CsaV3_6G012450 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_6G012450
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionPentatricopeptide repeat-containing protein, putative
Locationchr6 : 8579979 .. 8582817 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTTATTTTATGTTTTGCCAACCTAATTAGTTTCTACTTCTCACAATTTCACTAGAATAAAGCATGGTCCACGTCCAATGCGGGGATGAACTAGGGTTTTTTCGTCGGAGCAGCTGAAATAAGCCAATCCAAGGCTTTCTTTTTTCATTATTTTTAATTCAACTATCCTATGCACAATCATTCCCGGGCTACTCTGAATTCTGATTATCTCCCTGACGGTGATAGCCCCTTTCCTCGTGCTAGTCTGTCGCCGTTTAGTGCACGGCTGATGTGTGTCAAAATAACGGCCACATCCCATCCAACAACGTTCGTCTTCGATTATGTTTGTGGTTGACTAGTTCTTTTTTTTTTTTTTTCCCTTTTTCGGGGCCTCACTACATCTTTAACTTGTTTTCTGCAGATTAAGCATATGAAAATAGAGCTAGTGATAGAGGCCGAAATTTAGTCTTCGGCGGTGTTCGCGTGGGGGCCTATCTGTTGAATGTTTGTACCTCTAAAAACTGCCGCTATTCATATTCTTATACCCAATTATATTAGGTACTGTTTTCAAGTTTGGCAGTGAGGATTGAACTTCAGCTTATAATGCCAGTTCTGCTTCAGAATTTGATGATTGATAAAGCTGTTACATTAATCTGAGCCTTCAATATCTACCAATTCCACTTACCTCAGTCAGGGTTCTGTGCATATTTATTTGCATTTTATTTTTGTTTTTCTTCTCCAGCTATTTGTTATAGTGATCAATAATGATTTAGTTTTGCTGATTTTGATTCAATCCATCTGTTTGAGACTTTATGTAGCCAAGTCCCTGTTTTGTTATTGAATCTTATGTTTTGTTAATTTGTTTTTGGCTTTTTTTGTATTTCTTCGTTCTTTTAACAGAGAATTCAAATAAGCTAGACTGTGCTGATCACTATAATGAATGATTCATAGAGAAAAAAGGGTTCAAGTTCGGCTAGGAAATTAGTGAAATTAAAAAGATTCCAGATCTCCAGTGCATTGGTTTTTTTTTTCCTATGAAAGCAGAAGCTTTTGTGTCTTTGCAGAGCAGAAATATAAATGGGTTCAAGCTATCTACGTTTGCTTTCTTACACTAAACAATTGAGCTTTTATGCCAACCATGGCAACCACGAGCAGACTCTTTCTCTTTTCCACCACATGCAGGCCTCACTAGCCCTTGGTTTAGACGCCCATGTTTTCTCTCTTGTTCTCAAGTCCTGCACCGCCCTCCGAAGACCACATTTGGGCATTGCCATCCATGCTCATTCCGCTAAATCCTCCTTACTCTCAAGCCCATTTGTTGCTTGTGCCCTTGTTGACATGTATGGAAAATCTTTGTCTGTTACACTTGCACGAAAGTTGTTTGACGAAATTCCCCATAGAAGTGTTGTTGTGTGGAATGTCATGCTATCACTCTACGTGCACGCAAACATGTTATTTGGTGCTTTGCAATTGTTTGAAGCTATGGATGTCCCTCCAAATGCCTCATCCTTCAATGCAATAGTTGCAGGCTTGTCAAAATTGGAGGATGGATTCAAGGCCATTGCTTTCTATAGGCAAATGCAACAATGTGGGTTGAAGCCTAATTTAATTACCCTTCTTGCTTTATTACCTGCAAGTGTTGGAGTTGCATCTTTGGACTTGATTAAACAAATTCATGGTTTCGCCATGAGAAACGATATTGGTGCTCATCTTCAGTTAAGCAGTGGCCTTGTTGAGGCCTATGGACGATGTGGATGTCTCTCTTATGCACACAATGTGTTTGATAATATGACCGAAAGAGATGTAGTTGCATGGAGCAGTTTAATATCAGCACATGCTCTTCATGGGGAAGCCAGTACTGCTTTAAACATCTTTCAACAAATGGAATCGTGTAAAGTGCAGCCTGATGAGATTACATTTATAGGGGTGTTGAAAGCTTGTAGCCACGTGGGGTTAGCTAATGAAGCATTGGATTATTTTAATCGTATGCAGAGAGATTATGGTCTACAAGCAAGCAGTGACCATTATTCTTGTTTAGTAGACGTATTGAGCAGGGCAGGGAGATTACATGAGGCGTATGACATTATTCGTGAGATGCCAGTGAGGGTGACTGCTAAAGCTTGGGGAGCCCTTCTTGGGGCTTGTCGAATTTATGGAGAGTTAGAGCTGGCGGAGATTGCAGGGAAGGCTTTGTTTGAAATAGAGCCTGAAAATGCTGCCAATTATGTGCTGTTGGCTAAAATGTATGCAAGTGTAGGGAGGCATGAGGAAGCTCAAAGAATGAGGAGGGAAATGAAAGAGAGGAGAGTTAAGGTAGTACCTGGAAGTAGTTGGGTTGTTTATCAGGATTGATTGAGAACGGTTGGTGGGTTCTTAATGTCGTATTTGAGTCTTAATGTAGTATTTGAGGAGTGTGTTTATTACTTTAAGAAATTAAATTAATAATTTGGTTGAGACGTTTGATGATTCTGTCCAACGTATCTAAGATGTGAGGATCTCAGGTAAATTAATAATTTGGTTGAGATGTTTAATGATTCTATCCAACGTATCTAAGATGTGAGGATCTCATGAGAACATACTCGGTGGAACAACATTAACATGAGTTATGTGGATTTGGCTCAGCTCTTAGTTTTAAAAGCAGTTTGGATCGTTTGGATCGAAGGAATTAGGATGAGAATAAGATTGATGGTAATTAAAAATGCTTAGAAATAATAAGTGTAAATAAATTTATGAAAATTTAGGATGTATGTATGTATCTGGTTGTGTATGGAAATGTTATTAAGAATGTATGAGAATAAATTCTTTTTATTTCATTTGTAAAATTTAATTTTGAGACAATTTAATTATTTAACAATCAAAT

mRNA sequence

ATGGGTTCAAGCTATCTACGTTTGCTTTCTTACACTAAACAATTGAGCTTTTATGCCAACCATGGCAACCACGAGCAGACTCTTTCTCTTTTCCACCACATGCAGGCCTCACTAGCCCTTGGTTTAGACGCCCATGTTTTCTCTCTTGTTCTCAAGTCCTGCACCGCCCTCCGAAGACCACATTTGGGCATTGCCATCCATGCTCATTCCGCTAAATCCTCCTTACTCTCAAGCCCATTTGTTGCTTGTGCCCTTGTTGACATGTATGGAAAATCTTTGTCTGTTACACTTGCACGAAAGTTGTTTGACGAAATTCCCCATAGAAGTGTTGTTGTGTGGAATGTCATGCTATCACTCTACGTGCACGCAAACATGTTATTTGGTGCTTTGCAATTGTTTGAAGCTATGGATGTCCCTCCAAATGCCTCATCCTTCAATGCAATAGTTGCAGGCTTGTCAAAATTGGAGGATGGATTCAAGGCCATTGCTTTCTATAGGCAAATGCAACAATGTGGGTTGAAGCCTAATTTAATTACCCTTCTTGCTTTATTACCTGCAAGTGTTGGAGTTGCATCTTTGGACTTGATTAAACAAATTCATGGTTTCGCCATGAGAAACGATATTGGTGCTCATCTTCAGTTAAGCAGTGGCCTTGTTGAGGCCTATGGACGATGTGGATGTCTCTCTTATGCACACAATGTGTTTGATAATATGACCGAAAGAGATGTAGTTGCATGGAGCAGTTTAATATCAGCACATGCTCTTCATGGGGAAGCCAGTACTGCTTTAAACATCTTTCAACAAATGGAATCGTGTAAAGTGCAGCCTGATGAGATTACATTTATAGGGGTGTTGAAAGCTTGTAGCCACGTGGGGTTAGCTAATGAAGCATTGGATTATTTTAATCGTATGCAGAGAGATTATGGTCTACAAGCAAGCAGTGACCATTATTCTTGTTTAGTAGACGTATTGAGCAGGGCAGGGAGATTACATGAGGCGTATGACATTATTCGTGAGATGCCAGTGAGGGTGACTGCTAAAGCTTGGGGAGCCCTTCTTGGGGCTTGTCGAATTTATGGAGAGTTAGAGCTGGCGGAGATTGCAGGGAAGGCTTTGTTTGAAATAGAGCCTGAAAATGCTGCCAATTATGTGCTGTTGGCTAAAATGTATGCAAGTGTAGGGAGGCATGAGGAAGCTCAAAGAATGAGGAGGGAAATGAAAGAGAGGAGAGTTAAGGTAGTACCTGGAAGTAGTTGGGTTGTTTATCAGGATTGA

Coding sequence (CDS)

ATGGGTTCAAGCTATCTACGTTTGCTTTCTTACACTAAACAATTGAGCTTTTATGCCAACCATGGCAACCACGAGCAGACTCTTTCTCTTTTCCACCACATGCAGGCCTCACTAGCCCTTGGTTTAGACGCCCATGTTTTCTCTCTTGTTCTCAAGTCCTGCACCGCCCTCCGAAGACCACATTTGGGCATTGCCATCCATGCTCATTCCGCTAAATCCTCCTTACTCTCAAGCCCATTTGTTGCTTGTGCCCTTGTTGACATGTATGGAAAATCTTTGTCTGTTACACTTGCACGAAAGTTGTTTGACGAAATTCCCCATAGAAGTGTTGTTGTGTGGAATGTCATGCTATCACTCTACGTGCACGCAAACATGTTATTTGGTGCTTTGCAATTGTTTGAAGCTATGGATGTCCCTCCAAATGCCTCATCCTTCAATGCAATAGTTGCAGGCTTGTCAAAATTGGAGGATGGATTCAAGGCCATTGCTTTCTATAGGCAAATGCAACAATGTGGGTTGAAGCCTAATTTAATTACCCTTCTTGCTTTATTACCTGCAAGTGTTGGAGTTGCATCTTTGGACTTGATTAAACAAATTCATGGTTTCGCCATGAGAAACGATATTGGTGCTCATCTTCAGTTAAGCAGTGGCCTTGTTGAGGCCTATGGACGATGTGGATGTCTCTCTTATGCACACAATGTGTTTGATAATATGACCGAAAGAGATGTAGTTGCATGGAGCAGTTTAATATCAGCACATGCTCTTCATGGGGAAGCCAGTACTGCTTTAAACATCTTTCAACAAATGGAATCGTGTAAAGTGCAGCCTGATGAGATTACATTTATAGGGGTGTTGAAAGCTTGTAGCCACGTGGGGTTAGCTAATGAAGCATTGGATTATTTTAATCGTATGCAGAGAGATTATGGTCTACAAGCAAGCAGTGACCATTATTCTTGTTTAGTAGACGTATTGAGCAGGGCAGGGAGATTACATGAGGCGTATGACATTATTCGTGAGATGCCAGTGAGGGTGACTGCTAAAGCTTGGGGAGCCCTTCTTGGGGCTTGTCGAATTTATGGAGAGTTAGAGCTGGCGGAGATTGCAGGGAAGGCTTTGTTTGAAATAGAGCCTGAAAATGCTGCCAATTATGTGCTGTTGGCTAAAATGTATGCAAGTGTAGGGAGGCATGAGGAAGCTCAAAGAATGAGGAGGGAAATGAAAGAGAGGAGAGTTAAGGTAGTACCTGGAAGTAGTTGGGTTGTTTATCAGGATTGA

Protein sequence

MGSSYLRLLSYTKQLSFYANHGNHEQTLSLFHHMQASLALGLDAHVFSLVLKSCTALRRPHLGIAIHAHSAKSSLLSSPFVACALVDMYGKSLSVTLARKLFDEIPHRSVVVWNVMLSLYVHANMLFGALQLFEAMDVPPNASSFNAIVAGLSKLEDGFKAIAFYRQMQQCGLKPNLITLLALLPASVGVASLDLIKQIHGFAMRNDIGAHLQLSSGLVEAYGRCGCLSYAHNVFDNMTERDVVAWSSLISAHALHGEASTALNIFQQMESCKVQPDEITFIGVLKACSHVGLANEALDYFNRMQRDYGLQASSDHYSCLVDVLSRAGRLHEAYDIIREMPVRVTAKAWGALLGACRIYGELELAEIAGKALFEIEPENAANYVLLAKMYASVGRHEEAQRMRREMKERRVKVVPGSSWVVYQD
Homology
[Close]
BLAST of CsaV3_6G012450 vs. NCBI nr
Match: XP_004139961.2 (PREDICTED: putative pentatricopeptide repeat-containing protein At1g03510 [Cucumis sativus] >KGN46687.1 hypothetical protein Csa_6G124020 [Cucumis sativus])

HSP 1 Score: 838.6 bits (2165), Expect = 9.6e-240
Identity = 424/424 (100.00%), Postives = 424/424 (100.00%), Query Frame = 0 

Query: 1   MGSSYLRLLSYTKQLSFYANHGNHEQTLSLFHHMQASLALGLDAHVFSLVLKSCTALRRP 60
           MGSSYLRLLSYTKQLSFYANHGNHEQTLSLFHHMQASLALGLDAHVFSLVLKSCTALRRP
Sbjct: 1   MGSSYLRLLSYTKQLSFYANHGNHEQTLSLFHHMQASLALGLDAHVFSLVLKSCTALRRP 60

Query: 61  HLGIAIHAHSAKSSLLSSPFVACALVDMYGKSLSVTLARKLFDEIPHRSVVVWNVMLSLY 120
           HLGIAIHAHSAKSSLLSSPFVACALVDMYGKSLSVTLARKLFDEIPHRSVVVWNVMLSLY
Sbjct: 61  HLGIAIHAHSAKSSLLSSPFVACALVDMYGKSLSVTLARKLFDEIPHRSVVVWNVMLSLY 120

Query: 121 VHANMLFGALQLFEAMDVPPNASSFNAIVAGLSKLEDGFKAIAFYRQMQQCGLKPNLITL 180
           VHANMLFGALQLFEAMDVPPNASSFNAIVAGLSKLEDGFKAIAFYRQMQQCGLKPNLITL
Sbjct: 121 VHANMLFGALQLFEAMDVPPNASSFNAIVAGLSKLEDGFKAIAFYRQMQQCGLKPNLITL 180

Query: 181 LALLPASVGVASLDLIKQIHGFAMRNDIGAHLQLSSGLVEAYGRCGCLSYAHNVFDNMTE 240
           LALLPASVGVASLDLIKQIHGFAMRNDIGAHLQLSSGLVEAYGRCGCLSYAHNVFDNMTE
Sbjct: 181 LALLPASVGVASLDLIKQIHGFAMRNDIGAHLQLSSGLVEAYGRCGCLSYAHNVFDNMTE 240

Query: 241 RDVVAWSSLISAHALHGEASTALNIFQQMESCKVQPDEITFIGVLKACSHVGLANEALDY 300
           RDVVAWSSLISAHALHGEASTALNIFQQMESCKVQPDEITFIGVLKACSHVGLANEALDY
Sbjct: 241 RDVVAWSSLISAHALHGEASTALNIFQQMESCKVQPDEITFIGVLKACSHVGLANEALDY 300

Query: 301 FNRMQRDYGLQASSDHYSCLVDVLSRAGRLHEAYDIIREMPVRVTAKAWGALLGACRIYG 360
           FNRMQRDYGLQASSDHYSCLVDVLSRAGRLHEAYDIIREMPVRVTAKAWGALLGACRIYG
Sbjct: 301 FNRMQRDYGLQASSDHYSCLVDVLSRAGRLHEAYDIIREMPVRVTAKAWGALLGACRIYG 360

Query: 361 ELELAEIAGKALFEIEPENAANYVLLAKMYASVGRHEEAQRMRREMKERRVKVVPGSSWV 420
           ELELAEIAGKALFEIEPENAANYVLLAKMYASVGRHEEAQRMRREMKERRVKVVPGSSWV
Sbjct: 361 ELELAEIAGKALFEIEPENAANYVLLAKMYASVGRHEEAQRMRREMKERRVKVVPGSSWV 420

Query: 421 VYQD 425
           VYQD
Sbjct: 421 VYQD 424

[Close]
BLAST of CsaV3_6G012450 vs. NCBI nr
Match: XP_008448216.1 (PREDICTED: putative pentatricopeptide repeat-containing protein At1g03510 [Cucumis melo] >XP_016900559.1 PREDICTED: putative pentatricopeptide repeat-containing protein At1g03510 [Cucumis melo] >XP_016900560.1 PREDICTED: putative pentatricopeptide repeat-containing protein At1g03510 [Cucumis melo] >XP_016900561.1 PREDICTED: putative pentatricopeptide repeat-containing protein At1g03510 [Cucumis melo] >XP_016900562.1 PREDICTED: putative pentatricopeptide repeat-containing protein At1g03510 [Cucumis melo] >XP_016900563.1 PREDICTED: putative pentatricopeptide repeat-containing protein At1g03510 [Cucumis melo])

HSP 1 Score: 810.8 bits (2093), Expect = 2.1e-231
Identity = 410/424 (96.70%), Postives = 417/424 (98.35%), Query Frame = 0 

Query: 1   MGSSYLRLLSYTKQLSFYANHGNHEQTLSLFHHMQASLALGLDAHVFSLVLKSCTALRRP 60
           MGSSYLRL+SY+KQLSFYA HG+HEQTLSLFHHMQASLAL LDAHVFSLVLKSCTALRRP
Sbjct: 1   MGSSYLRLVSYSKQLSFYAKHGSHEQTLSLFHHMQASLALALDAHVFSLVLKSCTALRRP 60

Query: 61  HLGIAIHAHSAKSSLLSSPFVACALVDMYGKSLSVTLARKLFDEIPHRSVVVWNVMLSLY 120
           HLGIAIHAHSAKSSLLSSPFVACALVDMYGKSLSV+LARKLFDEIPHRSVVVWNVMLSLY
Sbjct: 61  HLGIAIHAHSAKSSLLSSPFVACALVDMYGKSLSVSLARKLFDEIPHRSVVVWNVMLSLY 120

Query: 121 VHANMLFGALQLFEAMDVPPNASSFNAIVAGLSKLEDGFKAIAFYRQMQQCGLKPNLITL 180
           VH+NMLFGALQLFEAMDVPPNASSFN IVAGLSKLEDGFKAIAFYRQMQQCGLKPNLITL
Sbjct: 121 VHSNMLFGALQLFEAMDVPPNASSFNPIVAGLSKLEDGFKAIAFYRQMQQCGLKPNLITL 180

Query: 181 LALLPASVGVASLDLIKQIHGFAMRNDIGAHLQLSSGLVEAYGRCGCLSYAHNVFDNMTE 240
           LALLPASVGVASLDLIKQIHGFAMRNDIG HLQLSSGLVEAYGRCGCLSYAHNVFDNMTE
Sbjct: 181 LALLPASVGVASLDLIKQIHGFAMRNDIGGHLQLSSGLVEAYGRCGCLSYAHNVFDNMTE 240

Query: 241 RDVVAWSSLISAHALHGEASTALNIFQQMESCKVQPDEITFIGVLKACSHVGLANEALDY 300
           RDVVAWSSLISAHALHGEASTALNIFQQME  KVQPD ITFIGVLKACSHVGLA+EALDY
Sbjct: 241 RDVVAWSSLISAHALHGEASTALNIFQQMELSKVQPDAITFIGVLKACSHVGLADEALDY 300

Query: 301 FNRMQRDYGLQASSDHYSCLVDVLSRAGRLHEAYDIIREMPVRVTAKAWGALLGACRIYG 360
           FNRMQRDYGLQASSDHYSCLVDVLSRAGRLHEA+DIIREMPVRVTAKAWGALLGACRIYG
Sbjct: 301 FNRMQRDYGLQASSDHYSCLVDVLSRAGRLHEAHDIIREMPVRVTAKAWGALLGACRIYG 360

Query: 361 ELELAEIAGKALFEIEPENAANYVLLAKMYASVGRHEEAQRMRREMKERRVKVVPGSSWV 420
           ELELAEIAGKALFEIEPENAANYVLLAKMYASVGRHEEAQRMRREMKERRVKVVPGSSWV
Sbjct: 361 ELELAEIAGKALFEIEPENAANYVLLAKMYASVGRHEEAQRMRREMKERRVKVVPGSSWV 420

Query: 421 VYQD 425
           VYQD
Sbjct: 421 VYQD 424

[Close]
BLAST of CsaV3_6G012450 vs. NCBI nr
Match: XP_022944604.1 (putative pentatricopeptide repeat-containing protein At1g03510 [Cucurbita moschata] >XP_022944605.1 putative pentatricopeptide repeat-containing protein At1g03510 [Cucurbita moschata])

HSP 1 Score: 757.3 bits (1954), Expect = 2.8e-215
Identity = 379/424 (89.39%), Postives = 399/424 (94.10%), Query Frame = 0 

Query: 1   MGSSYLRLLSYTKQLSFYANHGNHEQTLSLFHHMQASLALGLDAHVFSLVLKSCTALRRP 60
           MGS+YLRLLSYTKQLSFYANHGNHEQ L+LFHHMQASLAL LDAHVFSLVLKSCTA+RRP
Sbjct: 1   MGSNYLRLLSYTKQLSFYANHGNHEQALALFHHMQASLALALDAHVFSLVLKSCTAIRRP 60

Query: 61  HLGIAIHAHSAKSSLLSSPFVACALVDMYGKSLSVTLARKLFDEIPHRSVVVWNVMLSLY 120
           HLG AIHAH+ KSSLLSSPFVACALVDMYGKS+SV LARKLFDEIPHR+VV WN MLSLY
Sbjct: 61  HLGTAIHAHATKSSLLSSPFVACALVDMYGKSMSVPLARKLFDEIPHRTVVAWNAMLSLY 120

Query: 121 VHANMLFGALQLFEAMDVPPNASSFNAIVAGLSKLEDGFKAIAFYRQMQQCGLKPNLITL 180
            H+NML  AL+LFEAMDVPPN SSFN I+AGL  L+DGFKAIAFYR+MQQCGLKPNLITL
Sbjct: 121 THSNMLPDALRLFEAMDVPPNTSSFNPIIAGL--LDDGFKAIAFYRKMQQCGLKPNLITL 180

Query: 181 LALLPASVGVASLDLIKQIHGFAMRNDIGAHLQLSSGLVEAYGRCGCLSYAHNVFDNMTE 240
           LALLPASVGVA+LDLIKQIHGFAMRND+G H QLSSGLVEAYGRCGCL+YAHNVFD M E
Sbjct: 181 LALLPASVGVAALDLIKQIHGFAMRNDLGCHPQLSSGLVEAYGRCGCLNYAHNVFDKMHE 240

Query: 241 RDVVAWSSLISAHALHGEASTALNIFQQMESCKVQPDEITFIGVLKACSHVGLANEALDY 300
           RDVVAWSSLISA+ALHGEA TALNIFQQME CKVQPDEITFIGVLKACSHVGLA+EALDY
Sbjct: 241 RDVVAWSSLISAYALHGEARTALNIFQQMELCKVQPDEITFIGVLKACSHVGLADEALDY 300

Query: 301 FNRMQRDYGLQASSDHYSCLVDVLSRAGRLHEAYDIIREMPVRVTAKAWGALLGACRIYG 360
           F+RMQRDYGLQASSDHYSCLVD LSRAGRLHEAY+IIREMPVRVTAKAWGALLGACR YG
Sbjct: 301 FSRMQRDYGLQASSDHYSCLVDALSRAGRLHEAYEIIREMPVRVTAKAWGALLGACRNYG 360

Query: 361 ELELAEIAGKALFEIEPENAANYVLLAKMYASVGRHEEAQRMRREMKERRVKVVPGSSWV 420
           ELELAEIAGKALF+IEPENAANYVLL KMYASVGRHEEAQR+R EMKERRVK VPGSSWV
Sbjct: 361 ELELAEIAGKALFDIEPENAANYVLLGKMYASVGRHEEAQRLRMEMKERRVKAVPGSSWV 420

Query: 421 VYQD 425
           VYQD
Sbjct: 421 VYQD 422

[Close]
BLAST of CsaV3_6G012450 vs. NCBI nr
Match: XP_023512037.1 (putative pentatricopeptide repeat-containing protein At1g03510 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 753.1 bits (1943), Expect = 5.3e-214
Identity = 378/424 (89.15%), Postives = 399/424 (94.10%), Query Frame = 0 

Query: 1   MGSSYLRLLSYTKQLSFYANHGNHEQTLSLFHHMQASLALGLDAHVFSLVLKSCTALRRP 60
           MGS+YLRLLSYTKQLSFYANHGNHEQ L+LFHHMQASLAL LDAHVFSLVLKSCTA+RRP
Sbjct: 1   MGSNYLRLLSYTKQLSFYANHGNHEQALTLFHHMQASLALALDAHVFSLVLKSCTAIRRP 60

Query: 61  HLGIAIHAHSAKSSLLSSPFVACALVDMYGKSLSVTLARKLFDEIPHRSVVVWNVMLSLY 120
           HLG AIHAH+ KSSLLSSPFVACALVDMYGKS+SV+LARKLFDEIPHR+VV WN MLSLY
Sbjct: 61  HLGTAIHAHATKSSLLSSPFVACALVDMYGKSMSVSLARKLFDEIPHRTVVAWNAMLSLY 120

Query: 121 VHANMLFGALQLFEAMDVPPNASSFNAIVAGLSKLEDGFKAIAFYRQMQQCGLKPNLITL 180
            H+NML  AL+LFEAMDVPPN SSFN I+AGL  L+DGFKAIAFYR+MQQCGLKPNLITL
Sbjct: 121 THSNMLPDALRLFEAMDVPPNTSSFNPIIAGL--LDDGFKAIAFYRKMQQCGLKPNLITL 180

Query: 181 LALLPASVGVASLDLIKQIHGFAMRNDIGAHLQLSSGLVEAYGRCGCLSYAHNVFDNMTE 240
           LALLPASVGVA+LDLIKQIHGFAMRND+G H QLSSGLVEAYGRCGCL+YAHNVFD M E
Sbjct: 181 LALLPASVGVAALDLIKQIHGFAMRNDLGCHPQLSSGLVEAYGRCGCLNYAHNVFDKMHE 240

Query: 241 RDVVAWSSLISAHALHGEASTALNIFQQMESCKVQPDEITFIGVLKACSHVGLANEALDY 300
           RDVVA SSLISA+ALHGEA TALNIFQQME CKVQPDEITFIGVLKACSHVGLA+EALDY
Sbjct: 241 RDVVACSSLISAYALHGEARTALNIFQQMELCKVQPDEITFIGVLKACSHVGLADEALDY 300

Query: 301 FNRMQRDYGLQASSDHYSCLVDVLSRAGRLHEAYDIIREMPVRVTAKAWGALLGACRIYG 360
           F+RMQRDYGLQASSDHYSCLVD LSRAGRLHEAY+IIREMPVRVTAKAWGALLGACR YG
Sbjct: 301 FSRMQRDYGLQASSDHYSCLVDALSRAGRLHEAYEIIREMPVRVTAKAWGALLGACRNYG 360

Query: 361 ELELAEIAGKALFEIEPENAANYVLLAKMYASVGRHEEAQRMRREMKERRVKVVPGSSWV 420
           ELELAEIAGKALF+IEPENAANYVLL KMYASVGRHEEAQR+R EMKERRVK VPGSSWV
Sbjct: 361 ELELAEIAGKALFDIEPENAANYVLLGKMYASVGRHEEAQRLRMEMKERRVKAVPGSSWV 420

Query: 421 VYQD 425
           VYQD
Sbjct: 421 VYQD 422

[Close]
BLAST of CsaV3_6G012450 vs. NCBI nr
Match: ADN33897.1 (pentatricopeptide (PPR) repeat-containing protein [Cucumis melo subsp. melo])

HSP 1 Score: 751.9 bits (1940), Expect = 1.2e-213
Identity = 381/391 (97.44%), Postives = 385/391 (98.47%), Query Frame = 0 

Query: 34  MQASLALGLDAHVFSLVLKSCTALRRPHLGIAIHAHSAKSSLLSSPFVACALVDMYGKSL 93
           MQASLAL LDAHVFSLVLKSCTALRRPHLGIAIHAHSAKSSLLSSPFVACALVDMYGKSL
Sbjct: 1   MQASLALALDAHVFSLVLKSCTALRRPHLGIAIHAHSAKSSLLSSPFVACALVDMYGKSL 60

Query: 94  SVTLARKLFDEIPHRSVVVWNVMLSLYVHANMLFGALQLFEAMDVPPNASSFNAIVAGLS 153
           SV+LARKLFDEIPHRSVVVWNVMLSLYVH+NMLFGALQLFEAMDVPPNASSFN IVAGLS
Sbjct: 61  SVSLARKLFDEIPHRSVVVWNVMLSLYVHSNMLFGALQLFEAMDVPPNASSFNPIVAGLS 120

Query: 154 KLEDGFKAIAFYRQMQQCGLKPNLITLLALLPASVGVASLDLIKQIHGFAMRNDIGAHLQ 213
           KLEDGFKAIAFYRQMQQCGLKPNLITLLALLPASVGVASLDLIKQIHGFAMRNDIG HLQ
Sbjct: 121 KLEDGFKAIAFYRQMQQCGLKPNLITLLALLPASVGVASLDLIKQIHGFAMRNDIGGHLQ 180

Query: 214 LSSGLVEAYGRCGCLSYAHNVFDNMTERDVVAWSSLISAHALHGEASTALNIFQQMESCK 273
           LSSGLVEAYGRCGCLSYAHNVFDNMTERDVVAWSSLISAHALHGEASTALNIFQQME  K
Sbjct: 181 LSSGLVEAYGRCGCLSYAHNVFDNMTERDVVAWSSLISAHALHGEASTALNIFQQMELSK 240

Query: 274 VQPDEITFIGVLKACSHVGLANEALDYFNRMQRDYGLQASSDHYSCLVDVLSRAGRLHEA 333
           VQPD ITFIGVLKACSHVGLA+EALDYFNRMQRDYGLQASSDHYSCLVDVLSRAGRLHEA
Sbjct: 241 VQPDAITFIGVLKACSHVGLADEALDYFNRMQRDYGLQASSDHYSCLVDVLSRAGRLHEA 300

Query: 334 YDIIREMPVRVTAKAWGALLGACRIYGELELAEIAGKALFEIEPENAANYVLLAKMYASV 393
           +DIIREMPVRVTAKAWGALLGACRIYGELELAEIAGKALFEIEPENAANYVLLAKMYASV
Sbjct: 301 HDIIREMPVRVTAKAWGALLGACRIYGELELAEIAGKALFEIEPENAANYVLLAKMYASV 360

Query: 394 GRHEEAQRMRREMKERRVKVVPGSSWVVYQD 425
           GRHEEAQRMRREMKERRVKVVPGSSWVVYQD
Sbjct: 361 GRHEEAQRMRREMKERRVKVVPGSSWVVYQD 391

[Close]
BLAST of CsaV3_6G012450 vs. TAIR10
Match: AT1G03510.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 535.8 bits (1379), Expect = 2.4e-152
Identity = 274/423 (64.78%), Postives = 324/423 (76.60%), Query Frame = 0 

Query: 3   SSYLRLLSYTKQLSFYANHGNHEQTLSLFHHMQASLALGLDAHVFSLVLKSCTALRRPHL 62
           SS  +L+S TKQLS YAN GNHEQ L+LF  M +S AL LDAHVFSL LKSC A  RP L
Sbjct: 7   SSCTKLISLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVL 66

Query: 63  GIAIHAHSAKSSLLSSPFVACALVDMYGKSLSVTLARKLFDEIPHRSVVVWNVMLSLYVH 122
           G ++HAHS KS+ LS+PFV CAL+DMYGK LSV+ ARKLFDEIP R+ VVWN M+S Y H
Sbjct: 67  GGSVHAHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTH 126

Query: 123 ANMLFGALQLFEAMDVPPNASSFNAIVAGLSKLEDG-FKAIAFYRQMQQCGLKPNLITLL 182
              +  A++L+EAMDV PN SSFNAI+ GL   EDG ++AI FYR+M +   KPNLITLL
Sbjct: 127 CGKVKEAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLL 186

Query: 183 ALLPASVGVASLDLIKQIHGFAMRNDIGAHLQLSSGLVEAYGRCGCLSYAHNVFDNMTER 242
           AL+ A   + +  LIK+IH +A RN I  H QL SGLVEAYGRCG + Y   VFD+M +R
Sbjct: 187 ALVSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDR 246

Query: 243 DVVAWSSLISAHALHGEASTALNIFQQMESCKVQPDEITFIGVLKACSHVGLANEALDYF 302
           DVVAWSSLISA+ALHG+A +AL  FQ+ME  KV PD+I F+ VLKACSH GLA+EAL YF
Sbjct: 247 DVVAWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYF 306

Query: 303 NRMQRDYGLQASSDHYSCLVDVLSRAGRLHEAYDIIREMPVRVTAKAWGALLGACRIYGE 362
            RMQ DYGL+AS DHYSCLVDVLSR GR  EAY +I+ MP + TAK WGALLGACR YGE
Sbjct: 307 KRMQGDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGE 366

Query: 363 LELAEIAGKALFEIEPENAANYVLLAKMYASVGRHEEAQRMRREMKERRVKVVPGSSWVV 422
           +ELAEIA + L  +EPEN ANYVLL K+Y SVGR EEA+R+R +MKE  VKV PGSSW +
Sbjct: 367 IELAEIAARELLMVEPENPANYVLLGKIYMSVGRQEEAERLRLKMKESGVKVSPGSSWCL 426

Query: 423 YQD 425
           ++D
Sbjct: 427 FKD 429

[Close]
BLAST of CsaV3_6G012450 vs. TAIR10
Match: AT3G57430.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 262.3 bits (669), Expect = 5.1e-70
Identity = 144/415 (34.70%), Postives = 235/415 (56.63%), Query Frame = 0 

Query: 11  YTKQLSFYANHGNHEQTLSLFHHMQASLALGLDAHVFSLVLKSCTALRRPHLGIAIHAHS 70
           +   ++ Y+ + + ++ L LF  M+ S  L  ++   + V+ +C          AIH   
Sbjct: 372 WNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFV 431

Query: 71  AKSSLLSSPFVACALVDMYGKSLSVTLARKLFDEIPHRSVVVWNVMLSLYVHANMLFGAL 130
            K  L    FV   L+DMY +   + +A ++F ++  R +V WN M++ YV +     AL
Sbjct: 432 VKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDAL 491

Query: 131 QLFEAMDVPPNASSFNAIVAGLSKLEDGFKAIAFYRQMQQCGLKPNLITLLALLPASVGV 190
            L   M      +    +  G S++                 LKPN ITL+ +LP+   +
Sbjct: 492 LLLHKMQ-----NLERKVSKGASRV----------------SLKPNSITLMTILPSCAAL 551

Query: 191 ASLDLIKQIHGFAMRNDIGAHLQLSSGLVEAYGRCGCLSYAHNVFDNMTERDVVAWSSLI 250
           ++L   K+IH +A++N++   + + S LV+ Y +CGCL  +  VFD + +++V+ W+ +I
Sbjct: 552 SALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVII 611

Query: 251 SAHALHGEASTALNIFQQMESCKVQPDEITFIGVLKACSHVGLANEALDYFNRMQRDYGL 310
            A+ +HG    A+++ + M    V+P+E+TFI V  ACSH G+ +E L  F  M+ DYG+
Sbjct: 612 MAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGV 671

Query: 311 QASSDHYSCLVDVLSRAGRLHEAYDIIREMPVRVT-AKAWGALLGACRIYGELELAEIAG 370
           + SSDHY+C+VD+L RAGR+ EAY ++  MP     A AW +LLGA RI+  LE+ EIA 
Sbjct: 672 EPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAA 731

Query: 371 KALFEIEPENAANYVLLAKMYASVGRHEEAQRMRREMKERRVKVVPGSSWVVYQD 425
           + L ++EP  A++YVLLA +Y+S G  ++A  +RR MKE+ V+  PG SW+ + D
Sbjct: 732 QNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGD 765

[Close]
BLAST of CsaV3_6G012450 vs. TAIR10
Match: AT3G46790.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 259.2 bits (661), Expect = 4.4e-69
Identity = 147/403 (36.48%), Postives = 221/403 (54.84%), Query Frame = 0 

Query: 22  GNHEQTLSLFHHMQASLALGLDAHVFSLVLKSCTALRRP--HL--GIAIHAHSAKSSLLS 81
           G+ E+ L L+  M   + +  D   ++ VLK+C A      HL  G  IHAH  +    S
Sbjct: 157 GHGEEVLGLYWKMN-RIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSS 216

Query: 82  SPFVACALVDMYGKSLSVTLARKLFDEIPHRSVVVWNVMLSLYVHANMLFGALQLFEAMD 141
             ++   LVDMY +   V  A  +F  +P R+VV W+ M++ Y      F AL+ F  M 
Sbjct: 217 HVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMM 276

Query: 142 VPPNASSFNAIVAGLSKLEDGFKAIAFYRQMQQCGLKPNLITLLALLPASVGVASLDLIK 201
                SS                              PN +T++++L A   +A+L+  K
Sbjct: 277 RETKDSS------------------------------PNSVTMVSVLQACASLAALEQGK 336

Query: 202 QIHGFAMRNDIGAHLQLSSGLVEAYGRCGCLSYAHNVFDNMTERDVVAWSSLISAHALHG 261
            IHG+ +R  + + L + S LV  YGRCG L     VFD M +RDVV+W+SLIS++ +HG
Sbjct: 337 LIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHG 396

Query: 262 EASTALNIFQQMESCKVQPDEITFIGVLKACSHVGLANEALDYFNRMQRDYGLQASSDHY 321
               A+ IF++M +    P  +TF+ VL ACSH GL  E    F  M RD+G++   +HY
Sbjct: 397 YGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHY 456

Query: 322 SCLVDVLSRAGRLHEAYDIIREMPVRVTAKAWGALLGACRIYGELELAEIAGKALFEIEP 381
           +C+VD+L RA RL EA  ++++M      K WG+LLG+CRI+G +ELAE A + LF +EP
Sbjct: 457 ACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEP 516

Query: 382 ENAANYVLLAKMYASVGRHEEAQRMRREMKERRVKVVPGSSWV 421
           +NA NYVLLA +YA     +E +R+++ ++ R ++ +PG  W+
Sbjct: 517 KNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWM 528

[Close]
BLAST of CsaV3_6G012450 vs. TAIR10
Match: AT3G13770.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 251.1 bits (640), Expect = 1.2e-66
Identity = 141/418 (33.73%), Postives = 229/418 (54.78%), Query Frame = 0 

Query: 8   LLSYTKQLSFYANHGNHEQTLSLFHHMQASLALGLDAHVFSLVLKSCTALRRPHLGIAIH 67
           ++S+T  +S Y+  G+  + L++F  M  S     +   F+ VL SC       LG  IH
Sbjct: 118 VVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKP-NEFTFATVLTSCIRASGLGLGKQIH 177

Query: 68  AHSAKSSLLSSPFVACALVDMYGKSLSVTLARKLFDEIPHRSVVVWNVMLSLYVHANMLF 127
               K +  S  FV  +L+DMY K+  +  AR++F+ +P R VV                
Sbjct: 178 GLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVV---------------- 237

Query: 128 GALQLFEAMDVPPNASSFNAIVAGLSKLEDGFKAIAFYRQMQQCGLKPNLITLLALLPAS 187
                           S  AI+AG ++L    +A+  + ++   G+ PN +T  +LL A 
Sbjct: 238 ----------------SCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTAL 297

Query: 188 VGVASLDLIKQIHGFAMRNDIGAHLQLSSGLVEAYGRCGCLSYAHNVFDNMTERDVVAWS 247
            G+A LD  KQ H   +R ++  +  L + L++ Y +CG LSYA  +FDNM ER  ++W+
Sbjct: 298 SGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWN 357

Query: 248 SLISAHALHGEASTALNIFQQM-ESCKVQPDEITFIGVLKACSHVGLANEALDYFNRM-Q 307
           +++  ++ HG     L +F+ M +  +V+PD +T + VL  CSH  + +  L+ F+ M  
Sbjct: 358 AMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVA 417

Query: 308 RDYGLQASSDHYSCLVDVLSRAGRLHEAYDIIREMPVRVTAKAWGALLGACRIYGELELA 367
            +YG +  ++HY C+VD+L RAGR+ EA++ I+ MP + TA   G+LLGACR++  +++ 
Sbjct: 418 GEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIG 477

Query: 368 EIAGKALFEIEPENAANYVLLAKMYASVGRHEEAQRMRREMKERRVKVVPGSSWVVYQ 424
           E  G+ L EIEPENA NYV+L+ +YAS GR  +   +R  M ++ V   PG SW+ ++
Sbjct: 478 ESVGRRLIEIEPENAGNYVILSNLYASAGRWADVNNVRAMMMQKAVTKEPGRSWIQHE 502

[Close]
BLAST of CsaV3_6G012450 vs. TAIR10
Match: AT3G23330.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 248.4 bits (633), Expect = 7.7e-66
Identity = 135/413 (32.69%), Postives = 220/413 (53.27%), Query Frame = 0 

Query: 8   LLSYTKQLSFYANHGNHEQTLSLFHHMQASLALGLDAHVFSLVLKSCTALRRPHLGIAIH 67
           ++SY   ++ YA  G +E  L +   M  +  L  D+   S VL   +       G  IH
Sbjct: 207 VVSYNTIIAGYAQSGMYEDALRMVREM-GTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIH 266

Query: 68  AHSAKSSLLSSPFVACALVDMYGKSLSVTLARKLFDEIPHRSVVVWNVMLSLYVHANMLF 127
            +  +  + S  ++  +LVDMY KS  +  + ++F  +  R  + WN +++ YV      
Sbjct: 267 GYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYN 326

Query: 128 GALQLFEAMDVPPNASSFNAIVAGLSKLEDGFKAIAFYRQMQQCGLKPNLITLLALLPAS 187
            AL+LF                                RQM    +KP  +   +++PA 
Sbjct: 327 EALRLF--------------------------------RQMVTAKVKPGAVAFSSVIPAC 386

Query: 188 VGVASLDLIKQIHGFAMRNDIGAHLQLSSGLVEAYGRCGCLSYAHNVFDNMTERDVVAWS 247
             +A+L L KQ+HG+ +R   G+++ ++S LV+ Y +CG +  A  +FD M   D V+W+
Sbjct: 387 AHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWT 446

Query: 248 SLISAHALHGEASTALNIFQQMESCKVQPDEITFIGVLKACSHVGLANEALDYFNRMQRD 307
           ++I  HALHG    A+++F++M+   V+P+++ F+ VL ACSHVGL +EA  YFN M + 
Sbjct: 447 AIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKV 506

Query: 308 YGLQASSDHYSCLVDVLSRAGRLHEAYDIIREMPVRVTAKAWGALLGACRIYGELELAEI 367
           YGL    +HY+ + D+L RAG+L EAY+ I +M V  T   W  LL +C ++  LELAE 
Sbjct: 507 YGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEK 566

Query: 368 AGKALFEIEPENAANYVLLAKMYASVGRHEEAQRMRREMKERRVKVVPGSSWV 421
             + +F ++ EN   YVL+  MYAS GR +E  ++R  M+++ ++  P  SW+
Sbjct: 567 VAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWI 586

[Close]
BLAST of CsaV3_6G012450 vs. Swiss-Prot
Match: sp|Q9LR72|PPR7_ARATH (Putative pentatricopeptide repeat-containing protein At1g03510 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E3 PE=3 SV=1)

HSP 1 Score: 535.8 bits (1379), Expect = 4.4e-151
Identity = 274/423 (64.78%), Postives = 324/423 (76.60%), Query Frame = 0 

Query: 3   SSYLRLLSYTKQLSFYANHGNHEQTLSLFHHMQASLALGLDAHVFSLVLKSCTALRRPHL 62
           SS  +L+S TKQLS YAN GNHEQ L+LF  M +S AL LDAHVFSL LKSC A  RP L
Sbjct: 7   SSCTKLISLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVL 66

Query: 63  GIAIHAHSAKSSLLSSPFVACALVDMYGKSLSVTLARKLFDEIPHRSVVVWNVMLSLYVH 122
           G ++HAHS KS+ LS+PFV CAL+DMYGK LSV+ ARKLFDEIP R+ VVWN M+S Y H
Sbjct: 67  GGSVHAHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTH 126

Query: 123 ANMLFGALQLFEAMDVPPNASSFNAIVAGLSKLEDG-FKAIAFYRQMQQCGLKPNLITLL 182
              +  A++L+EAMDV PN SSFNAI+ GL   EDG ++AI FYR+M +   KPNLITLL
Sbjct: 127 CGKVKEAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLL 186

Query: 183 ALLPASVGVASLDLIKQIHGFAMRNDIGAHLQLSSGLVEAYGRCGCLSYAHNVFDNMTER 242
           AL+ A   + +  LIK+IH +A RN I  H QL SGLVEAYGRCG + Y   VFD+M +R
Sbjct: 187 ALVSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDR 246

Query: 243 DVVAWSSLISAHALHGEASTALNIFQQMESCKVQPDEITFIGVLKACSHVGLANEALDYF 302
           DVVAWSSLISA+ALHG+A +AL  FQ+ME  KV PD+I F+ VLKACSH GLA+EAL YF
Sbjct: 247 DVVAWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYF 306

Query: 303 NRMQRDYGLQASSDHYSCLVDVLSRAGRLHEAYDIIREMPVRVTAKAWGALLGACRIYGE 362
            RMQ DYGL+AS DHYSCLVDVLSR GR  EAY +I+ MP + TAK WGALLGACR YGE
Sbjct: 307 KRMQGDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGE 366

Query: 363 LELAEIAGKALFEIEPENAANYVLLAKMYASVGRHEEAQRMRREMKERRVKVVPGSSWVV 422
           +ELAEIA + L  +EPEN ANYVLL K+Y SVGR EEA+R+R +MKE  VKV PGSSW +
Sbjct: 367 IELAEIAARELLMVEPENPANYVLLGKIYMSVGRQEEAERLRLKMKESGVKVSPGSSWCL 426

Query: 423 YQD 425
           ++D
Sbjct: 427 FKD 429

[Close]
BLAST of CsaV3_6G012450 vs. Swiss-Prot
Match: sp|Q7Y211|PP285_ARATH (Pentatricopeptide repeat-containing protein At3g57430, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H81 PE=2 SV=2)

HSP 1 Score: 262.3 bits (669), Expect = 9.3e-69
Identity = 144/415 (34.70%), Postives = 235/415 (56.63%), Query Frame = 0 

Query: 11  YTKQLSFYANHGNHEQTLSLFHHMQASLALGLDAHVFSLVLKSCTALRRPHLGIAIHAHS 70
           +   ++ Y+ + + ++ L LF  M+ S  L  ++   + V+ +C          AIH   
Sbjct: 372 WNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFV 431

Query: 71  AKSSLLSSPFVACALVDMYGKSLSVTLARKLFDEIPHRSVVVWNVMLSLYVHANMLFGAL 130
            K  L    FV   L+DMY +   + +A ++F ++  R +V WN M++ YV +     AL
Sbjct: 432 VKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDAL 491

Query: 131 QLFEAMDVPPNASSFNAIVAGLSKLEDGFKAIAFYRQMQQCGLKPNLITLLALLPASVGV 190
            L   M      +    +  G S++                 LKPN ITL+ +LP+   +
Sbjct: 492 LLLHKMQ-----NLERKVSKGASRV----------------SLKPNSITLMTILPSCAAL 551

Query: 191 ASLDLIKQIHGFAMRNDIGAHLQLSSGLVEAYGRCGCLSYAHNVFDNMTERDVVAWSSLI 250
           ++L   K+IH +A++N++   + + S LV+ Y +CGCL  +  VFD + +++V+ W+ +I
Sbjct: 552 SALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVII 611

Query: 251 SAHALHGEASTALNIFQQMESCKVQPDEITFIGVLKACSHVGLANEALDYFNRMQRDYGL 310
            A+ +HG    A+++ + M    V+P+E+TFI V  ACSH G+ +E L  F  M+ DYG+
Sbjct: 612 MAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGV 671

Query: 311 QASSDHYSCLVDVLSRAGRLHEAYDIIREMPVRVT-AKAWGALLGACRIYGELELAEIAG 370
           + SSDHY+C+VD+L RAGR+ EAY ++  MP     A AW +LLGA RI+  LE+ EIA 
Sbjct: 672 EPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAA 731

Query: 371 KALFEIEPENAANYVLLAKMYASVGRHEEAQRMRREMKERRVKVVPGSSWVVYQD 425
           + L ++EP  A++YVLLA +Y+S G  ++A  +RR MKE+ V+  PG SW+ + D
Sbjct: 732 QNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGD 765

[Close]
BLAST of CsaV3_6G012450 vs. Swiss-Prot
Match: sp|Q9STF3|PP265_ARATH (Pentatricopeptide repeat-containing protein At3g46790, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CRR2 PE=2 SV=1)

HSP 1 Score: 259.2 bits (661), Expect = 7.9e-68
Identity = 147/403 (36.48%), Postives = 221/403 (54.84%), Query Frame = 0 

Query: 22  GNHEQTLSLFHHMQASLALGLDAHVFSLVLKSCTALRRP--HL--GIAIHAHSAKSSLLS 81
           G+ E+ L L+  M   + +  D   ++ VLK+C A      HL  G  IHAH  +    S
Sbjct: 157 GHGEEVLGLYWKMN-RIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSS 216

Query: 82  SPFVACALVDMYGKSLSVTLARKLFDEIPHRSVVVWNVMLSLYVHANMLFGALQLFEAMD 141
             ++   LVDMY +   V  A  +F  +P R+VV W+ M++ Y      F AL+ F  M 
Sbjct: 217 HVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMM 276

Query: 142 VPPNASSFNAIVAGLSKLEDGFKAIAFYRQMQQCGLKPNLITLLALLPASVGVASLDLIK 201
                SS                              PN +T++++L A   +A+L+  K
Sbjct: 277 RETKDSS------------------------------PNSVTMVSVLQACASLAALEQGK 336

Query: 202 QIHGFAMRNDIGAHLQLSSGLVEAYGRCGCLSYAHNVFDNMTERDVVAWSSLISAHALHG 261
            IHG+ +R  + + L + S LV  YGRCG L     VFD M +RDVV+W+SLIS++ +HG
Sbjct: 337 LIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHG 396

Query: 262 EASTALNIFQQMESCKVQPDEITFIGVLKACSHVGLANEALDYFNRMQRDYGLQASSDHY 321
               A+ IF++M +    P  +TF+ VL ACSH GL  E    F  M RD+G++   +HY
Sbjct: 397 YGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHY 456

Query: 322 SCLVDVLSRAGRLHEAYDIIREMPVRVTAKAWGALLGACRIYGELELAEIAGKALFEIEP 381
           +C+VD+L RA RL EA  ++++M      K WG+LLG+CRI+G +ELAE A + LF +EP
Sbjct: 457 ACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEP 516

Query: 382 ENAANYVLLAKMYASVGRHEEAQRMRREMKERRVKVVPGSSWV 421
           +NA NYVLLA +YA     +E +R+++ ++ R ++ +PG  W+
Sbjct: 517 KNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWM 528

[Close]
BLAST of CsaV3_6G012450 vs. Swiss-Prot
Match: sp|Q9LIC3|PP227_ARATH (Putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H85 PE=3 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 2.1e-65
Identity = 141/418 (33.73%), Postives = 229/418 (54.78%), Query Frame = 0 

Query: 8   LLSYTKQLSFYANHGNHEQTLSLFHHMQASLALGLDAHVFSLVLKSCTALRRPHLGIAIH 67
           ++S+T  +S Y+  G+  + L++F  M  S     +   F+ VL SC       LG  IH
Sbjct: 118 VVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKP-NEFTFATVLTSCIRASGLGLGKQIH 177

Query: 68  AHSAKSSLLSSPFVACALVDMYGKSLSVTLARKLFDEIPHRSVVVWNVMLSLYVHANMLF 127
               K +  S  FV  +L+DMY K+  +  AR++F+ +P R VV                
Sbjct: 178 GLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVV---------------- 237

Query: 128 GALQLFEAMDVPPNASSFNAIVAGLSKLEDGFKAIAFYRQMQQCGLKPNLITLLALLPAS 187
                           S  AI+AG ++L    +A+  + ++   G+ PN +T  +LL A 
Sbjct: 238 ----------------SCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTAL 297

Query: 188 VGVASLDLIKQIHGFAMRNDIGAHLQLSSGLVEAYGRCGCLSYAHNVFDNMTERDVVAWS 247
            G+A LD  KQ H   +R ++  +  L + L++ Y +CG LSYA  +FDNM ER  ++W+
Sbjct: 298 SGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWN 357

Query: 248 SLISAHALHGEASTALNIFQQM-ESCKVQPDEITFIGVLKACSHVGLANEALDYFNRM-Q 307
           +++  ++ HG     L +F+ M +  +V+PD +T + VL  CSH  + +  L+ F+ M  
Sbjct: 358 AMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVA 417

Query: 308 RDYGLQASSDHYSCLVDVLSRAGRLHEAYDIIREMPVRVTAKAWGALLGACRIYGELELA 367
            +YG +  ++HY C+VD+L RAGR+ EA++ I+ MP + TA   G+LLGACR++  +++ 
Sbjct: 418 GEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIG 477

Query: 368 EIAGKALFEIEPENAANYVLLAKMYASVGRHEEAQRMRREMKERRVKVVPGSSWVVYQ 424
           E  G+ L EIEPENA NYV+L+ +YAS GR  +   +R  M ++ V   PG SW+ ++
Sbjct: 478 ESVGRRLIEIEPENAGNYVILSNLYASAGRWADVNNVRAMMMQKAVTKEPGRSWIQHE 502

[Close]
BLAST of CsaV3_6G012450 vs. Swiss-Prot
Match: sp|Q9LW63|PP251_ARATH (Putative pentatricopeptide repeat-containing protein At3g23330 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H32 PE=3 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 1.4e-64
Identity = 135/413 (32.69%), Postives = 220/413 (53.27%), Query Frame = 0 

Query: 8   LLSYTKQLSFYANHGNHEQTLSLFHHMQASLALGLDAHVFSLVLKSCTALRRPHLGIAIH 67
           ++SY   ++ YA  G +E  L +   M  +  L  D+   S VL   +       G  IH
Sbjct: 207 VVSYNTIIAGYAQSGMYEDALRMVREM-GTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIH 266

Query: 68  AHSAKSSLLSSPFVACALVDMYGKSLSVTLARKLFDEIPHRSVVVWNVMLSLYVHANMLF 127
            +  +  + S  ++  +LVDMY KS  +  + ++F  +  R  + WN +++ YV      
Sbjct: 267 GYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYN 326

Query: 128 GALQLFEAMDVPPNASSFNAIVAGLSKLEDGFKAIAFYRQMQQCGLKPNLITLLALLPAS 187
            AL+LF                                RQM    +KP  +   +++PA 
Sbjct: 327 EALRLF--------------------------------RQMVTAKVKPGAVAFSSVIPAC 386

Query: 188 VGVASLDLIKQIHGFAMRNDIGAHLQLSSGLVEAYGRCGCLSYAHNVFDNMTERDVVAWS 247
             +A+L L KQ+HG+ +R   G+++ ++S LV+ Y +CG +  A  +FD M   D V+W+
Sbjct: 387 AHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWT 446

Query: 248 SLISAHALHGEASTALNIFQQMESCKVQPDEITFIGVLKACSHVGLANEALDYFNRMQRD 307
           ++I  HALHG    A+++F++M+   V+P+++ F+ VL ACSHVGL +EA  YFN M + 
Sbjct: 447 AIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKV 506

Query: 308 YGLQASSDHYSCLVDVLSRAGRLHEAYDIIREMPVRVTAKAWGALLGACRIYGELELAEI 367
           YGL    +HY+ + D+L RAG+L EAY+ I +M V  T   W  LL +C ++  LELAE 
Sbjct: 507 YGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEK 566

Query: 368 AGKALFEIEPENAANYVLLAKMYASVGRHEEAQRMRREMKERRVKVVPGSSWV 421
             + +F ++ EN   YVL+  MYAS GR +E  ++R  M+++ ++  P  SW+
Sbjct: 567 VAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWI 586

[Close]
BLAST of CsaV3_6G012450 vs. TrEMBL
Match: tr|A0A0A0KE48|A0A0A0KE48_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G124020 PE=4 SV=1)

HSP 1 Score: 838.6 bits (2165), Expect = 6.3e-240
Identity = 424/424 (100.00%), Postives = 424/424 (100.00%), Query Frame = 0 

Query: 1   MGSSYLRLLSYTKQLSFYANHGNHEQTLSLFHHMQASLALGLDAHVFSLVLKSCTALRRP 60
           MGSSYLRLLSYTKQLSFYANHGNHEQTLSLFHHMQASLALGLDAHVFSLVLKSCTALRRP
Sbjct: 1   MGSSYLRLLSYTKQLSFYANHGNHEQTLSLFHHMQASLALGLDAHVFSLVLKSCTALRRP 60

Query: 61  HLGIAIHAHSAKSSLLSSPFVACALVDMYGKSLSVTLARKLFDEIPHRSVVVWNVMLSLY 120
           HLGIAIHAHSAKSSLLSSPFVACALVDMYGKSLSVTLARKLFDEIPHRSVVVWNVMLSLY
Sbjct: 61  HLGIAIHAHSAKSSLLSSPFVACALVDMYGKSLSVTLARKLFDEIPHRSVVVWNVMLSLY 120

Query: 121 VHANMLFGALQLFEAMDVPPNASSFNAIVAGLSKLEDGFKAIAFYRQMQQCGLKPNLITL 180
           VHANMLFGALQLFEAMDVPPNASSFNAIVAGLSKLEDGFKAIAFYRQMQQCGLKPNLITL
Sbjct: 121 VHANMLFGALQLFEAMDVPPNASSFNAIVAGLSKLEDGFKAIAFYRQMQQCGLKPNLITL 180

Query: 181 LALLPASVGVASLDLIKQIHGFAMRNDIGAHLQLSSGLVEAYGRCGCLSYAHNVFDNMTE 240
           LALLPASVGVASLDLIKQIHGFAMRNDIGAHLQLSSGLVEAYGRCGCLSYAHNVFDNMTE
Sbjct: 181 LALLPASVGVASLDLIKQIHGFAMRNDIGAHLQLSSGLVEAYGRCGCLSYAHNVFDNMTE 240

Query: 241 RDVVAWSSLISAHALHGEASTALNIFQQMESCKVQPDEITFIGVLKACSHVGLANEALDY 300
           RDVVAWSSLISAHALHGEASTALNIFQQMESCKVQPDEITFIGVLKACSHVGLANEALDY
Sbjct: 241 RDVVAWSSLISAHALHGEASTALNIFQQMESCKVQPDEITFIGVLKACSHVGLANEALDY 300

Query: 301 FNRMQRDYGLQASSDHYSCLVDVLSRAGRLHEAYDIIREMPVRVTAKAWGALLGACRIYG 360
           FNRMQRDYGLQASSDHYSCLVDVLSRAGRLHEAYDIIREMPVRVTAKAWGALLGACRIYG
Sbjct: 301 FNRMQRDYGLQASSDHYSCLVDVLSRAGRLHEAYDIIREMPVRVTAKAWGALLGACRIYG 360

Query: 361 ELELAEIAGKALFEIEPENAANYVLLAKMYASVGRHEEAQRMRREMKERRVKVVPGSSWV 420
           ELELAEIAGKALFEIEPENAANYVLLAKMYASVGRHEEAQRMRREMKERRVKVVPGSSWV
Sbjct: 361 ELELAEIAGKALFEIEPENAANYVLLAKMYASVGRHEEAQRMRREMKERRVKVVPGSSWV 420

Query: 421 VYQD 425
           VYQD
Sbjct: 421 VYQD 424

[Close]
BLAST of CsaV3_6G012450 vs. TrEMBL
Match: tr|A0A1S4DX62|A0A1S4DX62_CUCME (putative pentatricopeptide repeat-containing protein At1g03510 OS=Cucumis melo OX=3656 GN=LOC103490472 PE=4 SV=1)

HSP 1 Score: 810.8 bits (2093), Expect = 1.4e-231
Identity = 410/424 (96.70%), Postives = 417/424 (98.35%), Query Frame = 0 

Query: 1   MGSSYLRLLSYTKQLSFYANHGNHEQTLSLFHHMQASLALGLDAHVFSLVLKSCTALRRP 60
           MGSSYLRL+SY+KQLSFYA HG+HEQTLSLFHHMQASLAL LDAHVFSLVLKSCTALRRP
Sbjct: 1   MGSSYLRLVSYSKQLSFYAKHGSHEQTLSLFHHMQASLALALDAHVFSLVLKSCTALRRP 60

Query: 61  HLGIAIHAHSAKSSLLSSPFVACALVDMYGKSLSVTLARKLFDEIPHRSVVVWNVMLSLY 120
           HLGIAIHAHSAKSSLLSSPFVACALVDMYGKSLSV+LARKLFDEIPHRSVVVWNVMLSLY
Sbjct: 61  HLGIAIHAHSAKSSLLSSPFVACALVDMYGKSLSVSLARKLFDEIPHRSVVVWNVMLSLY 120

Query: 121 VHANMLFGALQLFEAMDVPPNASSFNAIVAGLSKLEDGFKAIAFYRQMQQCGLKPNLITL 180
           VH+NMLFGALQLFEAMDVPPNASSFN IVAGLSKLEDGFKAIAFYRQMQQCGLKPNLITL
Sbjct: 121 VHSNMLFGALQLFEAMDVPPNASSFNPIVAGLSKLEDGFKAIAFYRQMQQCGLKPNLITL 180

Query: 181 LALLPASVGVASLDLIKQIHGFAMRNDIGAHLQLSSGLVEAYGRCGCLSYAHNVFDNMTE 240
           LALLPASVGVASLDLIKQIHGFAMRNDIG HLQLSSGLVEAYGRCGCLSYAHNVFDNMTE
Sbjct: 181 LALLPASVGVASLDLIKQIHGFAMRNDIGGHLQLSSGLVEAYGRCGCLSYAHNVFDNMTE 240

Query: 241 RDVVAWSSLISAHALHGEASTALNIFQQMESCKVQPDEITFIGVLKACSHVGLANEALDY 300
           RDVVAWSSLISAHALHGEASTALNIFQQME  KVQPD ITFIGVLKACSHVGLA+EALDY
Sbjct: 241 RDVVAWSSLISAHALHGEASTALNIFQQMELSKVQPDAITFIGVLKACSHVGLADEALDY 300

Query: 301 FNRMQRDYGLQASSDHYSCLVDVLSRAGRLHEAYDIIREMPVRVTAKAWGALLGACRIYG 360
           FNRMQRDYGLQASSDHYSCLVDVLSRAGRLHEA+DIIREMPVRVTAKAWGALLGACRIYG
Sbjct: 301 FNRMQRDYGLQASSDHYSCLVDVLSRAGRLHEAHDIIREMPVRVTAKAWGALLGACRIYG 360

Query: 361 ELELAEIAGKALFEIEPENAANYVLLAKMYASVGRHEEAQRMRREMKERRVKVVPGSSWV 420
           ELELAEIAGKALFEIEPENAANYVLLAKMYASVGRHEEAQRMRREMKERRVKVVPGSSWV
Sbjct: 361 ELELAEIAGKALFEIEPENAANYVLLAKMYASVGRHEEAQRMRREMKERRVKVVPGSSWV 420

Query: 421 VYQD 425
           VYQD
Sbjct: 421 VYQD 424

[Close]
BLAST of CsaV3_6G012450 vs. TrEMBL
Match: tr|E5GBQ5|E5GBQ5_CUCME (Pentatricopeptide (PPR) repeat-containing protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 751.9 bits (1940), Expect = 7.8e-214
Identity = 381/391 (97.44%), Postives = 385/391 (98.47%), Query Frame = 0 

Query: 34  MQASLALGLDAHVFSLVLKSCTALRRPHLGIAIHAHSAKSSLLSSPFVACALVDMYGKSL 93
           MQASLAL LDAHVFSLVLKSCTALRRPHLGIAIHAHSAKSSLLSSPFVACALVDMYGKSL
Sbjct: 1   MQASLALALDAHVFSLVLKSCTALRRPHLGIAIHAHSAKSSLLSSPFVACALVDMYGKSL 60

Query: 94  SVTLARKLFDEIPHRSVVVWNVMLSLYVHANMLFGALQLFEAMDVPPNASSFNAIVAGLS 153
           SV+LARKLFDEIPHRSVVVWNVMLSLYVH+NMLFGALQLFEAMDVPPNASSFN IVAGLS
Sbjct: 61  SVSLARKLFDEIPHRSVVVWNVMLSLYVHSNMLFGALQLFEAMDVPPNASSFNPIVAGLS 120

Query: 154 KLEDGFKAIAFYRQMQQCGLKPNLITLLALLPASVGVASLDLIKQIHGFAMRNDIGAHLQ 213
           KLEDGFKAIAFYRQMQQCGLKPNLITLLALLPASVGVASLDLIKQIHGFAMRNDIG HLQ
Sbjct: 121 KLEDGFKAIAFYRQMQQCGLKPNLITLLALLPASVGVASLDLIKQIHGFAMRNDIGGHLQ 180

Query: 214 LSSGLVEAYGRCGCLSYAHNVFDNMTERDVVAWSSLISAHALHGEASTALNIFQQMESCK 273
           LSSGLVEAYGRCGCLSYAHNVFDNMTERDVVAWSSLISAHALHGEASTALNIFQQME  K
Sbjct: 181 LSSGLVEAYGRCGCLSYAHNVFDNMTERDVVAWSSLISAHALHGEASTALNIFQQMELSK 240

Query: 274 VQPDEITFIGVLKACSHVGLANEALDYFNRMQRDYGLQASSDHYSCLVDVLSRAGRLHEA 333
           VQPD ITFIGVLKACSHVGLA+EALDYFNRMQRDYGLQASSDHYSCLVDVLSRAGRLHEA
Sbjct: 241 VQPDAITFIGVLKACSHVGLADEALDYFNRMQRDYGLQASSDHYSCLVDVLSRAGRLHEA 300

Query: 334 YDIIREMPVRVTAKAWGALLGACRIYGELELAEIAGKALFEIEPENAANYVLLAKMYASV 393
           +DIIREMPVRVTAKAWGALLGACRIYGELELAEIAGKALFEIEPENAANYVLLAKMYASV
Sbjct: 301 HDIIREMPVRVTAKAWGALLGACRIYGELELAEIAGKALFEIEPENAANYVLLAKMYASV 360

Query: 394 GRHEEAQRMRREMKERRVKVVPGSSWVVYQD 425
           GRHEEAQRMRREMKERRVKVVPGSSWVVYQD
Sbjct: 361 GRHEEAQRMRREMKERRVKVVPGSSWVVYQD 391

[Close]
BLAST of CsaV3_6G012450 vs. TrEMBL
Match: tr|A0A2P4GRZ0|A0A2P4GRZ0_QUESU (Putative pentatricopeptide repeat-containing protein OS=Quercus suber OX=58331 GN=CFP56_42820 PE=4 SV=1)

HSP 1 Score: 626.3 bits (1614), Expect = 5.0e-176
Identity = 310/423 (73.29%), Postives = 364/423 (86.05%), Query Frame = 0 

Query: 3   SSYLRLLSYTKQLSFYANHGNHEQTLSLFHHMQASLALGLDAHVFSLVLKSCTALRRPHL 62
           S+YLRLLS+TK LS + N G H+Q LSLFHH+QASLAL LD HVFSLVLKSC A++RP L
Sbjct: 6   SNYLRLLSFTKLLSSHVNQGRHDQALSLFHHIQASLALALDPHVFSLVLKSCAAIQRPQL 65

Query: 63  GIAIHAHSAKSSLLSSPFVACALVDMYGKSLSVTLARKLFDEIPHRSVVVWNVMLSLYVH 122
           G AIHAH AKSS LSSPFVA ALVDMYGK +S+  AR LFDEIP R+VVVWN M+SLY H
Sbjct: 66  GTAIHAHIAKSSFLSSPFVASALVDMYGKCVSILPARNLFDEIPQRNVVVWNAMISLYTH 125

Query: 123 ANMLFGALQLFEAMDVPPNASSFNAIVAGLSKLEDG-FKAIAFYRQMQQCGLKPNLITLL 182
           +N +  AL+LF+ MD+ PN S++N+I+AGL+KL+DG FKA+A YR+M++ GL PN+ITLL
Sbjct: 126 SNRVPDALKLFQVMDIAPNVSTYNSIIAGLAKLDDGSFKAVALYRKMREMGLIPNVITLL 185

Query: 183 ALLPASVGVASLDLIKQIHGFAMRNDIGAHLQLSSGLVEAYGRCGCLSYAHNVFDNMTER 242
           ALLPA +GVA+L+LIK+IH +A+RNDI +H QLSSGLVEAYGRCGCL  AHNVF  M ER
Sbjct: 186 ALLPACIGVAALNLIKEIHSYAIRNDIYSHPQLSSGLVEAYGRCGCLVNAHNVFWGMKER 245

Query: 243 DVVAWSSLISAHALHGEASTALNIFQQMESCKVQPDEITFIGVLKACSHVGLANEALDYF 302
           D VAWSS+ISA+ALHG+A TAL +FQQME  KVQPD ITF+GVLKACSH GLA+EA+DYF
Sbjct: 246 DAVAWSSIISAYALHGKARTALEMFQQMELAKVQPDGITFLGVLKACSHAGLADEAMDYF 305

Query: 303 NRMQRDYGLQASSDHYSCLVDVLSRAGRLHEAYDIIREMPVRVTAKAWGALLGACRIYGE 362
            RM+ DYG++ASSDHYSCLVD LSRAGRL++AY +IREMPV+VTAKAWGALLGACR YGE
Sbjct: 306 ARMRTDYGVEASSDHYSCLVDALSRAGRLYDAYQVIREMPVKVTAKAWGALLGACRTYGE 365

Query: 363 LELAEIAGKALFEIEPENAANYVLLAKMYASVGRHEEAQRMRREMKERRVKVVPGSSWVV 422
           LELAEIAGKAL EIEP+N ANYVLLA++YAS GRHEEA+RMR EMKE+ VK  PGSSW+V
Sbjct: 366 LELAEIAGKALSEIEPDNPANYVLLARIYASQGRHEEAERMRSEMKEKGVKAAPGSSWIV 425

Query: 423 YQD 425
           YQD
Sbjct: 426 YQD 428

[Close]
BLAST of CsaV3_6G012450 vs. TrEMBL
Match: tr|A0A2I4H812|A0A2I4H812_9ROSI (putative pentatricopeptide repeat-containing protein At1g03510 OS=Juglans regia OX=51240 GN=LOC109014320 PE=4 SV=1)

HSP 1 Score: 612.8 bits (1579), Expect = 5.7e-172
Identity = 305/423 (72.10%), Postives = 362/423 (85.58%), Query Frame = 0 

Query: 3   SSYLRLLSYTKQLSFYANHGNHEQTLSLFHHMQASLALGLDAHVFSLVLKSCTALRRPHL 62
           S+++RLLS TK LS + N G+HE+ L++FHHM ASLAL LD HVFSLVLKSC+A+ RP L
Sbjct: 6   SNFMRLLSLTKLLSSHVNQGHHERALAVFHHMHASLALALDPHVFSLVLKSCSAIHRPQL 65

Query: 63  GIAIHAHSAKSSLLSSPFVACALVDMYGKSLSVTLARKLFDEIPHRSVVVWNVMLSLYVH 122
           G +IHAH AKSS LS+PFVACALVDMYGK +S+  +R+LFDEIP+R+VVVWN M+S+Y  
Sbjct: 66  GTSIHAHVAKSSFLSNPFVACALVDMYGKCVSIYSSRQLFDEIPNRNVVVWNSMISIYTR 125

Query: 123 ANMLFGALQLFEAMDVPPNASSFNAIVAGLSKLEDG-FKAIAFYRQMQQCGLKPNLITLL 182
            N +  AL+LFE MDV PNAS++N+I+AG   L DG FKAI FY +M++ GLKP+LITLL
Sbjct: 126 CNCVPDALRLFEVMDVAPNASTYNSIIAGSVGLADGSFKAIQFYWRMREMGLKPDLITLL 185

Query: 183 ALLPASVGVASLDLIKQIHGFAMRNDIGAHLQLSSGLVEAYGRCGCLSYAHNVFDNMTER 242
           ALLPA V +A+L+LIK++H +A+RNDI +H QLSSGLVEAYGRCGCL +A NVF  M ER
Sbjct: 186 ALLPACVALAALNLIKELHSYAIRNDIDSHTQLSSGLVEAYGRCGCLVHAQNVFRGMMER 245

Query: 243 DVVAWSSLISAHALHGEASTALNIFQQMESCKVQPDEITFIGVLKACSHVGLANEALDYF 302
           DVVAWSSLISA+ALHGEA  AL+IFQQME  +VQPD+ITF+GVLKACSH GLA+EALDYF
Sbjct: 246 DVVAWSSLISAYALHGEARIALDIFQQMELARVQPDDITFLGVLKACSHAGLADEALDYF 305

Query: 303 NRMQRDYGLQASSDHYSCLVDVLSRAGRLHEAYDIIREMPVRVTAKAWGALLGACRIYGE 362
            RM+ +YG++ASSDHYSCLVDVLSRAGRLHEAY +I EMPV+VTAKAWGALLGACR YG+
Sbjct: 306 ARMRTEYGVEASSDHYSCLVDVLSRAGRLHEAYQVILEMPVKVTAKAWGALLGACRTYGD 365

Query: 363 LELAEIAGKALFEIEPENAANYVLLAKMYASVGRHEEAQRMRREMKERRVKVVPGSSWVV 422
            ELAEIAGKAL EIEP+N ANYVLLA +YAS+GRHEEA+RMRREMK+R VK  PGSSWVV
Sbjct: 366 FELAEIAGKALSEIEPDNPANYVLLAGIYASLGRHEEAERMRREMKKRGVKAAPGSSWVV 425

Query: 423 YQD 425
           YQD
Sbjct: 426 YQD 428

The following BLAST results are available for this feature:
BLAST of CsaV3_6G012450 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004139961.29.6e-240100.00PREDICTED: putative pentatricopeptide repeat-containing protein At1g03510 [Cucum... [more]
XP_008448216.12.1e-23196.70PREDICTED: putative pentatricopeptide repeat-containing protein At1g03510 [Cucum... [more]
XP_022944604.12.8e-21589.39putative pentatricopeptide repeat-containing protein At1g03510 [Cucurbita moscha... [more]
XP_023512037.15.3e-21489.15putative pentatricopeptide repeat-containing protein At1g03510 [Cucurbita pepo s... [more]
ADN33897.11.2e-21397.44pentatricopeptide (PPR) repeat-containing protein [Cucumis melo subsp. melo][more]
BLAST of CsaV3_6G012450 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G03510.12.4e-15264.78Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT3G57430.15.1e-7034.70Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT3G46790.14.4e-6936.48Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT3G13770.11.2e-6633.73Pentatricopeptide repeat (PPR) superfamily protein[more]
AT3G23330.17.7e-6632.69Tetratricopeptide repeat (TPR)-like superfamily protein[more]
BLAST of CsaV3_6G012450 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9LR72|PPR7_ARATH4.4e-15164.78Putative pentatricopeptide repeat-containing protein At1g03510 OS=Arabidopsis th... [more]
sp|Q7Y211|PP285_ARATH9.3e-6934.70Pentatricopeptide repeat-containing protein At3g57430, chloroplastic OS=Arabidop... [more]
sp|Q9STF3|PP265_ARATH7.9e-6836.48Pentatricopeptide repeat-containing protein At3g46790, chloroplastic OS=Arabidop... [more]
sp|Q9LIC3|PP227_ARATH2.1e-6533.73Putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial OS... [more]
sp|Q9LW63|PP251_ARATH1.4e-6432.69Putative pentatricopeptide repeat-containing protein At3g23330 OS=Arabidopsis th... [more]
BLAST of CsaV3_6G012450 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KE48|A0A0A0KE48_CUCSA6.3e-240100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G124020 PE=4 SV=1[more]
tr|A0A1S4DX62|A0A1S4DX62_CUCME1.4e-23196.70putative pentatricopeptide repeat-containing protein At1g03510 OS=Cucumis melo O... [more]
tr|E5GBQ5|E5GBQ5_CUCME7.8e-21497.44Pentatricopeptide (PPR) repeat-containing protein OS=Cucumis melo subsp. melo OX... [more]
tr|A0A2P4GRZ0|A0A2P4GRZ0_QUESU5.0e-17673.29Putative pentatricopeptide repeat-containing protein OS=Quercus suber OX=58331 G... [more]
tr|A0A2I4H812|A0A2I4H812_9ROSI5.7e-17272.10putative pentatricopeptide repeat-containing protein At1g03510 OS=Juglans regia ... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR002885Pentatricopeptide_repeat
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_6G012450.1CsaV3_6G012450.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 317..340
e-value: 5.0E-4
score: 18.1
coord: 244..278
e-value: 1.5E-5
score: 22.9
coord: 144..176
e-value: 2.8E-5
score: 22.0
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 144..173
e-value: 0.0093
score: 16.1
coord: 383..410
e-value: 0.024
score: 14.8
coord: 111..136
e-value: 9.3E-4
score: 19.2
coord: 316..341
e-value: 9.9E-4
score: 19.1
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 242..289
e-value: 7.5E-9
score: 35.5
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 313..343
score: 8.462
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 379..413
score: 9.284
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 242..276
score: 10.512
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 7..37
score: 6.522
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 277..307
score: 8.035
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 109..139
score: 7.037
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 211..241
score: 6.171
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 78..108
score: 5.503
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 43..77
score: 5.13
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 141..175
score: 9.997
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 8..214
e-value: 7.3E-24
score: 86.8
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 215..420
e-value: 1.9E-37
score: 131.3
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILYSSF48452TPR-likecoord: 217..403
NoneNo IPR availablePANTHERPTHR24015:SF858SUBFAMILY NOT NAMEDcoord: 3..422
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 3..422