CsaV3_6G036730 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_6G036730
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	MEF2BNB-like protein
Location	chr6 : 20512239 .. 20517468 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AAACAATGCAAGAGGGAGAAAAATGGGGTGGTAGTCCTGCAAGGCAAAGCCCCACCAGATTCAATGGCAGACCTCTGCTGACGAATATAAATTCGAATTTGTCTCTACCTGCCATCATCGCCTAACTTTTTCCATAAAAGCTTCAGGAACAAGAAGAAGATAAAACCCATAGCTGTTATCTCTCTCAAGAAGCACTGACCGCCTTGGTTTTCTAGGGTTTCCTGTAAGTTATCTTATTTCCGTTTTGCCAATTTATCCATAGTAGCTATGCTTGTTTTCTTATATATCGTCGCACTGGATGAAGAATGGAGATTCTGCTATTACTATGATGGTATTTTTTTGTTTATAATATGATATTTTAGCTGGGTGTTGGTAAAGAGAGAGTATTGAGGGCTGATGAAATTGCCCTATGATAAAAGTAATTCCAATTTTCTAGGAACGTAACTTTAGGTTTATCTCTGAATTATGGTCTCAGGTTAGTTTGGACACAAGCATCACTTCAATTTCATTTCAAACCAAGGATCAGATGAGAATTCTGCGATGTTAAGGGTTTTTGTAATGTTAATAAATAATAAATCTTCTTCATAGGTTTATCTACTTGTGCTATTACACCTTAGGCTTTTCAAGTCAATTCTTGTTGGATCCTTTCATCCAAAGGTATAATTCTTTTCTTTTTTTTGTCCGACAAGAAACATTCTGTTGATAGAATGAAATAAGAATCTAAATTGTTTATAAAAGAGATGTCCAATTGGAAACTAAGTAAGAAAGACTGAAGTGTTTAAAAGGGTGCTTATCTTTACACCAATTGAAAGCTCTAGACAGAACCAAGTCCATAAAACTATAAAACCAAAAAAGAGTTCCTAAAATGACGTTTTGTGCATTCTCTCTATAAACTTCAAAAGTAAGCACGAATATTCTCCAAAAAAATTGTATTCTGAGATCCTTTGAATAGGATGCCCCACCAAATGTATAATTCTTAGTCATACTGGCTTAGAGGTCCCAAGTTTGAACCTTCGAGGTGGGGTGCAGGTGCCCTCAAGTATAGACCAGCAAAGCTCCAAGTTCTGGTTATCGAAGAGAAAAAAAGTATAAACTCTCCAATCAAGCTGTAACAAATCACTACTTTGTCATCAATATCATAGTTTGGGGCCGAGTTAAAGACACAAGACATAACAACTCTTGTTGGTGTTGGGAATTTAGGAGGTGCAAGCTGGTGTGGGTAGGCTGAGTTTGCTTTTTTCCCCTTTTGTTCAAAGTCTGATGCTGAGCTGATATTTCAGTTGAGCAAAAATATAAAACAAACTCAAAGAAAGAATGTTGTTTTCATTTTGTTAAAAAATCATATCAACTGCCTCCCAAAAAATAAAAATGATTGATTCTCAGTACTGTTGGTTCCGTGCATGGTTGACCGGAGGCAGTCTTCTGAAGCAGTGTCAATGCTACTCTTAAAATACTTCCTGGTCATACGCTAAAATGAGAAGAATGAGAAGAATGGTTTCTGAAGGGTTATTGCCACTACATAATATATGAAGCTTCCAATTAGGAATGGACACCTCTACTGAAAACCAATAGCAATAACTGATTCAAGGGCCATGGATCCAAATTATAAAATGCCGCAAAAGAGCCTAGAAATTGTTCAAATTTGAGTTGGAAGAAGGGATAAGGTCCTTCTCTGTAAGAACAAAGGGCTTCTAAATACTATGGTCAAATTGGTAATCCCCAGGCTTTTAATCACATCTGTAATTTGTGTACTGGCCACAGTTAAGCAGATAACTCATGCTGTTTTGGAACCTTGTGTATGTATGCACGGGTACACAGTGCTCTTGGACTTAATATTGAAAGTTGAAAGACAAAATTACTAGAGTCCATTTGATAACAGTCACAACCATGTTTTTCATATTTCGTAACTAAACCCTTGGATTTTAAGTTAAATTTCAAAAACAAATACGGGTTTCTAAAAGTATGGCTTTTGAAACACTCTTCAAGAGTAGATTGCAAATTAAAGAATTTAATAGGGGAAAGTATTGTTTATAGCTTAATTTTTAAATACAAAAAGCCAAATGGTTATCGTACAGGCCCTTGGGTTTTTTATTTTTGTGAAAATTAAGCTTATAAACACTACCCAAGAGTAAATTCAAGGAAAGTTTTGAAAACTAAGAATTTAAGATTTTAAAAACATGATTTTGTTCTTGAAATTTGGCTAAGAATTCAAATGTTTACTAGAAAAAATGAAAATCATGGTAAAGTAGTCGTGGAAAAACAAGTATGATATTTTAAAAAAAAACAATGGGACCTAGGTGTTTGATATGACTCATGGGTTGGAGTTGGACAACATCCTCAATGAGATTCATCTTCATCTTTATATGCCTTGGCATATGAAATTTGAATGTTGGTACTGCGTATAGAAATCGAGGTGACATGGATTCATTTTCTTTGCTTCTAGTAATCAGAAGAAAGTGAGGTGTAAAACTATGGGCATGACACTAGATTAGAGAAATGCTCTTTTGGATTAATATTTACAAAAGACTTCCCCAGTTAGATGTTTTACATAGTCTATTAGATTTTTTTTATTTTTCTTTTATGTGAACATGGTTATTGGTTGTAGACCCCTGCCAATGCCAAAACCAAAAGTAAGCAAGAAGGGCAAATATGGGCGACAGAGAAGATAAGAAGGCTGCCTTTTTCTATATAAATTTTGGACTTCACAAAATTTCCTGTTACATTGCGTTTCTTATTCTACTTTTAATTTTTATTTCCTAGTGTTGTTATGGCATTGCATTGCTGTTAATTTGTTTTGTTAACTGCATGAACAAATAACACTGTCAGTTATTCGGCAATTTGTTGTCTGTTTTCCATTTTTTTACCCTTTCATTTCCATTAGCAATTACAGTTGTTATGTTTAATAAACCCAGTGATGAACTGCCATTCACCTTTTTTTTTTTGATAAGAGACAAGTATATTCATATAACAAAACAGAACAACCTAAGGGCGAGGGATGAGAGGGCCCTCCCCGGAAGAAGCTAAGGAACTAAGACATAATGGCCTTCCAATTGTTGAAAATCATAGAAAGGCTATAATTACAAAAGTGTTTGGTGTAATTCGTACTCCACCAAGAGGCTGTGTGTTGAACCACAGTCCAAAAAGAATCAAAAGAATTAAATCTATCGTCAAAGATTCTGCTATTCCTTTCTTTCCAAATGCTCCACAAAAGGGAACGCGTCGCGCATTTCCATAAGATGTTTCCTTTAGGGCTGTAACCTCTAAAGTTAAGACCTTCAATCATCCATCTATCAATCTTGCTAGGAAGGCAAAGCTCCAAATCGAAAATACCAAACAGAGTGTACCAAGCTTTTCTTGTGAAGGGACAATGTAGAAATAAATGATCCAACGTTTCCTCATCTTTAGCGCATAGGCAACACATCGAGGGGCTAAGCAAAGTGTTCCGAATTTTTTTTTGTAGTTTCTCATGGGTGTTGAGGCTTCTGTAAGCAAGGATGCATGGATTCTCTACAGTTGACGGCTTTGTGGAGATAGCTGAAAGCTCGGCAGAGATGATCAAGTATATAGCAAATGAACCTTCAACTGGGCTTTTCTACATTCAACAGCATACAAAAAATGCTGTTCCCAATGTTATCAATCTGAAGAATAGTGTGGTACACAAATCTCATGAAACAACTCTCCACACTGAAGATTCGGAGGATTCGATCACGATGTTAAGATCGATGAAAGAATGTGGTTTTCCTATTGCTGATGAGATGATCAGAGACATAAGGAAGTCTCTTGCTATAATGTCAACCAAACAGCCAAGAAGGGGCTTGATCCATAATACTTCTGGCATGCAGCAACAACAGCCAGGGAGAATGAGCACCTGGAGATCGACCAGTTGGGGGCGAAGAGCAATTGGAGCCCCATTTAATGATGACAGTGGAGGTTATATTTCAACAGTATTCAAGTCAGCAAGAGAAAAGGCGAGCAACTTTAAGTGGCCACAGCTTGACATCAAGGAAGATCTTGCAGAAGTTGAAGTTGATAAACTACAGCCACAAGCTATCCAACCGCCAGTTGCTTCTACTACTTCTAGCTCGTCACAGCCAGATGTGGACAATGAGGAGTTGCCTCTGTCCAGTCAAGTTAATGATCAGTCGCAACAGGATGACATGGTTGATGAATGCTTGAATACTGATTTACTTTCGGTGTCCGATAACTTCGATGATTTCAGGGCTGATAAAGAAGCGAAACTGGAGGAGTGGTTGGGAGGATCTAGCGGCTTGAATAATTTAAGAGATTTGAGGGCAGGGTAAGGCCATTGACATTGATTTTGAAGTAGTGTTGATGCCTTTTACAGTGCCTTTTTTTACTGTAAAAATGATAATAACAAAAATCACTCTAGACACACGTTCTTTTCTTCATTTTGTCCGACCCCGAATTGCACTAGTGAAGAGTTGTATTTCCATAGCTTTGTAACATGATGTTATTCTTACTGGAATAAGTATTTACTGAGTGCCATATGTTCAATTTTACCTTTCACATTTGAAAACTGATAAAGGATTTCAATACAATTGTACCTAGAAGGTACTGGACTGTCTTGGAAATTAAACTGCTTGGTTTAAGGATTGGCTGG

mRNA sequence

ATGATCAAGTATATAGCAAATGAACCTTCAACTGGGCTTTTCTACATTCAACAGCATACAAAAAATGCTGTTCCCAATGTTATCAATCTGAAGAATAGTGTGGTACACAAATCTCATGAAACAACTCTCCACACTGAAGATTCGGAGGATTCGATCACGATGTTAAGATCGATGAAAGAATGTGGTTTTCCTATTGCTGATGAGATGATCAGAGACATAAGGAAGTCTCTTGCTATAATGTCAACCAAACAGCCAAGAAGGGGCTTGATCCATAATACTTCTGGCATGCAGCAACAACAGCCAGGGAGAATGAGCACCTGGAGATCGACCAGTTGGGGGCGAAGAGCAATTGGAGCCCCATTTAATGATGACAGTGGAGGTTATATTTCAACAGTATTCAAGTCAGCAAGAGAAAAGGCGAGCAACTTTAAGTGGCCACAGCTTGACATCAAGGAAGATCTTGCAGAAGTTGAAGTTGATAAACTACAGCCACAAGCTATCCAACCGCCAGTTGCTTCTACTACTTCTAGCTCGTCACAGCCAGATGTGGACAATGAGGAGTTGCCTCTGTCCAGTCAAGTTAATGATCAGTCGCAACAGGATGACATGGTTGATGAATGCTTGAATACTGATTTACTTTCGGTGTCCGATAACTTCGATGATTTCAGGGCTGATAAAGAAGCGAAACTGGAGGAGTGGTTGGGAGGATCTAGCGGCTTGAATAATTTAAGAGATTTGAGGGCAGGGTAA

Coding sequence (CDS)

ATGATCAAGTATATAGCAAATGAACCTTCAACTGGGCTTTTCTACATTCAACAGCATACAAAAAATGCTGTTCCCAATGTTATCAATCTGAAGAATAGTGTGGTACACAAATCTCATGAAACAACTCTCCACACTGAAGATTCGGAGGATTCGATCACGATGTTAAGATCGATGAAAGAATGTGGTTTTCCTATTGCTGATGAGATGATCAGAGACATAAGGAAGTCTCTTGCTATAATGTCAACCAAACAGCCAAGAAGGGGCTTGATCCATAATACTTCTGGCATGCAGCAACAACAGCCAGGGAGAATGAGCACCTGGAGATCGACCAGTTGGGGGCGAAGAGCAATTGGAGCCCCATTTAATGATGACAGTGGAGGTTATATTTCAACAGTATTCAAGTCAGCAAGAGAAAAGGCGAGCAACTTTAAGTGGCCACAGCTTGACATCAAGGAAGATCTTGCAGAAGTTGAAGTTGATAAACTACAGCCACAAGCTATCCAACCGCCAGTTGCTTCTACTACTTCTAGCTCGTCACAGCCAGATGTGGACAATGAGGAGTTGCCTCTGTCCAGTCAAGTTAATGATCAGTCGCAACAGGATGACATGGTTGATGAATGCTTGAATACTGATTTACTTTCGGTGTCCGATAACTTCGATGATTTCAGGGCTGATAAAGAAGCGAAACTGGAGGAGTGGTTGGGAGGATCTAGCGGCTTGAATAATTTAAGAGATTTGAGGGCAGGGTAA

Protein sequence

MIKYIANEPSTGLFYIQQHTKNAVPNVINLKNSVVHKSHETTLHTEDSEDSITMLRSMKECGFPIADEMIRDIRKSLAIMSTKQPRRGLIHNTSGMQQQQPGRMSTWRSTSWGRRAIGAPFNDDSGGYISTVFKSAREKASNFKWPQLDIKEDLAEVEVDKLQPQAIQPPVASTTSSSSQPDVDNEELPLSSQVNDQSQQDDMVDECLNTDLLSVSDNFDDFRADKEAKLEEWLGGSSGLNNLRDLRAG

Homology

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BLAST of CsaV3_6G036730 vs. NCBI nr
Match: XP_011657506.1 (PREDICTED: uncharacterized protein LOC101218921 [Cucumis sativus] >XP_011657507.1 PREDICTED: uncharacterized protein LOC101218921 [Cucumis sativus] >XP_011657508.1 PREDICTED: uncharacterized protein LOC101218921 [Cucumis sativus] >KGN47848.1 hypothetical protein Csa_6G407090 [Cucumis sativus])

HSP 1 Score: 490.0 bits (1260), Expect = 4.9e-135
Identity = 249/249 (100.00%), Postives = 249/249 (100.00%), Query Frame = 0


Query: 1   MIKYIANEPSTGLFYIQQHTKNAVPNVINLKNSVVHKSHETTLHTEDSEDSITMLRSMKE 60
           MIKYIANEPSTGLFYIQQHTKNAVPNVINLKNSVVHKSHETTLHTEDSEDSITMLRSMKE
Sbjct: 20  MIKYIANEPSTGLFYIQQHTKNAVPNVINLKNSVVHKSHETTLHTEDSEDSITMLRSMKE 79

Query: 61  CGFPIADEMIRDIRKSLAIMSTKQPRRGLIHNTSGMQQQQPGRMSTWRSTSWGRRAIGAP 120
           CGFPIADEMIRDIRKSLAIMSTKQPRRGLIHNTSGMQQQQPGRMSTWRSTSWGRRAIGAP
Sbjct: 80  CGFPIADEMIRDIRKSLAIMSTKQPRRGLIHNTSGMQQQQPGRMSTWRSTSWGRRAIGAP 139

Query: 121 FNDDSGGYISTVFKSAREKASNFKWPQLDIKEDLAEVEVDKLQPQAIQPPVASTTSSSSQ 180
           FNDDSGGYISTVFKSAREKASNFKWPQLDIKEDLAEVEVDKLQPQAIQPPVASTTSSSSQ
Sbjct: 140 FNDDSGGYISTVFKSAREKASNFKWPQLDIKEDLAEVEVDKLQPQAIQPPVASTTSSSSQ 199

Query: 181 PDVDNEELPLSSQVNDQSQQDDMVDECLNTDLLSVSDNFDDFRADKEAKLEEWLGGSSGL 240
           PDVDNEELPLSSQVNDQSQQDDMVDECLNTDLLSVSDNFDDFRADKEAKLEEWLGGSSGL
Sbjct: 200 PDVDNEELPLSSQVNDQSQQDDMVDECLNTDLLSVSDNFDDFRADKEAKLEEWLGGSSGL 259

Query: 241 NNLRDLRAG 250
           NNLRDLRAG
Sbjct: 260 NNLRDLRAG 268

[Close]

BLAST of CsaV3_6G036730 vs. NCBI nr
Match: XP_008456524.1 (PREDICTED: uncharacterized protein LOC103496452 isoform X1 [Cucumis melo] >XP_008456525.1 PREDICTED: uncharacterized protein LOC103496452 isoform X1 [Cucumis melo])

HSP 1 Score: 472.6 bits (1215), Expect = 8.1e-130
Identity = 239/249 (95.98%), Postives = 245/249 (98.39%), Query Frame = 0


Query: 1   MIKYIANEPSTGLFYIQQHTKNAVPNVINLKNSVVHKSHETTLHTEDSEDSITMLRSMKE 60
           MIKYIANEPSTGLFYIQQHTKNAVPNVINLKNSVV KSHETTLHTEDSEDSI MLRSMKE
Sbjct: 20  MIKYIANEPSTGLFYIQQHTKNAVPNVINLKNSVVDKSHETTLHTEDSEDSIAMLRSMKE 79

Query: 61  CGFPIADEMIRDIRKSLAIMSTKQPRRGLIHNTSGMQQQQPGRMSTWRSTSWGRRAIGAP 120
           CGFPIADEMIRDIRKSLAIMSTKQPRRGLIHNTSGMQQQQPGRMSTWRS +WGRRAIGAP
Sbjct: 80  CGFPIADEMIRDIRKSLAIMSTKQPRRGLIHNTSGMQQQQPGRMSTWRSATWGRRAIGAP 139

Query: 121 FNDDSGGYISTVFKSAREKASNFKWPQLDIKEDLAEVEVDKLQPQAIQPPVASTTSSSSQ 180
           FNDDSGGYISTVFKSAREKASNFKWPQLDIKEDLA+VEVDKLQPQ+IQPPVASTTSSSSQ
Sbjct: 140 FNDDSGGYISTVFKSAREKASNFKWPQLDIKEDLADVEVDKLQPQSIQPPVASTTSSSSQ 199

Query: 181 PDVDNEELPLSSQVNDQSQQDDMVDECLNTDLLSVSDNFDDFRADKEAKLEEWLGGSSGL 240
           PD+DNEELPLSSQVND+SQQDD VDECLNTDLLSVSDNFDDFRADKEAKLEEWLGGSSGL
Sbjct: 200 PDMDNEELPLSSQVNDESQQDDRVDECLNTDLLSVSDNFDDFRADKEAKLEEWLGGSSGL 259

Query: 241 NNLRDLRAG 250
           N+LRDLRAG
Sbjct: 260 NDLRDLRAG 268

[Close]

BLAST of CsaV3_6G036730 vs. NCBI nr
Match: XP_008456526.1 (PREDICTED: uncharacterized protein LOC103496452 isoform X2 [Cucumis melo])

HSP 1 Score: 472.6 bits (1215), Expect = 8.1e-130
Identity = 239/249 (95.98%), Postives = 245/249 (98.39%), Query Frame = 0


Query: 1   MIKYIANEPSTGLFYIQQHTKNAVPNVINLKNSVVHKSHETTLHTEDSEDSITMLRSMKE 60
           MIKYIANEPSTGLFYIQQHTKNAVPNVINLKNSVV KSHETTLHTEDSEDSI MLRSMKE
Sbjct: 1   MIKYIANEPSTGLFYIQQHTKNAVPNVINLKNSVVDKSHETTLHTEDSEDSIAMLRSMKE 60

Query: 61  CGFPIADEMIRDIRKSLAIMSTKQPRRGLIHNTSGMQQQQPGRMSTWRSTSWGRRAIGAP 120
           CGFPIADEMIRDIRKSLAIMSTKQPRRGLIHNTSGMQQQQPGRMSTWRS +WGRRAIGAP
Sbjct: 61  CGFPIADEMIRDIRKSLAIMSTKQPRRGLIHNTSGMQQQQPGRMSTWRSATWGRRAIGAP 120

Query: 121 FNDDSGGYISTVFKSAREKASNFKWPQLDIKEDLAEVEVDKLQPQAIQPPVASTTSSSSQ 180
           FNDDSGGYISTVFKSAREKASNFKWPQLDIKEDLA+VEVDKLQPQ+IQPPVASTTSSSSQ
Sbjct: 121 FNDDSGGYISTVFKSAREKASNFKWPQLDIKEDLADVEVDKLQPQSIQPPVASTTSSSSQ 180

Query: 181 PDVDNEELPLSSQVNDQSQQDDMVDECLNTDLLSVSDNFDDFRADKEAKLEEWLGGSSGL 240
           PD+DNEELPLSSQVND+SQQDD VDECLNTDLLSVSDNFDDFRADKEAKLEEWLGGSSGL
Sbjct: 181 PDMDNEELPLSSQVNDESQQDDRVDECLNTDLLSVSDNFDDFRADKEAKLEEWLGGSSGL 240

Query: 241 NNLRDLRAG 250
           N+LRDLRAG
Sbjct: 241 NDLRDLRAG 249

[Close]

BLAST of CsaV3_6G036730 vs. NCBI nr
Match: XP_022939810.1 (uncharacterized protein LOC111445573 isoform X2 [Cucurbita moschata])

HSP 1 Score: 399.8 bits (1026), Expect = 6.7e-108
Identity = 203/246 (82.52%), Postives = 224/246 (91.06%), Query Frame = 0


Query: 1   MIKYIANEPSTGLFYIQQHTKNAVPNVINLKNSVVHKSHETTLHTEDSEDSITMLRSMKE 60
           MIKYIANEPSTGLFYIQQHTKNAVPNVINLKNSVV KSHETTLH EDSEDSITML+SMK+
Sbjct: 1   MIKYIANEPSTGLFYIQQHTKNAVPNVINLKNSVVDKSHETTLHAEDSEDSITMLQSMKD 60

Query: 61  CGFPIADEMIRDIRKSLAIMSTKQPRRGLIHNTSGMQQQQPGRMSTWRSTSWGRRAIGAP 120
           CGFPIADEMIRDI+KSLA+MSTKQPRRGLI NTSG   QQPGRMSTWRS +WGR AI AP
Sbjct: 61  CGFPIADEMIRDIKKSLAVMSTKQPRRGLIRNTSG--TQQPGRMSTWRSATWGRSAIVAP 120

Query: 121 FNDDSGGYISTVFKSAREKASNFKWPQLDIKEDLAEVEVDKLQPQAIQPPVASTTSSSSQ 180
            +DDSGGYISTVFKSAREKASNFKWPQLDIKEDLA VEVD+L PQ  +PPVAS +S+SSQ
Sbjct: 121 RDDDSGGYISTVFKSAREKASNFKWPQLDIKEDLARVEVDELPPQPNEPPVASASSTSSQ 180

Query: 181 PDVDNEELPLSSQVNDQSQQDDMVDECLNTDLLSVSDNFDDFRADKEAKLEEWLGGSSGL 240
           PD+D EELPL+ QVND+ Q+D+ VD  +NTDLLSVSDNFDDFRADKEAKLEEWLGGS GL
Sbjct: 181 PDIDTEELPLARQVNDELQRDEQVDVGMNTDLLSVSDNFDDFRADKEAKLEEWLGGSGGL 240

Query: 241 NNLRDL 247
           N+++++
Sbjct: 241 NDVKEI 244

[Close]

BLAST of CsaV3_6G036730 vs. NCBI nr
Match: XP_022939806.1 (uncharacterized protein LOC111445573 isoform X1 [Cucurbita moschata] >XP_022939808.1 uncharacterized protein LOC111445573 isoform X1 [Cucurbita moschata] >XP_022939809.1 uncharacterized protein LOC111445573 isoform X1 [Cucurbita moschata])

HSP 1 Score: 399.8 bits (1026), Expect = 6.7e-108
Identity = 203/246 (82.52%), Postives = 224/246 (91.06%), Query Frame = 0


Query: 1   MIKYIANEPSTGLFYIQQHTKNAVPNVINLKNSVVHKSHETTLHTEDSEDSITMLRSMKE 60
           MIKYIANEPSTGLFYIQQHTKNAVPNVINLKNSVV KSHETTLH EDSEDSITML+SMK+
Sbjct: 20  MIKYIANEPSTGLFYIQQHTKNAVPNVINLKNSVVDKSHETTLHAEDSEDSITMLQSMKD 79

Query: 61  CGFPIADEMIRDIRKSLAIMSTKQPRRGLIHNTSGMQQQQPGRMSTWRSTSWGRRAIGAP 120
           CGFPIADEMIRDI+KSLA+MSTKQPRRGLI NTSG   QQPGRMSTWRS +WGR AI AP
Sbjct: 80  CGFPIADEMIRDIKKSLAVMSTKQPRRGLIRNTSG--TQQPGRMSTWRSATWGRSAIVAP 139

Query: 121 FNDDSGGYISTVFKSAREKASNFKWPQLDIKEDLAEVEVDKLQPQAIQPPVASTTSSSSQ 180
            +DDSGGYISTVFKSAREKASNFKWPQLDIKEDLA VEVD+L PQ  +PPVAS +S+SSQ
Sbjct: 140 RDDDSGGYISTVFKSAREKASNFKWPQLDIKEDLARVEVDELPPQPNEPPVASASSTSSQ 199

Query: 181 PDVDNEELPLSSQVNDQSQQDDMVDECLNTDLLSVSDNFDDFRADKEAKLEEWLGGSSGL 240
           PD+D EELPL+ QVND+ Q+D+ VD  +NTDLLSVSDNFDDFRADKEAKLEEWLGGS GL
Sbjct: 200 PDIDTEELPLARQVNDELQRDEQVDVGMNTDLLSVSDNFDDFRADKEAKLEEWLGGSGGL 259

Query: 241 NNLRDL 247
           N+++++
Sbjct: 260 NDVKEI 263

[Close]

BLAST of CsaV3_6G036730 vs. TAIR10
Match: AT2G39170.1 (unknown protein)

HSP 1 Score: 183.7 bits (465), Expect = 1.4e-46
Identity = 113/243 (46.50%), Postives = 146/243 (60.08%), Query Frame = 0


Query: 1   MIKYIANEPSTGLFYIQQHTKNAVPNVINLKNSVVHKSHETTLHTEDSEDSITMLRSMKE 60
           MIKYIANEPS GL+YIQQH +NA PNVINL N+V+ KS ET LHTED EDSI M++SMK+
Sbjct: 20  MIKYIANEPSVGLYYIQQHIRNAAPNVINLNNNVLEKSRETGLHTEDLEDSIAMVKSMKD 79

Query: 61  CGFPIADEMIRDIRKSLAIMSTKQPRRGLIHNTSGMQQQQPGRMSTW-RSTSWGRRAIG- 120
           CG PIADEMI DI+ SLAIMS+KQPRRG+I N++          S W RS+S   R  G 
Sbjct: 80  CGSPIADEMIGDIKNSLAIMSSKQPRRGVILNST----------SPWSRSSSITTRTRGS 139

Query: 121 --APFNDDSGGYISTVFKSAREKASNFKWPQLDIKEDLAEVEVDKLQPQAIQPPVASTTS 180
             +  N +S  Y ++VF +A+EKASN KWPQLD KE  +E +                  
Sbjct: 140 DNSQDNSESSNYFTSVFMTAKEKASNIKWPQLDFKEQKSEAD------------------ 199

Query: 181 SSSQPDVDNEELPLSSQVNDQSQQDDMVDECLNTDLLSVSDNFDDFRADKEAKLEEWLGG 240
               P+V + EL    +  D  + + +V+          +  F++F+A KEA L+ WLG 
Sbjct: 200 ----PNVQSNELK-EEEEEDSGKGEHIVE----------TTKFEEFKAGKEASLKAWLGD 219

[Close]

BLAST of CsaV3_6G036730 vs. TrEMBL
Match: tr|A0A0A0KE70|A0A0A0KE70_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G407090 PE=4 SV=1)

HSP 1 Score: 490.0 bits (1260), Expect = 3.3e-135
Identity = 249/249 (100.00%), Postives = 249/249 (100.00%), Query Frame = 0


Query: 1   MIKYIANEPSTGLFYIQQHTKNAVPNVINLKNSVVHKSHETTLHTEDSEDSITMLRSMKE 60
           MIKYIANEPSTGLFYIQQHTKNAVPNVINLKNSVVHKSHETTLHTEDSEDSITMLRSMKE
Sbjct: 20  MIKYIANEPSTGLFYIQQHTKNAVPNVINLKNSVVHKSHETTLHTEDSEDSITMLRSMKE 79

Query: 61  CGFPIADEMIRDIRKSLAIMSTKQPRRGLIHNTSGMQQQQPGRMSTWRSTSWGRRAIGAP 120
           CGFPIADEMIRDIRKSLAIMSTKQPRRGLIHNTSGMQQQQPGRMSTWRSTSWGRRAIGAP
Sbjct: 80  CGFPIADEMIRDIRKSLAIMSTKQPRRGLIHNTSGMQQQQPGRMSTWRSTSWGRRAIGAP 139

Query: 121 FNDDSGGYISTVFKSAREKASNFKWPQLDIKEDLAEVEVDKLQPQAIQPPVASTTSSSSQ 180
           FNDDSGGYISTVFKSAREKASNFKWPQLDIKEDLAEVEVDKLQPQAIQPPVASTTSSSSQ
Sbjct: 140 FNDDSGGYISTVFKSAREKASNFKWPQLDIKEDLAEVEVDKLQPQAIQPPVASTTSSSSQ 199

Query: 181 PDVDNEELPLSSQVNDQSQQDDMVDECLNTDLLSVSDNFDDFRADKEAKLEEWLGGSSGL 240
           PDVDNEELPLSSQVNDQSQQDDMVDECLNTDLLSVSDNFDDFRADKEAKLEEWLGGSSGL
Sbjct: 200 PDVDNEELPLSSQVNDQSQQDDMVDECLNTDLLSVSDNFDDFRADKEAKLEEWLGGSSGL 259

Query: 241 NNLRDLRAG 250
           NNLRDLRAG
Sbjct: 260 NNLRDLRAG 268

[Close]

BLAST of CsaV3_6G036730 vs. TrEMBL
Match: tr|A0A1S3C3G0|A0A1S3C3G0_CUCME (uncharacterized protein LOC103496452 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103496452 PE=4 SV=1)

HSP 1 Score: 472.6 bits (1215), Expect = 5.4e-130
Identity = 239/249 (95.98%), Postives = 245/249 (98.39%), Query Frame = 0


Query: 1   MIKYIANEPSTGLFYIQQHTKNAVPNVINLKNSVVHKSHETTLHTEDSEDSITMLRSMKE 60
           MIKYIANEPSTGLFYIQQHTKNAVPNVINLKNSVV KSHETTLHTEDSEDSI MLRSMKE
Sbjct: 20  MIKYIANEPSTGLFYIQQHTKNAVPNVINLKNSVVDKSHETTLHTEDSEDSIAMLRSMKE 79

Query: 61  CGFPIADEMIRDIRKSLAIMSTKQPRRGLIHNTSGMQQQQPGRMSTWRSTSWGRRAIGAP 120
           CGFPIADEMIRDIRKSLAIMSTKQPRRGLIHNTSGMQQQQPGRMSTWRS +WGRRAIGAP
Sbjct: 80  CGFPIADEMIRDIRKSLAIMSTKQPRRGLIHNTSGMQQQQPGRMSTWRSATWGRRAIGAP 139

Query: 121 FNDDSGGYISTVFKSAREKASNFKWPQLDIKEDLAEVEVDKLQPQAIQPPVASTTSSSSQ 180
           FNDDSGGYISTVFKSAREKASNFKWPQLDIKEDLA+VEVDKLQPQ+IQPPVASTTSSSSQ
Sbjct: 140 FNDDSGGYISTVFKSAREKASNFKWPQLDIKEDLADVEVDKLQPQSIQPPVASTTSSSSQ 199

Query: 181 PDVDNEELPLSSQVNDQSQQDDMVDECLNTDLLSVSDNFDDFRADKEAKLEEWLGGSSGL 240
           PD+DNEELPLSSQVND+SQQDD VDECLNTDLLSVSDNFDDFRADKEAKLEEWLGGSSGL
Sbjct: 200 PDMDNEELPLSSQVNDESQQDDRVDECLNTDLLSVSDNFDDFRADKEAKLEEWLGGSSGL 259

Query: 241 NNLRDLRAG 250
           N+LRDLRAG
Sbjct: 260 NDLRDLRAG 268

[Close]

BLAST of CsaV3_6G036730 vs. TrEMBL
Match: tr|A0A1S3C453|A0A1S3C453_CUCME (uncharacterized protein LOC103496452 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103496452 PE=4 SV=1)

HSP 1 Score: 472.6 bits (1215), Expect = 5.4e-130
Identity = 239/249 (95.98%), Postives = 245/249 (98.39%), Query Frame = 0


Query: 1   MIKYIANEPSTGLFYIQQHTKNAVPNVINLKNSVVHKSHETTLHTEDSEDSITMLRSMKE 60
           MIKYIANEPSTGLFYIQQHTKNAVPNVINLKNSVV KSHETTLHTEDSEDSI MLRSMKE
Sbjct: 1   MIKYIANEPSTGLFYIQQHTKNAVPNVINLKNSVVDKSHETTLHTEDSEDSIAMLRSMKE 60

Query: 61  CGFPIADEMIRDIRKSLAIMSTKQPRRGLIHNTSGMQQQQPGRMSTWRSTSWGRRAIGAP 120
           CGFPIADEMIRDIRKSLAIMSTKQPRRGLIHNTSGMQQQQPGRMSTWRS +WGRRAIGAP
Sbjct: 61  CGFPIADEMIRDIRKSLAIMSTKQPRRGLIHNTSGMQQQQPGRMSTWRSATWGRRAIGAP 120

Query: 121 FNDDSGGYISTVFKSAREKASNFKWPQLDIKEDLAEVEVDKLQPQAIQPPVASTTSSSSQ 180
           FNDDSGGYISTVFKSAREKASNFKWPQLDIKEDLA+VEVDKLQPQ+IQPPVASTTSSSSQ
Sbjct: 121 FNDDSGGYISTVFKSAREKASNFKWPQLDIKEDLADVEVDKLQPQSIQPPVASTTSSSSQ 180

Query: 181 PDVDNEELPLSSQVNDQSQQDDMVDECLNTDLLSVSDNFDDFRADKEAKLEEWLGGSSGL 240
           PD+DNEELPLSSQVND+SQQDD VDECLNTDLLSVSDNFDDFRADKEAKLEEWLGGSSGL
Sbjct: 181 PDMDNEELPLSSQVNDESQQDDRVDECLNTDLLSVSDNFDDFRADKEAKLEEWLGGSSGL 240

Query: 241 NNLRDLRAG 250
           N+LRDLRAG
Sbjct: 241 NDLRDLRAG 249

[Close]

BLAST of CsaV3_6G036730 vs. TrEMBL
Match: tr|A0A2N9F611|A0A2N9F611_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS14258 PE=4 SV=1)

HSP 1 Score: 279.6 bits (714), Expect = 6.7e-72
Identity = 154/249 (61.85%), Postives = 188/249 (75.50%), Query Frame = 0


Query: 1   MIKYIANEPSTGLFYIQQHTKNAVPNVINLKNSVVHKSHETTLHTEDSEDSITMLRSMKE 60
           MIKY+ANEPS GLFY+Q HT+NAVPNVI+LKN+VV KS ETTLHTEDSEDSITM+RSMKE
Sbjct: 20  MIKYVANEPSVGLFYVQHHTQNAVPNVISLKNNVVEKSRETTLHTEDSEDSITMVRSMKE 79

Query: 61  CGFPIADEMIRDIRKSLAIMSTKQPRRGLIHN-TSGMQQQQPGRMSTWRSTSWGRRAIG- 120
           CG PIADEMIRDI+KSL IMS KQPRRGLI N TSG Q    GR S+W   +WGR A+  
Sbjct: 80  CGLPIADEMIRDIKKSLVIMSKKQPRRGLIQNPTSGFQM---GRTSSWGPATWGRSAVSD 139

Query: 121 APFNDDSGGYISTVFKSAREKASNFKWPQLDIKEDLAEVEVDKLQPQAIQPPVASTTSSS 180
              N+  G YIS+VFKSA++KASNFKWPQLD KE +     + L        VAS ++SS
Sbjct: 140 QEDNERRGNYISSVFKSAKQKASNFKWPQLDPKESIQTKGEELLSIPTPSVSVASASTSS 199

Query: 181 SQPDVDNEELPLSSQVNDQS-QQDDMVDECL-NTDLLSVSDNFDDFRADKEAKLEEWLGG 240
           S PD++ +ELPLSS++ D   Q+++  D  L +T++  VS+NFDDF+A+KEAKLEEWLGG
Sbjct: 200 SLPDMEADELPLSSRIEDDPLQEEEQSDVSLPSTNVFLVSENFDDFKANKEAKLEEWLGG 259

Query: 241 SSGLNNLRD 246
           +  L N +D
Sbjct: 260 NDNLGNHKD 265

[Close]

BLAST of CsaV3_6G036730 vs. TrEMBL
Match: tr|M5X3F9|M5X3F9_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G208500 PE=4 SV=1)

HSP 1 Score: 271.2 bits (692), Expect = 2.4e-69
Identity = 150/252 (59.52%), Postives = 182/252 (72.22%), Query Frame = 0


Query: 1   MIKYIANEPSTGLFYIQQHTKNAVPNVINLKNSVVHKSHETTLHTEDSEDSITMLRSMKE 60
           MIKY+ANEPS GLFYIQQHT+NAVPN+++L+N++V KS ETTLHTEDSEDSI M+RSMKE
Sbjct: 20  MIKYVANEPSVGLFYIQQHTQNAVPNLVSLRNTIVDKSRETTLHTEDSEDSIAMVRSMKE 79

Query: 61  CGFPIADEMIRDIRKSLAIMSTKQPRRGLIHNTSGMQQQQPGRMSTWRSTSWGRRAIGAP 120
           CGFPIADEMIRDI+KSLA+MSTKQP+RGLI N +   Q   GR S+W+  SW R    A 
Sbjct: 80  CGFPIADEMIRDIKKSLAVMSTKQPKRGLIDNQTSSFQM--GRTSSWKPASWVRSPSVAQ 139

Query: 121 FNDDSGGYISTVFKSAREKASNFKWPQLDIKEDLAEVEVDKLQPQAIQP----PVASTTS 180
             D   GYISTV KSAR+KASNFKWP LD KE            QA  P     VAS ++
Sbjct: 140 -QDTESGYISTVIKSARQKASNFKWPPLDSKE----------LTQASYPNPTLSVASVST 199

Query: 181 SSSQPDVDNEELPLSSQVNDQSQQDDMVDECLNTDLLSVSDNFDDFRADKEAKLEEWLGG 240
           SSS PDV+ EELP+SS V D+ Q+D + D  L  +LL + +NFD+F+ADKE KL+EWL G
Sbjct: 200 SSSLPDVEAEELPVSSHVADEQQEDQVDDSLLTHNLLPMEENFDEFKADKELKLQEWLEG 258

Query: 241 SSGLNNLRDLRA 249
           +  ++N R   A
Sbjct: 260 TGNVDNHRGASA 258

The following BLAST results are available for this feature:

BLAST of CsaV3_6G036730 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011657506.1	4.9e-135	100.00	PREDICTED: uncharacterized protein LOC101218921 [Cucumis sativus] >XP_011657507....	[more]
XP_008456524.1	8.1e-130	95.98	PREDICTED: uncharacterized protein LOC103496452 isoform X1 [Cucumis melo] >XP_00...	[more]
XP_008456526.1	8.1e-130	95.98	PREDICTED: uncharacterized protein LOC103496452 isoform X2 [Cucumis melo]	[more]
XP_022939810.1	6.7e-108	82.52	uncharacterized protein LOC111445573 isoform X2 [Cucurbita moschata]	[more]
XP_022939806.1	6.7e-108	82.52	uncharacterized protein LOC111445573 isoform X1 [Cucurbita moschata] >XP_0229398...	[more]

BLAST of CsaV3_6G036730 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G39170.1	1.4e-46	46.50	unknown protein	[more]

BLAST of CsaV3_6G036730 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CsaV3_6G036730 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KE70\|A0A0A0KE70_CUCSA	3.3e-135	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G407090 PE=4 SV=1	[more]
tr\|A0A1S3C3G0\|A0A1S3C3G0_CUCME	5.4e-130	95.98	uncharacterized protein LOC103496452 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A1S3C453\|A0A1S3C453_CUCME	5.4e-130	95.98	uncharacterized protein LOC103496452 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A2N9F611\|A0A2N9F611_FAGSY	6.7e-72	61.85	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS14258 PE=4 SV=1	[more]
tr\|M5X3F9\|M5X3F9_PRUPE	2.4e-69	59.52	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G208500 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR019320	BORCS8

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_6G036730.1	CsaV3_6G036730.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019320	BLOC-1-related complex subunit 8	PFAM	PF10167	BORCS8	coord: 1..91 e-value: 6.9E-24 score: 83.9
IPR019320	BLOC-1-related complex subunit 8	PANTHER	PTHR21146	MEF2B PROTEIN	coord: 1..239
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 167..201
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 162..201

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_6G036730	CSPI06G21650	Wild cucumber (PI 183967)	cpicucB363
CsaV3_6G036730	Cucsa.137420	Cucumber (Gy14) v1	cgycucB205
CsaV3_6G036730	CmaCh15G005040	Cucurbita maxima (Rimu)	cmacucB0368
CsaV3_6G036730	CmaCh04G025540	Cucurbita maxima (Rimu)	cmacucB0909
CsaV3_6G036730	CmoCh15G005130	Cucurbita moschata (Rifu)	cmocucB0366
CsaV3_6G036730	CmoCh04G026730	Cucurbita moschata (Rifu)	cmocucB0901
CsaV3_6G036730	Cp4.1LG13g10240	Cucurbita pepo (Zucchini)	cpecucB0235
CsaV3_6G036730	Cp4.1LG01g24680	Cucurbita pepo (Zucchini)	cpecucB0571
CsaV3_6G036730	CsGy6G020930	Cucumber (Gy14) v2	cgybcucB298
CsaV3_6G036730	Carg04580	Silver-seed gourd	carcucB0727
CsaV3_6G036730	Carg01692	Silver-seed gourd	carcucB0872
CsaV3_6G036730	Cla013744	Watermelon (97103) v1	cucwmB483
CsaV3_6G036730	MELO3C019827	Melon (DHL92) v3.5.1	cucmeB485
CsaV3_6G036730	ClCG08G007740	Watermelon (Charleston Gray)	cucwcgB516
CsaV3_6G036730	MELO3C019827.2	Melon (DHL92) v3.6.1	cucmedB475
CsaV3_6G036730	Cla97C08G150510	Watermelon (97103) v2	cucwmbB507
CsaV3_6G036730	Bhi04G001063	Wax gourd	cucwgoB610

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_6G036730	Wax gourd	cucwgoB585