CsaV3_6G015300 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_6G015300
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionMultiprotein bridging factor 1
Locationchr6 : 11140310 .. 11142184 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AATGAAATGAAGAAAATTTGTTGGATTGGGTAGTCCGAAAACCCGATTATTTGGACCCGAGAAACCGAGGTTTTTGTTTATTGTTCCCCACGGCAATAAGTAATGGCGTGAATTGACTGCGTGCGCTTCAAGCTATCAGGACATTTTTATATCCTCCGATTAGAAACCCTAATTCAGACTCTCCGTATTACCCACCCAGGAACCCCTTTGTAACGAGAAACGGTAACACGAAGAAAGTTGAAATGGCTGGAATCGGACCACTTTCACAGGACTGGGAACCGGTTGTCATCAGGAAGAAGGCACCTAACGCCGCCGCAAAGAAGGATGAGAAGGCTGTTAATGCTGCACGCCGAGCCGGGGCGGAGATTGAAACCATAAAGAAATGTGAGCTCTCTAACTTTTATCTGTTATCCCTTTTTTTTTCCTCTACAAGAAGCCCCAATCGCTGTTTTCTTGTTTTTGATTTGACTTCCGACTCTATTTATTCGTAAATTGATAACTGTTTAGCACGGTGGTGATGATAATCGAGGGTTTTAAGTTAAAAAGATACATCTATGTTTAATATAGAGGAGCCATGTAGATTGATTTATTTTTTTCAACTGTCCATCGGATTCTTTTACTGGATCGAGTGGGCAATGATTATTTGGGGCTTCTTGTTGGTCCTAACTGAGTTGGGCTATGGGTACCTGTTATTTCTTTATATTCTGCGTATGTTTGTTCACAAATGGCCATAAGTCTGTTTTATCCAGTGAAATTTAGTGTTGCAATGATACTTTTTTTTTGCCTTTTGCAGCTGCTGCTGGGTCGAACAAATCTGCCTCCAGCAGCACTACTTTGAATACTAGGAAGCTTGACGAAGAGACGGAGAACCTTTCTCGTGAGTATTTCTCGATTACATTTGCATAGCATGGTTGGATAAGGTTTTTTTTTTATCCCTTGTTTCATTTATCGGAGGATTCGCTGCTTTCATATCAGAGGAGCATGGAAGCAGTCAATGACACGAAATCTTTACCGTCTCAATTACTTATGGGAATTGTACTGCTTTATATTTATCTTTTTTGTGGTATTTTCTTCATTCATTACTTTTTTGTCAATTGGATGTTTTATTTAAATTCTAGATGATCGTGTTCCAACTGAGCTGAAGAAAGCAATTATGCATGCTCGAACAGAGAAGAAGCTTACACAGTCTCAACTTGCTCAAGTATGTTTGTTGTACACTCTCTGTTGGCTGGGTCTCTATTATGTGCACGTGTTAATGATGATCTTGAATTATTTTTTTCTTCCCCTGTAGCTTATTAATGAGAAGCCTCAAGTTATCCAGGAGTACGAATCTGGAAAAGCTATTCCAAATCAACAAATAATAACCAAACTTGAGAGAGCTCTTGGAGCGAAATTGCGTGGGAAGAAATAAAGAGATATGGAAAGTTAAGTATGAGTTCTACGTAAGCTTTTGTTTGAACCATGCTAAAAAATTCATACCCTACCGTGGTTTCAATGTGTAATTATGTTCGACCATCCTCGTATTCCTGTATAACCACTGTTGCAGTGTCTTGGTGAGTTCTTACCTGGAAATAAATAAATATTGTGTCTGTCATGTTGCGTTAGTTTCCAGATGTTTTGGCTACACTTATTACATCAGAACTTGGCTTTATTTGAATTTAATGGCTGCAGCCATGACAATTAACAATTCAGCAACTTGTATGGAGAGCGTAGGGTTGTCGTTTCATAGTTGTTTCTGAACATTATTTCTATTATCGATGGCCATGATGCAATTTGAATTCTTTGCAAAATTTCCCCTTTGAATTGGTTCGACTGAGAATACAGGTTCTTCACTTAGGCCAATGTCTTTTGGATTGGAGTGACATAAATGTACGG

mRNA sequence

ATGGCTGGAATCGGACCACTTTCACAGGACTGGGAACCGGTTGTCATCAGGAAGAAGGCACCTAACGCCGCCGCAAAGAAGGATGAGAAGGCTGTTAATGCTGCACGCCGAGCCGGGGCGGAGATTGAAACCATAAAGAAATCTGCTGCTGGGTCGAACAAATCTGCCTCCAGCAGCACTACTTTGAATACTAGGAAGCTTGACGAAGAGACGGAGAACCTTTCTCATGATCGTGTTCCAACTGAGCTGAAGAAAGCAATTATGCATGCTCGAACAGAGAAGAAGCTTACACAGTCTCAACTTGCTCAACTTATTAATGAGAAGCCTCAAGTTATCCAGGAGTACGAATCTGGAAAAGCTATTCCAAATCAACAAATAATAACCAAACTTGAGAGAGCTCTTGGAGCGAAATTGCGTGGGAAGAAATAA

Coding sequence (CDS)

ATGGCTGGAATCGGACCACTTTCACAGGACTGGGAACCGGTTGTCATCAGGAAGAAGGCACCTAACGCCGCCGCAAAGAAGGATGAGAAGGCTGTTAATGCTGCACGCCGAGCCGGGGCGGAGATTGAAACCATAAAGAAATCTGCTGCTGGGTCGAACAAATCTGCCTCCAGCAGCACTACTTTGAATACTAGGAAGCTTGACGAAGAGACGGAGAACCTTTCTCATGATCGTGTTCCAACTGAGCTGAAGAAAGCAATTATGCATGCTCGAACAGAGAAGAAGCTTACACAGTCTCAACTTGCTCAACTTATTAATGAGAAGCCTCAAGTTATCCAGGAGTACGAATCTGGAAAAGCTATTCCAAATCAACAAATAATAACCAAACTTGAGAGAGCTCTTGGAGCGAAATTGCGTGGGAAGAAATAA

Protein sequence

MAGIGPLSQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETIKKSAAGSNKSASSSTTLNTRKLDEETENLSHDRVPTELKKAIMHARTEKKLTQSQLAQLINEKPQVIQEYESGKAIPNQQIITKLERALGAKLRGKK
Homology
[Close]
BLAST of CsaV3_6G015300 vs. NCBI nr
Match: XP_004149278.1 (PREDICTED: multiprotein-bridging factor 1b [Cucumis sativus] >KGN46986.1 hypothetical protein Csa_6G157120 [Cucumis sativus])

HSP 1 Score: 248.4 bits (633), Expect = 1.4e-62
Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 0 

Query: 1   MAGIGPLSQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETIKKSAAGXXXXXXXXT 60
           MAGIGPLSQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETIKKSAAGXXXXXXXXT
Sbjct: 1   MAGIGPLSQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETIKKSAAGXXXXXXXXT 60

Query: 61  TLNTRKLDEETENLSHDRVPTELKKAIMHARTEKKLTQSQLAQLINEKPQVIQEYESGKA 120
           TLNTRKLDEETENLSHDRVPTELKKAIMHARTEKKLTQSQLAQLINEKPQVIQEYESGKA
Sbjct: 61  TLNTRKLDEETENLSHDRVPTELKKAIMHARTEKKLTQSQLAQLINEKPQVIQEYESGKA 120

Query: 121 IPNQQIITKLERALGAKLRGKK 143
           IPNQQIITKLERALGAKLRGKK
Sbjct: 121 IPNQQIITKLERALGAKLRGKK 142

[Close]
BLAST of CsaV3_6G015300 vs. NCBI nr
Match: XP_008448251.1 (PREDICTED: multiprotein-bridging factor 1b [Cucumis melo])

HSP 1 Score: 246.9 bits (629), Expect = 4.2e-62
Identity = 133/142 (93.66%), Postives = 134/142 (94.37%), Query Frame = 0 

Query: 1   MAGIGPLSQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETIKKSAAGXXXXXXXXT 60
           MAGIGPLSQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETIKKSAAG        T
Sbjct: 1   MAGIGPLSQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETIKKSAAGSNKSASSST 60

Query: 61  TLNTRKLDEETENLSHDRVPTELKKAIMHARTEKKLTQSQLAQLINEKPQVIQEYESGKA 120
           +LNTRKLDEETENLSHDRVPTELKKAIMHARTEKKLTQSQLAQLINEKPQVIQEYESGKA
Sbjct: 61  SLNTRKLDEETENLSHDRVPTELKKAIMHARTEKKLTQSQLAQLINEKPQVIQEYESGKA 120

Query: 121 IPNQQIITKLERALGAKLRGKK 143
           IPNQQIITKLERALGAKLRGKK
Sbjct: 121 IPNQQIITKLERALGAKLRGKK 142

[Close]
BLAST of CsaV3_6G015300 vs. NCBI nr
Match: XP_022149711.1 (multiprotein-bridging factor 1b-like [Momordica charantia])

HSP 1 Score: 240.7 bits (613), Expect = 3.0e-60
Identity = 129/142 (90.85%), Postives = 133/142 (93.66%), Query Frame = 0 

Query: 1   MAGIGPLSQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETIKKSAAGXXXXXXXXT 60
           MAGIGPLSQDWEPVV+RKKAPNAAAKKDEKAVNAARRAGAEIETIKKSAAG        T
Sbjct: 1   MAGIGPLSQDWEPVVLRKKAPNAAAKKDEKAVNAARRAGAEIETIKKSAAGSNKSASSST 60

Query: 61  TLNTRKLDEETENLSHDRVPTELKKAIMHARTEKKLTQSQLAQLINEKPQVIQEYESGKA 120
           +LNTRKLDEETENLSHDRVPTELKKAIM ARTEKKLTQSQLAQLINEKPQVIQ+YE+GKA
Sbjct: 61  SLNTRKLDEETENLSHDRVPTELKKAIMQARTEKKLTQSQLAQLINEKPQVIQDYEAGKA 120

Query: 121 IPNQQIITKLERALGAKLRGKK 143
           IPNQQIITKLERALGAKLRGKK
Sbjct: 121 IPNQQIITKLERALGAKLRGKK 142

[Close]
BLAST of CsaV3_6G015300 vs. NCBI nr
Match: XP_022943574.1 (multiprotein-bridging factor 1b [Cucurbita moschata] >XP_022986044.1 multiprotein-bridging factor 1b [Cucurbita maxima] >XP_023513396.1 multiprotein-bridging factor 1b [Cucurbita pepo subsp. pepo])

HSP 1 Score: 239.6 bits (610), Expect = 6.6e-60
Identity = 128/142 (90.14%), Postives = 132/142 (92.96%), Query Frame = 0 

Query: 1   MAGIGPLSQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETIKKSAAGXXXXXXXXT 60
           MAGIGPL+QDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIET+KKS AG        T
Sbjct: 1   MAGIGPLTQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETVKKSTAGSNKSASSST 60

Query: 61  TLNTRKLDEETENLSHDRVPTELKKAIMHARTEKKLTQSQLAQLINEKPQVIQEYESGKA 120
           +LNTRKLDEETENL+HDRVPTELKKAIM ARTEKKLTQSQLAQLINEKPQVIQEYESGKA
Sbjct: 61  SLNTRKLDEETENLTHDRVPTELKKAIMQARTEKKLTQSQLAQLINEKPQVIQEYESGKA 120

Query: 121 IPNQQIITKLERALGAKLRGKK 143
           IPNQQIITKLERALGAKLRGKK
Sbjct: 121 IPNQQIITKLERALGAKLRGKK 142

[Close]
BLAST of CsaV3_6G015300 vs. NCBI nr
Match: XP_023533868.1 (multiprotein-bridging factor 1b-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 238.4 bits (607), Expect = 1.5e-59
Identity = 129/142 (90.85%), Postives = 132/142 (92.96%), Query Frame = 0 

Query: 1   MAGIGPLSQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETIKKSAAGXXXXXXXXT 60
           MAGI PLSQDWEPVV+RKKAPNAAAKKDEKAVNAARRAGAEIETIKKSAAG        T
Sbjct: 1   MAGIVPLSQDWEPVVLRKKAPNAAAKKDEKAVNAARRAGAEIETIKKSAAGSNKSASSST 60

Query: 61  TLNTRKLDEETENLSHDRVPTELKKAIMHARTEKKLTQSQLAQLINEKPQVIQEYESGKA 120
           +LNTRKLDEETENL+HDRVPTELKKAIM ARTEKKLTQSQLAQLINEKPQVIQEYESGKA
Sbjct: 61  SLNTRKLDEETENLTHDRVPTELKKAIMQARTEKKLTQSQLAQLINEKPQVIQEYESGKA 120

Query: 121 IPNQQIITKLERALGAKLRGKK 143
           IPNQQIITKLERALGAKLRGKK
Sbjct: 121 IPNQQIITKLERALGAKLRGKK 142

[Close]
BLAST of CsaV3_6G015300 vs. TAIR10
Match: AT3G58680.1 (multiprotein bridging factor 1B)

HSP 1 Score: 219.2 bits (557), Expect = 1.7e-57
Identity = 114/142 (80.28%), Postives = 128/142 (90.14%), Query Frame = 0 

Query: 1   MAGIGPLSQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETIKKSAAGXXXXXXXXT 60
           MAGIGP++QDWEPVVIRK+APNAAAK+DEK VNAARR+GA+IET++K  AG        T
Sbjct: 1   MAGIGPITQDWEPVVIRKRAPNAAAKRDEKTVNAARRSGADIETVRKFNAGSNKAASSGT 60

Query: 61  TLNTRKLDEETENLSHDRVPTELKKAIMHARTEKKLTQSQLAQLINEKPQVIQEYESGKA 120
           +LNT+KLD++TENLSHDRVPTELKKAIM AR EKKLTQSQLA LINEKPQVIQEYESGKA
Sbjct: 61  SLNTKKLDDDTENLSHDRVPTELKKAIMQARGEKKLTQSQLAHLINEKPQVIQEYESGKA 120

Query: 121 IPNQQIITKLERALGAKLRGKK 143
           IPNQQI++KLERALGAKLRGKK
Sbjct: 121 IPNQQILSKLERALGAKLRGKK 142

[Close]
BLAST of CsaV3_6G015300 vs. TAIR10
Match: AT2G42680.1 (multiprotein bridging factor 1A)

HSP 1 Score: 213.0 bits (541), Expect = 1.2e-55
Identity = 110/142 (77.46%), Postives = 127/142 (89.44%), Query Frame = 0 

Query: 1   MAGIGPLSQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETIKKSAAGXXXXXXXXT 60
           MAGIGP++QDWEPVVIRKK  NAAAK+DEK VNAARR+GA+IET++K  AG        T
Sbjct: 1   MAGIGPITQDWEPVVIRKKPANAAAKRDEKTVNAARRSGADIETVRKFNAGTNKAASSGT 60

Query: 61  TLNTRKLDEETENLSHDRVPTELKKAIMHARTEKKLTQSQLAQLINEKPQVIQEYESGKA 120
           +LNT+ LD++TENL+H+RVPTELKKAIM ART+KKLTQSQLAQ+INEKPQVIQEYESGKA
Sbjct: 61  SLNTKMLDDDTENLTHERVPTELKKAIMQARTDKKLTQSQLAQIINEKPQVIQEYESGKA 120

Query: 121 IPNQQIITKLERALGAKLRGKK 143
           IPNQQI++KLERALGAKLRGKK
Sbjct: 121 IPNQQILSKLERALGAKLRGKK 142

[Close]
BLAST of CsaV3_6G015300 vs. TAIR10
Match: AT3G24500.1 (multiprotein bridging factor 1C)

HSP 1 Score: 127.1 bits (318), Expect = 8.7e-30
Identity = 68/139 (48.92%), Postives = 94/139 (67.63%), Query Frame = 0 

Query: 5   GPLSQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETIKKSAAGXXXXXXXXT--TL 64
           G ++QDWEPVV+ K    +   +D KAVNAA R G  ++T+KK  AG            +
Sbjct: 7   GAVTQDWEPVVLHKSKQKSQDLRDPKAVNAALRNGVAVQTVKKFDAGSNKKGKSTAVPVI 66

Query: 65  NTRKLDEETENLSHDRVPTELKKAIMHARTEKKLTQSQLAQLINEKPQVIQEYESGKAIP 124
           NT+KL+EETE  + DRV  E++  I  AR EKK++Q+ LA+ INE+ QV+QEYE+GKA+P
Sbjct: 67  NTKKLEEETEPAAMDRVKAEVRLMIQKARLEKKMSQADLAKQINERTQVVQEYENGKAVP 126

Query: 125 NQQIITKLERALGAKLRGK 142
           NQ ++ K+E+ LG KLRGK
Sbjct: 127 NQAVLAKMEKVLGVKLRGK 145

[Close]
BLAST of CsaV3_6G015300 vs. Swiss-Prot
Match: sp|Q9LXT3|MBF1B_ARATH (Multiprotein-bridging factor 1b OS=Arabidopsis thaliana OX=3702 GN=MBF1B PE=2 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 3.0e-56
Identity = 114/142 (80.28%), Postives = 128/142 (90.14%), Query Frame = 0 

Query: 1   MAGIGPLSQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETIKKSAAGXXXXXXXXT 60
           MAGIGP++QDWEPVVIRK+APNAAAK+DEK VNAARR+GA+IET++K  AG        T
Sbjct: 1   MAGIGPITQDWEPVVIRKRAPNAAAKRDEKTVNAARRSGADIETVRKFNAGSNKAASSGT 60

Query: 61  TLNTRKLDEETENLSHDRVPTELKKAIMHARTEKKLTQSQLAQLINEKPQVIQEYESGKA 120
           +LNT+KLD++TENLSHDRVPTELKKAIM AR EKKLTQSQLA LINEKPQVIQEYESGKA
Sbjct: 61  SLNTKKLDDDTENLSHDRVPTELKKAIMQARGEKKLTQSQLAHLINEKPQVIQEYESGKA 120

Query: 121 IPNQQIITKLERALGAKLRGKK 143
           IPNQQI++KLERALGAKLRGKK
Sbjct: 121 IPNQQILSKLERALGAKLRGKK 142

[Close]
BLAST of CsaV3_6G015300 vs. Swiss-Prot
Match: sp|Q9SJI8|MBF1A_ARATH (Multiprotein-bridging factor 1a OS=Arabidopsis thaliana OX=3702 GN=MBF1A PE=2 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 2.2e-54
Identity = 110/142 (77.46%), Postives = 127/142 (89.44%), Query Frame = 0 

Query: 1   MAGIGPLSQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETIKKSAAGXXXXXXXXT 60
           MAGIGP++QDWEPVVIRKK  NAAAK+DEK VNAARR+GA+IET++K  AG        T
Sbjct: 1   MAGIGPITQDWEPVVIRKKPANAAAKRDEKTVNAARRSGADIETVRKFNAGTNKAASSGT 60

Query: 61  TLNTRKLDEETENLSHDRVPTELKKAIMHARTEKKLTQSQLAQLINEKPQVIQEYESGKA 120
           +LNT+ LD++TENL+H+RVPTELKKAIM ART+KKLTQSQLAQ+INEKPQVIQEYESGKA
Sbjct: 61  SLNTKMLDDDTENLTHERVPTELKKAIMQARTDKKLTQSQLAQIINEKPQVIQEYESGKA 120

Query: 121 IPNQQIITKLERALGAKLRGKK 143
           IPNQQI++KLERALGAKLRGKK
Sbjct: 121 IPNQQILSKLERALGAKLRGKK 142

[Close]
BLAST of CsaV3_6G015300 vs. Swiss-Prot
Match: sp|Q5ZMC0|EDF1_CHICK (Endothelial differentiation-related factor 1 homolog OS=Gallus gallus OX=9031 GN=EDF1 PE=2 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 4.1e-29
Identity = 75/133 (56.39%), Postives = 91/133 (68.42%), Query Frame = 0 

Query: 10  DWEPV-VIRKKAPNAAAKKDEKAVNAARRAGAEIETIKKSAAGXXXXXXXXTTLNTRKLD 69
           DW+ V V+RKK P+AA  K ++AV AA+R G ++ET KK AAG         T NT KLD
Sbjct: 5   DWDTVTVLRKKGPSAAQAKSKQAVLAAQRRGEDVETSKKWAAG--QNKQHFITKNTAKLD 64

Query: 70  EETENLSHDRVPTELKKAIMHARTEKKLTQSQLAQLINEKPQVIQEYESGKAIPNQQIIT 129
            ETE L HDRVP E+ K I   R  K +TQ  LA  INEKPQVI +YESG+AIPN Q++ 
Sbjct: 65  RETEELHHDRVPLEVGKVIQQGRQSKGMTQKDLATKINEKPQVIADYESGRAIPNNQVMG 124

Query: 130 KLERALGAKLRGK 142
           K+ERA+G KLRGK
Sbjct: 125 KIERAIGLKLRGK 135

[Close]
BLAST of CsaV3_6G015300 vs. Swiss-Prot
Match: sp|Q9LV58|MBF1C_ARATH (Multiprotein-bridging factor 1c OS=Arabidopsis thaliana OX=3702 GN=MBF1C PE=1 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 1.6e-28
Identity = 68/139 (48.92%), Postives = 94/139 (67.63%), Query Frame = 0 

Query: 5   GPLSQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETIKKSAAGXXXXXXXXT--TL 64
           G ++QDWEPVV+ K    +   +D KAVNAA R G  ++T+KK  AG            +
Sbjct: 7   GAVTQDWEPVVLHKSKQKSQDLRDPKAVNAALRNGVAVQTVKKFDAGSNKKGKSTAVPVI 66

Query: 65  NTRKLDEETENLSHDRVPTELKKAIMHARTEKKLTQSQLAQLINEKPQVIQEYESGKAIP 124
           NT+KL+EETE  + DRV  E++  I  AR EKK++Q+ LA+ INE+ QV+QEYE+GKA+P
Sbjct: 67  NTKKLEEETEPAAMDRVKAEVRLMIQKARLEKKMSQADLAKQINERTQVVQEYENGKAVP 126

Query: 125 NQQIITKLERALGAKLRGK 142
           NQ ++ K+E+ LG KLRGK
Sbjct: 127 NQAVLAKMEKVLGVKLRGK 145

[Close]
BLAST of CsaV3_6G015300 vs. Swiss-Prot
Match: sp|Q3T0V7|EDF1_BOVIN (Endothelial differentiation-related factor 1 OS=Bos taurus OX=9913 GN=EDF1 PE=2 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 2.7e-28
Identity = 74/133 (55.64%), Postives = 89/133 (66.92%), Query Frame = 0 

Query: 10  DWEPV-VIRKKAPNAAAKKDEKAVNAARRAGAEIETIKKSAAGXXXXXXXXTTLNTRKLD 69
           DW+ V V+RKK P AA  K ++A+ AA+R G ++ET KK AAG         T NT KLD
Sbjct: 5   DWDTVTVLRKKGPTAAQAKSKQAILAAQRRGEDVETSKKWAAG--QNKQHSITKNTAKLD 64

Query: 70  EETENLSHDRVPTELKKAIMHARTEKKLTQSQLAQLINEKPQVIQEYESGKAIPNQQIIT 129
            ETE L HDRV  E+ K I   R  K LTQ  LA  INEKPQVI +YESG+AIPN Q++ 
Sbjct: 65  RETEELHHDRVTLEVGKVIQQGRQSKGLTQKDLATKINEKPQVIADYESGRAIPNNQVLG 124

Query: 130 KLERALGAKLRGK 142
           K+ERA+G KLRGK
Sbjct: 125 KIERAIGLKLRGK 135

[Close]
BLAST of CsaV3_6G015300 vs. TrEMBL
Match: tr|A0A0A0KGV6|A0A0A0KGV6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G157120 PE=4 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 9.4e-63
Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 0 

Query: 1   MAGIGPLSQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETIKKSAAGXXXXXXXXT 60
           MAGIGPLSQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETIKKSAAGXXXXXXXXT
Sbjct: 1   MAGIGPLSQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETIKKSAAGXXXXXXXXT 60

Query: 61  TLNTRKLDEETENLSHDRVPTELKKAIMHARTEKKLTQSQLAQLINEKPQVIQEYESGKA 120
           TLNTRKLDEETENLSHDRVPTELKKAIMHARTEKKLTQSQLAQLINEKPQVIQEYESGKA
Sbjct: 61  TLNTRKLDEETENLSHDRVPTELKKAIMHARTEKKLTQSQLAQLINEKPQVIQEYESGKA 120

Query: 121 IPNQQIITKLERALGAKLRGKK 143
           IPNQQIITKLERALGAKLRGKK
Sbjct: 121 IPNQQIITKLERALGAKLRGKK 142

[Close]
BLAST of CsaV3_6G015300 vs. TrEMBL
Match: tr|A0A1S3BIN6|A0A1S3BIN6_CUCME (multiprotein-bridging factor 1b OS=Cucumis melo OX=3656 GN=LOC103490498 PE=4 SV=1)

HSP 1 Score: 246.9 bits (629), Expect = 2.7e-62
Identity = 133/142 (93.66%), Postives = 134/142 (94.37%), Query Frame = 0 

Query: 1   MAGIGPLSQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETIKKSAAGXXXXXXXXT 60
           MAGIGPLSQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETIKKSAAG        T
Sbjct: 1   MAGIGPLSQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETIKKSAAGSNKSASSST 60

Query: 61  TLNTRKLDEETENLSHDRVPTELKKAIMHARTEKKLTQSQLAQLINEKPQVIQEYESGKA 120
           +LNTRKLDEETENLSHDRVPTELKKAIMHARTEKKLTQSQLAQLINEKPQVIQEYESGKA
Sbjct: 61  SLNTRKLDEETENLSHDRVPTELKKAIMHARTEKKLTQSQLAQLINEKPQVIQEYESGKA 120

Query: 121 IPNQQIITKLERALGAKLRGKK 143
           IPNQQIITKLERALGAKLRGKK
Sbjct: 121 IPNQQIITKLERALGAKLRGKK 142

[Close]
BLAST of CsaV3_6G015300 vs. TrEMBL
Match: tr|A0A2I4GFN0|A0A2I4GFN0_9ROSI (multiprotein-bridging factor 1b OS=Juglans regia OX=51240 GN=LOC109007487 PE=4 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 6.3e-59
Identity = 126/142 (88.73%), Postives = 130/142 (91.55%), Query Frame = 0 

Query: 1   MAGIGPLSQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETIKKSAAGXXXXXXXXT 60
           MAGIGP+SQDWEPVVIRKKAPNAAAKKDEKAVNAARR GAEIETIKKS AG        T
Sbjct: 1   MAGIGPISQDWEPVVIRKKAPNAAAKKDEKAVNAARRTGAEIETIKKSTAGTNKAASSST 60

Query: 61  TLNTRKLDEETENLSHDRVPTELKKAIMHARTEKKLTQSQLAQLINEKPQVIQEYESGKA 120
           +LNTRKLDEETENL+HDRVPTELKKAIM AR EKKLTQSQLAQ+INEKPQVIQEYESGKA
Sbjct: 61  SLNTRKLDEETENLAHDRVPTELKKAIMQARMEKKLTQSQLAQMINEKPQVIQEYESGKA 120

Query: 121 IPNQQIITKLERALGAKLRGKK 143
           IPNQQIITKLERALGAKLRGKK
Sbjct: 121 IPNQQIITKLERALGAKLRGKK 142

[Close]
BLAST of CsaV3_6G015300 vs. TrEMBL
Match: tr|A0A2I4DY07|A0A2I4DY07_9ROSI (multiprotein-bridging factor 1b-like OS=Juglans regia OX=51240 GN=LOC108984493 PE=4 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 2.4e-58
Identity = 124/142 (87.32%), Postives = 130/142 (91.55%), Query Frame = 0 

Query: 1   MAGIGPLSQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETIKKSAAGXXXXXXXXT 60
           MAGIGP+SQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIET+KKS AG        T
Sbjct: 1   MAGIGPISQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETVKKSTAGTNKAASSST 60

Query: 61  TLNTRKLDEETENLSHDRVPTELKKAIMHARTEKKLTQSQLAQLINEKPQVIQEYESGKA 120
           +LNTRKLDEETENL+H+RVPTELKKAIM AR EKKLTQSQLAQ+INEKPQVIQEYESGKA
Sbjct: 61  SLNTRKLDEETENLAHERVPTELKKAIMQARMEKKLTQSQLAQMINEKPQVIQEYESGKA 120

Query: 121 IPNQQIITKLERALGAKLRGKK 143
           IPNQQIITKLER LGAKLRGKK
Sbjct: 121 IPNQQIITKLERTLGAKLRGKK 142

[Close]
BLAST of CsaV3_6G015300 vs. TrEMBL
Match: tr|A0A2N9IIF6|A0A2N9IIF6_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS10797 PE=4 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 1.6e-57
Identity = 120/142 (84.51%), Postives = 131/142 (92.25%), Query Frame = 0 

Query: 1   MAGIGPLSQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETIKKSAAGXXXXXXXXT 60
           M+G+GP+SQDWEPVVIRKKAPNAAAKKDEKAVNAARR+GAEIET+KK+ AG        T
Sbjct: 1   MSGVGPISQDWEPVVIRKKAPNAAAKKDEKAVNAARRSGAEIETLKKATAGTNKAASSST 60

Query: 61  TLNTRKLDEETENLSHDRVPTELKKAIMHARTEKKLTQSQLAQLINEKPQVIQEYESGKA 120
           TLNTRKLDEETENL+H+RVPTELKKAIM AR EKKLTQ+QLAQ+INEKPQ+IQEYESGKA
Sbjct: 61  TLNTRKLDEETENLAHERVPTELKKAIMQARMEKKLTQAQLAQIINEKPQIIQEYESGKA 120

Query: 121 IPNQQIITKLERALGAKLRGKK 143
           IPNQQIITKLERALGAKLRGKK
Sbjct: 121 IPNQQIITKLERALGAKLRGKK 142

The following BLAST results are available for this feature:
BLAST of CsaV3_6G015300 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004149278.11.4e-62100.00PREDICTED: multiprotein-bridging factor 1b [Cucumis sativus] >KGN46986.1 hypothe... [more]
XP_008448251.14.2e-6293.66PREDICTED: multiprotein-bridging factor 1b [Cucumis melo][more]
XP_022149711.13.0e-6090.85multiprotein-bridging factor 1b-like [Momordica charantia][more]
XP_022943574.16.6e-6090.14multiprotein-bridging factor 1b [Cucurbita moschata] >XP_022986044.1 multiprotei... [more]
XP_023533868.11.5e-5990.85multiprotein-bridging factor 1b-like [Cucurbita pepo subsp. pepo][more]
BLAST of CsaV3_6G015300 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G58680.11.7e-5780.28multiprotein bridging factor 1B[more]
AT2G42680.11.2e-5577.46multiprotein bridging factor 1A[more]
AT3G24500.18.7e-3048.92multiprotein bridging factor 1C[more]
BLAST of CsaV3_6G015300 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9LXT3|MBF1B_ARATH3.0e-5680.28Multiprotein-bridging factor 1b OS=Arabidopsis thaliana OX=3702 GN=MBF1B PE=2 SV... [more]
sp|Q9SJI8|MBF1A_ARATH2.2e-5477.46Multiprotein-bridging factor 1a OS=Arabidopsis thaliana OX=3702 GN=MBF1A PE=2 SV... [more]
sp|Q5ZMC0|EDF1_CHICK4.1e-2956.39Endothelial differentiation-related factor 1 homolog OS=Gallus gallus OX=9031 GN... [more]
sp|Q9LV58|MBF1C_ARATH1.6e-2848.92Multiprotein-bridging factor 1c OS=Arabidopsis thaliana OX=3702 GN=MBF1C PE=1 SV... [more]
sp|Q3T0V7|EDF1_BOVIN2.7e-2855.64Endothelial differentiation-related factor 1 OS=Bos taurus OX=9913 GN=EDF1 PE=2 ... [more]
BLAST of CsaV3_6G015300 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KGV6|A0A0A0KGV6_CUCSA9.4e-63100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G157120 PE=4 SV=1[more]
tr|A0A1S3BIN6|A0A1S3BIN6_CUCME2.7e-6293.66multiprotein-bridging factor 1b OS=Cucumis melo OX=3656 GN=LOC103490498 PE=4 SV=... [more]
tr|A0A2I4GFN0|A0A2I4GFN0_9ROSI6.3e-5988.73multiprotein-bridging factor 1b OS=Juglans regia OX=51240 GN=LOC109007487 PE=4 S... [more]
tr|A0A2I4DY07|A0A2I4DY07_9ROSI2.4e-5887.32multiprotein-bridging factor 1b-like OS=Juglans regia OX=51240 GN=LOC108984493 P... [more]
tr|A0A2N9IIF6|A0A2N9IIF6_FAGSY1.6e-5784.51Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS10797 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0043565sequence-specific DNA binding
Vocabulary: INTERPRO
TermDefinition
IPR010982Lambda_DNA-bd_dom_sf
IPR013729MBF1_N
IPR001387Cro/C1-type_HTH
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0045893 positive regulation of transcription, DNA-templated
biological_process GO:0009644 response to high light intensity
biological_process GO:0042542 response to hydrogen peroxide
biological_process GO:0006904 vesicle docking involved in exocytosis
cellular_component GO:0005575 cellular_component
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0005623 cell
molecular_function GO:0043565 sequence-specific DNA binding
molecular_function GO:0003713 transcription coactivator activity
molecular_function GO:0003677 DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_6G015300.1CsaV3_6G015300.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 87..107
NoneNo IPR availableGENE3DG3DSA:1.10.260.40coord: 71..142
e-value: 9.4E-30
score: 103.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 46..79
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 48..64
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 65..79
NoneNo IPR availablePANTHERPTHR10245:SF101SUBFAMILY NOT NAMEDcoord: 22..142
NoneNo IPR availablePANTHERPTHR10245ENDOTHELIAL DIFFERENTIATION-RELATED FACTOR 1 MULTIPROTEIN BRIDGING FACTOR 1coord: 22..142
IPR001387Cro/C1-type helix-turn-helix domainSMARTSM00530mbf_short4coord: 86..141
e-value: 7.9E-11
score: 52.0
IPR001387Cro/C1-type helix-turn-helix domainPFAMPF01381HTH_3coord: 87..137
e-value: 2.0E-12
score: 46.9
IPR001387Cro/C1-type helix-turn-helix domainPROSITEPS50943HTH_CROC1coord: 87..141
score: 12.358
IPR001387Cro/C1-type helix-turn-helix domainCDDcd00093HTH_XREcoord: 85..135
e-value: 2.31593E-9
score: 48.7034
IPR013729Multiprotein bridging factor 1, N-terminalPFAMPF08523MBF1coord: 9..79
e-value: 2.3E-24
score: 85.5
IPR010982Lambda repressor-like, DNA-binding domain superfamilySUPERFAMILYSSF47413lambda repressor-like DNA-binding domainscoord: 80..138

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_6G015300CSPI06G12840Wild cucumber (PI 183967)cpicucB364
CsaV3_6G015300Cucsa.384830Cucumber (Gy14) v1cgycucB586
CsaV3_6G015300CmaCh20G002110Cucurbita maxima (Rimu)cmacucB0668
CsaV3_6G015300CmaCh02G000870Cucurbita maxima (Rimu)cmacucB0754
CsaV3_6G015300CmaCh19G010180Cucurbita maxima (Rimu)cmacucB0630
CsaV3_6G015300CmoCh19G010540Cucurbita moschata (Rifu)cmocucB0616
CsaV3_6G015300CmoCh02G000870Cucurbita moschata (Rifu)cmocucB0743
CsaV3_6G015300CmoCh20G002310Cucurbita moschata (Rifu)cmocucB0652
CsaV3_6G015300Cp4.1LG16g07650Cucurbita pepo (Zucchini)cpecucB0362
CsaV3_6G015300Cp4.1LG05g15120Cucurbita pepo (Zucchini)cpecucB0923
CsaV3_6G015300Cp4.1LG15g08340Cucurbita pepo (Zucchini)cpecucB0314
CsaV3_6G015300CsGy6G012930Cucumber (Gy14) v2cgybcucB298
CsaV3_6G015300Carg13597Silver-seed gourdcarcucB0027
CsaV3_6G015300Carg15731Silver-seed gourdcarcucB0570
CsaV3_6G015300MELO3C013580Melon (DHL92) v3.5.1cucmeB459
CsaV3_6G015300Lsi10G015990Bottle gourd (USVL1VR-Ls)cuclsiB442
CsaV3_6G015300MELO3C013580.2Melon (DHL92) v3.6.1cucmedB448
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_6G015300Bottle gourd (USVL1VR-Ls)cuclsiB456
CsaV3_6G015300Melon (DHL92) v3.5.1cucmeB448
CsaV3_6G015300Melon (DHL92) v3.5.1cucmeB505
CsaV3_6G015300Melon (DHL92) v3.6.1cucmedB422
CsaV3_6G015300Melon (DHL92) v3.6.1cucmedB492
CsaV3_6G015300Watermelon (Charleston Gray)cucwcgB460
CsaV3_6G015300Watermelon (97103) v1cucwmB538
CsaV3_6G015300Watermelon (97103) v2cucwmbB447
CsaV3_6G015300Wax gourdcucwgoB628
CsaV3_6G015300Silver-seed gourdcarcucB0424
CsaV3_6G015300Cucurbita maxima (Rimu)cmacucB0163
CsaV3_6G015300Cucurbita moschata (Rifu)cmocucB0145