CsaV3_6G039240 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATTATGCAGGAGCACAAACTTTTCCAAATTCCACATTTGGATGGACTAATGTCAAAGATGTTGTTAATGCACACATTAGAATTCGAGCTTATGAGGTTCCATCAACCAATGGAAGATACTGTCTAGTTGAAAGTGTTATCACTATTCAAGAATTGTCAAGTTATTGCATGATCTCTACCCTTCTCTTCAACTTCCTGACAAGTAAGTCTTACTCGACCATCCCGATCTCCATAAGCATTTTCAAGAAAACGCTACTTTCTCGACAACGATCTTTTAAAATTATATAAGCCCTCCTTCCATGTCAATGTTTCTTGATCTTATTAAATTTGTAAACTTCATTTATTTATAGCTTCCTTCGCCTTGGTTTTGATTCCTATGATAGCATTTATTCTTAAGTTTCTTTACAGAAAGAATCAATCGTACATTATCGGCAGACCCAACAATGTCACAACAGTAGGTTCACAACTAATTTGGTTATTCACAATAGTTAGAGAAGGCATACAGTACTTTCATGGATGCTTTAAAAACTGTATGAATGTTGTCAACCGTTTCTTCTTGCATAAAAAAGCATCAATAATCGCTCAGTTGTTTATAAGTCCATTGTGGGTTGTTTTTATAAACTTAGGAAAACGTTTTGGAAATTATAAACCTTCAATCTACAATTATCTTGCACAAACAATTCCATAGGTAAATTCATGATTATATTTCAACTATAAACTCCATGTATCGATTCTTGATTTCAAGCTAATCAGTATAATATTTTCAACTGCAGGTGTGGCCGATGACAAACCGTTTACACCCGTGTATCAGGTGTCAGTCGAGAAAGCAAAGAACTTAGGCATTCAATTCATTCCCCTTGCAGAAAACCTGAAGGAAACTGTTGAGAGCTTGAAGGAAAAGAATTTTATCAACTTCTAA ATGGATTATGCAGGAGCACAAACTTTTCCAAATTCCACATTTGGATGGACTAATGTCAAAGATGTTGTTAATGCACACATTAGAATTCGAGCTTATGAGGTTCCATCAACCAATGGAAGATACTGTCTAGTTGAAAGTGTTATCACTATTCAAGAATTGTCAAGTTATTGCATGATCTCTACCCTTCTCTTCAACTTCCTGACAACTTCCTTCGCCTTGGTTTTGATTCCTATGATAGCATTTATTCTTAAGTTTCTTTACAGAAAGAATCAATCGTACATTATCGGCAGACCCAACAATGTCACAACAGTAGGTGTGGCCGATGACAAACCGTTTACACCCGTGTATCAGGTGTCAGTCGAGAAAGCAAAGAACTTAGGCATTCAATTCATTCCCCTTGCAGAAAACCTGAAGGAAACTGTTGAGAGCTTGAAGGAAAAGAATTTTATCAACTTCTAA ATGGATTATGCAGGAGCACAAACTTTTCCAAATTCCACATTTGGATGGACTAATGTCAAAGATGTTGTTAATGCACACATTAGAATTCGAGCTTATGAGGTTCCATCAACCAATGGAAGATACTGTCTAGTTGAAAGTGTTATCACTATTCAAGAATTGTCAAGTTATTGCATGATCTCTACCCTTCTCTTCAACTTCCTGACAACTTCCTTCGCCTTGGTTTTGATTCCTATGATAGCATTTATTCTTAAGTTTCTTTACAGAAAGAATCAATCGTACATTATCGGCAGACCCAACAATGTCACAACAGTAGGTGTGGCCGATGACAAACCGTTTACACCCGTGTATCAGGTGTCAGTCGAGAAAGCAAAGAACTTAGGCATTCAATTCATTCCCCTTGCAGAAAACCTGAAGGAAACTGTTGAGAGCTTGAAGGAAAAGAATTTTATCAACTTCTAA MDYAGAQTFPNSTFGWTNVKDVVNAHIRIRAYEVPSTNGRYCLVESVITIQELSSYCMISTLLFNFLTTSFALVLIPMIAFILKFLYRKNQSYIIGRPNNVTTVGVADDKPFTPVYQVSVEKAKNLGIQFIPLAENLKETVESLKEKNFINF
BLAST of CsaV3_6G039240 vs. NCBI nr
Match: XP_011657635.1 (PREDICTED: cinnamoyl-CoA reductase 1-like [Cucumis sativus]) HSP 1 Score: 146.0 bits (367), Expect = 1.1e-31 Identity = 90/149 (60.40%), Postives = 94/149 (63.09%), Query Frame = 0
BLAST of CsaV3_6G039240 vs. NCBI nr
Match: XP_008449699.1 (PREDICTED: cinnamoyl-CoA reductase 1-like isoform X1 [Cucumis melo] >XP_016900780.1 PREDICTED: cinnamoyl-CoA reductase 1-like isoform X1 [Cucumis melo]) HSP 1 Score: 146.0 bits (367), Expect = 1.1e-31 Identity = 88/149 (59.06%), Postives = 91/149 (61.07%), Query Frame = 0
BLAST of CsaV3_6G039240 vs. NCBI nr
Match: XP_016900781.1 (PREDICTED: uncharacterized protein LOC103491499 isoform X2 [Cucumis melo]) HSP 1 Score: 146.0 bits (367), Expect = 1.1e-31 Identity = 88/149 (59.06%), Postives = 91/149 (61.07%), Query Frame = 0
BLAST of CsaV3_6G039240 vs. NCBI nr
Match: XP_022153022.1 (cinnamoyl-CoA reductase 1-like [Momordica charantia]) HSP 1 Score: 129.8 bits (325), Expect = 7.9e-27 Identity = 76/149 (51.01%), Postives = 88/149 (59.06%), Query Frame = 0
BLAST of CsaV3_6G039240 vs. NCBI nr
Match: XP_023533587.1 (cinnamoyl-CoA reductase 1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 126.7 bits (317), Expect = 6.7e-26 Identity = 78/149 (52.35%), Postives = 86/149 (57.72%), Query Frame = 0
BLAST of CsaV3_6G039240 vs. TAIR10
Match: AT5G19440.1 (NAD(P)-binding Rossmann-fold superfamily protein) HSP 1 Score: 111.7 bits (278), Expect = 4.0e-25 Identity = 66/148 (44.59%), Postives = 80/148 (54.05%), Query Frame = 0
BLAST of CsaV3_6G039240 vs. TAIR10
Match: AT1G51410.1 (NAD(P)-binding Rossmann-fold superfamily protein) HSP 1 Score: 106.3 bits (264), Expect = 1.7e-23 Identity = 63/148 (42.57%), Postives = 81/148 (54.73%), Query Frame = 0
BLAST of CsaV3_6G039240 vs. TAIR10
Match: AT1G09510.1 (NAD(P)-binding Rossmann-fold superfamily protein) HSP 1 Score: 54.7 bits (130), Expect = 5.9e-08 Identity = 43/143 (30.07%), Postives = 60/143 (41.96%), Query Frame = 0
BLAST of CsaV3_6G039240 vs. TAIR10
Match: AT1G66800.1 (NAD(P)-binding Rossmann-fold superfamily protein) HSP 1 Score: 52.8 bits (125), Expect = 2.2e-07 Identity = 44/134 (32.84%), Postives = 67/134 (50.00%), Query Frame = 0
BLAST of CsaV3_6G039240 vs. TAIR10
Match: AT1G80820.1 (cinnamoyl coa reductase) HSP 1 Score: 51.2 bits (121), Expect = 6.5e-07 Identity = 38/146 (26.03%), Postives = 66/146 (45.21%), Query Frame = 0
BLAST of CsaV3_6G039240 vs. Swiss-Prot
Match: sp|Q9SAH9|CCR2_ARATH (Cinnamoyl-CoA reductase 2 OS=Arabidopsis thaliana OX=3702 GN=CCR2 PE=1 SV=1) HSP 1 Score: 51.2 bits (121), Expect = 1.2e-05 Identity = 38/146 (26.03%), Postives = 66/146 (45.21%), Query Frame = 0
BLAST of CsaV3_6G039240 vs. Swiss-Prot
Match: sp|Q6K9A2|CCR1_ORYSJ (Cinnamoyl-CoA reductase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=CCR1 PE=1 SV=1) HSP 1 Score: 48.9 bits (115), Expect = 5.8e-05 Identity = 36/145 (24.83%), Postives = 63/145 (43.45%), Query Frame = 0
BLAST of CsaV3_6G039240 vs. TrEMBL
Match: tr|A0A1S3BNJ9|A0A1S3BNJ9_CUCME (cinnamoyl-CoA reductase 1-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103491499 PE=4 SV=1) HSP 1 Score: 146.0 bits (367), Expect = 7.1e-32 Identity = 88/149 (59.06%), Postives = 91/149 (61.07%), Query Frame = 0
BLAST of CsaV3_6G039240 vs. TrEMBL
Match: tr|A0A1S4DXS2|A0A1S4DXS2_CUCME (uncharacterized protein LOC103491499 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103491499 PE=4 SV=1) HSP 1 Score: 146.0 bits (367), Expect = 7.1e-32 Identity = 88/149 (59.06%), Postives = 91/149 (61.07%), Query Frame = 0
BLAST of CsaV3_6G039240 vs. TrEMBL
Match: tr|M5WHN5|M5WHN5_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_4G253700 PE=4 SV=1) HSP 1 Score: 126.3 bits (316), Expect = 5.8e-26 Identity = 73/148 (49.32%), Postives = 85/148 (57.43%), Query Frame = 0
BLAST of CsaV3_6G039240 vs. TrEMBL
Match: tr|A0A1S3TJK1|A0A1S3TJK1_VIGRR (cinnamoyl-CoA reductase 1-like OS=Vigna radiata var. radiata OX=3916 GN=LOC106756173 PE=4 SV=1) HSP 1 Score: 123.2 bits (308), Expect = 4.9e-25 Identity = 73/148 (49.32%), Postives = 85/148 (57.43%), Query Frame = 0
BLAST of CsaV3_6G039240 vs. TrEMBL
Match: tr|A0A1R3KTB3|A0A1R3KTB3_9ROSI (NAD-dependent epimerase/dehydratase OS=Corchorus olitorius OX=93759 GN=COLO4_04651 PE=4 SV=1) HSP 1 Score: 123.2 bits (308), Expect = 4.9e-25 Identity = 73/148 (49.32%), Postives = 85/148 (57.43%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |