CsaV3_6G038280 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_6G038280
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	Glutamate-1-semialdehyde 2,1-aminomutase
Location	chr6 : 21791781 .. 21792563 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTTCAATAGGCAGTGGTGGTGGTAGTAGTGTTCAAGCATCGCCGCCACCATCATCACCACTACCAGCCACTGAACCAAATTCAAGTCCTAGGATATCTTTCTCTTCTGAGTTTCTTGATGAAAGCAACTTCATTTCCATCACTCCAAATTCCCAGATAGAGAGAGATCAAGAGATTTGTGAGAGACAGAAGAAGGATAGATCAGAGAAGCTGGCATGGAGTGCTGATTTTGAGTTTCTTTCTAATAAAGTTAGTAGCCACTCCATGATTACAGCTGATGAGCTTTTCTTTGAAGGGAAGCTTCTTCCTTTTTGGCAAATGCAACAAGCAGAGCGGCTTAACAAAATCAGTCTGAAATCTCCTAAAGATGTGGATGAAGAAGATTTGGTGGAGATAGAGGTAAACAAGGAAGCAGAGAACAAAGTGAATTGGTTTCTCGACGACGACCCGTCTCCAAGACCACCAAAATGCACTGTTCTCTGGAAAGAACTATTGAGGTTGAAGAAGCAGCGTGCTTCATCTGCACTATCGCCATCTTCTTCTTCGTCCTCGTCGTCTTCCTCTTCCAGGTCCATGGCTGATGCAGCCACAACAGAGGAAGGAAAGGAAGGGACAACAGGAAACAAAGAGAAGAACGTAAAGAGGATAAAGAAGTTGGAAAGGACAAGATCAGCCAGTATAAGAATAAGGCCTATGATTAATGTGCCAATCTGCACACAGGTGAAGAGCAGTGTTTTGCCACCCTTGTTCCCACTTAAGAAAGGAAGATTTGATAGATGA

mRNA sequence

ATGGTTTCAATAGGCAGTGGTGGTGGTAGTAGTGTTCAAGCATCGCCGCCACCATCATCACCACTACCAGCCACTGAACCAAATTCAAGTCCTAGGATATCTTTCTCTTCTGAGTTTCTTGATGAAAGCAACTTCATTTCCATCACTCCAAATTCCCAGATAGAGAGAGATCAAGAGATTTGTGAGAGACAGAAGAAGGATAGATCAGAGAAGCTGGCATGGAGTGCTGATTTTGAGTTTCTTTCTAATAAAGTTAGTAGCCACTCCATGATTACAGCTGATGAGCTTTTCTTTGAAGGGAAGCTTCTTCCTTTTTGGCAAATGCAACAAGCAGAGCGGCTTAACAAAATCAGTCTGAAATCTCCTAAAGATGTGGATGAAGAAGATTTGGTGGAGATAGAGGTAAACAAGGAAGCAGAGAACAAAGTGAATTGGTTTCTCGACGACGACCCGTCTCCAAGACCACCAAAATGCACTGTTCTCTGGAAAGAACTATTGAGGTTGAAGAAGCAGCGTGCTTCATCTGCACTATCGCCATCTTCTTCTTCGTCCTCGTCGTCTTCCTCTTCCAGGTCCATGGCTGATGCAGCCACAACAGAGGAAGGAAAGGAAGGGACAACAGGAAACAAAGAGAAGAACGTAAAGAGGATAAAGAAGTTGGAAAGGACAAGATCAGCCAGTATAAGAATAAGGCCTATGATTAATGTGCCAATCTGCACACAGGTGAAGAGCAGTGTTTTGCCACCCTTGTTCCCACTTAAGAAAGGAAGATTTGATAGATGA

Coding sequence (CDS)

ATGGTTTCAATAGGCAGTGGTGGTGGTAGTAGTGTTCAAGCATCGCCGCCACCATCATCACCACTACCAGCCACTGAACCAAATTCAAGTCCTAGGATATCTTTCTCTTCTGAGTTTCTTGATGAAAGCAACTTCATTTCCATCACTCCAAATTCCCAGATAGAGAGAGATCAAGAGATTTGTGAGAGACAGAAGAAGGATAGATCAGAGAAGCTGGCATGGAGTGCTGATTTTGAGTTTCTTTCTAATAAAGTTAGTAGCCACTCCATGATTACAGCTGATGAGCTTTTCTTTGAAGGGAAGCTTCTTCCTTTTTGGCAAATGCAACAAGCAGAGCGGCTTAACAAAATCAGTCTGAAATCTCCTAAAGATGTGGATGAAGAAGATTTGGTGGAGATAGAGGTAAACAAGGAAGCAGAGAACAAAGTGAATTGGTTTCTCGACGACGACCCGTCTCCAAGACCACCAAAATGCACTGTTCTCTGGAAAGAACTATTGAGGTTGAAGAAGCAGCGTGCTTCATCTGCACTATCGCCATCTTCTTCTTCGTCCTCGTCGTCTTCCTCTTCCAGGTCCATGGCTGATGCAGCCACAACAGAGGAAGGAAAGGAAGGGACAACAGGAAACAAAGAGAAGAACGTAAAGAGGATAAAGAAGTTGGAAAGGACAAGATCAGCCAGTATAAGAATAAGGCCTATGATTAATGTGCCAATCTGCACACAGGTGAAGAGCAGTGTTTTGCCACCCTTGTTCCCACTTAAGAAAGGAAGATTTGATAGATGA

Protein sequence

MVSIGSGGGSSVQASPPPSSPLPATEPNSSPRISFSSEFLDESNFISITPNSQIERDQEICERQKKDRSEKLAWSADFEFLSNKVSSHSMITADELFFEGKLLPFWQMQQAERLNKISLKSPKDVDEEDLVEIEVNKEAENKVNWFLDDDPSPRPPKCTVLWKELLRLKKQRASSALSPSSSSSSSSSSSRSMADAATTEEGKEGTTGNKEKNVKRIKKLERTRSASIRIRPMINVPICTQVKSSVLPPLFPLKKGRFDR

Homology

[Close]

BLAST of CsaV3_6G038280 vs. NCBI nr
Match: XP_004140154.1 (PREDICTED: uncharacterized protein LOC101216953 [Cucumis sativus])

HSP 1 Score: 388.3 bits (996), Expect = 2.1e-104
Identity = 260/260 (100.00%), Postives = 260/260 (100.00%), Query Frame = 0


Query: 1   MVSIGSGGGSSVQASPPPSSPLPATEPNSSPRISFSSEFLDESNFISITPNSQIERDQEI 60
           MVSIGSGGGSSVQASPPPSSPLPATEPNSSPRISFSSEFLDESNFISITPNSQIERDQEI
Sbjct: 1   MVSIGSGGGSSVQASPPPSSPLPATEPNSSPRISFSSEFLDESNFISITPNSQIERDQEI 60

Query: 61  CERQKKDRSEKLAWSADFEFLSNKVSSHSMITADELFFEGKLLPFWQMQQAERLNKISLK 120
           CERQKKDRSEKLAWSADFEFLSNKVSSHSMITADELFFEGKLLPFWQMQQAERLNKISLK
Sbjct: 61  CERQKKDRSEKLAWSADFEFLSNKVSSHSMITADELFFEGKLLPFWQMQQAERLNKISLK 120

Query: 121 SPKDVDEEDLVEIEVNKEAENKVNWFLDDDPSPRPPKCTVLWKELLRLKKQXXXXXXXXX 180
           SPKDVDEEDLVEIEVNKEAENKVNWFLDDDPSPRPPKCTVLWKELLRLKKQXXXXXXXXX
Sbjct: 121 SPKDVDEEDLVEIEVNKEAENKVNWFLDDDPSPRPPKCTVLWKELLRLKKQXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSASIRIRPMINVPICT 240
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSASIRIRPMINVPICT
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSASIRIRPMINVPICT 240

Query: 241 QVKSSVLPPLFPLKKGRFDR 261
           QVKSSVLPPLFPLKKGRFDR
Sbjct: 241 QVKSSVLPPLFPLKKGRFDR 260

[Close]

BLAST of CsaV3_6G038280 vs. NCBI nr
Match: XP_008449565.1 (PREDICTED: uncharacterized protein LOC103491410 [Cucumis melo])

HSP 1 Score: 340.5 bits (872), Expect = 5.0e-90
Identity = 239/260 (91.92%), Postives = 239/260 (91.92%), Query Frame = 0


Query: 1   MVSIGSGGGSSVQASPPPSSPLPATEPNSSPRISFSSEFLDESNFISITPNSQIERDQEI 60
           MVSIG GGG                   SSPRISFSSEFLDESNFISITPNSQIERDQEI
Sbjct: 1   MVSIGIGGGXXXXXXXXXXXXXXXXXXXSSPRISFSSEFLDESNFISITPNSQIERDQEI 60

Query: 61  CERQKKDRSEKLAWSADFEFLSNKVSSHSMITADELFFEGKLLPFWQMQQAERLNKISLK 120
           CERQKKDRSEKLAWSADFEFLSNKVSSHSMITADELFFEGKLLPFWQMQQAERLNKISLK
Sbjct: 61  CERQKKDRSEKLAWSADFEFLSNKVSSHSMITADELFFEGKLLPFWQMQQAERLNKISLK 120

Query: 121 SPKDVDEEDLVEIEVNKEAENKVNWFLDDDPSPRPPKCTVLWKELLRLKKQXXXXXXXXX 180
           SPKDVDEEDLVEIEVNKEAENKVNWFLDDDPSPRPPKCTVLWKELLRLKKQXXXXXXXXX
Sbjct: 121 SPKDVDEEDLVEIEVNKEAENKVNWFLDDDPSPRPPKCTVLWKELLRLKKQXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSASIRIRPMINVPICT 240
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX RSASIRIRPMINVPICT
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRSASIRIRPMINVPICT 240

Query: 241 QVKSSVLPPLFPLKKGRFDR 261
           QVKSSVLPPLFPLKKGRFDR
Sbjct: 241 QVKSSVLPPLFPLKKGRFDR 260

[Close]

BLAST of CsaV3_6G038280 vs. NCBI nr
Match: XP_022930387.1 (uncharacterized protein LOC111436849 [Cucurbita moschata] >XP_023000022.1 uncharacterized protein LOC111494331 [Cucurbita maxima] >XP_023513461.1 uncharacterized protein LOC111778063 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 332.0 bits (850), Expect = 1.8e-87
Identity = 222/260 (85.38%), Postives = 227/260 (87.31%), Query Frame = 0


Query: 1   MVSIGSGGGSSVQASPPPSSPLPATEPNSSPRISFSSEFLDESNFISITPNSQIERDQEI 60
           MVSI      SVQ SPP SS     EPNSSPRISFSSEFLDESNFISITP+SQIERDQEI
Sbjct: 1   MVSI-----DSVQTSPPSSS----IEPNSSPRISFSSEFLDESNFISITPHSQIERDQEI 60

Query: 61  CERQKKDRSEKLAWSADFEFLSNKVSSHSMITADELFFEGKLLPFWQMQQAERLNKISLK 120
           CERQKK+RSE+LA SADFEFLSN+VSSHSM+TADELFFEGKLLPFWQMQQAERLNKISLK
Sbjct: 61  CERQKKERSERLARSADFEFLSNQVSSHSMLTADELFFEGKLLPFWQMQQAERLNKISLK 120

Query: 121 SPKDVDEEDLVEIEVNKEAENKVNWFLDDDPSPRPPKCTVLWKELLRLKKQXXXXXXXXX 180
           SPKDVDEEDLVEIEVNKEAENKVNWFLDDDPSPRPPKCTVLWKELLRLKK  XXXXXXXX
Sbjct: 121 SPKDVDEEDLVEIEVNKEAENKVNWFLDDDPSPRPPKCTVLWKELLRLKK--XXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSASIRIRPMINVPICT 240
           XXXXXXXXXXXXXXXXXXXXXXXXXX                 RSASIRIRPMINVPICT
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXGNKEKNIKRIKKGLERTRSASIRIRPMINVPICT 240

Query: 241 QVKSSVLPPLFPLKKGRFDR 261
           QVKSSVLPPLFPLKKGRFDR
Sbjct: 241 QVKSSVLPPLFPLKKGRFDR 249

[Close]

BLAST of CsaV3_6G038280 vs. NCBI nr
Match: XP_022138704.1 (uncharacterized protein LOC111009802 [Momordica charantia])

HSP 1 Score: 318.5 bits (815), Expect = 2.0e-83
Identity = 223/261 (85.44%), Postives = 227/261 (86.97%), Query Frame = 0


Query: 1   MVSIGSGGGSSVQASPPPSSPLPATEPNSSPRISFSSEFLDESNFISITPNSQIERDQEI 60
           MVSIG     +                   PRISFSSEFLDESNFISITPNSQIERDQE+
Sbjct: 1   MVSIGRSSVQATXXXXXXXXXXXXXXXXXXPRISFSSEFLDESNFISITPNSQIERDQEV 60

Query: 61  CERQKKDRSEKLAWSADFEFLSNKVSSHSMITADELFFEGKLLPFWQMQQAERLNKISLK 120
           CERQ+K+RSEKLAWSADFEFLSNKVSSHSM TADELFFEGKLLPFWQMQQAERL KISLK
Sbjct: 61  CERQRKERSEKLAWSADFEFLSNKVSSHSMTTADELFFEGKLLPFWQMQQAERLGKISLK 120

Query: 121 SPKDVDEEDLVEIEVNKEAENKVNWFLDDDPSPRPPKCTVLWKELLRLKKQ-XXXXXXXX 180
           SPKDVDEEDLVEIEVNKEAENKVNWFLDDDPSPRPPKCTVLWKELLRLKKQ   XXXXXX
Sbjct: 121 SPKDVDEEDLVEIEVNKEAENKVNWFLDDDPSPRPPKCTVLWKELLRLKKQRASXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSASIRIRPMINVPIC 240
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     RSASIRIRPMINVPIC
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLERTRSASIRIRPMINVPIC 240

Query: 241 TQVKSSVLPPLFPLKKGRFDR 261
           TQVKSSVLPPLFPLKKGRFDR
Sbjct: 241 TQVKSSVLPPLFPLKKGRFDR 261

[Close]

BLAST of CsaV3_6G038280 vs. NCBI nr
Match: XP_023547494.1 (uncharacterized protein LOC111806416 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 314.7 bits (805), Expect = 3.0e-82
Identity = 225/260 (86.54%), Postives = 236/260 (90.77%), Query Frame = 0


Query: 1   MVSIGSGGGSSVQASPPPSSPLPATEPNSSPRISFSSEFLDESNFISITPNSQIERDQEI 60
           MVSIGS G S V  S        ++EPNSSPRISFSSEFLDE++FISITPNS +ER+QEI
Sbjct: 1   MVSIGS-GCSVVHGS-------ASSEPNSSPRISFSSEFLDENDFISITPNSHLEREQEI 60

Query: 61  CERQKKDRSEKLAWSADFEFLSNKVSSHSMITADELFFEGKLLPFWQMQQAERLNKISLK 120
            ERQKKDRSEKLAWSADFEFLSNKVSSHSMITADELFFEGKLLPFWQMQQAERLNKISLK
Sbjct: 61  SERQKKDRSEKLAWSADFEFLSNKVSSHSMITADELFFEGKLLPFWQMQQAERLNKISLK 120

Query: 121 SPKDVDEEDLVEIEVNKEAENKVNWFLDDDPSPRPPKCTVLWKELLRLKKQXXXXXXXXX 180
           S KDVD++ LV+IEVNK+AENKVNW LDDDPSPRPPKCTVLWKELLRLKKQ   XXXXXX
Sbjct: 121 SSKDVDKQGLVDIEVNKKAENKVNWLLDDDPSPRPPKCTVLWKELLRLKKQRASXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSASIRIRPMINVPICT 240
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   SIRIRPMINVPICT
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSIRIRPMINVPICT 240

Query: 241 QVKSSVLPPLFPLKKGRFDR 261
           Q+KSSVLPPLFPLKKGRFDR
Sbjct: 241 QLKSSVLPPLFPLKKGRFDR 252

[Close]

BLAST of CsaV3_6G038280 vs. TAIR10
Match: AT3G05980.1 (unknown protein)

HSP 1 Score: 156.0 bits (393), Expect = 3.2e-38
Identity = 144/244 (59.02%), Postives = 174/244 (71.31%), Query Frame = 0


Query: 27  PNSSPRISFSSEFLDESNFISITPNSQIERDQEICERQKKDRSEKLAWSADFEFLSNK-V 86
           P   PRISFSS+  D  +FI ITP         +C+      S K+   +DFEFLS++ V
Sbjct: 13  PLLGPRISFSSDLSDGGDFICITP--------VMCKEDVVKGSVKV---SDFEFLSSENV 72

Query: 87  SSHSMITADELFFEGKLLPFWQMQQAERLNKISLKSPKDVDEEDLVEIEVNKE------A 146
           S   M+TADELF EGKLLPFWQ++ +E+L  I+LK+ ++ +E +  ++EV K+       
Sbjct: 73  SPQRMLTADELFSEGKLLPFWQVKHSEKLKNITLKTNEE-EEAEKRKVEVKKKDQEINNR 132

Query: 147 ENKVNWFLDDDPSPRPPKCTVLWKELLRLKKQXXXXXXXXXXXXXXXXXXXXXXXXXXXX 206
           +N+V WF+D+DPSPRPPKCTVLWKELLRLKKQ            XXXXXXXXXXXXXXXX
Sbjct: 133 DNRVTWFIDEDPSPRPPKCTVLWKELLRLKKQ-RNPSSSPVTARXXXXXXXXXXXXXXXX 192

Query: 207 XXXXXXXXXXXXXXXXXXXXXXXXRSASIRIRPMINVPICTQVKSSV-LPPLFP--LKKG 261
           XXXXXXXXXXXXXXXXXXXXXX  RSAS+RIRPMI+VPICT  KSS+ LPPLFP  LKK 
Sbjct: 193 XXXXXXXXXXXXXXXXXXXXXXRTRSASMRIRPMIHVPICTPSKSSLPLPPLFPLSLKKN 243

[Close]

BLAST of CsaV3_6G038280 vs. TAIR10
Match: AT5G19340.1 (unknown protein)

HSP 1 Score: 64.7 bits (156), Expect = 9.7e-11
Identity = 44/111 (39.64%), Postives = 68/111 (61.26%), Query Frame = 0


Query: 19  SSPLPATEPNSS-PRISFSSEFL---DESNFISITPNSQIERDQEICERQKKDRSEKLAW 78
           ++ +   EP+++ PRISFS++      + +FI I P   +     I  R++KD+S   A 
Sbjct: 6   TATMAEAEPSTTGPRISFSADLSSSDSDGDFICINPVMNL-----IVGREEKDKSSVKA- 65

Query: 79  SADFEFLSNKVSSHSMITADELFFEGKLLPFWQMQQAERLNKISLKSPKDV 126
             DFEFLS      +M++ADELF EGKLLPFWQ++ +E+L  ++LK   +V
Sbjct: 66  -GDFEFLSENA---TMLSADELFSEGKLLPFWQVKHSEKLKNVTLKPKVEV 106

[Close]

BLAST of CsaV3_6G038280 vs. TAIR10
Match: AT3G12970.1 (unknown protein)

HSP 1 Score: 46.6 bits (109), Expect = 2.7e-05
Identity = 31/95 (32.63%), Postives = 51/95 (53.68%), Query Frame = 0


Query: 77  DFEFLSNKVSSHSMITADELFFEGKLLPFWQMQQAERLNKISLKSPKDVDEEDLVEIEVN 136
           DFEFL       +M++ADELF +GKL+P        + + ++    K +       ++  
Sbjct: 43  DFEFLLE--DPVTMLSADELFSDGKLVPL-------KFSGVTYPEEKPITSVVHTAVKPC 102

Query: 137 KEAENKVNWFLDDDP-SPRPPKCTVLWKELLRLKK 171
           +  E +++  +D    SPR P+CTV W+ELL LK+
Sbjct: 103 RRLEMEISGVVDPYLFSPRAPRCTVRWRELLGLKR 128

[Close]

BLAST of CsaV3_6G038280 vs. TAIR10
Match: AT5G66800.1 (unknown protein)

HSP 1 Score: 46.6 bits (109), Expect = 2.7e-05
Identity = 35/98 (35.71%), Postives = 54/98 (55.10%), Query Frame = 0


Query: 30  SPRISFSSEFLDESNFISITPNSQIERDQEICERQKKDRSEKLAWSADFEFLSNKVSSHS 89
           SPRISFS++      F+ I P +          +Q+   S   ++S +FEF    VS+++
Sbjct: 18  SPRISFSND------FVEIRPETTKTTRSSPLSKQEGSSS---SFSDNFEF---SVSNYT 77

Query: 90  MITADELFFEGKLLPFWQMQQAERLNKISLKSPKDVDE 128
           M+ ADELF +GKLLPF +  Q +R  +  L   +D +E
Sbjct: 78  MMPADELFSKGKLLPFKETNQVQRTLREELLVEEDEEE 103

[Close]

BLAST of CsaV3_6G038280 vs. TAIR10
Match: AT1G79060.1 (unknown protein)

HSP 1 Score: 42.0 bits (97), Expect = 6.7e-04
Identity = 31/103 (30.10%), Postives = 50/103 (48.54%), Query Frame = 0


Query: 68  RSEKLAWSADFEFLSNKVSSHSMITADELFFEGKLLPFWQMQQAERLNKISLKSPKDVDE 127
           + E    + DFEF   +     M+ ADELF +GKL+   Q QQ   +     +       
Sbjct: 45  KEETAVGAGDFEFRLEE-DPVGMLPADELFSDGKLVTKQQQQQTTEIGGKCRRM------ 104

Query: 128 EDLVEIEVNKEAENKVNWFLDDDPSPRPPKCTVLWKELLRLKK 171
            ++VEIE++   +N          SP+ P+C+  W++LL LK+
Sbjct: 105 -EVVEIEISGGGDN-------CSFSPKAPRCSSRWRDLLGLKR 132

[Close]

BLAST of CsaV3_6G038280 vs. TrEMBL
Match: tr|A0A1S3BMY8|A0A1S3BMY8_CUCME (uncharacterized protein LOC103491410 OS=Cucumis melo OX=3656 GN=LOC103491410 PE=4 SV=1)

HSP 1 Score: 340.5 bits (872), Expect = 3.3e-90
Identity = 239/260 (91.92%), Postives = 239/260 (91.92%), Query Frame = 0


Query: 1   MVSIGSGGGSSVQASPPPSSPLPATEPNSSPRISFSSEFLDESNFISITPNSQIERDQEI 60
           MVSIG GGG                   SSPRISFSSEFLDESNFISITPNSQIERDQEI
Sbjct: 1   MVSIGIGGGXXXXXXXXXXXXXXXXXXXSSPRISFSSEFLDESNFISITPNSQIERDQEI 60

Query: 61  CERQKKDRSEKLAWSADFEFLSNKVSSHSMITADELFFEGKLLPFWQMQQAERLNKISLK 120
           CERQKKDRSEKLAWSADFEFLSNKVSSHSMITADELFFEGKLLPFWQMQQAERLNKISLK
Sbjct: 61  CERQKKDRSEKLAWSADFEFLSNKVSSHSMITADELFFEGKLLPFWQMQQAERLNKISLK 120

Query: 121 SPKDVDEEDLVEIEVNKEAENKVNWFLDDDPSPRPPKCTVLWKELLRLKKQXXXXXXXXX 180
           SPKDVDEEDLVEIEVNKEAENKVNWFLDDDPSPRPPKCTVLWKELLRLKKQXXXXXXXXX
Sbjct: 121 SPKDVDEEDLVEIEVNKEAENKVNWFLDDDPSPRPPKCTVLWKELLRLKKQXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSASIRIRPMINVPICT 240
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX RSASIRIRPMINVPICT
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRSASIRIRPMINVPICT 240

Query: 241 QVKSSVLPPLFPLKKGRFDR 261
           QVKSSVLPPLFPLKKGRFDR
Sbjct: 241 QVKSSVLPPLFPLKKGRFDR 260

[Close]

BLAST of CsaV3_6G038280 vs. TrEMBL
Match: tr|A0A061ELS3|A0A061ELS3_THECC (SEY1 OS=Theobroma cacao OX=3641 GN=TCM_020574 PE=4 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 7.0e-56
Identity = 176/234 (75.21%), Postives = 200/234 (85.47%), Query Frame = 0


Query: 26  EPNSSPRISFSSEFLDESNFISITPNSQIERDQEICERQKKDRSEKLAWSADFEFLSNKV 85
           EP SSPRISFS++FLDE+NFISI P+SQ E + +   ++ K+  +  A +A+FEFLS+ V
Sbjct: 14  EPTSSPRISFSADFLDENNFISINPHSQNEENGQDKGKEAKEWEKDKARAAEFEFLSSNV 73

Query: 86  SSHSMITADELFFEGKLLPFWQMQQAERLNKISLKSPKDVDEEDLVEIEVNKEAENKVNW 145
           SSH+M+TADELFFEGKLLPFWQMQ +E+LNKISLK+ K  +EE   E EVNKE E++V+W
Sbjct: 74  SSHAMLTADELFFEGKLLPFWQMQHSEKLNKISLKT-KASEEEG--EEEVNKE-ESRVSW 133

Query: 146 FLDDDPSPRPPKCTVLWKELLRLKKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 205
           F+DDDPSPRPPKCTVLWKELLRLKKQ  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 134 FVDDDPSPRPPKCTVLWKELLRLKKQ-RXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 193

Query: 206 XXXXXXXXXXXXXXXXXXRSASIRIRPMINVPICTQVKSSVLPPLFPLKKGRFD 260
           XXXXXXXXXXXX      RSASIRIRPMINVPICTQVKSS LPPLFPLKKGR +
Sbjct: 194 XXXXXXXXXXXXKGLERTRSASIRIRPMINVPICTQVKSSALPPLFPLKKGRLE 242

[Close]

BLAST of CsaV3_6G038280 vs. TrEMBL
Match: tr|A0A0A0KJW0|A0A0A0KJW0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G425090 PE=4 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 4.5e-55
Identity = 171/171 (100.00%), Postives = 171/171 (100.00%), Query Frame = 0


Query: 90  MITADELFFEGKLLPFWQMQQAERLNKISLKSPKDVDEEDLVEIEVNKEAENKVNWFLDD 149
           MITADELFFEGKLLPFWQMQQAERLNKISLKSPKDVDEEDLVEIEVNKEAENKVNWFLDD
Sbjct: 1   MITADELFFEGKLLPFWQMQQAERLNKISLKSPKDVDEEDLVEIEVNKEAENKVNWFLDD 60

Query: 150 DPSPRPPKCTVLWKELLRLKKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 209
           DPSPRPPKCTVLWKELLRLKKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  DPSPRPPKCTVLWKELLRLKKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 210 XXXXXXXXXXXXXXRSASIRIRPMINVPICTQVKSSVLPPLFPLKKGRFDR 261
           XXXXXXXXXXXXXXRSASIRIRPMINVPICTQVKSSVLPPLFPLKKGRFDR
Sbjct: 121 XXXXXXXXXXXXXXRSASIRIRPMINVPICTQVKSSVLPPLFPLKKGRFDR 171

[Close]

BLAST of CsaV3_6G038280 vs. TrEMBL
Match: tr|B9RTZ0|B9RTZ0_RICCO (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_0913970 PE=4 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 5.9e-55
Identity = 150/235 (63.83%), Postives = 177/235 (75.32%), Query Frame = 0


Query: 29  SSPRISFSSEFLDESNFISITPNSQIERDQEICERQKKDRSEKLAWSADFEFLS--NKVS 88
           SSPRISFS+EFLDE+NFISI PN++ ERDQE+      +R +   ++ADFEFLS  + +S
Sbjct: 18  SSPRISFSAEFLDENNFISINPNARAERDQEM------EREKARNYAADFEFLSGNSTMS 77

Query: 89  SH-SMITADELFFEGKLLPFWQMQQAERLNKISLKSPKDVDEEDLVEIEVNKEAENKVNW 148
           SH +M+TADELFFEGKLLPFWQMQQ+E+L+KI+LK  K+ +E +  E+EVN + E +V+W
Sbjct: 78  SHATMLTADELFFEGKLLPFWQMQQSEKLHKINLKC-KETEEGEEEEVEVNNKEEPRVSW 137

Query: 149 FLDDDPSPRPPKCTVLWKELLRLKKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 208
           F+DDDPSPRPPKCTVLWKELLRLK  XXXXXXXXXXXXXXXXXXXXXXX           
Sbjct: 138 FVDDDPSPRPPKCTVLWKELLRLKXXXXXXXXXXXXXXXXXXXXXXXXXIVTAEEGKEGC 197

Query: 209 XXXXXXXXXXXXXXXXXXRSASIRIRPMINVPICTQVKSSVLPPLFPLKKGRFDR 261
                             RSA+IRIRPMINVPICTQVKSS LPPLFPLKKGR +R
Sbjct: 198 GNKEKHAGKRMKKGLERTRSATIRIRPMINVPICTQVKSSALPPLFPLKKGRLER 245

[Close]

BLAST of CsaV3_6G038280 vs. TrEMBL
Match: tr|A0A1Q3C3Z0|A0A1Q3C3Z0_CEPFO (Uncharacterized protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_18273 PE=4 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 2.9e-54
Identity = 173/232 (74.57%), Postives = 196/232 (84.48%), Query Frame = 0


Query: 29  SSPRISFSSEFLDESNFISITPNSQIERDQEICERQKKDRSEKLAWSADFEFLSNKVSSH 88
           SSPRISFSSEFLDE+N+ISITP SQ E+DQ+  ER+K         + DFEFLS+ +SSH
Sbjct: 18  SSPRISFSSEFLDENNYISITPPSQREKDQQ-TEREKPR-------NVDFEFLSSSLSSH 77

Query: 89  SMITADELFFEGKLLPFWQMQQAERLNKISLKSPKDVDEEDLVEIEVNKEAENKVNWFLD 148
            M+TADELFF+GKLLPFWQMQQ+E+LNKI+LK+     ++D +E+EVNK  E + +WF+D
Sbjct: 78  KMLTADELFFDGKLLPFWQMQQSEKLNKINLKA-----KDDEIEVEVNK-GETRASWFVD 137

Query: 149 DDPSPRPPKCTVLWKELLRLKKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 208
           DDPSPRPPKCTVLWKELLRLKKQ  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 138 DDPSPRPPKCTVLWKELLRLKKQ-RXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 197

Query: 209 XXXXXXXXXXXXXXXRSASIRIRPMINVPICTQVKSSVLPPLFPLKKGRFDR 261
           XXXXXXXXXX     R+AS RIRPMINVPICTQVKSS LPPLFPLKKGR +R
Sbjct: 198 XXXXXXXXXXGLERTRTASGRIRPMINVPICTQVKSSSLPPLFPLKKGRLER 234

The following BLAST results are available for this feature:

BLAST of CsaV3_6G038280 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004140154.1	2.1e-104	100.00	PREDICTED: uncharacterized protein LOC101216953 [Cucumis sativus]	[more]
XP_008449565.1	5.0e-90	91.92	PREDICTED: uncharacterized protein LOC103491410 [Cucumis melo]	[more]
XP_022930387.1	1.8e-87	85.38	uncharacterized protein LOC111436849 [Cucurbita moschata] >XP_023000022.1 unchar...	[more]
XP_022138704.1	2.0e-83	85.44	uncharacterized protein LOC111009802 [Momordica charantia]	[more]
XP_023547494.1	3.0e-82	86.54	uncharacterized protein LOC111806416 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsaV3_6G038280 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G05980.1	3.2e-38	59.02	unknown protein	[more]
AT5G19340.1	9.7e-11	39.64	unknown protein	[more]
AT3G12970.1	2.7e-05	32.63	unknown protein	[more]
AT5G66800.1	2.7e-05	35.71	unknown protein	[more]
AT1G79060.1	6.7e-04	30.10	unknown protein	[more]

BLAST of CsaV3_6G038280 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CsaV3_6G038280 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BMY8\|A0A1S3BMY8_CUCME	3.3e-90	91.92	uncharacterized protein LOC103491410 OS=Cucumis melo OX=3656 GN=LOC103491410 PE=...	[more]
tr\|A0A061ELS3\|A0A061ELS3_THECC	7.0e-56	75.21	SEY1 OS=Theobroma cacao OX=3641 GN=TCM_020574 PE=4 SV=1	[more]
tr\|A0A0A0KJW0\|A0A0A0KJW0_CUCSA	4.5e-55	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G425090 PE=4 SV=1	[more]
tr\|B9RTZ0\|B9RTZ0_RICCO	5.9e-55	63.83	Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_0913970 PE=4 SV=1	[more]
tr\|A0A1Q3C3Z0\|A0A1Q3C3Z0_CEPFO	2.9e-54	74.57	Uncharacterized protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_18273 PE=4...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_6G038280.1	CsaV3_6G038280.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 173..196
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 204..222
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 171..222
None	No IPR available	PANTHER	PTHR31722	FAMILY NOT NAMED	coord: 25..260
None	No IPR available	PANTHER	PTHR31722:SF2	SUBFAMILY NOT NAMED	coord: 25..260

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_6G038280	CmaCh17G002530	Cucurbita maxima (Rimu)	cmacucB0444
CsaV3_6G038280	CmaCh08G011580	Cucurbita maxima (Rimu)	cmacucB1068
CsaV3_6G038280	CmoCh17G002390	Cucurbita moschata (Rifu)	cmocucB0436
CsaV3_6G038280	Cp4.1LG17g01420	Cucurbita pepo (Zucchini)	cpecucB0411
CsaV3_6G038280	Carg05432	Silver-seed gourd	carcucB0083
CsaV3_6G038280	Cla009393	Watermelon (97103) v1	cucwmB573
CsaV3_6G038280	MELO3C014491	Melon (DHL92) v3.5.1	cucmeB503
CsaV3_6G038280	ClCG06G006000	Watermelon (Charleston Gray)	cucwcgB505
CsaV3_6G038280	Lsi09G013370	Bottle gourd (USVL1VR-Ls)	cuclsiB421
CsaV3_6G038280	MELO3C014491.2	Melon (DHL92) v3.6.1	cucmedB490
CsaV3_6G038280	Cla97C06G115490	Watermelon (97103) v2	cucwmbB495
CsaV3_6G038280	Bhi12G001621	Wax gourd	cucwgoB567

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_6G038280	Silver-seed gourd	carcucB0357
CsaV3_6G038280	Cucumber (Gy14) v2	cgybcucB298
CsaV3_6G038280	Cucumber (Gy14) v1	cgycucB297
CsaV3_6G038280	Cucurbita moschata (Rifu)	cmocucB1050
CsaV3_6G038280	Cucurbita pepo (Zucchini)	cpecucB0169
CsaV3_6G038280	Cucurbita pepo (Zucchini)	cpecucB0854
CsaV3_6G038280	Wild cucumber (PI 183967)	cpicucB363