CsaV3_6G022760 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCCACTAGGTCTCACCTATTTATCCAAAACTAATATCTATATGGATTTGGCCAAAGTGATGGCTGGTTAGCTATTAAGCATGGGTAGAACACAACACAATATTCTTTTAAAACACAAGAACAGATTTATTGAAATGATTTTTTTAAAAAATATACATCATTTTTACACCAAAGAAGGTTTAAAGCAAACATGTTGATGCATTTAGATGTTTAAAAACTTAGCTTGATGCATTTCACCCTAAGAATTTATGATTACTGCCCAAATATATGCCTTTTAATCTCTACTTGACCAATATTTCATCATGTCTAACAAATTTGTTGCATTAACAAGTGTCTTATATGTGTCAAACAAGTGTTAGAGTGCTTGACATGAACACGCTAGCCAAACTTAGGTGTCTGTGCTTCTTAGTTGGTTACTATGCATATTCACATTTTTTTTTCCATGGTTATGTTTCTGAGCTGATGTCTCCCTCTCAATGTAAGAATGAACGATAGATTTTAGCCAAGGAGTACAGTCTGGTTGGCAATGGTGTCACTTTTCTGGTAGCATGTTTCTTGACTCTTCCCGACAATAAACTTTATATGCAAACTTTCTTTCAGGAGTGAAGGAAATTGTAGCATATCTTCTCAGTTACATTCAAACAATGATGTCGAAGATGCTGCTAGCATGGAAAAGCAAATAAGTGCGGACAACCTTGCTTCTAATGGGAATTACATTATTAAGCAGTCGTTATTCCAGAGTGGGGTGCTCAGGACCAATTGCATAGACTGCCTCGACCGTACAAATGTTGCACAATATGCATACGGGTTTGCTGCTCTTGGACACCAGCTTCATGCCTTGGAAATTTTAGATTCCCCCAAAATCCATCTTGATGCCCCTTTAGCTGATGAGTGA ATGTCCACTAGGAGTGAAGGAAATTGTAGCATATCTTCTCAGTTACATTCAAACAATGATGTCGAAGATGCTGCTAGCATGGAAAAGCAAATAAGTGCGGACAACCTTGCTTCTAATGGGAATTACATTATTAAGCAGTCGTTATTCCAGAGTGGGGTGCTCAGGACCAATTGCATAGACTGCCTCGACCGTACAAATGTTGCACAATATGCATACGGGTTTGCTGCTCTTGGACACCAGCTTCATGCCTTGGAAATTTTAGATTCCCCCAAAATCCATCTTGATGCCCCTTTAGCTGATGAGTGA ATGTCCACTAGGAGTGAAGGAAATTGTAGCATATCTTCTCAGTTACATTCAAACAATGATGTCGAAGATGCTGCTAGCATGGAAAAGCAAATAAGTGCGGACAACCTTGCTTCTAATGGGAATTACATTATTAAGCAGTCGTTATTCCAGAGTGGGGTGCTCAGGACCAATTGCATAGACTGCCTCGACCGTACAAATGTTGCACAATATGCATACGGGTTTGCTGCTCTTGGACACCAGCTTCATGCCTTGGAAATTTTAGATTCCCCCAAAATCCATCTTGATGCCCCTTTAGCTGATGAGTGA MSTRSEGNCSISSQLHSNNDVEDAASMEKQISADNLASNGNYIIKQSLFQSGVLRTNCIDCLDRTNVAQYAYGFAALGHQLHALEILDSPKIHLDAPLADE
BLAST of CsaV3_6G022760 vs. NCBI nr
Match: XP_011655440.1 (PREDICTED: phosphoinositide phosphatase SAC3 [Cucumis sativus]) HSP 1 Score: 198.4 bits (503), Expect = 1.2e-47 Identity = 99/100 (99.00%), Postives = 99/100 (99.00%), Query Frame = 0
BLAST of CsaV3_6G022760 vs. NCBI nr
Match: KGN51429.1 (hypothetical protein Csa_5G537540 [Cucumis sativus]) HSP 1 Score: 195.7 bits (496), Expect = 7.8e-47 Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 0
BLAST of CsaV3_6G022760 vs. NCBI nr
Match: XP_016902578.1 (PREDICTED: LOW QUALITY PROTEIN: phosphoinositide phosphatase SAC3 [Cucumis melo]) HSP 1 Score: 188.0 bits (476), Expect = 1.6e-44 Identity = 93/100 (93.00%), Postives = 96/100 (96.00%), Query Frame = 0
BLAST of CsaV3_6G022760 vs. NCBI nr
Match: XP_022937293.1 (phosphoinositide phosphatase SAC3-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 175.6 bits (444), Expect = 8.4e-41 Identity = 86/100 (86.00%), Postives = 92/100 (92.00%), Query Frame = 0
BLAST of CsaV3_6G022760 vs. NCBI nr
Match: XP_022937301.1 (phosphoinositide phosphatase SAC4-like isoform X2 [Cucurbita moschata]) HSP 1 Score: 175.6 bits (444), Expect = 8.4e-41 Identity = 86/100 (86.00%), Postives = 92/100 (92.00%), Query Frame = 0
BLAST of CsaV3_6G022760 vs. TAIR10
Match: AT5G20840.1 (Phosphoinositide phosphatase family protein) HSP 1 Score: 104.8 bits (260), Expect = 3.3e-23 Identity = 54/95 (56.84%), Postives = 64/95 (67.37%), Query Frame = 0
BLAST of CsaV3_6G022760 vs. TAIR10
Match: AT3G43220.1 (Phosphoinositide phosphatase family protein) HSP 1 Score: 96.7 bits (239), Expect = 9.0e-21 Identity = 52/89 (58.43%), Postives = 59/89 (66.29%), Query Frame = 0
BLAST of CsaV3_6G022760 vs. TAIR10
Match: AT1G22620.1 (Phosphoinositide phosphatase family protein) HSP 1 Score: 85.5 bits (210), Expect = 2.1e-17 Identity = 46/88 (52.27%), Postives = 58/88 (65.91%), Query Frame = 0
BLAST of CsaV3_6G022760 vs. TAIR10
Match: AT3G14205.1 (Phosphoinositide phosphatase family protein) HSP 1 Score: 83.6 bits (205), Expect = 7.9e-17 Identity = 37/55 (67.27%), Postives = 43/55 (78.18%), Query Frame = 0
BLAST of CsaV3_6G022760 vs. TAIR10
Match: AT1G17340.1 (Phosphoinositide phosphatase family protein) HSP 1 Score: 75.9 bits (185), Expect = 1.6e-14 Identity = 35/54 (64.81%), Postives = 40/54 (74.07%), Query Frame = 0
BLAST of CsaV3_6G022760 vs. Swiss-Prot
Match: sp|Q7XZU1|SAC4_ARATH (Phosphoinositide phosphatase SAC4 OS=Arabidopsis thaliana OX=3702 GN=SAC4 PE=2 SV=1) HSP 1 Score: 104.8 bits (260), Expect = 5.9e-22 Identity = 54/95 (56.84%), Postives = 64/95 (67.37%), Query Frame = 0
BLAST of CsaV3_6G022760 vs. Swiss-Prot
Match: sp|Q7XZU2|SAC3_ARATH (Phosphoinositide phosphatase SAC3 OS=Arabidopsis thaliana OX=3702 GN=SAC3 PE=2 SV=1) HSP 1 Score: 96.7 bits (239), Expect = 1.6e-19 Identity = 52/89 (58.43%), Postives = 59/89 (66.29%), Query Frame = 0
BLAST of CsaV3_6G022760 vs. Swiss-Prot
Match: sp|Q7XZU3|SAC1_ARATH (Phosphoinositide phosphatase SAC1 OS=Arabidopsis thaliana OX=3702 GN=SAC1 PE=1 SV=1) HSP 1 Score: 85.5 bits (210), Expect = 3.7e-16 Identity = 46/88 (52.27%), Postives = 58/88 (65.91%), Query Frame = 0
BLAST of CsaV3_6G022760 vs. Swiss-Prot
Match: sp|Q94A27|SAC2_ARATH (Phosphoinositide phosphatase SAC2 OS=Arabidopsis thaliana OX=3702 GN=SAC2 PE=2 SV=1) HSP 1 Score: 83.6 bits (205), Expect = 1.4e-15 Identity = 37/55 (67.27%), Postives = 43/55 (78.18%), Query Frame = 0
BLAST of CsaV3_6G022760 vs. Swiss-Prot
Match: sp|Q8RW97|SAC5_ARATH (Phosphoinositide phosphatase SAC5 OS=Arabidopsis thaliana OX=3702 GN=SAC5 PE=2 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 3.0e-13 Identity = 35/54 (64.81%), Postives = 40/54 (74.07%), Query Frame = 0
BLAST of CsaV3_6G022760 vs. TrEMBL
Match: tr|A0A0A0KRB7|A0A0A0KRB7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G537540 PE=4 SV=1) HSP 1 Score: 195.7 bits (496), Expect = 5.2e-47 Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 0
BLAST of CsaV3_6G022760 vs. TrEMBL
Match: tr|A0A1S4E2Y2|A0A1S4E2Y2_CUCME (LOW QUALITY PROTEIN: phosphoinositide phosphatase SAC3 OS=Cucumis melo OX=3656 GN=LOC103499357 PE=4 SV=1) HSP 1 Score: 188.0 bits (476), Expect = 1.1e-44 Identity = 93/100 (93.00%), Postives = 96/100 (96.00%), Query Frame = 0
BLAST of CsaV3_6G022760 vs. TrEMBL
Match: tr|A0A2H5ND35|A0A2H5ND35_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_030180 PE=4 SV=1) HSP 1 Score: 129.8 bits (325), Expect = 3.5e-27 Identity = 61/100 (61.00%), Postives = 78/100 (78.00%), Query Frame = 0
BLAST of CsaV3_6G022760 vs. TrEMBL
Match: tr|A0A067G2D2|A0A067G2D2_CITSI (Uncharacterized protein (Fragment) OS=Citrus sinensis OX=2711 GN=CISIN_1g038661mg PE=4 SV=1) HSP 1 Score: 129.8 bits (325), Expect = 3.5e-27 Identity = 61/100 (61.00%), Postives = 78/100 (78.00%), Query Frame = 0
BLAST of CsaV3_6G022760 vs. TrEMBL
Match: tr|W9SK95|W9SK95_9ROSA (Polyphosphoinositide phosphatase OS=Morus notabilis OX=981085 GN=L484_019556 PE=4 SV=1) HSP 1 Score: 127.9 bits (320), Expect = 1.3e-26 Identity = 60/100 (60.00%), Postives = 79/100 (79.00%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |