CsaV3_6G022430 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_6G022430
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionGlutamate receptor
Locationchr6 : 15373500 .. 15373769 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAATGAACCATTCATCAAACTATCTCTACAACCTCGACATCAATGAAAACGGTCCCAAGTTGCGAGACGCATTGTCAAATGTTAGGTTTAGAGGGTTAGCTAGTGAGTTTGGTCTCGTCAATGGCCAATTACAATCATTCGTTTTCGAGATAGTGAACGTGGTCGGTAACGAAAGAAGGAGTGTGGGGTTTTGGACGCCGAAAGCTGGGCTGACAACAAGTCTACGACACTCGGGGAGAAAAAGGGAATTGAGACCGATCATATAG

mRNA sequence

ATGAAAATGAACCATTCATCAAACTATCTCTACAACCTCGACATCAATGAAAACGGTCCCAAGTTGCGAGACGCATTGTCAAATGTTAGGTTTAGAGGGTTAGCTAGTGAGTTTGGTCTCGTCAATGGCCAATTACAATCATTCGTTTTCGAGATAGTGAACGTGGTCGGTAACGAAAGAAGGAGTGTGGGGTTTTGGACGCCGAAAGCTGGGCTGACAACAAGTCTACGACACTCGGGGAGAAAAAGGGAATTGAGACCGATCATATAG

Coding sequence (CDS)

ATGAAAATGAACCATTCATCAAACTATCTCTACAACCTCGACATCAATGAAAACGGTCCCAAGTTGCGAGACGCATTGTCAAATGTTAGGTTTAGAGGGTTAGCTAGTGAGTTTGGTCTCGTCAATGGCCAATTACAATCATTCGTTTTCGAGATAGTGAACGTGGTCGGTAACGAAAGAAGGAGTGTGGGGTTTTGGACGCCGAAAGCTGGGCTGACAACAAGTCTACGACACTCGGGGAGAAAAAGGGAATTGAGACCGATCATATAG

Protein sequence

MKMNHSSNYLYNLDINENGPKLRDALSNVRFRGLASEFGLVNGQLQSFVFEIVNVVGNERRSVGFWTPKAGLTTSLRHSGRKRELRPII
Homology
[Close]
BLAST of CsaV3_6G022430 vs. NCBI nr
Match: XP_011658435.1 (PREDICTED: LOW QUALITY PROTEIN: glutamate receptor 2.5-like, partial [Cucumis sativus])

HSP 1 Score: 163.3 bits (412), Expect = 3.8e-37
Identity = 79/80 (98.75%), Postives = 80/80 (100.00%), Query Frame = 0 

Query: 10  LYNLDINENGPKLRDALSNVRFRGLASEFGLVNGQLQSFVFEIVNVVGNERRSVGFWTPK 69
           +YNLDINENGPKLRDALSNVRFRGLASEFGLVNGQLQSFVFEIVNVVGNERRSVGFWTPK
Sbjct: 164 VYNLDINENGPKLRDALSNVRFRGLASEFGLVNGQLQSFVFEIVNVVGNERRSVGFWTPK 223

Query: 70  AGLTTSLRHSGRKRELRPII 90
           AGLTTSLRHSGRKRELRPII
Sbjct: 224 AGLTTSLRHSGRKRELRPII 243

[Close]
BLAST of CsaV3_6G022430 vs. NCBI nr
Match: XP_016899964.1 (PREDICTED: glutamate receptor 2.5-like [Cucumis melo])

HSP 1 Score: 160.6 bits (405), Expect = 2.5e-36
Identity = 77/89 (86.52%), Postives = 83/89 (93.26%), Query Frame = 0 

Query: 1   MKMNHSSNYLYNLDINENGPKLRDALSNVRFRGLASEFGLVNGQLQSFVFEIVNVVGNER 60
           MK N+SSNYLYNL IN+NGPKLR+ALSNVRFRGLA EF LVNGQLQSFVFEIVNV+GNER
Sbjct: 351 MKTNYSSNYLYNLGINQNGPKLREALSNVRFRGLAGEFSLVNGQLQSFVFEIVNVIGNER 410

Query: 61  RSVGFWTPKAGLTTSLRHSGRKRELRPII 90
           RSVGFWTPKAGLTTSLRHSG++  LRPII
Sbjct: 411 RSVGFWTPKAGLTTSLRHSGKESVLRPII 439

[Close]
BLAST of CsaV3_6G022430 vs. NCBI nr
Match: XP_022951720.1 (glutamate receptor 2.5-like [Cucurbita moschata])

HSP 1 Score: 116.3 bits (290), Expect = 5.3e-23
Identity = 54/85 (63.53%), Postives = 69/85 (81.18%), Query Frame = 0 

Query: 5   HSSNYLYNLDINENGPKLRDALSNVRFRGLASEFGLVNGQLQSFVFEIVNVVGNERRSVG 64
           +SSNYL+N+ +N+NGP+LR+ALS+V F GLA EF L+NGQLQS +FEIVNV+GN RR+VG
Sbjct: 365 NSSNYLFNVGVNQNGPRLREALSDVTFTGLAGEFSLINGQLQSTLFEIVNVIGNGRRNVG 424

Query: 65  FWTPKAGLTTSLRHSGRKRELRPII 90
           FW+P+ GLT  L  SG  + LR II
Sbjct: 425 FWSPETGLTRKLVDSGGAKGLRSII 449

[Close]
BLAST of CsaV3_6G022430 vs. NCBI nr
Match: XP_023002214.1 (glutamate receptor 2.2-like [Cucurbita maxima])

HSP 1 Score: 116.3 bits (290), Expect = 5.3e-23
Identity = 54/85 (63.53%), Postives = 69/85 (81.18%), Query Frame = 0 

Query: 5   HSSNYLYNLDINENGPKLRDALSNVRFRGLASEFGLVNGQLQSFVFEIVNVVGNERRSVG 64
           +SSNYL+N+ +N+NGP+LR+ALS+V F GLA EF L+NGQLQS +FEIVNV+GN RR+VG
Sbjct: 360 NSSNYLFNVGVNQNGPRLREALSDVTFMGLAGEFSLINGQLQSTLFEIVNVIGNGRRNVG 419

Query: 65  FWTPKAGLTTSLRHSGRKRELRPII 90
           FW+P+ GLT  L  SG  + LR II
Sbjct: 420 FWSPETGLTRKLVDSGGAKGLRSII 444

[Close]
BLAST of CsaV3_6G022430 vs. NCBI nr
Match: XP_023537858.1 (glutamate receptor 2.2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 116.3 bits (290), Expect = 5.3e-23
Identity = 54/85 (63.53%), Postives = 69/85 (81.18%), Query Frame = 0 

Query: 5   HSSNYLYNLDINENGPKLRDALSNVRFRGLASEFGLVNGQLQSFVFEIVNVVGNERRSVG 64
           +SSNYL+N+ +N+NGP+LR+ALS+V F GLA EF L+NGQLQS +FEIVNV+GN RR+VG
Sbjct: 295 NSSNYLFNVGVNQNGPRLREALSDVTFMGLAGEFSLINGQLQSTLFEIVNVIGNGRRNVG 354

Query: 65  FWTPKAGLTTSLRHSGRKRELRPII 90
           FW+P+ GLT  L  SG  + LR II
Sbjct: 355 FWSPETGLTRKLVDSGGAKGLRSII 379

[Close]
BLAST of CsaV3_6G022430 vs. TAIR10
Match: AT2G29100.1 (glutamate receptor 2.9)

HSP 1 Score: 84.3 bits (207), Expect = 4.1e-17
Identity = 42/80 (52.50%), Postives = 54/80 (67.50%), Query Frame = 0 

Query: 10  LYNLDINENGPKLRDALSNVRFRGLASEFGLVNGQLQSFVFEIVNVVGNERRSVGFWTPK 69
           L N+ ++  GP L+ A S VRF GLA EF L++GQLQS  FEI+N VGNE R +GFWTP+
Sbjct: 349 LGNVGVSLYGPSLQKAFSEVRFNGLAGEFKLIDGQLQSPKFEIINFVGNEERIIGFWTPR 408

Query: 70  AGLTTSLRHSGRKRELRPII 90
            GL  +   S  K+ L P+I
Sbjct: 409 DGLMDAT--SSNKKTLGPVI 426

[Close]
BLAST of CsaV3_6G022430 vs. TAIR10
Match: AT2G29120.1 (glutamate receptor 2.7)

HSP 1 Score: 77.4 bits (189), Expect = 5.0e-15
Identity = 35/72 (48.61%), Postives = 50/72 (69.44%), Query Frame = 0 

Query: 4   NHSSNYLYNLDINENGPKLRDALSNVRFRGLASEFGLVNGQLQSFVFEIVNVVGNERRSV 63
           N+ +N L  L ++  GP L  ALSNVRF GLA EF L+NGQL+S VF+++N++G+E R +
Sbjct: 354 NNKTN-LGTLGVSRYGPSLLKALSNVRFNGLAGEFELINGQLESSVFDVINIIGSEERII 413

Query: 64  GFWTPKAGLTTS 76
           G W P  G+  +
Sbjct: 414 GLWRPSNGIVNA 424

[Close]
BLAST of CsaV3_6G022430 vs. TAIR10
Match: AT5G11210.1 (glutamate receptor 2.5)

HSP 1 Score: 74.7 bits (182), Expect = 3.2e-14
Identity = 41/85 (48.24%), Postives = 54/85 (63.53%), Query Frame = 0 

Query: 10  LYNLDINENGPKLRDALSNVRFRGLASEFGLVNGQLQSFVFEIVNVVGNERRSVGFWTPK 69
           L  L +  +GPKL DALS V F+G+A  F L NG+L++  F+I+N+  +  R+VGFW  K
Sbjct: 281 LDELGVALSGPKLLDALSTVSFKGVAGRFQLKNGKLEATTFKIINIEESGERTVGFWKSK 340

Query: 70  AGLTTSLR-----HSGRKRELRPII 90
            GL  SLR     HS R+  LRPII
Sbjct: 341 VGLVKSLRVDKVSHSSRR--LRPII 363

[Close]
BLAST of CsaV3_6G022430 vs. TAIR10
Match: AT2G29110.1 (glutamate receptor 2.8)

HSP 1 Score: 74.3 bits (181), Expect = 4.2e-14
Identity = 35/63 (55.56%), Postives = 43/63 (68.25%), Query Frame = 0 

Query: 10  LYNLDINENGPKLRDALSNVRFRGLASEFGLVNGQLQSFVFEIVNVVGNERRSVGFWTPK 69
           L  L ++  GP L +ALS +RF GLA  F L++ QL+S  FEI+N VGNE R VGFWTP 
Sbjct: 352 LGTLHVSRYGPSLLEALSEIRFNGLAGRFNLIDRQLESPKFEIINFVGNEERIVGFWTPS 411

Query: 70  AGL 73
            GL
Sbjct: 412 NGL 414

[Close]
BLAST of CsaV3_6G022430 vs. TAIR10
Match: AT2G24720.1 (glutamate receptor 2.2)

HSP 1 Score: 72.4 bits (176), Expect = 1.6e-13
Identity = 35/72 (48.61%), Postives = 46/72 (63.89%), Query Frame = 0 

Query: 10  LYNLDINENGPKLRDALSNVRFRGLASEFGLVNGQLQSFVFEIVNVVGNERRSVGFWTPK 69
           L  L +++ GPKL   +S V+F+GLA +F  V+GQLQ  VFEIVN++G   RS+GFWT  
Sbjct: 346 LDGLGLSQFGPKLLQTVSTVQFKGLAGDFHFVSGQLQPSVFEIVNMIGTGERSIGFWTEG 405

Query: 70  AGLTTSLRHSGR 82
            GL   L    R
Sbjct: 406 NGLVKKLDQEPR 417

[Close]
BLAST of CsaV3_6G022430 vs. Swiss-Prot
Match: sp|O81078|GLR29_ARATH (Glutamate receptor 2.9 OS=Arabidopsis thaliana OX=3702 GN=GLR2.9 PE=2 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 7.3e-16
Identity = 42/80 (52.50%), Postives = 54/80 (67.50%), Query Frame = 0 

Query: 10  LYNLDINENGPKLRDALSNVRFRGLASEFGLVNGQLQSFVFEIVNVVGNERRSVGFWTPK 69
           L N+ ++  GP L+ A S VRF GLA EF L++GQLQS  FEI+N VGNE R +GFWTP+
Sbjct: 349 LGNVGVSLYGPSLQKAFSEVRFNGLAGEFKLIDGQLQSPKFEIINFVGNEERIIGFWTPR 408

Query: 70  AGLTTSLRHSGRKRELRPII 90
            GL  +   S  K+ L P+I
Sbjct: 409 DGLMDAT--SSNKKTLGPVI 426

[Close]
BLAST of CsaV3_6G022430 vs. Swiss-Prot
Match: sp|Q8LGN0|GLR27_ARATH (Glutamate receptor 2.7 OS=Arabidopsis thaliana OX=3702 GN=GLR2.7 PE=2 SV=3)

HSP 1 Score: 77.4 bits (189), Expect = 9.0e-14
Identity = 35/72 (48.61%), Postives = 50/72 (69.44%), Query Frame = 0 

Query: 4   NHSSNYLYNLDINENGPKLRDALSNVRFRGLASEFGLVNGQLQSFVFEIVNVVGNERRSV 63
           N+ +N L  L ++  GP L  ALSNVRF GLA EF L+NGQL+S VF+++N++G+E R +
Sbjct: 354 NNKTN-LGTLGVSRYGPSLLKALSNVRFNGLAGEFELINGQLESSVFDVINIIGSEERII 413

Query: 64  GFWTPKAGLTTS 76
           G W P  G+  +
Sbjct: 414 GLWRPSNGIVNA 424

[Close]
BLAST of CsaV3_6G022430 vs. Swiss-Prot
Match: sp|Q9LFN5|GLR25_ARATH (Glutamate receptor 2.5 OS=Arabidopsis thaliana OX=3702 GN=GLR2.5 PE=2 SV=2)

HSP 1 Score: 74.7 bits (182), Expect = 5.8e-13
Identity = 41/85 (48.24%), Postives = 54/85 (63.53%), Query Frame = 0 

Query: 10  LYNLDINENGPKLRDALSNVRFRGLASEFGLVNGQLQSFVFEIVNVVGNERRSVGFWTPK 69
           L  L +  +GPKL DALS V F+G+A  F L NG+L++  F+I+N+  +  R+VGFW  K
Sbjct: 355 LDELGVALSGPKLLDALSTVSFKGVAGRFQLKNGKLEATTFKIINIEESGERTVGFWKSK 414

Query: 70  AGLTTSLR-----HSGRKRELRPII 90
            GL  SLR     HS R+  LRPII
Sbjct: 415 VGLVKSLRVDKVSHSSRR--LRPII 437

[Close]
BLAST of CsaV3_6G022430 vs. Swiss-Prot
Match: sp|Q9C5V5|GLR28_ARATH (Glutamate receptor 2.8 OS=Arabidopsis thaliana OX=3702 GN=GLR2.8 PE=2 SV=2)

HSP 1 Score: 74.3 bits (181), Expect = 7.6e-13
Identity = 35/63 (55.56%), Postives = 43/63 (68.25%), Query Frame = 0 

Query: 10  LYNLDINENGPKLRDALSNVRFRGLASEFGLVNGQLQSFVFEIVNVVGNERRSVGFWTPK 69
           L  L ++  GP L +ALS +RF GLA  F L++ QL+S  FEI+N VGNE R VGFWTP 
Sbjct: 352 LGTLHVSRYGPSLLEALSEIRFNGLAGRFNLIDRQLESPKFEIINFVGNEERIVGFWTPS 411

Query: 70  AGL 73
            GL
Sbjct: 412 NGL 414

[Close]
BLAST of CsaV3_6G022430 vs. Swiss-Prot
Match: sp|Q9SHV1|GLR22_ARATH (Glutamate receptor 2.2 OS=Arabidopsis thaliana OX=3702 GN=GLR2.2 PE=2 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 2.9e-12
Identity = 35/72 (48.61%), Postives = 46/72 (63.89%), Query Frame = 0 

Query: 10  LYNLDINENGPKLRDALSNVRFRGLASEFGLVNGQLQSFVFEIVNVVGNERRSVGFWTPK 69
           L  L +++ GPKL   +S V+F+GLA +F  V+GQLQ  VFEIVN++G   RS+GFWT  
Sbjct: 346 LDGLGLSQFGPKLLQTVSTVQFKGLAGDFHFVSGQLQPSVFEIVNMIGTGERSIGFWTEG 405

Query: 70  AGLTTSLRHSGR 82
            GL   L    R
Sbjct: 406 NGLVKKLDQEPR 417

[Close]
BLAST of CsaV3_6G022430 vs. TrEMBL
Match: tr|A0A1S4DVF3|A0A1S4DVF3_CUCME (Glutamate receptor OS=Cucumis melo OX=3656 GN=LOC103488568 PE=3 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 1.6e-36
Identity = 77/89 (86.52%), Postives = 83/89 (93.26%), Query Frame = 0 

Query: 1   MKMNHSSNYLYNLDINENGPKLRDALSNVRFRGLASEFGLVNGQLQSFVFEIVNVVGNER 60
           MK N+SSNYLYNL IN+NGPKLR+ALSNVRFRGLA EF LVNGQLQSFVFEIVNV+GNER
Sbjct: 351 MKTNYSSNYLYNLGINQNGPKLREALSNVRFRGLAGEFSLVNGQLQSFVFEIVNVIGNER 410

Query: 61  RSVGFWTPKAGLTTSLRHSGRKRELRPII 90
           RSVGFWTPKAGLTTSLRHSG++  LRPII
Sbjct: 411 RSVGFWTPKAGLTTSLRHSGKESVLRPII 439

[Close]
BLAST of CsaV3_6G022430 vs. TrEMBL
Match: tr|A0A0A0KG62|A0A0A0KG62_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G309940 PE=4 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 3.9e-22
Identity = 54/54 (100.00%), Postives = 54/54 (100.00%), Query Frame = 0 

Query: 36  SEFGLVNGQLQSFVFEIVNVVGNERRSVGFWTPKAGLTTSLRHSGRKRELRPII 90
           SEFGLVNGQLQSFVFEIVNVVGNERRSVGFWTPKAGLTTSLRHSGRKRELRPII
Sbjct: 144 SEFGLVNGQLQSFVFEIVNVVGNERRSVGFWTPKAGLTTSLRHSGRKRELRPII 197

[Close]
BLAST of CsaV3_6G022430 vs. TrEMBL
Match: tr|A0A1S3BCC4|A0A1S3BCC4_CUCME (Glutamate receptor OS=Cucumis melo OX=3656 GN=LOC103488370 PE=3 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 8.1e-20
Identity = 54/89 (60.67%), Postives = 68/89 (76.40%), Query Frame = 0 

Query: 2   KMNHSSNYLYNLDINENGPKLRDALSNVRFRGLASEFGLVNGQLQSFVFEIVNVVGNERR 61
           KMN S+NYLY L +N+NG KLRDA SN++FRGLA EF L++GQLQS +FEIVNV GN RR
Sbjct: 369 KMN-STNYLYTLGVNQNGQKLRDAFSNLKFRGLAGEFSLIDGQLQSSLFEIVNVNGNGRR 428

Query: 62  SVGFWTPKAGLTTSLRHSGRK-RELRPII 90
           +VGFW+ ++GL   +  S R  + LR II
Sbjct: 429 NVGFWSAESGLRRKVEESERSAKGLRSII 456

[Close]
BLAST of CsaV3_6G022430 vs. TrEMBL
Match: tr|A0A1S4DVH3|A0A1S4DVH3_CUCME (glutamate receptor 2.2-like isoform X3 OS=Cucumis melo OX=3656 GN=LOC103488370 PE=3 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 8.1e-20
Identity = 54/89 (60.67%), Postives = 68/89 (76.40%), Query Frame = 0 

Query: 2   KMNHSSNYLYNLDINENGPKLRDALSNVRFRGLASEFGLVNGQLQSFVFEIVNVVGNERR 61
           KMN S+NYLY L +N+NG KLRDA SN++FRGLA EF L++GQLQS +FEIVNV GN RR
Sbjct: 378 KMN-STNYLYTLGVNQNGQKLRDAFSNLKFRGLAGEFSLIDGQLQSSLFEIVNVNGNGRR 437

Query: 62  SVGFWTPKAGLTTSLRHSGRK-RELRPII 90
           +VGFW+ ++GL   +  S R  + LR II
Sbjct: 438 NVGFWSAESGLRRKVEESERSAKGLRSII 465

[Close]
BLAST of CsaV3_6G022430 vs. TrEMBL
Match: tr|A0A1S3BD80|A0A1S3BD80_CUCME (Glutamate receptor OS=Cucumis melo OX=3656 GN=LOC103488370 PE=3 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 8.1e-20
Identity = 54/89 (60.67%), Postives = 68/89 (76.40%), Query Frame = 0 

Query: 2   KMNHSSNYLYNLDINENGPKLRDALSNVRFRGLASEFGLVNGQLQSFVFEIVNVVGNERR 61
           KMN S+NYLY L +N+NG KLRDA SN++FRGLA EF L++GQLQS +FEIVNV GN RR
Sbjct: 378 KMN-STNYLYTLGVNQNGQKLRDAFSNLKFRGLAGEFSLIDGQLQSSLFEIVNVNGNGRR 437

Query: 62  SVGFWTPKAGLTTSLRHSGRK-RELRPII 90
           +VGFW+ ++GL   +  S R  + LR II
Sbjct: 438 NVGFWSAESGLRRKVEESERSAKGLRSII 465

The following BLAST results are available for this feature:
BLAST of CsaV3_6G022430 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_011658435.13.8e-3798.75PREDICTED: LOW QUALITY PROTEIN: glutamate receptor 2.5-like, partial [Cucumis sa... [more]
XP_016899964.12.5e-3686.52PREDICTED: glutamate receptor 2.5-like [Cucumis melo][more]
XP_022951720.15.3e-2363.53glutamate receptor 2.5-like [Cucurbita moschata][more]
XP_023002214.15.3e-2363.53glutamate receptor 2.2-like [Cucurbita maxima][more]
XP_023537858.15.3e-2363.53glutamate receptor 2.2-like [Cucurbita pepo subsp. pepo][more]
BLAST of CsaV3_6G022430 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G29100.14.1e-1752.50glutamate receptor 2.9[more]
AT2G29120.15.0e-1548.61glutamate receptor 2.7[more]
AT5G11210.13.2e-1448.24glutamate receptor 2.5[more]
AT2G29110.14.2e-1455.56glutamate receptor 2.8[more]
AT2G24720.11.6e-1348.61glutamate receptor 2.2[more]
BLAST of CsaV3_6G022430 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|O81078|GLR29_ARATH7.3e-1652.50Glutamate receptor 2.9 OS=Arabidopsis thaliana OX=3702 GN=GLR2.9 PE=2 SV=1[more]
sp|Q8LGN0|GLR27_ARATH9.0e-1448.61Glutamate receptor 2.7 OS=Arabidopsis thaliana OX=3702 GN=GLR2.7 PE=2 SV=3[more]
sp|Q9LFN5|GLR25_ARATH5.8e-1348.24Glutamate receptor 2.5 OS=Arabidopsis thaliana OX=3702 GN=GLR2.5 PE=2 SV=2[more]
sp|Q9C5V5|GLR28_ARATH7.6e-1355.56Glutamate receptor 2.8 OS=Arabidopsis thaliana OX=3702 GN=GLR2.8 PE=2 SV=2[more]
sp|Q9SHV1|GLR22_ARATH2.9e-1248.61Glutamate receptor 2.2 OS=Arabidopsis thaliana OX=3702 GN=GLR2.2 PE=2 SV=1[more]
BLAST of CsaV3_6G022430 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S4DVF3|A0A1S4DVF3_CUCME1.6e-3686.52Glutamate receptor OS=Cucumis melo OX=3656 GN=LOC103488568 PE=3 SV=1[more]
tr|A0A0A0KG62|A0A0A0KG62_CUCSA3.9e-22100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G309940 PE=4 SV=1[more]
tr|A0A1S3BCC4|A0A1S3BCC4_CUCME8.1e-2060.67Glutamate receptor OS=Cucumis melo OX=3656 GN=LOC103488370 PE=3 SV=1[more]
tr|A0A1S4DVH3|A0A1S4DVH3_CUCME8.1e-2060.67glutamate receptor 2.2-like isoform X3 OS=Cucumis melo OX=3656 GN=LOC103488370 P... [more]
tr|A0A1S3BD80|A0A1S3BD80_CUCME8.1e-2060.67Glutamate receptor OS=Cucumis melo OX=3656 GN=LOC103488370 PE=3 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR028082Peripla_BP_I
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_6G022430.1CsaV3_6G022430.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3DG3DSA:3.40.50.2300coord: 49..72
e-value: 4.4E-6
score: 28.2
NoneNo IPR availableGENE3DG3DSA:3.40.50.2300coord: 12..48
e-value: 4.4E-6
score: 28.2
NoneNo IPR availablePANTHERPTHR43891FAMILY NOT NAMEDcoord: 5..81
NoneNo IPR availablePANTHERPTHR43891:SF10GLUTAMATE RECEPTOR 2.5-RELATEDcoord: 5..81
IPR028082Periplasmic binding protein-like ISUPERFAMILYSSF53822Periplasmic binding protein-like Icoord: 17..72

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_6G022430CSPI06G17060Wild cucumber (PI 183967)cpicucB365
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_6G022430Cucumber (Gy14) v2cgybcucB149
CsaV3_6G022430Cucumber (Gy14) v2cgybcucB298
CsaV3_6G022430Cucumber (Gy14) v1cgycucB396
CsaV3_6G022430Cucumber (Gy14) v1cgycucB505
CsaV3_6G022430Cucurbita maxima (Rimu)cmacucB0311
CsaV3_6G022430Cucurbita maxima (Rimu)cmacucB0450
CsaV3_6G022430Cucurbita maxima (Rimu)cmacucB1001
CsaV3_6G022430Cucurbita maxima (Rimu)cmacucB1074
CsaV3_6G022430Cucurbita moschata (Rifu)cmocucB0304
CsaV3_6G022430Cucurbita moschata (Rifu)cmocucB0442
CsaV3_6G022430Cucurbita moschata (Rifu)cmocucB0443
CsaV3_6G022430Cucurbita moschata (Rifu)cmocucB1056
CsaV3_6G022430Cucurbita pepo (Zucchini)cpecucB0175
CsaV3_6G022430Cucurbita pepo (Zucchini)cpecucB0404
CsaV3_6G022430Cucurbita pepo (Zucchini)cpecucB0780
CsaV3_6G022430Wild cucumber (PI 183967)cpicucB185
CsaV3_6G022430Bottle gourd (USVL1VR-Ls)cuclsiB425
CsaV3_6G022430Bottle gourd (USVL1VR-Ls)cuclsiB492
CsaV3_6G022430Melon (DHL92) v3.5.1cucmeB447
CsaV3_6G022430Melon (DHL92) v3.5.1cucmeB509
CsaV3_6G022430Melon (DHL92) v3.6.1cucmedB439
CsaV3_6G022430Melon (DHL92) v3.6.1cucmedB497
CsaV3_6G022430Watermelon (Charleston Gray)cucwcgB494
CsaV3_6G022430Watermelon (Charleston Gray)cucwcgB498
CsaV3_6G022430Watermelon (97103) v1cucwmB522
CsaV3_6G022430Watermelon (97103) v1cucwmB563
CsaV3_6G022430Watermelon (97103) v2cucwmbB483
CsaV3_6G022430Watermelon (97103) v2cucwmbB488
CsaV3_6G022430Wax gourdcucwgoB564
CsaV3_6G022430Wax gourdcucwgoB576
CsaV3_6G022430Cucumber (Chinese Long) v3cuccucB148
CsaV3_6G022430Silver-seed gourdcarcucB0085
CsaV3_6G022430Silver-seed gourdcarcucB0086
CsaV3_6G022430Silver-seed gourdcarcucB0310
CsaV3_6G022430Silver-seed gourdcarcucB0742