CsaV3_6G015170 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_6G015170
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr6 : 11019623 .. 11020444 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATGAAAGTTAGAGTAGAGGGTAAATTAATATTTTGAATTGAGAAAAGTTTAGAAGTAAAAATGATATTTATAAAAAAAGGAAATGAGAAGAGGGGGAGGAGGGAATTAAAAGGGTTCACGCGGAGGAAGGTGTGGATGTTGGTAAGCCACCCCGTTCGCCAGCTGGCTGTCGGAGAGAGGCGTCCCGGAGAAAAAATTCAGAACCCAAACCCTTCTTTACCTTTCTTCTTTCTTCTTCTTTCTTCCTTCTTTCTTCCTTCTTCCTTCTTCCATTTCCATTTCCATTTCCATTGCACGTGATTCTCAATCTCACTCCATCGCTTTCTATCAAATCAAAATCCTCATCTTCTTCAAGATTCATTCTCAATTCCCTCCGATCCCCCTTCCCCCATTATTCCCCTACTTTACTTCTCTCCTCATTCTTCCTCCCTTTTCATACTTCTTCAGGTCTGTAATTTCTCTTTAATTCCTCTCTTTTGCGCATTCTCTCAAACCGCTTTTTTCTTTTTCTCTGGGTTATCGCTGTTTTTGTACATGGGATGTCATATTTTGATCTTGATTATGATAATGATGATGATGATTTAGCTTTTATTGTATTTGTGGGTCTTCTTTTTTGTTTTTGTTTACTGGGGTCTCTGATTTCTGCTTTGTTTCCTTGTGTAAGCATGACTTTGTTAATGTCCTTTCTTTCGTTTTTTTTTCTTTTCTTTTTTCGCTTTTTGTTTGTTCTCATTATTAGTGCTTATGCCCAATCATTTTGACGTTCCTGTTTCTTGGGTATTATGCCATCCAGCTTTGAAGATATTGAGGAAACCTTAA

mRNA sequence

ATGATGAAAGTTAGAGTAGAGGCTGGCTGTCGGAGAGAGGCGTCCCGGAGAAAAAATTCAGAACCCAAACCCTTCTTTACCTTTCTTCTTTCTTCTTCTTTCTTCCTTCTTTCTTCCTTCTTCCTTCTTCCATTTCCATTTCCATTTCCATTGCACGTGATTCTCAATCTCACTCCATCGCTTTCTATCAAATCAAAATCCTCATCTTCTTCAAGATTCATTCTCAATTCCCTCCGATCCCCCTTCCCCCATTATTCCCCTACTTTACTTCTCTCCTCATTCTTCCTCCCTTTTCATACTTCTTCAGCTTTGAAGATATTGAGGAAACCTTAA

Coding sequence (CDS)

ATGATGAAAGTTAGAGTAGAGGCTGGCTGTCGGAGAGAGGCGTCCCGGAGAAAAAATTCAGAACCCAAACCCTTCTTTACCTTTCTTCTTTCTTCTTCTTTCTTCCTTCTTTCTTCCTTCTTCCTTCTTCCATTTCCATTTCCATTTCCATTGCACGTGATTCTCAATCTCACTCCATCGCTTTCTATCAAATCAAAATCCTCATCTTCTTCAAGATTCATTCTCAATTCCCTCCGATCCCCCTTCCCCCATTATTCCCCTACTTTACTTCTCTCCTCATTCTTCCTCCCTTTTCATACTTCTTCAGCTTTGAAGATATTGAGGAAACCTTAA

Protein sequence

MMKVRVEAGCRREASRRKNSEPKPFFTFLLSSSFFLLSSFFLLPFPFPFPLHVILNLTPSLSIKSKSSSSSRFILNSLRSPFPHYSPTLLLSSFFLPFHTSSALKILRKP
Homology
[Close]
BLAST of CsaV3_6G015170 vs. NCBI nr
Match: KGN46971.1 (hypothetical protein Csa_6G154520 [Cucumis sativus])

HSP 1 Score: 132.1 bits (331), Expect = 1.2e-27
Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 0 

Query: 1   MMKVRVEAGCRREASRRKNSEPKPFFTFLLSSXXXXXXXXXXXPXXXXXXXXXXXXXXXX 60
           MMKVRVEAGCRREASRRKNSEPKPFFTFLLSSXXXXXXXXXXXPXXXXXXXXXXXXXXXX
Sbjct: 1   MMKVRVEAGCRREASRRKNSEPKPFFTFLLSSXXXXXXXXXXXPXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXRFILNSLRSPFPHYSPTLLLSSFFLPFHTSSALKILRKP 111
           XXXXXXXXXXXRFILNSLRSPFPHYSPTLLLSSFFLPFHTSSALKILRKP
Sbjct: 61  XXXXXXXXXXXRFILNSLRSPFPHYSPTLLLSSFFLPFHTSSALKILRKP 110

[Close]
BLAST of CsaV3_6G015170 vs. TrEMBL
Match: tr|A0A0A0KGT6|A0A0A0KGT6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G154520 PE=4 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 7.7e-28
Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 0 

Query: 1   MMKVRVEAGCRREASRRKNSEPKPFFTFLLSSXXXXXXXXXXXPXXXXXXXXXXXXXXXX 60
           MMKVRVEAGCRREASRRKNSEPKPFFTFLLSSXXXXXXXXXXXPXXXXXXXXXXXXXXXX
Sbjct: 1   MMKVRVEAGCRREASRRKNSEPKPFFTFLLSSXXXXXXXXXXXPXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXRFILNSLRSPFPHYSPTLLLSSFFLPFHTSSALKILRKP 111
           XXXXXXXXXXXRFILNSLRSPFPHYSPTLLLSSFFLPFHTSSALKILRKP
Sbjct: 61  XXXXXXXXXXXRFILNSLRSPFPHYSPTLLLSSFFLPFHTSSALKILRKP 110

The following BLAST results are available for this feature:
BLAST of CsaV3_6G015170 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN46971.11.2e-27100.00hypothetical protein Csa_6G154520 [Cucumis sativus][more]
BLAST of CsaV3_6G015170 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsaV3_6G015170 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsaV3_6G015170 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KGT6|A0A0A0KGT6_CUCSA7.7e-28100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G154520 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_6G015170.1CsaV3_6G015170.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_6G015170Cucumber (Gy14) v2cgybcucB298
CsaV3_6G015170Cucumber (Gy14) v1cgycucB586
CsaV3_6G015170Wild cucumber (PI 183967)cpicucB364
CsaV3_6G015170Watermelon (Charleston Gray)cucwcgB460
CsaV3_6G015170Watermelon (97103) v1cucwmB538
CsaV3_6G015170Watermelon (97103) v2cucwmbB447
CsaV3_6G015170Wax gourdcucwgoB628