CsaV3_6G017180 (gene) Cucumber (Chinese Long) v3

NameCsaV3_6G017180
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr6 : 12759743 .. 12759996 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTTTCGGGTAATGCTCTATTGGCTTGGAACATTCGTTATACATTGAGGAGTTTTGGTTTGTTTGTTGTTAAGGCTCCCATGTTGTATAAGGTGGTGAGTTAGTCGAGTCATGGGATTGTGGTCTCCTTCTCGTTTTAATCATTGGAAGATAAAATGTTGATGTCTCACTGGTCGATTGTGTTGAGTATGGTGGTATCAACTGGGTTGCCTGTGACTCTGTTGGGTCTCTCATTCTTGTTGTGTGTGAATAG

mRNA sequence

ATGTTTTCGGGTAATGCTCTATTGGCTTGGAACATTCGTTATACATTGAGGAGTTTTGGTTTGTTTGTTGTTAAGGCTCCCATGTTGTATAAGGTGTATGGTGGTATCAACTGGGTTGCCTGTGACTCTGTTGGGTCTCTCATTCTTGTTGTGTGTGAATAG

Coding sequence (CDS)

ATGTTTTCGGGTAATGCTCTATTGGCTTGGAACATTCGTTATACATTGAGGAGTTTTGGTTTGTTTGTTGTTAAGGCTCCCATGTTGTATAAGGTGTATGGTGGTATCAACTGGGTTGCCTGTGACTCTGTTGGGTCTCTCATTCTTGTTGTGTGTGAATAG

Protein sequence

MFSGNALLAWNIRYTLRSFGLFVVKAPMLYKVYGGINWVACDSVGSLILVVCE
BLAST of CsaV3_6G017180 vs. NCBI nr
Match: KGN47179.1 (hypothetical protein Csa_6G194140 [Cucumis sativus])

HSP 1 Score: 112.5 bits (280), Expect = 4.6e-22
Identity = 53/53 (100.00%), Postives = 53/53 (100.00%), Query Frame = 0

Query: 1  MFSGNALLAWNIRYTLRSFGLFVVKAPMLYKVYGGINWVACDSVGSLILVVCE 54
          MFSGNALLAWNIRYTLRSFGLFVVKAPMLYKVYGGINWVACDSVGSLILVVCE
Sbjct: 1  MFSGNALLAWNIRYTLRSFGLFVVKAPMLYKVYGGINWVACDSVGSLILVVCE 53

BLAST of CsaV3_6G017180 vs. TrEMBL
Match: tr|A0A0A0KEB3|A0A0A0KEB3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G194140 PE=4 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 3.1e-22
Identity = 53/53 (100.00%), Postives = 53/53 (100.00%), Query Frame = 0

Query: 1  MFSGNALLAWNIRYTLRSFGLFVVKAPMLYKVYGGINWVACDSVGSLILVVCE 54
          MFSGNALLAWNIRYTLRSFGLFVVKAPMLYKVYGGINWVACDSVGSLILVVCE
Sbjct: 1  MFSGNALLAWNIRYTLRSFGLFVVKAPMLYKVYGGINWVACDSVGSLILVVCE 53

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KGN47179.14.6e-22100.00hypothetical protein Csa_6G194140 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A0A0KEB3|A0A0A0KEB3_CUCSA3.1e-22100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G194140 PE=4 SV=1[more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_6G017180.1CsaV3_6G017180.1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None