CsaV3_6G016710 (gene) Cucumber (Chinese Long) v3

NameCsaV3_6G016710
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr6 : 12515222 .. 12518430 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTTAGCCTTCCTCTCCGGCAACACTCCAGCGGCCATAGCCGTAAGGCGGCGAAGACTGAACCATTTTTGTAGTCAACCTTTACTCGCGAACCTGGCTTGCACTGTGAGCACGACTCCGGGCTTTCGAACCATTGTTTCTTCTCCGTTTGAGACTCCAACGTGAACAAGTTGTGCACTACGTTTTCGACGACTGGGTATCTTGCAGCAGGGTTTTTGATTTGGGAGTAAGCTTTCAACTGCTATCCTCACTTCGTTTGGCTTCAAATCTGTTTACCATATCATTTACGGTCCAGTTTTGCAAGTTTGGACGTTTTCAGACATCAATCAGCAAGGATTGGAGCGTTTTTTTTTTTTTTTTTTTTTATAACGTTCGGTAAGGATTATTACTTTAGTTTCCTTTTGAAACTCTTTTGTTGTTGTGTTTGGGTCAATTTTTAAGTATTCGATTAAGGTTTAGCAAGGTTGAACATGCTTCAGACTCGATTAGCATGCCTTAGATCAGTTTTTGAGTTCTGAAACTTTGTTGGTTGCAGTTTTGGGTTAATTCAAAGTGATTAATCAAAGTTTGTTCTGGATTTTTTATGAGAATATTCTTGCTGAAAATCTTTGGGTATAAAAAAGGTTTTCGAATTGAGTTATAACACTTAAAACGTTAGATTTTAAAAGTATACGTTCGTTCAAGGGAGTGATTTTCAGATTGAGAATGGTAGATTGTTCATAGAGGTAAGTAGTTTCCACATTTGTTCTACTATGTAAGTTTTGATAAAGATACGTTTTGACTGTTGTGATTTGATAAATGGTTGAAAGTGTTTTTGGAATTTTAGAAATATGTTTCGTATCATTTAACCATCATAGGTTGGCCTAGTGGTAAAAAAGGACGGAGTCTCAATAACTAACTATGAAGTCATGAATTCAAGCCACCTACCTAGTAGTTAATTTCCTATGAGTTTCTTTGACACCCAAATGTCGTAGGTTCAAGCAGGTTGTCCTATGTGATTAGTCGAGGTGCATATACGTTGGTCCGAACACATACGGTATAGAAGAAAAAGAAATATGTTTTGTACCATTTGAAACAGATGAATTTGTTTTGGATGATTTAAATATTTTCCTAATAGAAAAATGCTTCATGTGACTTGAGAATCGATTAAAAGTATTTGGTATATTTTTAGTTGATTTTGTGAAGTAAAAGCACTTGACTATTTCGAATGATAATTGGCAATGTGATTTTGATTTGAAAATTTCCTATTTGAATGGTTTGGTTTGATCAGTTTTGTTTCCAAATTGCTATTTGGAGCTACATGTTTTGTTTCATATATTTTTGAATGATTCAATTGAAGCTATTTGGATATGCCCATTTTTTCGTTTTGGAGATTGCATGGTATTTTGTTGTAGCCAGTGTTTTAAAATGCCTAAGGCGCACTAAGGCCCAATGGCCCTTTGGAGCCTAGGCGCAAGTTTTTTATACGTGAGGTGCTATATATATAAAAATAAATATATGTATATATGCCCTATATACATGTTTATTTACACTAAGGTATTAACATCTTGCTCATTTTGCAATCAAGCATATTTCCATGCTGGATCTTTTCTTAAACTGTACGCAGCCATCTAATTACTTAAAAAATTAAACTAATTAGAACCTAACTTAAGAAATTGATCACAGAAGTTAGGAGTTAACTTGGGATATACCAAAAAGTTGAAGCCTTAAATGGTTGCTTTTTTTCACCCTTCTCTGTTTTTTGAAGAAACACAAAGAATAGACATAAAAAACAGAGCCAAGGAGCTGTTTTTTTTTTTTTAAAGATAGACTTCAAAAAGTCTTCAAAAGAGGTGCCTGTTGGAGAAGAAAAAGAAGAAGAGGAGGAGGCAAGGAGGTGTTCACTCTTCTGTCTTTCCTTTTGTTGAAGAAGAAAATGAAAAAGAAGGAGTGCCGAGAAGGGGAAGGAGAGTAGGAGACATGTACCGTTTTCTACTTGTAGATGAAGCCACTGCCTACTTTATTTCGAATTAGGATGAGAAAAATATAAATATATTATATTATATATTAAATGACAGCATTTTAAAAGATTTGTTTAAAAAAAAAACCCTCGGTGCTTTGGGAAAGGTGCAAAAAGGCACATGCCTTCTTCACTGTCCCTTGCCTATCCAAGGCGAGGTGCTCAGGTTGAGCCTTGCGCCTAAGCAAGCAACTGACCGCAATTTTCAAAACACTGGTTGTAGCCAGATTTGGAATTGACGATATCTGTATGTCTGCTTTTTATTTGTGAGAAATCACATTTTTGTTGTTTGTCATTCCTTCAAATTAAGATTATGTGCGTTTTGCATTCACATGGTAATTTGATTGATGTTGTGGTTGGTTGTTAATTGACATTTCTGTTCTGGTTGAAGGTTGATTGTTCATCAACATTTTTGACTGGCTGTTGTTATAGATGACTAACCATATATGTTAAGCTCCTTCAACTGCGCATCTTTCTTACTCTCTATCTGAAAGTATTGAATGATTGCAAGCTGTTGTATAAACTATTGACTGATTGAGAGTTCGGTGTGATTGAAAGTATTGACTGATTGAAAATATTTTAATTGTATGTATCGAAAGACTAGTGTTTTAAGAAGTATGAAAGTTACGTTTATTAGATTAAAGGTGTTGAAAGTTTAGCGAACATTTTGGTTTTGGTGAAAGAATACTTGAAAGTTTCAGCTTGAAACATTGGTTTTGAAGTTTTATTTGCTTGGAAGATCTTGATTTCAAAAGTATTGTTTGTAGCAAAGTTTTGACTGAAAGTTTTGGATTTTTATTTTCAAAAGTTCTGAAAGGCAATGAATTACAAAGCTTGATATGGGAATTGCTTATTGTCTATTTTCTGCTCATCTTTGTTTTTCCAAAATGCTTTTAGATGAAGGTCGGCGTCCTGCAAAGGATGTCTCTTAGGATTTGATATTTTGTCTTAGAAATTGTTTGCTTTCCCTGTAATGTTTAAGTTGTAAAAGCTCCTAATTGTTATGTTTTCCGTTCTTTTTTTTTCCTCTCCTCCTCCCTTCTCTCTTTGTTGTAATAGTTGTACTAGACAAAACGGACTGTTACAGATTTAGTGTGGATTAGAGAGTATATTAGGTAGTTAAATTGAGTGTTGGTTTTGATATACCCTTCTTTCCTGGCTGCAGGCACAAATTACAGAAAGTGTTTGAAGGTTGTGCGCGCTTGCTAA

mRNA sequence

GCTTTCAACTGCTATCCTCACTTCGTTTGGCTTCAAATCTGTTTACCATATCATTTACGGTCCAGTTTTGCAAGTTTGGACGTTTTCAGACATCAATCAGCAAGGATTGGAGCGTTTTTTTTTTTTTTTTTTTTTATAACGTTCGGCACAAATTACAGAAAGTGTTTGAAGGTTGTGCGCGCTTGCTAA

Coding sequence (CDS)

GCTTTCAACTGCTATCCTCACTTCGTTTGGCTTCAAATCTGTTTACCATATCATTTACGGTCCAGTTTTGCAAGTTTGGACGTTTTCAGACATCAATCAGCAAGGATTGGAGCGTTTTTTTTTTTTTTTTTTTTTATAACGTTCGGCACAAATTACAGAAAGTGTTTGAAGGTTGTGCGCGCTTGCTAA

Protein sequence

AFNCYPHFVWLQICLPYHLRSSFASLDVFRHQSARIGAFFFFFFFITFGTNYRKCLKVVRAC
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_6G016710.1CsaV3_6G016710.1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_6G016710Cucumber (Chinese Long) v3cuccucB049
CsaV3_6G016710Cucumber (Chinese Long) v3cuccucB142
CsaV3_6G016710Cucumber (Chinese Long) v3cuccucB182
CsaV3_6G016710Cucumber (Chinese Long) v3cuccucB207
CsaV3_6G016710Silver-seed gourdcarcucB0107
CsaV3_6G016710Silver-seed gourdcarcucB0188
CsaV3_6G016710Silver-seed gourdcarcucB0340
CsaV3_6G016710Silver-seed gourdcarcucB0374
CsaV3_6G016710Silver-seed gourdcarcucB0416
CsaV3_6G016710Silver-seed gourdcarcucB0477
CsaV3_6G016710Silver-seed gourdcarcucB1044
CsaV3_6G016710Cucumber (Gy14) v2cgybcucB048
CsaV3_6G016710Cucumber (Gy14) v2cgybcucB192
CsaV3_6G016710Cucumber (Gy14) v2cgybcucB298
CsaV3_6G016710Cucumber (Gy14) v1cgycucB062
CsaV3_6G016710Cucumber (Gy14) v1cgycucB158
CsaV3_6G016710Cucumber (Gy14) v1cgycucB209
CsaV3_6G016710Cucumber (Gy14) v1cgycucB286
CsaV3_6G016710Cucurbita maxima (Rimu)cmacucB0264
CsaV3_6G016710Cucurbita maxima (Rimu)cmacucB0312
CsaV3_6G016710Cucurbita maxima (Rimu)cmacucB0582
CsaV3_6G016710Cucurbita maxima (Rimu)cmacucB0665
CsaV3_6G016710Cucurbita maxima (Rimu)cmacucB0740
CsaV3_6G016710Cucurbita maxima (Rimu)cmacucB0998
CsaV3_6G016710Cucurbita maxima (Rimu)cmacucB1038
CsaV3_6G016710Cucurbita moschata (Rifu)cmocucB0253
CsaV3_6G016710Cucurbita moschata (Rifu)cmocucB0307
CsaV3_6G016710Cucurbita moschata (Rifu)cmocucB0571
CsaV3_6G016710Cucurbita moschata (Rifu)cmocucB0650
CsaV3_6G016710Cucurbita moschata (Rifu)cmocucB0729
CsaV3_6G016710Cucurbita moschata (Rifu)cmocucB0983
CsaV3_6G016710Cucurbita moschata (Rifu)cmocucB1022
CsaV3_6G016710Cucurbita pepo (Zucchini)cpecucB0359
CsaV3_6G016710Cucurbita pepo (Zucchini)cpecucB0565
CsaV3_6G016710Cucurbita pepo (Zucchini)cpecucB0566
CsaV3_6G016710Cucurbita pepo (Zucchini)cpecucB0620
CsaV3_6G016710Cucurbita pepo (Zucchini)cpecucB0653
CsaV3_6G016710Cucurbita pepo (Zucchini)cpecucB0721
CsaV3_6G016710Cucurbita pepo (Zucchini)cpecucB0781
CsaV3_6G016710Cucurbita pepo (Zucchini)cpecucB0933
CsaV3_6G016710Cucurbita pepo (Zucchini)cpecucB1080
CsaV3_6G016710Wild cucumber (PI 183967)cpicucB055
CsaV3_6G016710Wild cucumber (PI 183967)cpicucB243
CsaV3_6G016710Wild cucumber (PI 183967)cpicucB364
CsaV3_6G016710Bottle gourd (USVL1VR-Ls)cuclsiB438
CsaV3_6G016710Bottle gourd (USVL1VR-Ls)cuclsiB464
CsaV3_6G016710Bottle gourd (USVL1VR-Ls)cuclsiB467
CsaV3_6G016710Bottle gourd (USVL1VR-Ls)cuclsiB479
CsaV3_6G016710Melon (DHL92) v3.5.1cucmeB445
CsaV3_6G016710Melon (DHL92) v3.5.1cucmeB462
CsaV3_6G016710Melon (DHL92) v3.5.1cucmeB500
CsaV3_6G016710Melon (DHL92) v3.5.1cucmeB524
CsaV3_6G016710Melon (DHL92) v3.6.1cucmedB436
CsaV3_6G016710Melon (DHL92) v3.6.1cucmedB452
CsaV3_6G016710Melon (DHL92) v3.6.1cucmedB487
CsaV3_6G016710Melon (DHL92) v3.6.1cucmedB512
CsaV3_6G016710Watermelon (Charleston Gray)cucwcgB451
CsaV3_6G016710Watermelon (Charleston Gray)cucwcgB457
CsaV3_6G016710Watermelon (Charleston Gray)cucwcgB481
CsaV3_6G016710Watermelon (Charleston Gray)cucwcgB487
CsaV3_6G016710Watermelon (97103) v1cucwmB480
CsaV3_6G016710Watermelon (97103) v1cucwmB504
CsaV3_6G016710Watermelon (97103) v1cucwmB532
CsaV3_6G016710Watermelon (97103) v1cucwmB536
CsaV3_6G016710Watermelon (97103) v2cucwmbB440
CsaV3_6G016710Watermelon (97103) v2cucwmbB445
CsaV3_6G016710Watermelon (97103) v2cucwmbB468
CsaV3_6G016710Watermelon (97103) v2cucwmbB475
CsaV3_6G016710Watermelon (97103) v2cucwmbB503
CsaV3_6G016710Wax gourdcucwgoB548
CsaV3_6G016710Wax gourdcucwgoB626
CsaV3_6G016710Wax gourdcucwgoB655