CsaV3_6G008890 (gene) Cucumber (Chinese Long) v3

NameCsaV3_6G008890
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr6 : 7153655 .. 7153870 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATCGTCGGAGGTGATGTTTGAGTTAGTTGTTTAAGTTTCTGTCAGAGTTGGTCATTGGAAGGGTCCTTGGTGTTGGCCACTGGATGGTGTGTTCGTCAAATATGTGGTGCAAATGGTTGGTTACCAAAGTTTTTGTACAAAGCCGATGATCTTAGAGATTTTTCTCACTGGAGGCCAGTGTCACTAGATATTAGAGGTGGTAATCTGAGTTAG

mRNA sequence

ATGATCGTCGGAGGTGATAGTTGGTCATTGGAAGGGTCCTTGGTGTTGGCCACTGGATGGTGTGTTCGTCAAATATGTGGTGCAAATGGTTGGTTACCAAAGTTTTTGTACAAAGCCGATGATCTTAGAGATTTTTCTCACTGGAGGCCAGTGTCACTAGATATTAGAGGTGGTAATCTGAGTTAG

Coding sequence (CDS)

ATGATCGTCGGAGGTGATAGTTGGTCATTGGAAGGGTCCTTGGTGTTGGCCACTGGATGGTGTGTTCGTCAAATATGTGGTGCAAATGGTTGGTTACCAAAGTTTTTGTACAAAGCCGATGATCTTAGAGATTTTTCTCACTGGAGGCCAGTGTCACTAGATATTAGAGGTGGTAATCTGAGTTAG

Protein sequence

MIVGGDSWSLEGSLVLATGWCVRQICGANGWLPKFLYKADDLRDFSHWRPVSLDIRGGNLS
BLAST of CsaV3_6G008890 vs. NCBI nr
Match: KGN46536.1 (hypothetical protein Csa_6G107860 [Cucumis sativus])

HSP 1 Score: 139.8 bits (351), Expect = 3.1e-30
Identity = 61/61 (100.00%), Postives = 61/61 (100.00%), Query Frame = 0

Query: 1  MIVGGDSWSLEGSLVLATGWCVRQICGANGWLPKFLYKADDLRDFSHWRPVSLDIRGGNL 60
          MIVGGDSWSLEGSLVLATGWCVRQICGANGWLPKFLYKADDLRDFSHWRPVSLDIRGGNL
Sbjct: 1  MIVGGDSWSLEGSLVLATGWCVRQICGANGWLPKFLYKADDLRDFSHWRPVSLDIRGGNL 60

Query: 61 S 62
          S
Sbjct: 61 S 61

BLAST of CsaV3_6G008890 vs. TrEMBL
Match: tr|A0A0A0KFN4|A0A0A0KFN4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G107860 PE=4 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 2.1e-30
Identity = 61/61 (100.00%), Postives = 61/61 (100.00%), Query Frame = 0

Query: 1  MIVGGDSWSLEGSLVLATGWCVRQICGANGWLPKFLYKADDLRDFSHWRPVSLDIRGGNL 60
          MIVGGDSWSLEGSLVLATGWCVRQICGANGWLPKFLYKADDLRDFSHWRPVSLDIRGGNL
Sbjct: 1  MIVGGDSWSLEGSLVLATGWCVRQICGANGWLPKFLYKADDLRDFSHWRPVSLDIRGGNL 60

Query: 61 S 62
          S
Sbjct: 61 S 61

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KGN46536.13.1e-30100.00hypothetical protein Csa_6G107860 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A0A0KFN4|A0A0A0KFN4_CUCSA2.1e-30100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G107860 PE=4 SV=1[more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_6G008890.1CsaV3_6G008890.1mRNA


The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_6G008890CSPI06G08510Wild cucumber (PI 183967)cpicucB364
CsaV3_6G008890CsGy6G008600Cucumber (Gy14) v2cgybcucB298
The following gene(s) are paralogous to this gene:

None