG

Coding sequence (CDS)

GGCTTCATTCTGGACAGTCCTTTCAAGCAAGGAGATGGGCTGTATGGTTTGGGCGTAAGCCCAGAAGGCACAGCCTTTAAAGCGGAGGGGAATGCGTCAGGCTGGCTCACAGAGCAACGACAACCTCCCGCTCTTTGCGGTGAATGGAAATCTGACCG

Protein sequence

GFILDSPFKQGDGLYGLGVSPEGTAFKAEGNASGWLTEQRQPPALCGEWKSDX
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_6G043960.1CsaV3_6G043960.1mRNA


Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 29..53

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_6G043960Watermelon (97103) v2cucwmbB430
CsaV3_6G043960Watermelon (97103) v2cucwmbB512
CsaV3_6G043960Wax gourdcucwgoB596
CsaV3_6G043960Wax gourdcucwgoB642
CsaV3_6G043960Cucumber (Chinese Long) v3cuccucB090
CsaV3_6G043960Cucumber (Chinese Long) v3cuccucB097
CsaV3_6G043960Cucumber (Chinese Long) v3cuccucB178
CsaV3_6G043960Silver-seed gourdcarcucB0003
CsaV3_6G043960Silver-seed gourdcarcucB0353
CsaV3_6G043960Silver-seed gourdcarcucB0442
CsaV3_6G043960Cucumber (Gy14) v2cgybcucB087
CsaV3_6G043960Cucumber (Gy14) v2cgybcucB193
CsaV3_6G043960Cucumber (Gy14) v2cgybcucB188
CsaV3_6G043960Cucumber (Gy14) v2cgybcucB298
CsaV3_6G043960Cucumber (Gy14) v1cgycucB126
CsaV3_6G043960Cucumber (Gy14) v1cgycucB600
CsaV3_6G043960Cucurbita maxima (Rimu)cmacucB0041
CsaV3_6G043960Cucurbita maxima (Rimu)cmacucB0221
CsaV3_6G043960Cucurbita maxima (Rimu)cmacucB0413
CsaV3_6G043960Cucurbita maxima (Rimu)cmacucB0671
CsaV3_6G043960Cucurbita maxima (Rimu)cmacucB0748
CsaV3_6G043960Cucurbita maxima (Rimu)cmacucB0809
CsaV3_6G043960Cucurbita maxima (Rimu)cmacucB0914
CsaV3_6G043960Cucurbita maxima (Rimu)cmacucB1035
CsaV3_6G043960Cucurbita moschata (Rifu)cmocucB0026
CsaV3_6G043960Cucurbita moschata (Rifu)cmocucB0211
CsaV3_6G043960Cucurbita moschata (Rifu)cmocucB0408
CsaV3_6G043960Cucurbita moschata (Rifu)cmocucB0737
CsaV3_6G043960Cucurbita moschata (Rifu)cmocucB0793
CsaV3_6G043960Cucurbita moschata (Rifu)cmocucB0905
CsaV3_6G043960Cucurbita moschata (Rifu)cmocucB1019
CsaV3_6G043960Cucurbita pepo (Zucchini)cpecucB0092
CsaV3_6G043960Cucurbita pepo (Zucchini)cpecucB0283
CsaV3_6G043960Cucurbita pepo (Zucchini)cpecucB0364
CsaV3_6G043960Cucurbita pepo (Zucchini)cpecucB0576
CsaV3_6G043960Cucurbita pepo (Zucchini)cpecucB0618
CsaV3_6G043960Cucurbita pepo (Zucchini)cpecucB0943
CsaV3_6G043960Cucurbita pepo (Zucchini)cpecucB1033
CsaV3_6G043960Wild cucumber (PI 183967)cpicucB110
CsaV3_6G043960Wild cucumber (PI 183967)cpicucB111
CsaV3_6G043960Wild cucumber (PI 183967)cpicucB239
CsaV3_6G043960Wild cucumber (PI 183967)cpicucB363
CsaV3_6G043960Bottle gourd (USVL1VR-Ls)cuclsiB462
CsaV3_6G043960Bottle gourd (USVL1VR-Ls)cuclsiB504
CsaV3_6G043960Melon (DHL92) v3.5.1cucmeB481
CsaV3_6G043960Melon (DHL92) v3.5.1cucmeB516
CsaV3_6G043960Melon (DHL92) v3.5.1cucmeB517
CsaV3_6G043960Melon (DHL92) v3.6.1cucmedB470
CsaV3_6G043960Melon (DHL92) v3.6.1cucmedB503
CsaV3_6G043960Melon (DHL92) v3.6.1cucmedB504
CsaV3_6G043960Melon (DHL92) v3.6.1cucmedB505
CsaV3_6G043960Watermelon (Charleston Gray)cucwcgB450
CsaV3_6G043960Watermelon (Charleston Gray)cucwcgB455
CsaV3_6G043960Watermelon (Charleston Gray)cucwcgB521
CsaV3_6G043960Watermelon (97103) v1cucwmB486
CsaV3_6G043960Watermelon (97103) v1cucwmB526