CsaV3_6G017290 (gene) Cucumber (Chinese Long) v3

NameCsaV3_6G017290
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr6 : 12826302 .. 12826529 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AAATCTTCGATAGCTTCAGGTTCCATGCCATCAGGAAGATATAAAAAGTATAGACCACAACAACAACAACATCATGAATTGCGATTCCAACTTCGAAACCAATCATTATCTGACACACGAGCAACATCAACATATTCATTTTATGACTTGACACAGAAGGGCATCAACGACACACTTCACAAGAGCTTGAAGCATGATCCACGATTTGAGGCACTCCTTACTGACTGA

mRNA sequence

AAATCTTCGATAGCTTCAGGTTCCATGCCATCAGGAAGATATAAAAAGTATAGACCACAACAACAACAACATCATGAATTGCGATTCCAACTTCGAAACCAATCATTATCTGACACACGAGCAACATCAACATATTCATTTTATGACTTGACACAGAAGGGCATCAACGACACACTTCACAAGAGCTTGAAGCATGATCCACGATTTGAGGCACTCCTTACTGACTGA

Coding sequence (CDS)

AAATCTTCGATAGCTTCAGGTTCCATGCCATCAGGAAGATATAAAAAGTATAGACCACAACAACAACAACATCATGAATTGCGATTCCAACTTCGAAACCAATCATTATCTGACACACGAGCAACATCAACATATTCATTTTATGACTTGACACAGAAGGGCATCAACGACACACTTCACAAGAGCTTGAAGCATGATCCACGATTTGAGGCACTCCTTACTGACTGA

Protein sequence

KSSIASGSMPSGRYKKYRPQQQQHHELRFQLRNQSLSDTRATSTYSFYDLTQKGINDTLHKSLKHDPRFEALLTD
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_6G017290.1CsaV3_6G017290.1mRNA


Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..24

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_6G017290Watermelon (97103) v2cucwmbB485
CsaV3_6G017290Watermelon (97103) v2cucwmbB489
CsaV3_6G017290Wax gourdcucwgoB554
CsaV3_6G017290Wax gourdcucwgoB577
CsaV3_6G017290Cucumber (Chinese Long) v3cuccucB150
CsaV3_6G017290Silver-seed gourdcarcucB0088
CsaV3_6G017290Silver-seed gourdcarcucB0743
CsaV3_6G017290Cucumber (Gy14) v2cgybcucB153
CsaV3_6G017290Cucumber (Gy14) v2cgybcucB298
CsaV3_6G017290Cucumber (Gy14) v1cgycucB275
CsaV3_6G017290Cucumber (Gy14) v1cgycucB397
CsaV3_6G017290Cucurbita maxima (Rimu)cmacucB0453
CsaV3_6G017290Cucurbita maxima (Rimu)cmacucB0999
CsaV3_6G017290Cucurbita maxima (Rimu)cmacucB1076
CsaV3_6G017290Cucurbita moschata (Rifu)cmocucB0306
CsaV3_6G017290Cucurbita moschata (Rifu)cmocucB0446
CsaV3_6G017290Cucurbita moschata (Rifu)cmocucB0986
CsaV3_6G017290Cucurbita moschata (Rifu)cmocucB1058
CsaV3_6G017290Cucurbita pepo (Zucchini)cpecucB0177
CsaV3_6G017290Cucurbita pepo (Zucchini)cpecucB0407
CsaV3_6G017290Cucurbita pepo (Zucchini)cpecucB0783
CsaV3_6G017290Cucurbita pepo (Zucchini)cpecucB1073
CsaV3_6G017290Wild cucumber (PI 183967)cpicucB188
CsaV3_6G017290Wild cucumber (PI 183967)cpicucB364
CsaV3_6G017290Bottle gourd (USVL1VR-Ls)cuclsiB426
CsaV3_6G017290Bottle gourd (USVL1VR-Ls)cuclsiB494
CsaV3_6G017290Melon (DHL92) v3.5.1cucmeB450
CsaV3_6G017290Melon (DHL92) v3.5.1cucmeB510
CsaV3_6G017290Melon (DHL92) v3.6.1cucmedB441
CsaV3_6G017290Melon (DHL92) v3.6.1cucmedB498
CsaV3_6G017290Watermelon (Charleston Gray)cucwcgB499
CsaV3_6G017290Watermelon (97103) v1cucwmB523
CsaV3_6G017290Watermelon (97103) v1cucwmB566