CsaV3_6G014750 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_6G014750
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr6 : 10709780 .. 10710073 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATCCCGAACAAAAGAGCACCTCCAAACGGTACGAACGAAACGCCACTTTCAACGTCGTTTTAAGCACAACCGCATATCTAAATCCATCCACATGACATACGTATATTAAATATATTTATTTATTTTACAATTTTCATAGTCCCGTCACCGCCGCTGTTCGTGTTACCAACCATCGCCGCCGCCGCCGCCATCGACGCTGCCGCCAAGACTTTTTCACCAATCATACGGCGGCTCAGATCAAAACGAAAAAAACGGAAAACAAACAGAAGGCGGTTTTGGGGAATATTCTAG

mRNA sequence

ATGATCCCGAACAAAAGAGCACCTCCAAACGTCCCGTCACCGCCGCTGTTCGTGTTACCAACCATCGCCGCCGCCGCCGCCATCGACGCTGCCGCCAAGACTTTTTCACCAATCATACGGCGGCTCAGATCAAAACGAAAAAAACGGAAAACAAACAGAAGGCGGTTTTGGGGAATATTCTAG

Coding sequence (CDS)

ATGATCCCGAACAAAAGAGCACCTCCAAACGTCCCGTCACCGCCGCTGTTCGTGTTACCAACCATCGCCGCCGCCGCCGCCATCGACGCTGCCGCCAAGACTTTTTCACCAATCATACGGCGGCTCAGATCAAAACGAAAAAAACGGAAAACAAACAGAAGGCGGTTTTGGGGAATATTCTAG

Protein sequence

MIPNKRAPPNVPSPPLFVLPTIAAAAAIDAAAKTFSPIIRRLRSKRKKRKTNRRRFWGIF
Homology
[Close]
BLAST of CsaV3_6G014750 vs. NCBI nr
Match: KGN46922.1 (hypothetical protein Csa_6G151100 [Cucumis sativus])

HSP 1 Score: 116.3 bits (290), Expect = 3.6e-23
Identity = 60/60 (100.00%), Postives = 60/60 (100.00%), Query Frame = 0 

Query: 1  MIPNKRAPPNVPSPPLFVLPTIAAAAAIDAAAKTFSPIIRRLRSKRKKRKTNRRRFWGIF 60
          MIPNKRAPPNVPSPPLFVLPTIAAAAAIDAAAKTFSPIIRRLRSKRKKRKTNRRRFWGIF
Sbjct: 1  MIPNKRAPPNVPSPPLFVLPTIAAAAAIDAAAKTFSPIIRRLRSKRKKRKTNRRRFWGIF 60

[Close]
BLAST of CsaV3_6G014750 vs. TrEMBL
Match: tr|A0A0A0KET6|A0A0A0KET6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G151100 PE=4 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 2.4e-23
Identity = 60/60 (100.00%), Postives = 60/60 (100.00%), Query Frame = 0 

Query: 1  MIPNKRAPPNVPSPPLFVLPTIAAAAAIDAAAKTFSPIIRRLRSKRKKRKTNRRRFWGIF 60
          MIPNKRAPPNVPSPPLFVLPTIAAAAAIDAAAKTFSPIIRRLRSKRKKRKTNRRRFWGIF
Sbjct: 1  MIPNKRAPPNVPSPPLFVLPTIAAAAAIDAAAKTFSPIIRRLRSKRKKRKTNRRRFWGIF 60

The following BLAST results are available for this feature:
BLAST of CsaV3_6G014750 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN46922.13.6e-23100.00hypothetical protein Csa_6G151100 [Cucumis sativus][more]
BLAST of CsaV3_6G014750 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsaV3_6G014750 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsaV3_6G014750 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KET6|A0A0A0KET6_CUCSA2.4e-23100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G151100 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_6G014750.1CsaV3_6G014750.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_6G014750Cucurbita moschata (Rifu)cmocucB0662
CsaV3_6G014750Cucurbita moschata (Rifu)cmocucB0741
CsaV3_6G014750Cucurbita moschata (Rifu)cmocucB1021
CsaV3_6G014750Cucurbita pepo (Zucchini)cpecucB0351
CsaV3_6G014750Cucurbita pepo (Zucchini)cpecucB0619
CsaV3_6G014750Cucurbita pepo (Zucchini)cpecucB0782
CsaV3_6G014750Cucurbita pepo (Zucchini)cpecucB0934
CsaV3_6G014750Wild cucumber (PI 183967)cpicucB364
CsaV3_6G014750Wild cucumber (PI 183967)cpicucB367
CsaV3_6G014750Bottle gourd (USVL1VR-Ls)cuclsiB439
CsaV3_6G014750Bottle gourd (USVL1VR-Ls)cuclsiB463
CsaV3_6G014750Bottle gourd (USVL1VR-Ls)cuclsiB476
CsaV3_6G014750Melon (DHL92) v3.5.1cucmeB429
CsaV3_6G014750Melon (DHL92) v3.5.1cucmeB496
CsaV3_6G014750Melon (DHL92) v3.5.1cucmeB523
CsaV3_6G014750Melon (DHL92) v3.6.1cucmedB419
CsaV3_6G014750Melon (DHL92) v3.6.1cucmedB484
CsaV3_6G014750Melon (DHL92) v3.6.1cucmedB511
CsaV3_6G014750Watermelon (Charleston Gray)cucwcgB447
CsaV3_6G014750Watermelon (Charleston Gray)cucwcgB486
CsaV3_6G014750Watermelon (Charleston Gray)cucwcgB458
CsaV3_6G014750Watermelon (97103) v1cucwmB478
CsaV3_6G014750Watermelon (97103) v1cucwmB531
CsaV3_6G014750Watermelon (97103) v1cucwmB535
CsaV3_6G014750Watermelon (97103) v2cucwmbB437
CsaV3_6G014750Watermelon (97103) v2cucwmbB444
CsaV3_6G014750Watermelon (97103) v2cucwmbB473
CsaV3_6G014750Wax gourdcucwgoB627
CsaV3_6G014750Wax gourdcucwgoB653
CsaV3_6G014750Cucumber (Chinese Long) v3cuccucB143
CsaV3_6G014750Cucumber (Chinese Long) v3cuccucB210
CsaV3_6G014750Silver-seed gourdcarcucB0281
CsaV3_6G014750Silver-seed gourdcarcucB0447
CsaV3_6G014750Silver-seed gourdcarcucB0966
CsaV3_6G014750Cucumber (Gy14) v2cgybcucB143
CsaV3_6G014750Cucumber (Gy14) v2cgybcucB298
CsaV3_6G014750Cucumber (Gy14) v2cgybcucB300
CsaV3_6G014750Cucumber (Gy14) v1cgycucB086
CsaV3_6G014750Cucumber (Gy14) v1cgycucB586
CsaV3_6G014750Cucurbita maxima (Rimu)cmacucB0310
CsaV3_6G014750Cucurbita maxima (Rimu)cmacucB0679
CsaV3_6G014750Cucurbita maxima (Rimu)cmacucB0753
CsaV3_6G014750Cucurbita maxima (Rimu)cmacucB1037
CsaV3_6G014750Cucurbita moschata (Rifu)cmocucB0305