CsaV3_6G018590 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGTAAAGAAGAGTTCTTAAAGATCCAGGTAACCCCTTTTTCTCTATCCCCATTTTCCTTTTCTTTTTTCTTTTTCTTTTTCTTTATATTTTGTTACATTAAATATGAAATCCCAGTTTGGATTTGTGAAAAAAAAATGATGGTTTTAGTTCTATATGTTGATCAGACTTGTGCTCTGTTTTTTGGGTTTTTTTTTTTTTCCGTTTTGTTTTGTTTTTTCAGAAATGTGTTCTTAAAGTGAACATACACTGTGATGGGTGTAAGCAGAAAGTTAAGAAAATCTTGCAGAAAATCGATGGTGGGTTCTTTCTCTCTCTCTGTTTTCGCTTCAATTTCTTGTTCTTTGTGTGTGTGTGTGTGTGTGTGTGTTTTGTTAATGGTGGTTCTTTTGTTGTGTCGTTGATTCTAGGGGTTTTCACTACGGAAATAGATGCAGAGCTAGGGAAGGTAACAGTTTCTGGAAATGTAGACGCTGCTACTTTAATTAAAAAGCTCTCGAAATCAGGAAAATATGCTGAGCTTTGGGGAGCTCCGAAGGTTAATCCAAATAATAACAATGGCGGCCATCAGAACCATCTTGTCAATCAGATGAAGAATTTGCAGATTGATAATGGTAAAAATGGGGGTAATAATAATAAACAGGGGCCTCCAAAGGGTGGGAACAATCAGCCGAAATTGGGCGGCGGAGGCGGTGGTGGTGGTGGTGGGGGTGGGCCACCGCAGATTCTGCCGCAGCAGCTTCAACAGCTGCAGCAATTACAGCAACAAATGAATGGGTTTCCGTTTCAAGATCCGAAAATGTTACCACCGCAGTTGAAGGGTATGAAAATGCCACCGTTTAAAGATCCGATTCCGGCGAATCAGAAGGCAGTGAAGTTCGATTTGCCGGAGGATGGTGATCTGACCGATGATGATGATTTTTATGAAGATGATGATGATGATGAATTTGATGAAGATGATGATCTCGAAGATGACTTGGATGATATTCCTCTTCCTCCGAATAAAATGAAGACGTTTGTGGGTGGTACCGGCGCAGGCGCCGTTGCTGGAGGCGGAGGTCAGATGCCGAACTTGATGGTGTTGAATGGGATGAATGGGAATATGAATATGCAGCAACTGATTAATGCTCAGAAGGCTGCTGCTAATGGAGCTGATAAGAAGGGCGGTGGAGTTGGCGGTGGCGGTGGCGGTGGCGGTGGCGGAGCTATGCCAATGCCCATATCAATTAATGGAATGGGTGGTGGAAACAATGACGGCAAAGGCGGTAATGGAGGGAAGAAAGGCGGTCCCGGCGGCGGTGGTGGTGGCGCTGGCGGGGGCGGTGGGAATCACAATCTTGGCGGTGGTGGCAAAAATGTCGGCAAGAACGGTAATAATAATGGTGGAGTTCAAAAGAACGGCGGTATTAACGGCGGTGGGGTGGTCCAATTAATAATGGCAACGGCGGGAAGAAGCCCGGTGGCGAAATGCCTCACGTAA ATGAGTAAAGAAGAGTTCTTAAAGATCCAGAAATGTGTTCTTAAAGTGAACATACACTGTGATGGGTGTAAGCAGAAAGTTAAGAAAATCTTGCAGAAAATCGATGGGGTTTTCACTACGGAAATAGATGCAGAGCTAGGGAAGGTAACAGTTTCTGGAAATGTAGACGCTGCTACTTTAATTAAAAAGCTCTCGAAATCAGGAAAATATGCTGAGCTTTGGGGAGCTCCGAAGGTTAATCCAAATAATAACAATGGCGGCCATCAGAACCATCTTGTCAATCAGATGAAGAATTTGCAGATTGATAATGGTAAAAATGGGGGTAATAATAATAAACAGGGGCCTCCAAAGGGTGGGAACAATCAGCCGAAATTGGGCGGCGGAGGCGGTGGTGGTGGTGGTGGGGGTGGGCCACCGCAGATTCTGCCGCAGCAGCTTCAACAGCTGCAGCAATTACAGCAACAAATGAATGGGTTTCCGTTTCAAGATCCGAAAATGTTACCACCGCAGTTGAAGGGTATGAAAATGCCACCGTTTAAAGATCCGATTCCGGCGAATCAGAAGGCAGTGAAGTTCGATTTGCCGGAGGATGGTGATCTGACCGATGATGATGATTTTTATGAAGATGATGATGATGATGAATTTGATGAAGATGATGATCTCGAAGATGACTTGGATGATATTCCTCTTCCTCCGAATAAAATGAAGACGTTTGTGGGTGGTACCGGCGCAGGCGCCGTTGCTGGAGGCGGAGGTCAGATGCCGAACTTGATGGTGTTGAATGGGATGAATGGGAATATGAATATGCAGCAACTGATTAATGCTCAGAAGGCTGCTGCTAATGGAGCTGATAAGAAGGGCGGTGGAGTTGGCGGTGGCGGTGGCGGTGGCGGTGGCGGAGCTATGCCAATGCCCATATCAATTAATGGAATGGGTGGTGGAAACAATGACGGCAAAGGCGGTAATGGAGGGAAGAAAGGCGGTCCCGGCGGCGGTGGTGGTGGCGCTGGCGGGGGCGGTGGGAATCACAATCTTGGCGGTGGTGGCAAAAATGTCGGCAAGAACGGTAATAATAATGGTGGAGTTCAAAAGAACGGCGGTATTAACGGCGGTGGGGTGGTCCAATTAATAATGGCAACGGCGGGAAGAAGCCCGGTGGCGAAATGCCTCACGTAA ATGAGTAAAGAAGAGTTCTTAAAGATCCAGAAATGTGTTCTTAAAGTGAACATACACTGTGATGGGTGTAAGCAGAAAGTTAAGAAAATCTTGCAGAAAATCGATGGGGTTTTCACTACGGAAATAGATGCAGAGCTAGGGAAGGTAACAGTTTCTGGAAATGTAGACGCTGCTACTTTAATTAAAAAGCTCTCGAAATCAGGAAAATATGCTGAGCTTTGGGGAGCTCCGAAGGTTAATCCAAATAATAACAATGGCGGCCATCAGAACCATCTTGTCAATCAGATGAAGAATTTGCAGATTGATAATGGTAAAAATGGGGGTAATAATAATAAACAGGGGCCTCCAAAGGGTGGGAACAATCAGCCGAAATTGGGCGGCGGAGGCGGTGGTGGTGGTGGTGGGGGTGGGCCACCGCAGATTCTGCCGCAGCAGCTTCAACAGCTGCAGCAATTACAGCAACAAATGAATGGGTTTCCGTTTCAAGATCCGAAAATGTTACCACCGCAGTTGAAGGGTATGAAAATGCCACCGTTTAAAGATCCGATTCCGGCGAATCAGAAGGCAGTGAAGTTCGATTTGCCGGAGGATGGTGATCTGACCGATGATGATGATTTTTATGAAGATGATGATGATGATGAATTTGATGAAGATGATGATCTCGAAGATGACTTGGATGATATTCCTCTTCCTCCGAATAAAATGAAGACGTTTGTGGGTGGTACCGGCGCAGGCGCCGTTGCTGGAGGCGGAGGTCAGATGCCGAACTTGATGGTGTTGAATGGGATGAATGGGAATATGAATATGCAGCAACTGATTAATGCTCAGAAGGCTGCTGCTAATGGAGCTGATAAGAAGGGCGGTGGAGTTGGCGGTGGCGGTGGCGGTGGCGGTGGCGGAGCTATGCCAATGCCCATATCAATTAATGGAATGGGTGGTGGAAACAATGACGGCAAAGGCGGTAATGGAGGGAAGAAAGGCGGTCCCGGCGGCGGTGGTGGTGGCGCTGGCGGGGGCGGTGGGAATCACAATCTTGGCGGTGGTGGCAAAAATGTCGGCAAGAACGGTAATAATAATGGTGGAGTTCAAAAGAACGGCGGTATTAACGGCGGTGGGGTGGTCCAATTAATAATGGCAACGGCGGGAAGAAGCCCGGTGGCGAAATGCCTCACGTAA MSKEEFLKIQKCVLKVNIHCDGCKQKVKKILQKIDGVFTTEIDAELGKVTVSGNVDAATLIKKLSKSGKYAELWGAPKVNPNNNNGGHQNHLVNQMKNLQIDNGKNGGNNNKQGPPKGGNNQPKLGGGGGGGGGGGGPPQILPQQLQQLQQLQQQMNGFPFQDPKMLPPQLKGMKMPPFKDPIPANQKAVKFDLPEDGDLTDDDDFYEDDDDDEFDEDDDLEDDLDDIPLPPNKMKTFVGGTGAGAVAGGGGQMPNLMVLNGMNGNMNMQQLINAQKAAANGADKKGGGVGGGGGGGGGGAMPMPISINGMGGGNNDGKGGNGGKKGGPGGGGGGAGGGGGNHNLGGGGKNVGKNGNNNGGVQKNGGINGGGVVQLIMATAGRSPVAKCLT
BLAST of CsaV3_6G018590 vs. NCBI nr
Match: XP_011657200.1 (PREDICTED: RNA-binding protein cabeza-like [Cucumis sativus] >KGN47259.1 hypothetical protein Csa_6G237620 [Cucumis sativus]) HSP 1 Score: 367.5 bits (942), Expect = 5.8e-98 Identity = 278/278 (100.00%), Postives = 278/278 (100.00%), Query Frame = 0
BLAST of CsaV3_6G018590 vs. NCBI nr
Match: XP_008458557.1 (PREDICTED: RNA-binding protein cabeza-like [Cucumis melo] >XP_016902304.1 PREDICTED: RNA-binding protein cabeza-like [Cucumis melo]) HSP 1 Score: 281.6 bits (719), Expect = 4.2e-72 Identity = 239/287 (83.28%), Postives = 243/287 (84.67%), Query Frame = 0
BLAST of CsaV3_6G018590 vs. NCBI nr
Match: XP_023548307.1 (heavy metal-associated isoprenylated plant protein 33-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 267.3 bits (682), Expect = 8.1e-68 Identity = 221/248 (89.11%), Postives = 224/248 (90.32%), Query Frame = 0
BLAST of CsaV3_6G018590 vs. NCBI nr
Match: XP_023006218.1 (heavy metal-associated isoprenylated plant protein 33-like [Cucurbita maxima]) HSP 1 Score: 263.1 bits (671), Expect = 1.5e-66 Identity = 222/245 (90.61%), Postives = 226/245 (92.24%), Query Frame = 0
BLAST of CsaV3_6G018590 vs. NCBI nr
Match: XP_022930298.1 (heavy metal-associated isoprenylated plant protein 33-like [Cucurbita moschata]) HSP 1 Score: 220.7 bits (561), Expect = 8.7e-54 Identity = 157/197 (79.70%), Postives = 170/197 (86.29%), Query Frame = 0
BLAST of CsaV3_6G018590 vs. TAIR10
Match: AT5G19090.1 (Heavy metal transport/detoxification superfamily protein ) HSP 1 Score: 152.5 bits (384), Expect = 5.3e-37 Identity = 184/266 (69.17%), Postives = 201/266 (75.56%), Query Frame = 0
BLAST of CsaV3_6G018590 vs. TAIR10
Match: AT3G06130.1 (Heavy metal transport/detoxification superfamily protein ) HSP 1 Score: 149.1 bits (375), Expect = 5.9e-36 Identity = 74/103 (71.84%), Postives = 88/103 (85.44%), Query Frame = 0
BLAST of CsaV3_6G018590 vs. TAIR10
Match: AT3G05220.1 (Heavy metal transport/detoxification superfamily protein ) HSP 1 Score: 106.7 bits (265), Expect = 3.3e-23 Identity = 47/75 (62.67%), Postives = 64/75 (85.33%), Query Frame = 0
BLAST of CsaV3_6G018590 vs. TAIR10
Match: AT1G23000.1 (Heavy metal transport/detoxification superfamily protein ) HSP 1 Score: 96.3 bits (238), Expect = 4.5e-20 Identity = 52/87 (59.77%), Postives = 66/87 (75.86%), Query Frame = 0
BLAST of CsaV3_6G018590 vs. TAIR10
Match: AT5G27690.1 (Heavy metal transport/detoxification superfamily protein ) HSP 1 Score: 90.1 bits (222), Expect = 3.2e-18 Identity = 45/81 (55.56%), Postives = 59/81 (72.84%), Query Frame = 0
BLAST of CsaV3_6G018590 vs. Swiss-Prot
Match: sp|F4JZL7|HIP33_ARATH (Heavy metal-associated isoprenylated plant protein 33 OS=Arabidopsis thaliana OX=3702 GN=HIPP33 PE=2 SV=1) HSP 1 Score: 152.5 bits (384), Expect = 9.6e-36 Identity = 184/266 (69.17%), Postives = 201/266 (75.56%), Query Frame = 0
BLAST of CsaV3_6G018590 vs. Swiss-Prot
Match: sp|Q9M8K5|HIP32_ARATH (Heavy metal-associated isoprenylated plant protein 32 OS=Arabidopsis thaliana OX=3702 GN=HIPP32 PE=2 SV=1) HSP 1 Score: 149.1 bits (375), Expect = 1.1e-34 Identity = 74/103 (71.84%), Postives = 88/103 (85.44%), Query Frame = 0
BLAST of CsaV3_6G018590 vs. Swiss-Prot
Match: sp|Q0WV37|HIP34_ARATH (Heavy metal-associated isoprenylated plant protein 34 OS=Arabidopsis thaliana OX=3702 GN=HIPP34 PE=2 SV=1) HSP 1 Score: 106.7 bits (265), Expect = 6.0e-22 Identity = 47/75 (62.67%), Postives = 64/75 (85.33%), Query Frame = 0
BLAST of CsaV3_6G018590 vs. Swiss-Prot
Match: sp|A2RVM8|HIP37_ARATH (Heavy metal-associated isoprenylated plant protein 37 OS=Arabidopsis thaliana OX=3702 GN=HIPP37 PE=2 SV=1) HSP 1 Score: 96.3 bits (238), Expect = 8.1e-19 Identity = 52/87 (59.77%), Postives = 66/87 (75.86%), Query Frame = 0
BLAST of CsaV3_6G018590 vs. Swiss-Prot
Match: sp|Q84J88|HIP36_ARATH (Heavy metal-associated isoprenylated plant protein 36 OS=Arabidopsis thaliana OX=3702 GN=HIPP36 PE=2 SV=1) HSP 1 Score: 90.1 bits (222), Expect = 5.8e-17 Identity = 45/81 (55.56%), Postives = 59/81 (72.84%), Query Frame = 0
BLAST of CsaV3_6G018590 vs. TrEMBL
Match: tr|A0A0A0KEJ8|A0A0A0KEJ8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G237620 PE=4 SV=1) HSP 1 Score: 367.5 bits (942), Expect = 3.8e-98 Identity = 278/278 (100.00%), Postives = 278/278 (100.00%), Query Frame = 0
BLAST of CsaV3_6G018590 vs. TrEMBL
Match: tr|A0A1S3C7N5|A0A1S3C7N5_CUCME (RNA-binding protein cabeza-like OS=Cucumis melo OX=3656 GN=LOC103497926 PE=4 SV=1) HSP 1 Score: 281.6 bits (719), Expect = 2.8e-72 Identity = 239/287 (83.28%), Postives = 243/287 (84.67%), Query Frame = 0
BLAST of CsaV3_6G018590 vs. TrEMBL
Match: tr|M5XG38|M5XG38_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G151700 PE=4 SV=1) HSP 1 Score: 179.5 bits (454), Expect = 1.5e-41 Identity = 193/290 (66.55%), Postives = 210/290 (72.41%), Query Frame = 0
BLAST of CsaV3_6G018590 vs. TrEMBL
Match: tr|A0A251QXY0|A0A251QXY0_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G151700 PE=4 SV=1) HSP 1 Score: 174.9 bits (442), Expect = 3.6e-40 Identity = 150/211 (71.09%), Postives = 160/211 (75.83%), Query Frame = 0
BLAST of CsaV3_6G018590 vs. TrEMBL
Match: tr|I1M143|I1M143_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100811318 PE=4 SV=2) HSP 1 Score: 165.2 bits (417), Expect = 2.9e-37 Identity = 84/103 (81.55%), Postives = 90/103 (87.38%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|