CsaV3_6G036000 (gene) Cucumber (Chinese Long) v3

NameCsaV3_6G036000
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr6 : 19947552 .. 19947728 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGTCTAGGGCAGGGGCTAGAAGTCGATTCTTCCCCGTCTGCTCTCGTCTCTCTTCCTCTCGACCAATGGATCCTGGACCTGCGCTCGTATTCTTTCGCTTTCTTGCCGCGATTTTATTTGCCATCCGGTTCGGCTACGGATCGATTCTTCCCCGGTTTGGAAACGGTTGGTGA

mRNA sequence

ATGGAGTCTAGGGCAGGGGCTAGAAGTCGATTCTTCCCCGTCTGCTCTCGTCTCTCTTCCTCTCGACCAATGGATCCTGGACCTGCGCTCGTATTCTTTCGCTTTCTTGCCGCGATTTTATTTGCCATCCGGTTCGGCTACGGATCGATTCTTCCCCGGTTTGGAAACGGTTGGTGA

Coding sequence (CDS)

ATGGAGTCTAGGGCAGGGGCTAGAAGTCGATTCTTCCCCGTCTGCTCTCGTCTCTCTTCCTCTCGACCAATGGATCCTGGACCTGCGCTCGTATTCTTTCGCTTTCTTGCCGCGATTTTATTTGCCATCCGGTTCGGCTACGGATCGATTCTTCCCCGGTTTGGAAACGGTTGGTGA

Protein sequence

MESRAGARSRFFPVCSRLSSSRPMDPGPALVFFRFLAAILFAIRFGYGSILPRFGNGW
BLAST of CsaV3_6G036000 vs. NCBI nr
Match: KGN47781.1 (hypothetical protein Csa_6G401510 [Cucumis sativus])

HSP 1 Score: 122.1 bits (305), Expect = 6.4e-25
Identity = 58/58 (100.00%), Postives = 58/58 (100.00%), Query Frame = 0

Query: 1  MESRAGARSRFFPVCSRLSSSRPMDPGPALVFFRFLAAILFAIRFGYGSILPRFGNGW 59
          MESRAGARSRFFPVCSRLSSSRPMDPGPALVFFRFLAAILFAIRFGYGSILPRFGNGW
Sbjct: 1  MESRAGARSRFFPVCSRLSSSRPMDPGPALVFFRFLAAILFAIRFGYGSILPRFGNGW 58

BLAST of CsaV3_6G036000 vs. TrEMBL
Match: tr|A0A0A0KJ19|A0A0A0KJ19_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G401510 PE=4 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 4.2e-25
Identity = 58/58 (100.00%), Postives = 58/58 (100.00%), Query Frame = 0

Query: 1  MESRAGARSRFFPVCSRLSSSRPMDPGPALVFFRFLAAILFAIRFGYGSILPRFGNGW 59
          MESRAGARSRFFPVCSRLSSSRPMDPGPALVFFRFLAAILFAIRFGYGSILPRFGNGW
Sbjct: 1  MESRAGARSRFFPVCSRLSSSRPMDPGPALVFFRFLAAILFAIRFGYGSILPRFGNGW 58

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KGN47781.16.4e-25100.00hypothetical protein Csa_6G401510 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A0A0KJ19|A0A0A0KJ19_CUCSA4.2e-25100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G401510 PE=4 SV=1[more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_6G036000.1CsaV3_6G036000.1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None