CsaV3_6G008870 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGACTACACTATTCTCCTCTTCACTGGAGGTGATGATCTCGAAGAAGACGGCAACGCCCTAGAATACTACTTTACACATGATTCTCCTGATTCCTTAAAGGACATCGTAGCATCTTGCAAAAATCGTTGCGTACTTTTTGATAACAAGACTGAGTGTGAATCAAAAAAATGTGAACAAATGGGGAAGTTGATGGAGATGGTGAATGAGGTAAGGAAGGTAAATGGAGGACAACCTTACATGCATGACTTATGTTCTAGTATGACAGTTGAAACAAAGTTAAAAGAGGTTAAGACCAAACTTGAAAAACAATTGCAAGAGGATGAAAAGGATGCAAGAATTATAGGTGAAAAGAGAGGGGAAGAGAATGTAAAGGAAAAAAGTAGGAACCTTGAAAATCAATTGGCAAAAGCAAGAGAAGAAAGAGTAAATGCAGAGAATAGAACACAAGAGATTCAACGGCAATATAATGATGAAATTAGGAGGCTCAGTCACCAACTACAAAGCGCACTTCAATGA ATGGACTACACTATTCTCCTCTTCACTGGAGGTGATGATCTCGAAGAAGACGGCAACGCCCTAGAATACTACTTTACACATGATTCTCCTGATTCCTTAAAGGACATCGTAGCATCTTGCAAAAATCGTTGCGTACTTTTTGATAACAAGACTGAGTGTGAATCAAAAAAATGTGAACAAATGGGGAAGTTGATGGAGATGGTGAATGAGGTAAGGAAGGTAAATGGAGGACAACCTTACATGCATGACTTATGTTCTAGTATGACAGTTGAAACAAAGTTAAAAGAGGTTAAGACCAAACTTGAAAAACAATTGCAAGAGGATGAAAAGGATGCAAGAATTATAGGTGAAAAGAGAGGGGAAGAGAATGTAAAGGAAAAAAGTAGGAACCTTGAAAATCAATTGGCAAAAGCAAGAGAAGAAAGAGTAAATGCAGAGAATAGAACACAAGAGATTCAACGGCAATATAATGATGAAATTAGGAGGCTCAGTCACCAACTACAAAGCGCACTTCAATGA ATGGACTACACTATTCTCCTCTTCACTGGAGGTGATGATCTCGAAGAAGACGGCAACGCCCTAGAATACTACTTTACACATGATTCTCCTGATTCCTTAAAGGACATCGTAGCATCTTGCAAAAATCGTTGCGTACTTTTTGATAACAAGACTGAGTGTGAATCAAAAAAATGTGAACAAATGGGGAAGTTGATGGAGATGGTGAATGAGGTAAGGAAGGTAAATGGAGGACAACCTTACATGCATGACTTATGTTCTAGTATGACAGTTGAAACAAAGTTAAAAGAGGTTAAGACCAAACTTGAAAAACAATTGCAAGAGGATGAAAAGGATGCAAGAATTATAGGTGAAAAGAGAGGGGAAGAGAATGTAAAGGAAAAAAGTAGGAACCTTGAAAATCAATTGGCAAAAGCAAGAGAAGAAAGAGTAAATGCAGAGAATAGAACACAAGAGATTCAACGGCAATATAATGATGAAATTAGGAGGCTCAGTCACCAACTACAAAGCGCACTTCAATGA MDYTILLFTGGDDLEEDGNALEYYFTHDSPDSLKDIVASCKNRCVLFDNKTECESKKCEQMGKLMEMVNEVRKVNGGQPYMHDLCSSMTVETKLKEVKTKLEKQLQEDEKDARIIGEKRGEENVKEKSRNLENQLAKAREERVNAENRTQEIQRQYNDEIRRLSHQLQSALQ
BLAST of CsaV3_6G008870 vs. NCBI nr
Match: XP_004140620.2 (PREDICTED: protein AIG1-like [Cucumis sativus] >KGN46534.1 hypothetical protein Csa_6G107840 [Cucumis sativus]) HSP 1 Score: 329.7 bits (844), Expect = 5.9e-87 Identity = 171/172 (99.42%), Postives = 172/172 (100.00%), Query Frame = 0
BLAST of CsaV3_6G008870 vs. NCBI nr
Match: XP_004140622.2 (PREDICTED: protein AIG1-like isoform X1 [Cucumis sativus] >KGN46530.1 hypothetical protein Csa_6G106820 [Cucumis sativus]) HSP 1 Score: 320.1 bits (819), Expect = 4.7e-84 Identity = 167/172 (97.09%), Postives = 169/172 (98.26%), Query Frame = 0
BLAST of CsaV3_6G008870 vs. NCBI nr
Match: XP_011656854.1 (PREDICTED: putative protein PHLOEM PROTEIN 2-LIKE A3 isoform X2 [Cucumis sativus]) HSP 1 Score: 320.1 bits (819), Expect = 4.7e-84 Identity = 167/172 (97.09%), Postives = 169/172 (98.26%), Query Frame = 0
BLAST of CsaV3_6G008870 vs. NCBI nr
Match: XP_008459752.1 (PREDICTED: protein AIG1-like [Cucumis melo]) HSP 1 Score: 167.9 bits (424), Expect = 3.0e-38 Identity = 80/95 (84.21%), Postives = 86/95 (90.53%), Query Frame = 0
BLAST of CsaV3_6G008870 vs. NCBI nr
Match: XP_022145663.1 (immune-associated nucleotide-binding protein 9-like [Momordica charantia]) HSP 1 Score: 133.3 bits (334), Expect = 8.1e-28 Identity = 80/172 (46.51%), Postives = 101/172 (58.72%), Query Frame = 0
BLAST of CsaV3_6G008870 vs. TAIR10
Match: AT1G33970.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein) HSP 1 Score: 82.8 bits (203), Expect = 2.3e-16 Identity = 57/162 (35.19%), Postives = 91/162 (56.17%), Query Frame = 0
BLAST of CsaV3_6G008870 vs. TAIR10
Match: AT1G33960.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein) HSP 1 Score: 79.3 bits (194), Expect = 2.5e-15 Identity = 44/118 (37.29%), Postives = 74/118 (62.71%), Query Frame = 0
BLAST of CsaV3_6G008870 vs. TAIR10
Match: AT2G26820.1 (phloem protein 2-A3) HSP 1 Score: 77.0 bits (188), Expect = 1.2e-14 Identity = 57/161 (35.40%), Postives = 91/161 (56.52%), Query Frame = 0
BLAST of CsaV3_6G008870 vs. TAIR10
Match: AT1G33950.1 (Avirulence induced gene (AIG1) family protein) HSP 1 Score: 75.5 bits (184), Expect = 3.6e-14 Identity = 53/160 (33.12%), Postives = 88/160 (55.00%), Query Frame = 0
BLAST of CsaV3_6G008870 vs. TAIR10
Match: AT1G33830.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein) HSP 1 Score: 72.8 bits (177), Expect = 2.4e-13 Identity = 33/84 (39.29%), Postives = 54/84 (64.29%), Query Frame = 0
BLAST of CsaV3_6G008870 vs. Swiss-Prot
Match: sp|F4HT21|IAN9_ARATH (Immune-associated nucleotide-binding protein 9 OS=Arabidopsis thaliana OX=3702 GN=IAN9 PE=2 SV=1) HSP 1 Score: 82.8 bits (203), Expect = 4.1e-15 Identity = 57/162 (35.19%), Postives = 91/162 (56.17%), Query Frame = 0
BLAST of CsaV3_6G008870 vs. Swiss-Prot
Match: sp|P54120|IAN8_ARATH (Immune-associated nucleotide-binding protein 8 OS=Arabidopsis thaliana OX=3702 GN=IAN8 PE=2 SV=1) HSP 1 Score: 79.3 bits (194), Expect = 4.5e-14 Identity = 44/118 (37.29%), Postives = 74/118 (62.71%), Query Frame = 0
BLAST of CsaV3_6G008870 vs. Swiss-Prot
Match: sp|O81025|IAN10_ARATH (Immune-associated nucleotide-binding protein 10 OS=Arabidopsis thaliana OX=3702 GN=IAN10 PE=3 SV=1) HSP 1 Score: 77.0 bits (188), Expect = 2.3e-13 Identity = 57/161 (35.40%), Postives = 91/161 (56.52%), Query Frame = 0
BLAST of CsaV3_6G008870 vs. Swiss-Prot
Match: sp|Q9C8V2|IAN7_ARATH (Immune-associated nucleotide-binding protein 7 OS=Arabidopsis thaliana OX=3702 GN=IAN7 PE=2 SV=1) HSP 1 Score: 75.5 bits (184), Expect = 6.6e-13 Identity = 53/160 (33.12%), Postives = 88/160 (55.00%), Query Frame = 0
BLAST of CsaV3_6G008870 vs. Swiss-Prot
Match: sp|Q9C8U2|IAN1_ARATH (Immune-associated nucleotide-binding protein 1 OS=Arabidopsis thaliana OX=3702 GN=IAN1 PE=3 SV=1) HSP 1 Score: 72.8 bits (177), Expect = 4.2e-12 Identity = 33/84 (39.29%), Postives = 54/84 (64.29%), Query Frame = 0
BLAST of CsaV3_6G008870 vs. TrEMBL
Match: tr|A0A0A0KCJ5|A0A0A0KCJ5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G107840 PE=4 SV=1) HSP 1 Score: 329.7 bits (844), Expect = 3.9e-87 Identity = 171/172 (99.42%), Postives = 172/172 (100.00%), Query Frame = 0
BLAST of CsaV3_6G008870 vs. TrEMBL
Match: tr|A0A0A0KA09|A0A0A0KA09_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G106820 PE=4 SV=1) HSP 1 Score: 320.1 bits (819), Expect = 3.1e-84 Identity = 167/172 (97.09%), Postives = 169/172 (98.26%), Query Frame = 0
BLAST of CsaV3_6G008870 vs. TrEMBL
Match: tr|A0A1S3CAF4|A0A1S3CAF4_CUCME (protein AIG1-like OS=Cucumis melo OX=3656 GN=LOC103498793 PE=4 SV=1) HSP 1 Score: 167.9 bits (424), Expect = 2.0e-38 Identity = 80/95 (84.21%), Postives = 86/95 (90.53%), Query Frame = 0
BLAST of CsaV3_6G008870 vs. TrEMBL
Match: tr|A0A1S3CS82|A0A1S3CS82_CUCME (protein AIG1-like OS=Cucumis melo OX=3656 GN=LOC103504177 PE=4 SV=1) HSP 1 Score: 120.2 bits (300), Expect = 4.7e-24 Identity = 73/172 (42.44%), Postives = 106/172 (61.63%), Query Frame = 0
BLAST of CsaV3_6G008870 vs. TrEMBL
Match: tr|A0A067DNF5|A0A067DNF5_CITSI (Uncharacterized protein (Fragment) OS=Citrus sinensis OX=2711 GN=CISIN_1g048606mg PE=4 SV=1) HSP 1 Score: 116.3 bits (290), Expect = 6.8e-23 Identity = 80/213 (37.56%), Postives = 113/213 (53.05%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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