CsaV3_6G032160 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_6G032160
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
Description30S ribosomal protein S14, chloroplastic
Locationchr6 : 18211007 .. 18211525 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAAAAGGTAAGATCTATAGTTTTCTAATTTGGAGATTGTGGAGGAACTTATTGTAATTTTGAAGTATTTTGATAACGTGAACTACATCTCTTGTTTGTGAGTTTTAGTTTGGATACATTTAAATATTGATCGGCTTCCCATGCTTAGACCGCATAGTTTGATGGTTTAGGTTAACATATATAATACATGGCATATAGTTATAGGTTAGTCTCTAAGAAAAGCGATAGACCACCTTTTGATTCAAAGGGAGAAGAGGCAAAAATTGGAACAAAAATATCATTTGATTCGTCAATCCTTAAAAAACGAAATCGTTGAGTGAGAAATGGAAAATTCATGGAAAGTTACAATCCCCACCGCGTAATAGTGCACCCACACGTCTTCATCGATGTTTTTTAACCGGAAGACCGAGAGCAAACTATCAAGACCTTGGGTTCTCTGGACACATACTTCGTGAAATGGTTCATGCATGCTTGTTGCTTGGGATGACAATGAAGAATATTATTCTATTGTTCTAA

mRNA sequence

ATGGAAAAAGCGATAGACCACCTTTTGATTCAAAGGGAGAAGAGGCAAAAATTGGAACAAAAATATCATTTGATTCGTCAATCCTTAAAAAACGAAATCGTTGATGCACCCACACGTCTTCATCGATGTTTTTTAACCGGAAGACCGAGAGCAAACTATCAAGACCTTGGGTTCTCTGGACACATACTTCGTGAAATGGTTCATGCATGCTTGTTGCTTGGGATGACAATGAAGAATATTATTCTATTGTTCTAA

Coding sequence (CDS)

ATGGAAAAAGCGATAGACCACCTTTTGATTCAAAGGGAGAAGAGGCAAAAATTGGAACAAAAATATCATTTGATTCGTCAATCCTTAAAAAACGAAATCGTTGATGCACCCACACGTCTTCATCGATGTTTTTTAACCGGAAGACCGAGAGCAAACTATCAAGACCTTGGGTTCTCTGGACACATACTTCGTGAAATGGTTCATGCATGCTTGTTGCTTGGGATGACAATGAAGAATATTATTCTATTGTTCTAA

Protein sequence

MEKAIDHLLIQREKRQKLEQKYHLIRQSLKNEIVDAPTRLHRCFLTGRPRANYQDLGFSGHILREMVHACLLLGMTMKNIILLF
Homology
[Close]
BLAST of CsaV3_6G032160 vs. NCBI nr
Match: KGN47606.1 (hypothetical protein Csa_6G364110 [Cucumis sativus])

HSP 1 Score: 168.7 bits (426), Expect = 8.5e-39
Identity = 84/84 (100.00%), Postives = 84/84 (100.00%), Query Frame = 0 

Query: 1  MEKAIDHLLIQREKRQKLEQKYHLIRQSLKNEIVDAPTRLHRCFLTGRPRANYQDLGFSG 60
          MEKAIDHLLIQREKRQKLEQKYHLIRQSLKNEIVDAPTRLHRCFLTGRPRANYQDLGFSG
Sbjct: 1  MEKAIDHLLIQREKRQKLEQKYHLIRQSLKNEIVDAPTRLHRCFLTGRPRANYQDLGFSG 60

Query: 61 HILREMVHACLLLGMTMKNIILLF 85
          HILREMVHACLLLGMTMKNIILLF
Sbjct: 61 HILREMVHACLLLGMTMKNIILLF 84

[Close]
BLAST of CsaV3_6G032160 vs. NCBI nr
Match: YP_247597.1 (ribosomal protein S14 [Cucumis sativus] >YP_009004042.1 ribosomal protein S14 [Cucumis hystrix] >YP_009346483.1 ribosomal protein S14 (chloroplast) [Cucumis x hytivus] >Q4VZN5.1 RecName: Full=30S ribosomal protein S14, chloroplastic >AAO38177.1 ribosomal protein S14 (chloroplast) [Cucumis sativus] >CAJ00756.1 ribosomal protein S14 (chloroplast) [Cucumis sativus] >AAZ94649.1 ribosomal protein S14 (chloroplast) [Cucumis sativus] >ABI97415.1 ribosomal protein S14 (chloroplast) [Cucumis sativus] >ABI98744.1 ribosomal protein S14 (chloroplast) [Cucumis sativus] >AHJ61384.1 ribosomal protein S14 (plastid) [Cucumis hystrix] >ALF03299.1 ribosomal protein S14 (chloroplast) [Cucumis sativus var. hardwickii] >ANF28375.1 ribosomal protein S14 (chloroplast) [Cucumis sativus var. hardwickii] >AOW71093.1 ribosomal protein S14 (chloroplast) [Cucumis x hytivus] >ARQ16076.1 ribosomal protein S14 (chloroplast) [Cucumis sativus] >ARQ16159.1 ribosomal protein S14 (chloroplast) [Cucumis sativus] >ARQ16242.1 ribosomal protein S14 (chloroplast) [Cucumis sativus] >ARQ16325.1 ribosomal protein S14 (chloroplast) [Cucumis sativus] >ASY97504.1 ribosomal protein S14 (chloroplast) [Cucumis sativus var. hardwickii] >AVE15329.1 ribosomal protein S14 (chloroplast) [Cucumis sativus var. sativus])

HSP 1 Score: 103.6 bits (257), Expect = 3.4e-19
Identity = 61/91 (67.03%), Postives = 62/91 (68.13%), Query Frame = 0 

Query: 9  LIQRE-KRQKLEQKYHLIRQSLKNEIV---------------------DAPTRLH-RCFL 68
          LIQRE KRQKLEQKYHLIRQSLKNEI                       APTRLH RCFL
Sbjct: 6  LIQREKKRQKLEQKYHLIRQSLKNEISKVPSLSEKWEIHGKLQSPPRNSAPTRLHRRCFL 65

Query: 69 TGRPRANYQDLGFSGHILREMVHACLLLGMT 77
          TGRPRANY+D G SGHILREMVHACLL G T
Sbjct: 66 TGRPRANYRDFGLSGHILREMVHACLLPGAT 96

[Close]
BLAST of CsaV3_6G032160 vs. NCBI nr
Match: AEX65502.1 (30S ribosomal protein S14, partial (chloroplast) [Anredera baselloides])

HSP 1 Score: 99.8 bits (247), Expect = 4.9e-18
Identity = 59/91 (64.84%), Postives = 61/91 (67.03%), Query Frame = 0 

Query: 9  LIQRE-KRQKLEQKYHLIRQSLKNEIV---------------------DAPTRLH-RCFL 68
          LIQRE KRQKLEQKYHLIR+S KNEI                       APTRLH RCFL
Sbjct: 6  LIQREKKRQKLEQKYHLIRRSSKNEISKVASLSDKWEIHGKLQSSPRNSAPTRLHRRCFL 65

Query: 69 TGRPRANYQDLGFSGHILREMVHACLLLGMT 77
          TGRPRANY+D G SGHILREMVHACLL G T
Sbjct: 66 TGRPRANYRDFGLSGHILREMVHACLLPGAT 96

[Close]
BLAST of CsaV3_6G032160 vs. NCBI nr
Match: YP_009441438.1 (ribosomal protein S14 (chloroplast) [Portulaca oleracea] >YP_009485792.1 ribosomal protein S14 (chloroplast) [Talinum paniculatum] >AEX65504.1 30S ribosomal protein S14, partial (chloroplast) [Didierea madagascariensis] >AEX65510.1 30S ribosomal protein S14, partial (chloroplast) [Portulaca oleracea] >ATN40580.1 ribosomal protein S14 (chloroplast) [Portulaca oleracea] >AVZ66361.1 ribosomal protein S14 (chloroplast) [Talinum paniculatum])

HSP 1 Score: 99.8 bits (247), Expect = 4.9e-18
Identity = 59/91 (64.84%), Postives = 61/91 (67.03%), Query Frame = 0 

Query: 9  LIQRE-KRQKLEQKYHLIRQSLKNEIV---------------------DAPTRLH-RCFL 68
          LIQRE KRQKLEQKYHLIR+S KNEI                       APTRLH RCFL
Sbjct: 6  LIQREKKRQKLEQKYHLIRRSSKNEISKVASLSDKWEIHGKLQSPPRNSAPTRLHRRCFL 65

Query: 69 TGRPRANYQDLGFSGHILREMVHACLLLGMT 77
          TGRPRANY+D G SGHILREMVHACLL G T
Sbjct: 66 TGRPRANYRDFGLSGHILREMVHACLLPGAT 96

[Close]
BLAST of CsaV3_6G032160 vs. NCBI nr
Match: YP_009317384.1 (ribosomal protein S14 (chloroplast) [Coccinia grandis] >YP_009325987.1 ribosomal protein S14 (chloroplast) [Citrullus lanatus] >YP_009348029.1 ribosomal protein S14 (plastid) [Citrullus mucosospermus] >YP_009420792.1 ribosomal protein S14 (chloroplast) [Citrullus colocynthis] >YP_009431555.1 ribosomal protein S14 (chloroplast) [Citrullus amarus] >YP_009431640.1 ribosomal protein S14 (chloroplast) [Citrullus rehmii] >YP_009456144.1 ribosomal protein S14 (chloroplast) [Lagenaria siceraria] >AHM89066.1 ribosomal protein S14 (chloroplast) [Lagenaria siceraria] >AHM89125.1 ribosomal protein S14 (chloroplast) [Lagenaria siceraria] >AHM89184.1 ribosomal protein S14 (chloroplast) [Lagenaria siceraria] >AHM89362.1 ribosomal protein S14 (chloroplast) [Lagenaria siceraria] >AHM89480.1 ribosomal protein S14 (chloroplast) [Lagenaria siceraria] >AHM89599.1 ribosomal protein S14 (chloroplast) [Lagenaria siceraria] >AHM89658.1 ribosomal protein S14 (chloroplast) [Lagenaria siceraria] >AHM89717.1 ribosomal protein S14 (chloroplast) [Lagenaria siceraria] >AHM89776.1 ribosomal protein S14 (chloroplast) [Lagenaria siceraria] >AHM89835.1 ribosomal protein S14 (chloroplast) [Lagenaria siceraria] >AHM89894.1 ribosomal protein S14 (chloroplast) [Lagenaria siceraria] >AHM89953.1 ribosomal protein S14 (chloroplast) [Lagenaria siceraria] >AHM90071.1 ribosomal protein S14 (chloroplast) [Lagenaria siceraria] >AHM90130.1 ribosomal protein S14 (chloroplast) [Lagenaria siceraria] >AHM90189.1 ribosomal protein S14 (chloroplast) [Lagenaria siceraria] >AHM90366.1 ribosomal protein S14 (chloroplast) [Lagenaria siceraria] >AHM90484.1 ribosomal protein S14 (chloroplast) [Lagenaria siceraria] >AHM90543.1 ribosomal protein S14 (chloroplast) [Lagenaria siceraria] >AHM90602.1 ribosomal protein S14 (chloroplast) [Lagenaria siceraria] >AHM90720.1 ribosomal protein S14 (chloroplast) [Lagenaria siceraria] >AHM90779.1 ribosomal protein S14 (chloroplast) [Lagenaria siceraria] >AHM90838.1 ribosomal protein S14 (chloroplast) [Lagenaria siceraria] >AHM90897.1 ribosomal protein S14 (chloroplast) [Lagenaria siceraria] >AHM90956.1 ribosomal protein S14 (chloroplast) [Lagenaria siceraria] >AOX48768.1 ribosomal protein S14 (chloroplast) [Coccinia grandis] >AOX48853.1 ribosomal protein S14 (chloroplast) [Coccinia grandis] >APD52478.1 ribosomal protein S14 (chloroplast) [Citrullus lanatus] >APW82459.1 ribosomal protein S14 (plastid) [Citrullus lanatus subsp. vulgaris] >APW82544.1 ribosomal protein S14 (plastid) [Citrullus lanatus subsp. vulgaris] >APW82629.1 ribosomal protein S14 (plastid) [Citrullus lanatus subsp. vulgaris] >APW82714.1 ribosomal protein S14 (plastid) [Citrullus mucosospermus] >APW82799.1 ribosomal protein S14 (plastid) [Citrullus mucosospermus] >APW82884.1 ribosomal protein S14 (plastid) [Citrullus lanatus subsp. vulgaris] >APW82969.1 ribosomal protein S14 (plastid) [Citrullus lanatus subsp. vulgaris] >APW83054.1 ribosomal protein S14 (plastid) [Citrullus lanatus subsp. vulgaris] >APW83139.1 ribosomal protein S14 (plastid) [Citrullus lanatus subsp. vulgaris] >APW83224.1 ribosomal protein S14 (plastid) [Citrullus lanatus subsp. vulgaris] >APW83309.1 ribosomal protein S14 (plastid) [Citrullus mucosospermus] >ASP44511.1 ribosomal protein S14 (chloroplast) [Citrullus colocynthis] >ASY96203.1 ribosomal protein S14 (chloroplast) [Citrullus amarus] >ASY96292.1 ribosomal protein S14 (chloroplast) [Citrullus rehmii] >AUJ21910.1 ribosomal protein S14 (chloroplast) [Lagenaria siceraria] >AXR94574.1 ribosomal protein S14 (chloroplast) [Hodgsonia macrocarpa] >AXR94660.1 ribosomal protein S14 (chloroplast) [Hodgsonia macrocarpa] >AXR94743.1 ribosomal protein S14 (chloroplast) [Hodgsonia macrocarpa] >AXR94829.1 ribosomal protein S14 (chloroplast) [Hodgsonia macrocarpa])

HSP 1 Score: 99.8 bits (247), Expect = 4.9e-18
Identity = 59/91 (64.84%), Postives = 61/91 (67.03%), Query Frame = 0 

Query: 9  LIQRE-KRQKLEQKYHLIRQSLKNEIV---------------------DAPTRLH-RCFL 68
          LIQRE KRQKLEQKYHLIR+SLK EI                       APTRLH RCFL
Sbjct: 6  LIQREKKRQKLEQKYHLIRRSLKKEISKVPSLSEKWEIHGKLQSPPRNSAPTRLHRRCFL 65

Query: 69 TGRPRANYQDLGFSGHILREMVHACLLLGMT 77
          TGRPRANY+D G SGHILREMVHACLL G T
Sbjct: 66 TGRPRANYRDFGLSGHILREMVHACLLPGAT 96

[Close]
BLAST of CsaV3_6G032160 vs. TAIR10
Match: ATCG00330.1 (chloroplast ribosomal protein S14)

HSP 1 Score: 89.0 bits (219), Expect = 1.6e-18
Identity = 51/91 (56.04%), Postives = 57/91 (62.64%), Query Frame = 0 

Query: 8  LLIQREKRQKLEQKYHLIRQSLKNEIV---------------------DAPTRLH-RCFL 67
          L+ + +KRQKLE+KYHLIR+S K EI                       APTRLH RCF 
Sbjct: 6  LIYREKKRQKLEKKYHLIRRSSKKEISKIPSLSEKWKIHGKLQSPPRNSAPTRLHRRCFS 65

Query: 68 TGRPRANYQDLGFSGHILREMVHACLLLGMT 77
          TGRPRANY+D G SGHILREMV ACLL G T
Sbjct: 66 TGRPRANYRDFGLSGHILREMVQACLLPGAT 96

[Close]
BLAST of CsaV3_6G032160 vs. Swiss-Prot
Match: sp|Q4VZN5|RR14_CUCSA (30S ribosomal protein S14, chloroplastic OS=Cucumis sativus OX=3659 GN=rps14 PE=3 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 1.1e-21
Identity = 61/91 (67.03%), Postives = 62/91 (68.13%), Query Frame = 0 

Query: 9  LIQRE-KRQKLEQKYHLIRQSLKNEIV---------------------DAPTRLH-RCFL 68
          LIQRE KRQKLEQKYHLIRQSLKNEI                       APTRLH RCFL
Sbjct: 6  LIQREKKRQKLEQKYHLIRQSLKNEISKVPSLSEKWEIHGKLQSPPRNSAPTRLHRRCFL 65

Query: 69 TGRPRANYQDLGFSGHILREMVHACLLLGMT 77
          TGRPRANY+D G SGHILREMVHACLL G T
Sbjct: 66 TGRPRANYRDFGLSGHILREMVHACLLPGAT 96

[Close]
BLAST of CsaV3_6G032160 vs. Swiss-Prot
Match: sp|B2XWK3|RR14_FAGEA (30S ribosomal protein S14, chloroplastic OS=Fagopyrum esculentum subsp. ancestrale OX=180217 GN=rps14 PE=3 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 1.3e-19
Identity = 57/91 (62.64%), Postives = 60/91 (65.93%), Query Frame = 0 

Query: 9  LIQRE-KRQKLEQKYHLIRQSLKNEIV---------------------DAPTRLH-RCFL 68
          LIQRE KR+KLEQKYHLIR+SLK EI                       APTRLH RCFL
Sbjct: 6  LIQREQKRKKLEQKYHLIRRSLKKEISKVTSLNEKWEIHGKLQSPPRNSAPTRLHRRCFL 65

Query: 69 TGRPRANYQDLGFSGHILREMVHACLLLGMT 77
          TGRPRANY+D G SGHILREMVH CLL G T
Sbjct: 66 TGRPRANYRDFGLSGHILREMVHTCLLPGAT 96

[Close]
BLAST of CsaV3_6G032160 vs. Swiss-Prot
Match: sp|Q8S8X6|RR14_ATRBE (30S ribosomal protein S14, chloroplastic OS=Atropa belladonna OX=33113 GN=rps14 PE=3 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 3.9e-19
Identity = 57/91 (62.64%), Postives = 59/91 (64.84%), Query Frame = 0 

Query: 9  LIQRE-KRQKLEQKYHLIRQSLKNEIV---------------------DAPTRLH-RCFL 68
          LIQRE KRQKLEQKYH IR+S K EI                       APTRLH RCFL
Sbjct: 6  LIQREKKRQKLEQKYHSIRRSSKKEISKVPSLSDKWEIYGKLQSLPRNSAPTRLHRRCFL 65

Query: 69 TGRPRANYQDLGFSGHILREMVHACLLLGMT 77
          TGRPRANY+D G SGHILREMVHACLL G T
Sbjct: 66 TGRPRANYRDFGLSGHILREMVHACLLPGAT 96

[Close]
BLAST of CsaV3_6G032160 vs. Swiss-Prot
Match: sp|Q09MI0|RR14_CITSI (30S ribosomal protein S14, chloroplastic OS=Citrus sinensis OX=2711 GN=rps14 PE=3 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 3.9e-19
Identity = 57/91 (62.64%), Postives = 59/91 (64.84%), Query Frame = 0 

Query: 9  LIQRE-KRQKLEQKYHLIRQSLKNEI---------------------VDAPTRLH-RCFL 68
          LIQRE KR KLEQKYHLIR+S K EI                       APTRLH RCFL
Sbjct: 6  LIQREKKRHKLEQKYHLIRRSSKKEINKAPSLSDKWKIHGKLQSSPRNSAPTRLHRRCFL 65

Query: 69 TGRPRANYQDLGFSGHILREMVHACLLLGMT 77
          TGRPRANY+D G SGHILREMVHACLL G T
Sbjct: 66 TGRPRANYRDFGLSGHILREMVHACLLPGAT 96

[Close]
BLAST of CsaV3_6G032160 vs. Swiss-Prot
Match: sp|Q49L00|RR14_EUCGG (30S ribosomal protein S14, chloroplastic OS=Eucalyptus globulus subsp. globulus OX=71271 GN=rps14 PE=3 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 3.9e-19
Identity = 57/91 (62.64%), Postives = 59/91 (64.84%), Query Frame = 0 

Query: 9  LIQRE-KRQKLEQKYHLIRQSLKNEIV---------------------DAPTRLH-RCFL 68
          LIQRE KRQKLEQKYHLIR+S K EI                       APTRLH RCF 
Sbjct: 6  LIQREKKRQKLEQKYHLIRRSSKKEISKVPSLSEKWKIHGKLQSSPRNSAPTRLHRRCFS 65

Query: 69 TGRPRANYQDLGFSGHILREMVHACLLLGMT 77
          TGRPRANY+D G SGHILREMVHACLL G T
Sbjct: 66 TGRPRANYRDFGLSGHILREMVHACLLPGAT 96

[Close]
BLAST of CsaV3_6G032160 vs. TrEMBL
Match: tr|A0A0A0KIM2|A0A0A0KIM2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G364110 PE=4 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 5.7e-39
Identity = 84/84 (100.00%), Postives = 84/84 (100.00%), Query Frame = 0 

Query: 1  MEKAIDHLLIQREKRQKLEQKYHLIRQSLKNEIVDAPTRLHRCFLTGRPRANYQDLGFSG 60
          MEKAIDHLLIQREKRQKLEQKYHLIRQSLKNEIVDAPTRLHRCFLTGRPRANYQDLGFSG
Sbjct: 1  MEKAIDHLLIQREKRQKLEQKYHLIRQSLKNEIVDAPTRLHRCFLTGRPRANYQDLGFSG 60

Query: 61 HILREMVHACLLLGMTMKNIILLF 85
          HILREMVHACLLLGMTMKNIILLF
Sbjct: 61 HILREMVHACLLLGMTMKNIILLF 84

[Close]
BLAST of CsaV3_6G032160 vs. TrEMBL
Match: tr|A0A218KG37|A0A218KG37_CUCSA (30S ribosomal protein S14, chloroplastic OS=Cucumis sativus var. hardwickii OX=319220 GN=rps14 PE=3 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 2.2e-19
Identity = 61/91 (67.03%), Postives = 62/91 (68.13%), Query Frame = 0 

Query: 9  LIQRE-KRQKLEQKYHLIRQSLKNEIV---------------------DAPTRLH-RCFL 68
          LIQRE KRQKLEQKYHLIRQSLKNEI                       APTRLH RCFL
Sbjct: 6  LIQREKKRQKLEQKYHLIRQSLKNEISKVPSLSEKWEIHGKLQSPPRNSAPTRLHRRCFL 65

Query: 69 TGRPRANYQDLGFSGHILREMVHACLLLGMT 77
          TGRPRANY+D G SGHILREMVHACLL G T
Sbjct: 66 TGRPRANYRDFGLSGHILREMVHACLLPGAT 96

[Close]
BLAST of CsaV3_6G032160 vs. TrEMBL
Match: tr|A0A1X9Q1T3|A0A1X9Q1T3_CUCSA (30S ribosomal protein S14, chloroplastic OS=Cucumis sativus OX=3659 GN=rps14 PE=3 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 2.2e-19
Identity = 61/91 (67.03%), Postives = 62/91 (68.13%), Query Frame = 0 

Query: 9  LIQRE-KRQKLEQKYHLIRQSLKNEIV---------------------DAPTRLH-RCFL 68
          LIQRE KRQKLEQKYHLIRQSLKNEI                       APTRLH RCFL
Sbjct: 6  LIQREKKRQKLEQKYHLIRQSLKNEISKVPSLSEKWEIHGKLQSPPRNSAPTRLHRRCFL 65

Query: 69 TGRPRANYQDLGFSGHILREMVHACLLLGMT 77
          TGRPRANY+D G SGHILREMVHACLL G T
Sbjct: 66 TGRPRANYRDFGLSGHILREMVHACLLPGAT 96

[Close]
BLAST of CsaV3_6G032160 vs. TrEMBL
Match: tr|A0A1P8C7R9|A0A1P8C7R9_9ROSI (30S ribosomal protein S14, chloroplastic OS=Cucumis x hytivus OX=442738 GN=46791 PE=3 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 2.2e-19
Identity = 61/91 (67.03%), Postives = 62/91 (68.13%), Query Frame = 0 

Query: 9  LIQRE-KRQKLEQKYHLIRQSLKNEIV---------------------DAPTRLH-RCFL 68
          LIQRE KRQKLEQKYHLIRQSLKNEI                       APTRLH RCFL
Sbjct: 6  LIQREKKRQKLEQKYHLIRQSLKNEISKVPSLSEKWEIHGKLQSPPRNSAPTRLHRRCFL 65

Query: 69 TGRPRANYQDLGFSGHILREMVHACLLLGMT 77
          TGRPRANY+D G SGHILREMVHACLL G T
Sbjct: 66 TGRPRANYRDFGLSGHILREMVHACLLPGAT 96

[Close]
BLAST of CsaV3_6G032160 vs. TrEMBL
Match: tr|W8E1Z5|W8E1Z5_9ROSI (Ribosomal protein S14 OS=Cucumis hystrix OX=396994 GN=rps14 PE=3 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 2.2e-19
Identity = 61/91 (67.03%), Postives = 62/91 (68.13%), Query Frame = 0 

Query: 9  LIQRE-KRQKLEQKYHLIRQSLKNEIV---------------------DAPTRLH-RCFL 68
          LIQRE KRQKLEQKYHLIRQSLKNEI                       APTRLH RCFL
Sbjct: 6  LIQREKKRQKLEQKYHLIRQSLKNEISKVPSLSEKWEIHGKLQSPPRNSAPTRLHRRCFL 65

Query: 69 TGRPRANYQDLGFSGHILREMVHACLLLGMT 77
          TGRPRANY+D G SGHILREMVHACLL G T
Sbjct: 66 TGRPRANYRDFGLSGHILREMVHACLLPGAT 96

The following BLAST results are available for this feature:
BLAST of CsaV3_6G032160 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN47606.18.5e-39100.00hypothetical protein Csa_6G364110 [Cucumis sativus][more]
YP_247597.13.4e-1967.03ribosomal protein S14 [Cucumis sativus] >YP_009004042.1 ribosomal protein S14 [C... [more]
AEX65502.14.9e-1864.8430S ribosomal protein S14, partial (chloroplast) [Anredera baselloides][more]
YP_009441438.14.9e-1864.84ribosomal protein S14 (chloroplast) [Portulaca oleracea] >YP_009485792.1 ribosom... [more]
YP_009317384.14.9e-1864.84ribosomal protein S14 (chloroplast) [Coccinia grandis] >YP_009325987.1 ribosomal... [more]
BLAST of CsaV3_6G032160 vs. TAIR10
Match NameE-valueIdentityDescription
ATCG00330.11.6e-1856.04chloroplast ribosomal protein S14[more]
BLAST of CsaV3_6G032160 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q4VZN5|RR14_CUCSA1.1e-2167.0330S ribosomal protein S14, chloroplastic OS=Cucumis sativus OX=3659 GN=rps14 PE=... [more]
sp|B2XWK3|RR14_FAGEA1.3e-1962.6430S ribosomal protein S14, chloroplastic OS=Fagopyrum esculentum subsp. ancestra... [more]
sp|Q8S8X6|RR14_ATRBE3.9e-1962.6430S ribosomal protein S14, chloroplastic OS=Atropa belladonna OX=33113 GN=rps14 ... [more]
sp|Q09MI0|RR14_CITSI3.9e-1962.6430S ribosomal protein S14, chloroplastic OS=Citrus sinensis OX=2711 GN=rps14 PE=... [more]
sp|Q49L00|RR14_EUCGG3.9e-1962.6430S ribosomal protein S14, chloroplastic OS=Eucalyptus globulus subsp. globulus ... [more]
BLAST of CsaV3_6G032160 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KIM2|A0A0A0KIM2_CUCSA5.7e-39100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G364110 PE=4 SV=1[more]
tr|A0A218KG37|A0A218KG37_CUCSA2.2e-1967.0330S ribosomal protein S14, chloroplastic OS=Cucumis sativus var. hardwickii OX=3... [more]
tr|A0A1X9Q1T3|A0A1X9Q1T3_CUCSA2.2e-1967.0330S ribosomal protein S14, chloroplastic OS=Cucumis sativus OX=3659 GN=rps14 PE=... [more]
tr|A0A1P8C7R9|A0A1P8C7R9_9ROSI2.2e-1967.0330S ribosomal protein S14, chloroplastic OS=Cucumis x hytivus OX=442738 GN=46791... [more]
tr|W8E1Z5|W8E1Z5_9ROSI2.2e-1967.03Ribosomal protein S14 OS=Cucumis hystrix OX=396994 GN=rps14 PE=3 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: INTERPRO
TermDefinition
IPR018271Ribosomal_S14_CS
IPR001209Ribosomal_S14
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006412 translation
cellular_component GO:0005840 ribosome
cellular_component GO:0005622 intracellular
molecular_function GO:0003735 structural constituent of ribosome
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_6G032160.1CsaV3_6G032160.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1..21
NoneNo IPR availableGENE3DG3DSA:4.10.830.10coord: 11..78
e-value: 1.8E-9
score: 39.2
NoneNo IPR availableSUPERFAMILYSSF57716Glucocorticoid receptor-like (DNA-binding domain)coord: 7..76
IPR001209Ribosomal protein S14PFAMPF00253Ribosomal_S14coord: 38..76
e-value: 5.5E-8
score: 32.4
IPR001209Ribosomal protein S14PANTHERPTHR1983630S RIBOSOMAL PROTEIN S14coord: 32..76
IPR018271Ribosomal protein S14, conserved sitePROSITEPS00527RIBOSOMAL_S14coord: 42..64

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_6G032160Silver-seed gourdcarcucB0166
CsaV3_6G032160Silver-seed gourdcarcucB0736
CsaV3_6G032160Cucumber (Gy14) v2cgybcucB298
CsaV3_6G032160Cucumber (Gy14) v1cgycucB044
CsaV3_6G032160Cucurbita maxima (Rimu)cmacucB0220
CsaV3_6G032160Cucurbita maxima (Rimu)cmacucB0224
CsaV3_6G032160Cucurbita maxima (Rimu)cmacucB0950
CsaV3_6G032160Cucurbita moschata (Rifu)cmocucB0208
CsaV3_6G032160Cucurbita moschata (Rifu)cmocucB0937
CsaV3_6G032160Cucurbita pepo (Zucchini)cpecucB0131
CsaV3_6G032160Cucurbita pepo (Zucchini)cpecucB1036
CsaV3_6G032160Wild cucumber (PI 183967)cpicucB363
CsaV3_6G032160Bottle gourd (USVL1VR-Ls)cuclsiB500
CsaV3_6G032160Melon (DHL92) v3.5.1cucmeB475
CsaV3_6G032160Melon (DHL92) v3.6.1cucmedB465
CsaV3_6G032160Watermelon (Charleston Gray)cucwcgB514
CsaV3_6G032160Watermelon (Charleston Gray)cucwcgB523
CsaV3_6G032160Watermelon (97103) v1cucwmB481
CsaV3_6G032160Watermelon (97103) v2cucwmbB505
CsaV3_6G032160Wax gourdcucwgoB594
CsaV3_6G032160Wax gourdcucwgoB606
CsaV3_6G032160Wax gourdcucwgoB613