CsaV3_6G022640 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_6G022640
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	major allergen Pru ar 1-like
Location	chr6 : 15559187 .. 15561233 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CACCAAGCTCATATCTAAAAGCCTTTGTAAGTAATAAAAATTATTTTTTCTAAAGTTACATAGCTGAGATAATATATAGCAATATGGGTGTTTTCACATACGAAAACGAAGTAACCTCAGTGGTTCCTCCAACTAAATTCTTTAAAGCATTTATTCTTGATGCTGACAACCTTTACTCTAAGATTATCCCAAGTCATCCTCAAACTGAAATTGTTGAAGGAAATGGTGGCCCTGGAACTATCAAGAAGATCACCTTCAGCCATGGTAATTAACCTTTTATTTACCATCATTACCTTTGGTGTTTTTCTCCTAATTACCAATTTTACCTTTTTAATTATGTGTCATATTGTCTCAACTTTAAAAAAAATGTATTTTACTTCCTATCCTCGTGTGTTTAACAAACTCGTGGACTTTTGAAAACGTGTAATTTGTCATTTTTGATGTGTTTAGTAGGTAATTGGTTCTATTTAACCCTTTTTTTAGAAAGTTGTCAAAGATAATAAATTTGATAAAATATTTACAACATGCTGCAACATTTTAGATTCTATCAATAATAACGTTAATAGACAATGATATGCTTCTATCAGTGATACTAATAGATAGTGATAAAAGTCTATCAGAATTTAAAATTTCTATAGCTTATAAATATTTTTATTATTTTTAAAAAAGTTTTCCAACTTCTTTTTATAAAAATTTAGGAAACCATTGGATACTGAAATGGAAAGGCTAGGTCATATGTTTGTTAATTATTTGGGTTTATGTTTTTGGGTTGTGACTAATAATTTTGCTTGGTTTCTTCAATTTATTTACATTAGATTTAATTTGTTTCACTTAAATGCGAAATTATAAGGGATGTTTGAACACTCGTACTAGAATTAGAATGTATTATAATGTATTCCAAAATTCATACTTGAATTGAGCATTTTGATTAGAATGTATTATAATGTATTCCAAAATTCATACTTGAATTGAGCATTTTGAGTTTAAATTGTAATATTAAAATTATTTCATTTGGTTGTTTTTCAATTAAGCTCGTTTTTACTTTTTTTTTTTCAATTTAATTGTTGTTATGCTTTTCATTTGACACATGAACATAAATAGTTATCTCATGGAGTTGTAGTAATGTTTTTCCTACTACTAACAAAGTATATTTTTTTTAAAAAAATTCAAAGTTGCATCAATCTTTAATTTGAGTTTTTTAGAAAAAAATTAATTAGTATAACGTTTTATTGATATAAATTTTAATTTATATTTAAAAAATATAATAATTTTTTAATAAAATGTTAAACACAATAAAAAGAAATTGTTGTGAATAACAAAATATCCAAACTATTTATAAAATATAATAAAAAAATTGAATAGGCTATACATCACAAAATCTGATATATTTTATAAATAGTTTAAAATTATACTATTTTAAAAAATGATCCTACAATAAATTTAGACTGTATTGTATTAATAAAAACTATATATTTATTAATTAAATTTTTGCAGGAGGGGAATTGAAAACCATAGCGCACAGGCTGGACGTAGTGGACGAAGCATCATTGACGTACAAATATACGGTGTTAGAAGGAGACCTTATTTCAGAAACTATTGACCAAATTGTTAAGGAAATTAAGGTAACGGAGGGTCCTGACGGAGGTTCCATTTTGAAGAGCACTAGCGTTTACCACACCAAAGGAGACAACCAGCTCGACGAGGGAAAACTCAAAATCGGCGAAGAAAAGGGATTGGCTCTTCTCAAAGCCGCCGAGGCCTACCTCTTGGCCAACCCCGCCGAATACAACTAATTATAAAACCAAATCTATAAATAAATATATGCATTGTGTTAGCCTTCTTCTGATAAGGGGCATTGGAGTGTGTGTTGTGTCAATTTGTATGCTTCTGAGTTGTGGGTGAATTGTGATTTTCAAAGGGTAAAAAAAATGTTATGTTCAAGTTGTATTATTGGTTTCAATAAAATGAGTTGGCCTTATTATATTTTGATATTCTTGGTCTCCCAAGTTTGGCTAAATTACAAGTTGCCTTAACCAATTGAAAAAGA

mRNA sequence

ATGGGTGTTTTCACATACGAAAACGAAGTAACCTCAGTGGTTCCTCCAACTAAATTCTTTAAAGCATTTATTCTTGATGCTGACAACCTTTACTCTAAGATTATCCCAAGTCATCCTCAAACTGAAATTGTTGAAGGAAATGGTGGCCCTGGAACTATCAAGAAGATCACCTTCAGCCATGGAGGGGAATTGAAAACCATAGCGCACAGGCTGGACGTAGTGGACGAAGCATCATTGACGTACAAATATACGGTGTTAGAAGGAGACCTTATTTCAGAAACTATTGACCAAATTGTTAAGGAAATTAAGGTAACGGAGGGTCCTGACGGAGGTTCCATTTTGAAGAGCACTAGCGTTTACCACACCAAAGGAGACAACCAGCTCGACGAGGGAAAACTCAAAATCGGCGAAGAAAAGGGATTGGCTCTTCTCAAAGCCGCCGAGGCCTACCTCTTGGCCAACCCCGCCGAATACAACTAA

Coding sequence (CDS)

ATGGGTGTTTTCACATACGAAAACGAAGTAACCTCAGTGGTTCCTCCAACTAAATTCTTTAAAGCATTTATTCTTGATGCTGACAACCTTTACTCTAAGATTATCCCAAGTCATCCTCAAACTGAAATTGTTGAAGGAAATGGTGGCCCTGGAACTATCAAGAAGATCACCTTCAGCCATGGAGGGGAATTGAAAACCATAGCGCACAGGCTGGACGTAGTGGACGAAGCATCATTGACGTACAAATATACGGTGTTAGAAGGAGACCTTATTTCAGAAACTATTGACCAAATTGTTAAGGAAATTAAGGTAACGGAGGGTCCTGACGGAGGTTCCATTTTGAAGAGCACTAGCGTTTACCACACCAAAGGAGACAACCAGCTCGACGAGGGAAAACTCAAAATCGGCGAAGAAAAGGGATTGGCTCTTCTCAAAGCCGCCGAGGCCTACCTCTTGGCCAACCCCGCCGAATACAACTAA

Protein sequence

MGVFTYENEVTSVVPPTKFFKAFILDADNLYSKIIPSHPQTEIVEGNGGPGTIKKITFSHGGELKTIAHRLDVVDEASLTYKYTVLEGDLISETIDQIVKEIKVTEGPDGGSILKSTSVYHTKGDNQLDEGKLKIGEEKGLALLKAAEAYLLANPAEYN

Homology

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BLAST of CsaV3_6G022640 vs. NCBI nr
Match: XP_004151334.1 (PREDICTED: major allergen Pru ar 1-like [Cucumis sativus] >KGN47408.1 hypothetical protein Csa_6G313090 [Cucumis sativus])

HSP 1 Score: 314.7 bits (805), Expect = 1.8e-82
Identity = 157/159 (98.74%), Postives = 157/159 (98.74%), Query Frame = 0


Query: 1   MGVFTYENEVTSVVPPTKFFKAFILDADNLYSKIIPSHPQTEIVEGNGGPGTIKKITFSH 60
           MGVFTYENEVTSVVPP K FKAFILDADNLYSKIIPSHPQTEIVEGNGGPGTIKKITFSH
Sbjct: 1   MGVFTYENEVTSVVPPAKLFKAFILDADNLYSKIIPSHPQTEIVEGNGGPGTIKKITFSH 60

Query: 61  GGELKTIAHRLDVVDEASLTYKYTVLEGDLISETIDQIVKEIKVTEGPDGGSILKSTSVY 120
           GGELKTIAHRLDVVDEASLTYKYTVLEGDLISETIDQIVKEIKVTEGPDGGSILKSTSVY
Sbjct: 61  GGELKTIAHRLDVVDEASLTYKYTVLEGDLISETIDQIVKEIKVTEGPDGGSILKSTSVY 120

Query: 121 HTKGDNQLDEGKLKIGEEKGLALLKAAEAYLLANPAEYN 160
           HTKGDNQLDEGKLKIGEEKGLALLKAAEAYLLANPAEYN
Sbjct: 121 HTKGDNQLDEGKLKIGEEKGLALLKAAEAYLLANPAEYN 159

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BLAST of CsaV3_6G022640 vs. NCBI nr
Match: XP_008458391.1 (PREDICTED: major allergen Pru ar 1-like [Cucumis melo])

HSP 1 Score: 298.1 bits (762), Expect = 1.8e-77
Identity = 148/159 (93.08%), Postives = 154/159 (96.86%), Query Frame = 0


Query: 1   MGVFTYENEVTSVVPPTKFFKAFILDADNLYSKIIPSHPQTEIVEGNGGPGTIKKITFSH 60
           MGVFT+ENEVTSV+PPTKFFKAFILDADNLY KIIP+ PQTEIVEG+GG GTIKKITF++
Sbjct: 1   MGVFTFENEVTSVIPPTKFFKAFILDADNLYPKIIPNQPQTEIVEGDGGAGTIKKITFNY 60

Query: 61  GGELKTIAHRLDVVDEASLTYKYTVLEGDLISETIDQIVKEIKVTEGPDGGSILKSTSVY 120
           GGELKTI HRLDVVDEASLTYKYTVLEGDLISETIDQIVKEIKVTEGPDGGSILKSTSVY
Sbjct: 61  GGELKTIKHRLDVVDEASLTYKYTVLEGDLISETIDQIVKEIKVTEGPDGGSILKSTSVY 120

Query: 121 HTKGDNQLDEGKLKIGEEKGLALLKAAEAYLLANPAEYN 160
           HTKGDNQLDEGKLK GEEKGLALLKAAEAYLLANPAEYN
Sbjct: 121 HTKGDNQLDEGKLKSGEEKGLALLKAAEAYLLANPAEYN 159

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BLAST of CsaV3_6G022640 vs. NCBI nr
Match: XP_004151333.2 (PREDICTED: major allergen Pru ar 1-like [Cucumis sativus] >KGN47407.1 hypothetical protein Csa_6G312590 [Cucumis sativus])

HSP 1 Score: 296.2 bits (757), Expect = 6.7e-77
Identity = 146/159 (91.82%), Postives = 150/159 (94.34%), Query Frame = 0


Query: 1   MGVFTYENEVTSVVPPTKFFKAFILDADNLYSKIIPSHPQTEIVEGNGGPGTIKKITFSH 60
           MG+FTYENEVTSVVPP K FKAFILDADNLYSKIIPSHPQTEIV G+GGPGTIKKITFSH
Sbjct: 1   MGIFTYENEVTSVVPPAKLFKAFILDADNLYSKIIPSHPQTEIVGGDGGPGTIKKITFSH 60

Query: 61  GGELKTIAHRLDVVDEASLTYKYTVLEGDLISETIDQIVKEIKVTEGPDGGSILKSTSVY 120
           GGE KTI HRLD+VDE SLTYKYTVLEGDLISETIDQIVKEIKVTEGPDGGSILKSTS+Y
Sbjct: 61  GGESKTIVHRLDIVDEVSLTYKYTVLEGDLISETIDQIVKEIKVTEGPDGGSILKSTSIY 120

Query: 121 HTKGDNQLDEGKLKIGEEKGLALLKAAEAYLLANPAEYN 160
           HTK  NQLDEGKLKIGEEKGLAL KAAEAYLLANPAEYN
Sbjct: 121 HTKEGNQLDEGKLKIGEEKGLALFKAAEAYLLANPAEYN 159

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BLAST of CsaV3_6G022640 vs. NCBI nr
Match: XP_008458392.1 (PREDICTED: major allergen Pru ar 1-like [Cucumis melo])

HSP 1 Score: 296.2 bits (757), Expect = 6.7e-77
Identity = 147/159 (92.45%), Postives = 154/159 (96.86%), Query Frame = 0


Query: 1   MGVFTYENEVTSVVPPTKFFKAFILDADNLYSKIIPSHPQTEIVEGNGGPGTIKKITFSH 60
           MGVFT+ENEVTSVVPPTKFFKAFIL+ADNLY KIIP+ PQTEIVEG+GG GTIKKITF++
Sbjct: 1   MGVFTFENEVTSVVPPTKFFKAFILNADNLYPKIIPNQPQTEIVEGDGGAGTIKKITFNY 60

Query: 61  GGELKTIAHRLDVVDEASLTYKYTVLEGDLISETIDQIVKEIKVTEGPDGGSILKSTSVY 120
           GGELKTI HRLDVVDEASLTYKYTVLEGDLISETIDQIVKEIKVTEGPDGGSILKSTS+Y
Sbjct: 61  GGELKTIKHRLDVVDEASLTYKYTVLEGDLISETIDQIVKEIKVTEGPDGGSILKSTSIY 120

Query: 121 HTKGDNQLDEGKLKIGEEKGLALLKAAEAYLLANPAEYN 160
           HTKGDNQLDEGKLK GEEKGLALLKAAEAYLLANPAEYN
Sbjct: 121 HTKGDNQLDEGKLKSGEEKGLALLKAAEAYLLANPAEYN 159

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BLAST of CsaV3_6G022640 vs. NCBI nr
Match: XP_023549146.1 (major allergen Pru ar 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 270.8 bits (691), Expect = 3.0e-69
Identity = 129/159 (81.13%), Postives = 145/159 (91.19%), Query Frame = 0


Query: 1   MGVFTYENEVTSVVPPTKFFKAFILDADNLYSKIIPSHPQTEIVEGNGGPGTIKKITFSH 60
           MGVFTYENEVT+V+PP KFFKAFILDAD LY KI+P  P+TE+VEG+GGPGTIK ITFSH
Sbjct: 1   MGVFTYENEVTTVIPPAKFFKAFILDADRLYPKIVPHQPKTEVVEGDGGPGTIKIITFSH 60

Query: 61  GGELKTIAHRLDVVDEASLTYKYTVLEGDLISETIDQIVKEIKVTEGPDGGSILKSTSVY 120
           GG++K+I HRLDVVDE SLTYKYTVLEG+L+S+ IDQI KE+KVT GPDGGSILKS S+Y
Sbjct: 61  GGQVKSIKHRLDVVDEKSLTYKYTVLEGELLSDNIDQISKELKVTAGPDGGSILKSVSIY 120

Query: 121 HTKGDNQLDEGKLKIGEEKGLALLKAAEAYLLANPAEYN 160
           HTKGD+Q+DE KLKIGEEKGL LLKAAEAYLLANPAEYN
Sbjct: 121 HTKGDHQIDEQKLKIGEEKGLGLLKAAEAYLLANPAEYN 159

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BLAST of CsaV3_6G022640 vs. Swiss-Prot
Match: sp|O50001|PRU1_PRUAR (Major allergen Pru ar 1 OS=Prunus armeniaca OX=36596 PE=1 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 4.9e-47
Identity = 90/160 (56.25%), Postives = 118/160 (73.75%), Query Frame = 0


Query: 1   MGVFTYENEVTSVVPPTKFFKAFILDADNLYSKIIPSHPQ-TEIVEGNGGPGTIKKITFS 60
           MGVFTYE E TSV+PP K FKAFILDADNL  K+ P+  + TEI+EG+GG GTIKK+TF 
Sbjct: 1   MGVFTYETEFTSVIPPEKLFKAFILDADNLIPKVAPTAVKGTEILEGDGGVGTIKKVTFG 60

Query: 61  HGGELKTIAHRLDVVDEASLTYKYTVLEGDLISETIDQIVKEIKVTEGPDGGSILKSTSV 120
            G +   + HR+D +D+ +L+Y YT++EGD +S+ I+ I  +IK+   PDGGSI+K+TS 
Sbjct: 61  EGSQYAYVKHRVDGIDKDNLSYSYTLIEGDALSDVIENIAYDIKLVASPDGGSIVKTTSH 120

Query: 121 YHTKGDNQLDEGKLKIGEEKGLALLKAAEAYLLANPAEYN 160
           YHTKGD ++ E ++K G+EK   L K  EAYLLANP  YN
Sbjct: 121 YHTKGDVEIKEEQVKAGKEKAAGLFKLVEAYLLANPDAYN 160

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BLAST of CsaV3_6G022640 vs. Swiss-Prot
Match: sp|P43186|BEV1M_BETPN (Major pollen allergen Bet v 1-M/N OS=Betula pendula OX=3505 GN=BETV1M PE=1 SV=2)

HSP 1 Score: 171.4 bits (433), Expect = 8.1e-42
Identity = 83/160 (51.88%), Postives = 111/160 (69.38%), Query Frame = 0


Query: 1   MGVFTYENEVTSVVPPTKFFKAFILDADNLYSKIIP-SHPQTEIVEGNGGPGTIKKITFS 60
           MGVF YE+E TSV+P  + FKAFILD DNL  K+ P +    E +EGNGGPGTIKKITF 
Sbjct: 1   MGVFNYESETTSVIPAARLFKAFILDGDNLIPKVAPQAISSVENIEGNGGPGTIKKITFP 60

Query: 61  HGGELKTIAHRLDVVDEASLTYKYTVLEGDLISETIDQIVKEIKVTEGPDGGSILKSTSV 120
            G   K +  R+D VD A+  Y Y+++EG  + +T+++I  EIK+   PDGGSILK ++ 
Sbjct: 61  EGSPFKYVKERVDEVDHANFKYSYSMIEGGALGDTLEKICNEIKIVATPDGGSILKISNK 120

Query: 121 YHTKGDNQLDEGKLKIGEEKGLALLKAAEAYLLANPAEYN 160
           YHTKGD+++    +K  +EKG ALL+A E+YLLA+   YN
Sbjct: 121 YHTKGDHEMKAEHMKAIKEKGEALLRAVESYLLAHSDAYN 160

[Close]

BLAST of CsaV3_6G022640 vs. Swiss-Prot
Match: sp|O24248|PRU1_PRUAV (Major allergen Pru av 1 OS=Prunus avium OX=42229 GN=PRUA1 PE=1 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 8.1e-42
Identity = 81/160 (50.62%), Postives = 112/160 (70.00%), Query Frame = 0


Query: 1   MGVFTYENEVTSVVPPTKFFKAFILDADNLYSKIIP-SHPQTEIVEGNGGPGTIKKITFS 60
           MGVFTYE+E TS +PP + FKAF+LDADNL  KI P +   +EI+EG+GGPGTIKKITF 
Sbjct: 1   MGVFTYESEFTSEIPPPRLFKAFVLDADNLVPKIAPQAIKHSEILEGDGGPGTIKKITFG 60

Query: 61  HGGELKTIAHRLDVVDEASLTYKYTVLEGDLISETIDQIVKEIKVTEGPDGGSILKSTSV 120
            G +   + H++D +D+ + +Y YT++EGD + +T+++I  E K+   P GGSI+KSTS 
Sbjct: 61  EGSQYGYVKHKIDSIDKENYSYSYTLIEGDALGDTLEKISYETKLVASPSGGSIIKSTSH 120

Query: 121 YHTKGDNQLDEGKLKIGEEKGLALLKAAEAYLLANPAEYN 160
           YHTKG+ ++ E  +K G+EK   L K  E YL  +P  YN
Sbjct: 121 YHTKGNVEIKEEHVKAGKEKASNLFKLIETYLKGHPDAYN 160

[Close]

BLAST of CsaV3_6G022640 vs. Swiss-Prot
Match: sp|P43211|MAL11_MALDO (Major allergen Mal d 1 OS=Malus domestica OX=3750 GN=MALD1 PE=1 SV=2)

HSP 1 Score: 168.7 bits (426), Expect = 5.3e-41
Identity = 83/160 (51.88%), Postives = 113/160 (70.62%), Query Frame = 0


Query: 1   MGVFTYENEVTSVVPPTKFFKAFILDADNLYSKIIP-SHPQTEIVEGNGGPGTIKKITFS 60
           MGV+T+ENE TS +PP++ FKAF+LDADNL  KI P +  Q EI+EGNGGPGTIKKITF 
Sbjct: 1   MGVYTFENEFTSEIPPSRLFKAFVLDADNLIPKIAPQAIKQAEILEGNGGPGTIKKITFG 60

Query: 61  HGGELKTIAHRLDVVDEASLTYKYTVLEGDLISETIDQIVKEIKVTEGPDGGSILKSTSV 120
            G +   + HR+D +DEAS +Y YT++EGD +++TI++I  E K+      GS +KS S 
Sbjct: 61  EGSQYGYVKHRIDSIDEASYSYSYTLIEGDALTDTIEKISYETKLV-ACGSGSTIKSISH 120

Query: 121 YHTKGDNQLDEGKLKIGEEKGLALLKAAEAYLLANPAEYN 160
           YHTKG+ ++ E  +K+G+EK   L K  E+YL  +P  YN
Sbjct: 121 YHTKGNIEIKEEHVKVGKEKAHGLFKLIESYLKDHPDAYN 159

[Close]

BLAST of CsaV3_6G022640 vs. Swiss-Prot
Match: sp|P43184|BEV1K_BETPN (Major pollen allergen Bet v 1-K OS=Betula pendula OX=3505 GN=BETV1K PE=1 SV=2)

HSP 1 Score: 167.5 bits (423), Expect = 1.2e-40
Identity = 81/160 (50.62%), Postives = 110/160 (68.75%), Query Frame = 0


Query: 1   MGVFTYENEVTSVVPPTKFFKAFILDADNLYSKIIP-SHPQTEIVEGNGGPGTIKKITFS 60
           MGVF YE+E TSV+P  + FKAFIL+ D L  K+ P +    E +EGNGGPGTIKKITF 
Sbjct: 1   MGVFNYESETTSVIPAARLFKAFILEGDTLIPKVAPQAISSVENIEGNGGPGTIKKITFP 60

Query: 61  HGGELKTIAHRLDVVDEASLTYKYTVLEGDLISETIDQIVKEIKVTEGPDGGSILKSTSV 120
            G   K +  R+D VD A+  Y Y+++EG  + +T+++I  EIK+   PDGGSILK ++ 
Sbjct: 61  EGSPFKYVKERVDEVDHANFKYSYSMIEGGALGDTLEKICNEIKIVATPDGGSILKISNK 120

Query: 121 YHTKGDNQLDEGKLKIGEEKGLALLKAAEAYLLANPAEYN 160
           YHTKGD+++    +K  +EKG ALL+A E+YLLA+   YN
Sbjct: 121 YHTKGDHEMKAEHMKAIKEKGEALLRAVESYLLAHSDAYN 160

[Close]

BLAST of CsaV3_6G022640 vs. TrEMBL
Match: tr|A0A0A0KD04|A0A0A0KD04_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G313090 PE=4 SV=1)

HSP 1 Score: 314.7 bits (805), Expect = 1.2e-82
Identity = 157/159 (98.74%), Postives = 157/159 (98.74%), Query Frame = 0


Query: 1   MGVFTYENEVTSVVPPTKFFKAFILDADNLYSKIIPSHPQTEIVEGNGGPGTIKKITFSH 60
           MGVFTYENEVTSVVPP K FKAFILDADNLYSKIIPSHPQTEIVEGNGGPGTIKKITFSH
Sbjct: 1   MGVFTYENEVTSVVPPAKLFKAFILDADNLYSKIIPSHPQTEIVEGNGGPGTIKKITFSH 60

Query: 61  GGELKTIAHRLDVVDEASLTYKYTVLEGDLISETIDQIVKEIKVTEGPDGGSILKSTSVY 120
           GGELKTIAHRLDVVDEASLTYKYTVLEGDLISETIDQIVKEIKVTEGPDGGSILKSTSVY
Sbjct: 61  GGELKTIAHRLDVVDEASLTYKYTVLEGDLISETIDQIVKEIKVTEGPDGGSILKSTSVY 120

Query: 121 HTKGDNQLDEGKLKIGEEKGLALLKAAEAYLLANPAEYN 160
           HTKGDNQLDEGKLKIGEEKGLALLKAAEAYLLANPAEYN
Sbjct: 121 HTKGDNQLDEGKLKIGEEKGLALLKAAEAYLLANPAEYN 159

[Close]

BLAST of CsaV3_6G022640 vs. TrEMBL
Match: tr|A0A1S3C906|A0A1S3C906_CUCME (major allergen Pru ar 1-like OS=Cucumis melo OX=3656 GN=LOC103497814 PE=4 SV=1)

HSP 1 Score: 298.1 bits (762), Expect = 1.2e-77
Identity = 148/159 (93.08%), Postives = 154/159 (96.86%), Query Frame = 0


Query: 1   MGVFTYENEVTSVVPPTKFFKAFILDADNLYSKIIPSHPQTEIVEGNGGPGTIKKITFSH 60
           MGVFT+ENEVTSV+PPTKFFKAFILDADNLY KIIP+ PQTEIVEG+GG GTIKKITF++
Sbjct: 1   MGVFTFENEVTSVIPPTKFFKAFILDADNLYPKIIPNQPQTEIVEGDGGAGTIKKITFNY 60

Query: 61  GGELKTIAHRLDVVDEASLTYKYTVLEGDLISETIDQIVKEIKVTEGPDGGSILKSTSVY 120
           GGELKTI HRLDVVDEASLTYKYTVLEGDLISETIDQIVKEIKVTEGPDGGSILKSTSVY
Sbjct: 61  GGELKTIKHRLDVVDEASLTYKYTVLEGDLISETIDQIVKEIKVTEGPDGGSILKSTSVY 120

Query: 121 HTKGDNQLDEGKLKIGEEKGLALLKAAEAYLLANPAEYN 160
           HTKGDNQLDEGKLK GEEKGLALLKAAEAYLLANPAEYN
Sbjct: 121 HTKGDNQLDEGKLKSGEEKGLALLKAAEAYLLANPAEYN 159

[Close]

BLAST of CsaV3_6G022640 vs. TrEMBL
Match: tr|A0A1S3C7A2|A0A1S3C7A2_CUCME (major allergen Pru ar 1-like OS=Cucumis melo OX=3656 GN=LOC103497815 PE=4 SV=1)

HSP 1 Score: 296.2 bits (757), Expect = 4.4e-77
Identity = 147/159 (92.45%), Postives = 154/159 (96.86%), Query Frame = 0


Query: 1   MGVFTYENEVTSVVPPTKFFKAFILDADNLYSKIIPSHPQTEIVEGNGGPGTIKKITFSH 60
           MGVFT+ENEVTSVVPPTKFFKAFIL+ADNLY KIIP+ PQTEIVEG+GG GTIKKITF++
Sbjct: 1   MGVFTFENEVTSVVPPTKFFKAFILNADNLYPKIIPNQPQTEIVEGDGGAGTIKKITFNY 60

Query: 61  GGELKTIAHRLDVVDEASLTYKYTVLEGDLISETIDQIVKEIKVTEGPDGGSILKSTSVY 120
           GGELKTI HRLDVVDEASLTYKYTVLEGDLISETIDQIVKEIKVTEGPDGGSILKSTS+Y
Sbjct: 61  GGELKTIKHRLDVVDEASLTYKYTVLEGDLISETIDQIVKEIKVTEGPDGGSILKSTSIY 120

Query: 121 HTKGDNQLDEGKLKIGEEKGLALLKAAEAYLLANPAEYN 160
           HTKGDNQLDEGKLK GEEKGLALLKAAEAYLLANPAEYN
Sbjct: 121 HTKGDNQLDEGKLKSGEEKGLALLKAAEAYLLANPAEYN 159

[Close]

BLAST of CsaV3_6G022640 vs. TrEMBL
Match: tr|A0A0A0KG80|A0A0A0KG80_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G312590 PE=4 SV=1)

HSP 1 Score: 296.2 bits (757), Expect = 4.4e-77
Identity = 146/159 (91.82%), Postives = 150/159 (94.34%), Query Frame = 0


Query: 1   MGVFTYENEVTSVVPPTKFFKAFILDADNLYSKIIPSHPQTEIVEGNGGPGTIKKITFSH 60
           MG+FTYENEVTSVVPP K FKAFILDADNLYSKIIPSHPQTEIV G+GGPGTIKKITFSH
Sbjct: 1   MGIFTYENEVTSVVPPAKLFKAFILDADNLYSKIIPSHPQTEIVGGDGGPGTIKKITFSH 60

Query: 61  GGELKTIAHRLDVVDEASLTYKYTVLEGDLISETIDQIVKEIKVTEGPDGGSILKSTSVY 120
           GGE KTI HRLD+VDE SLTYKYTVLEGDLISETIDQIVKEIKVTEGPDGGSILKSTS+Y
Sbjct: 61  GGESKTIVHRLDIVDEVSLTYKYTVLEGDLISETIDQIVKEIKVTEGPDGGSILKSTSIY 120

Query: 121 HTKGDNQLDEGKLKIGEEKGLALLKAAEAYLLANPAEYN 160
           HTK  NQLDEGKLKIGEEKGLAL KAAEAYLLANPAEYN
Sbjct: 121 HTKEGNQLDEGKLKIGEEKGLALFKAAEAYLLANPAEYN 159

[Close]

BLAST of CsaV3_6G022640 vs. TrEMBL
Match: tr|A0A2N9EZ72|A0A2N9EZ72_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS8027 PE=3 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 2.3e-49
Identity = 96/160 (60.00%), Postives = 122/160 (76.25%), Query Frame = 0


Query: 1   MGVFTYENEVTSVVPPTKFFKAFILDADNLYSKIIP-SHPQTEIVEGNGGPGTIKKITFS 60
           MGVFTYE E TSV+PP K FKAF+LDADN+  K+ P +   +EI+EGNGGPGTIKKITF 
Sbjct: 1   MGVFTYETETTSVIPPPKLFKAFVLDADNVIPKVAPQAIKSSEIIEGNGGPGTIKKITFG 60

Query: 61  HGGELKTIAHRLDVVDEASLTYKYTVLEGDLISETIDQIVKEIKVTEGPDGGSILKSTSV 120
            G + K + HR+D VD+A+ TY Y+V+EGD ISE +++I  EIK+   PDGGSILKSTS 
Sbjct: 61  EGSQFKYVKHRIDEVDQANFTYNYSVIEGDAISEILEKISYEIKIVASPDGGSILKSTSK 120

Query: 121 YHTKGDNQLDEGKLKIGEEKGLALLKAAEAYLLANPAEYN 160
           YHTKGD+++ E ++K G+EK   L KA EAYLL++P  YN
Sbjct: 121 YHTKGDHEIKEEQIKAGKEKAAGLFKAVEAYLLSHPDAYN 160

The following BLAST results are available for this feature:

BLAST of CsaV3_6G022640 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004151334.1	1.8e-82	98.74	PREDICTED: major allergen Pru ar 1-like [Cucumis sativus] >KGN47408.1 hypothetic...	[more]
XP_008458391.1	1.8e-77	93.08	PREDICTED: major allergen Pru ar 1-like [Cucumis melo]	[more]
XP_004151333.2	6.7e-77	91.82	PREDICTED: major allergen Pru ar 1-like [Cucumis sativus] >KGN47407.1 hypothetic...	[more]
XP_008458392.1	6.7e-77	92.45	PREDICTED: major allergen Pru ar 1-like [Cucumis melo]	[more]
XP_023549146.1	3.0e-69	81.13	major allergen Pru ar 1-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsaV3_6G022640 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of CsaV3_6G022640 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|O50001\|PRU1_PRUAR	4.9e-47	56.25	Major allergen Pru ar 1 OS=Prunus armeniaca OX=36596 PE=1 SV=1	[more]
sp\|P43186\|BEV1M_BETPN	8.1e-42	51.88	Major pollen allergen Bet v 1-M/N OS=Betula pendula OX=3505 GN=BETV1M PE=1 SV=2	[more]
sp\|O24248\|PRU1_PRUAV	8.1e-42	50.63	Major allergen Pru av 1 OS=Prunus avium OX=42229 GN=PRUA1 PE=1 SV=1	[more]
sp\|P43211\|MAL11_MALDO	5.3e-41	51.88	Major allergen Mal d 1 OS=Malus domestica OX=3750 GN=MALD1 PE=1 SV=2	[more]
sp\|P43184\|BEV1K_BETPN	1.2e-40	50.63	Major pollen allergen Bet v 1-K OS=Betula pendula OX=3505 GN=BETV1K PE=1 SV=2	[more]

BLAST of CsaV3_6G022640 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KD04\|A0A0A0KD04_CUCSA	1.2e-82	98.74	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G313090 PE=4 SV=1	[more]
tr\|A0A1S3C906\|A0A1S3C906_CUCME	1.2e-77	93.08	major allergen Pru ar 1-like OS=Cucumis melo OX=3656 GN=LOC103497814 PE=4 SV=1	[more]
tr\|A0A1S3C7A2\|A0A1S3C7A2_CUCME	4.4e-77	92.45	major allergen Pru ar 1-like OS=Cucumis melo OX=3656 GN=LOC103497815 PE=4 SV=1	[more]
tr\|A0A0A0KG80\|A0A0A0KG80_CUCSA	4.4e-77	91.82	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G312590 PE=4 SV=1	[more]
tr\|A0A2N9EZ72\|A0A2N9EZ72_FAGSY	2.3e-49	60.00	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS8027 PE=3 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0009607	response to biotic stimulus
GO:0006952	defense response

Vocabulary: **INTERPRO**
Term	Definition
IPR023393	START-like_dom_sf
IPR000916	Bet_v_I/MLP
IPR024949	Bet_v_I_allergen

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006952	defense response
biological_process	GO:0009607	response to biotic stimulus
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_6G022640.1	CsaV3_6G022640.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR024949	Bet v I type allergen	PRINTS	PR00634	BETALLERGEN	coord: 3..23 score: 53.19 coord: 26..36 score: 49.32 coord: 49..58 score: 83.83 coord: 84..97 score: 27.74 coord: 109..125 score: 65.71 coord: 143..153 score: 69.34 coord: 65..84 score: 37.07
IPR000916	Bet v I/Major latex protein	SMART	SM01037	Bet_v_1_2	coord: 1..154 e-value: 0.0083 score: -10.3
IPR000916	Bet v I/Major latex protein	PFAM	PF00407	Bet_v_1	coord: 1..154 e-value: 1.7E-26 score: 92.9
IPR023393	START-like domain superfamily	GENE3D	G3DSA:3.30.530.20		coord: 1..158 e-value: 2.1E-51 score: 176.2
None	No IPR available	PANTHER	PTHR31213:SF11	SUBFAMILY NOT NAMED	coord: 1..158
None	No IPR available	PANTHER	PTHR31213	FAMILY NOT NAMED	coord: 1..158
None	No IPR available	CDD	cd07816	Bet_v1-like	coord: 4..151 e-value: 1.21325E-51 score: 162.744
None	No IPR available	SUPERFAMILY	SSF55961	Bet v1-like	coord: 2..156

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_6G022640	Cucumber (Chinese Long) v3	cuccucB148
CsaV3_6G022640	Cucumber (Chinese Long) v3	cuccucB184
CsaV3_6G022640	Silver-seed gourd	carcucB0086
CsaV3_6G022640	Silver-seed gourd	carcucB0310
CsaV3_6G022640	Silver-seed gourd	carcucB0742
CsaV3_6G022640	Cucumber (Gy14) v2	cgybcucB149
CsaV3_6G022640	Cucumber (Gy14) v2	cgybcucB298
CsaV3_6G022640	Cucumber (Gy14) v1	cgycucB067
CsaV3_6G022640	Cucumber (Gy14) v1	cgycucB396
CsaV3_6G022640	Cucurbita maxima (Rimu)	cmacucB0311
CsaV3_6G022640	Cucurbita maxima (Rimu)	cmacucB0450
CsaV3_6G022640	Cucurbita maxima (Rimu)	cmacucB1001
CsaV3_6G022640	Cucurbita maxima (Rimu)	cmacucB1074
CsaV3_6G022640	Cucurbita moschata (Rifu)	cmocucB0304
CsaV3_6G022640	Cucurbita moschata (Rifu)	cmocucB0443
CsaV3_6G022640	Cucurbita moschata (Rifu)	cmocucB1056
CsaV3_6G022640	Cucurbita pepo (Zucchini)	cpecucB0175
CsaV3_6G022640	Cucurbita pepo (Zucchini)	cpecucB0404
CsaV3_6G022640	Cucurbita pepo (Zucchini)	cpecucB0780
CsaV3_6G022640	Wild cucumber (PI 183967)	cpicucB185
CsaV3_6G022640	Wild cucumber (PI 183967)	cpicucB365
CsaV3_6G022640	Bottle gourd (USVL1VR-Ls)	cuclsiB425
CsaV3_6G022640	Bottle gourd (USVL1VR-Ls)	cuclsiB492
CsaV3_6G022640	Melon (DHL92) v3.5.1	cucmeB447
CsaV3_6G022640	Melon (DHL92) v3.5.1	cucmeB509
CsaV3_6G022640	Melon (DHL92) v3.6.1	cucmedB439
CsaV3_6G022640	Melon (DHL92) v3.6.1	cucmedB497
CsaV3_6G022640	Watermelon (Charleston Gray)	cucwcgB494
CsaV3_6G022640	Watermelon (Charleston Gray)	cucwcgB498
CsaV3_6G022640	Watermelon (97103) v1	cucwmB522
CsaV3_6G022640	Watermelon (97103) v1	cucwmB563
CsaV3_6G022640	Watermelon (97103) v2	cucwmbB483
CsaV3_6G022640	Watermelon (97103) v2	cucwmbB488
CsaV3_6G022640	Wax gourd	cucwgoB576