CsaV3_6G012620 (gene) Cucumber (Chinese Long) v3

NameCsaV3_6G012620
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr6 : 8710434 .. 8710724 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAAGCTCGTTGTCCCAACGTACATATGCAGGTACACTTTCTAAATAAGTGCTTTTTTAATTAATTCGTTTTCTTATATTTATAGATCTTTTATGATATGATTTTGTAGGGCTTTATTGGTATCGAGCAGGCAAGGGATTCAAGAACAATGCCCTGCAATTCAACTTCGTATACAGGAAAAGGGTTTCTTCACATAGATCATTCCGACAAGGTAGATCAAGTTGAGCTTCAGAAGGATGTAACGAAAGCTTCTAAAAACCTAATGTCATATGGTGATTTTCTCCGATGA

mRNA sequence

ATGCAAGCTCGTTGTCCCAACGTACATATGCAGGGCTTTATTGGTATCGAGCAGGCAAGGGATTCAAGAACAATGCCCTGCAATTCAACTTCGTATACAGGAAAAGGGTTTCTTCACATAGATCATTCCGACAAGGTAGATCAAGTTGAGCTTCAGAAGGATGTAACGAAAGCTTCTAAAAACCTAATGTCATATGGTGATTTTCTCCGATGA

Coding sequence (CDS)

ATGCAAGCTCGTTGTCCCAACGTACATATGCAGGGCTTTATTGGTATCGAGCAGGCAAGGGATTCAAGAACAATGCCCTGCAATTCAACTTCGTATACAGGAAAAGGGTTTCTTCACATAGATCATTCCGACAAGGTAGATCAAGTTGAGCTTCAGAAGGATGTAACGAAAGCTTCTAAAAACCTAATGTCATATGGTGATTTTCTCCGATGA

Protein sequence

MQARCPNVHMQGFIGIEQARDSRTMPCNSTSYTGKGFLHIDHSDKVDQVELQKDVTKASKNLMSYGDFLR
BLAST of CsaV3_6G012620 vs. NCBI nr
Match: KGN46706.1 (hypothetical protein Csa_6G124210 [Cucumis sativus])

HSP 1 Score: 151.0 bits (380), Expect = 1.5e-33
Identity = 70/70 (100.00%), Postives = 70/70 (100.00%), Query Frame = 0

Query: 1  MQARCPNVHMQGFIGIEQARDSRTMPCNSTSYTGKGFLHIDHSDKVDQVELQKDVTKASK 60
          MQARCPNVHMQGFIGIEQARDSRTMPCNSTSYTGKGFLHIDHSDKVDQVELQKDVTKASK
Sbjct: 1  MQARCPNVHMQGFIGIEQARDSRTMPCNSTSYTGKGFLHIDHSDKVDQVELQKDVTKASK 60

Query: 61 NLMSYGDFLR 71
          NLMSYGDFLR
Sbjct: 61 NLMSYGDFLR 70

BLAST of CsaV3_6G012620 vs. TrEMBL
Match: tr|A0A0A0KG32|A0A0A0KG32_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G124210 PE=4 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 1.0e-33
Identity = 70/70 (100.00%), Postives = 70/70 (100.00%), Query Frame = 0

Query: 1  MQARCPNVHMQGFIGIEQARDSRTMPCNSTSYTGKGFLHIDHSDKVDQVELQKDVTKASK 60
          MQARCPNVHMQGFIGIEQARDSRTMPCNSTSYTGKGFLHIDHSDKVDQVELQKDVTKASK
Sbjct: 1  MQARCPNVHMQGFIGIEQARDSRTMPCNSTSYTGKGFLHIDHSDKVDQVELQKDVTKASK 60

Query: 61 NLMSYGDFLR 71
          NLMSYGDFLR
Sbjct: 61 NLMSYGDFLR 70

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KGN46706.11.5e-33100.00hypothetical protein Csa_6G124210 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A0A0KG32|A0A0A0KG32_CUCSA1.0e-33100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G124210 PE=4 SV=1[more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_6G012620.1CsaV3_6G012620.1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None