CsaV3_6G039000 (gene) Cucumber (Chinese Long) v3

NameCsaV3_6G039000
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr6 : 22361170 .. 22361506 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTACAACAACTACAAGCCTCATTGAGAGAGAAGAAGGCCTGAGAATGCAGATATTGAGTGCTTTGAGATTATTAGTTGAACCAACCAAGGTAGATTGCAAGACAAGAATTTTCAGGTGATATTTAGATCTTTGGTGATGGAGAAGTTGGTCTCGTTGGTGAGCAGAAATGTATATTGACCATTCGCTGCGAAGGAAAGACTTTCTTTGGAATTATTCTAAATTCCAGAAAAATTGGCCTAAAATCTTTTAACTTTTTTAGGATCCAGAAGGCTGCAGCCGAGCAAGGCCAAACACAGTCTTCGGAGTTGGTTTGCACGGAAGATCGACGTTAA

mRNA sequence

ATGGCTACAACAACTACAAGCCTCATTGAGAGAGAAGAAGGCCTGAGAATGCAGATATTGAGTGCTTTGAGATTATTAGTTGAACCAACCAAGGTAGATTGCAAGACAAGAATTTTCAGGATCCAGAAGGCTGCAGCCGAGCAAGGCCAAACACAGTCTTCGGAGTTGGTTTGCACGGAAGATCGACGTTAA

Coding sequence (CDS)

ATGGCTACAACAACTACAAGCCTCATTGAGAGAGAAGAAGGCCTGAGAATGCAGATATTGAGTGCTTTGAGATTATTAGTTGAACCAACCAAGGTAGATTGCAAGACAAGAATTTTCAGGATCCAGAAGGCTGCAGCCGAGCAAGGCCAAACACAGTCTTCGGAGTTGGTTTGCACGGAAGATCGACGTTAA

Protein sequence

MATTTTSLIEREEGLRMQILSALRLLVEPTKVDCKTRIFRIQKAAAEQGQTQSSELVCTEDRR
BLAST of CsaV3_6G039000 vs. NCBI nr
Match: KGN48100.1 (hypothetical protein Csa_6G431750 [Cucumis sativus])

HSP 1 Score: 120.2 bits (300), Expect = 2.6e-24
Identity = 63/63 (100.00%), Postives = 63/63 (100.00%), Query Frame = 0

Query: 1  MATTTTSLIEREEGLRMQILSALRLLVEPTKVDCKTRIFRIQKAAAEQGQTQSSELVCTE 60
          MATTTTSLIEREEGLRMQILSALRLLVEPTKVDCKTRIFRIQKAAAEQGQTQSSELVCTE
Sbjct: 1  MATTTTSLIEREEGLRMQILSALRLLVEPTKVDCKTRIFRIQKAAAEQGQTQSSELVCTE 60

Query: 61 DRR 64
          DRR
Sbjct: 61 DRR 63

BLAST of CsaV3_6G039000 vs. TrEMBL
Match: tr|A0A0A0KEJ5|A0A0A0KEJ5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G431750 PE=4 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 1.7e-24
Identity = 63/63 (100.00%), Postives = 63/63 (100.00%), Query Frame = 0

Query: 1  MATTTTSLIEREEGLRMQILSALRLLVEPTKVDCKTRIFRIQKAAAEQGQTQSSELVCTE 60
          MATTTTSLIEREEGLRMQILSALRLLVEPTKVDCKTRIFRIQKAAAEQGQTQSSELVCTE
Sbjct: 1  MATTTTSLIEREEGLRMQILSALRLLVEPTKVDCKTRIFRIQKAAAEQGQTQSSELVCTE 60

Query: 61 DRR 64
          DRR
Sbjct: 61 DRR 63

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KGN48100.12.6e-24100.00hypothetical protein Csa_6G431750 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A0A0KEJ5|A0A0A0KEJ5_CUCSA1.7e-24100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G431750 PE=4 SV=1[more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_6G039000.1CsaV3_6G039000.1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None