CsaV3_6G008860 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ACAGAAAACAGTTTGGGAGACACATTACCATCACACACACAATTATACAAAATGATTCCAAGTTTACCTCCTCCAGTTAGTACTCCCGCGACGGAGACGCCCAAGAAAGAAGGAAGATACAAACTTGACTTCTCGTCCTCCGACGACAAATCCATATTCCCTAAATATTTTGCTTTGCAAAACTATAGCCCAAGACATCCCCAGCCAAGAACTGCACCCTTTCTACAGTATATACATGAAAGTTACCTTGAATTCAATGGCGAACACGGCCTCCTTCATCCATTTTCAAAATTCGAATCCGAAATCTCCGATTCTAACCCCAAACTCATCCACATAAGATGTACGGGCATCAACAAATATTGGGTTCGCAAATCATCCGACTCCAACCACATTGTACCCATTGCCACCAAGAAAGAAGACAACGTATCGAAATCGTCGTGCACTTTGTTCGAGCCAATCTATGATGCCAAATATAAGGCTTACCGCTTTCGTCACGTGCAACTCGGTTATGAGTTGTTTCGTGATAAAACGGACAGGTTATTGGCAAGGGAGAATGGTAGTCCAGATTCTGAACGGGAGGATGCATATGGTGTATTCACCAGAGTTATTGATTGGAATTCGTTATGTGTGTTCCCAAAACACGTGACCTTTAAAGGCTACAATGGCAAGTATTTGAGATTTGAGGGTAAGTATTTGCAAGTATCTGGAGAGCAAAATCATTCATCTCTTATCCATGAGATCTACCCTCAAAAGGATGGAAATCTTATGATCAAGAATATTAAGTCCGAAAGGTTTTGGATCCATGATCCTAATTGGATAGTAGCTACCGCGAGAGGTACGAATCTCATACTTAACTCCAACGGCAAAAGTTCCACATCCTTCTGTTTTTAAAATTCTAAAGATTACATGTATAAACACTTTGTTATCCATTGCTTACCAAATTTTCAAAGACACCAAGCCTAATTTTTCTTTTTAAAAAAACATACACTTTAAAATATCGTTTTCAGGGTAGAATTTAAAATTCATAAATTTTTTTAAAACTCATGATAGAAAATTGACAATAGTTTAATTTTCAACCAAACCAGAAAAAACTAAATAGTTACCGAATAATAATAAATTTAAAACAAAATTTTGACTTGTTCTTTCAACAGATATTATTAACTAAGATTAATATCTATTGATCAACTTATGAATGATATATCTCTAGTTTTGATATACCAATTTTGATTGATATTATTAACCAAAGTTTATCATTGATGAAGATCTTATCTGTGTGTGTGATCGTAGGTGTATGCGTCTATTCATAGTTGTTTACATGCTCATAATTTGTTATTATCTTTAATTATTATTAGTTTATCATATCAATAACTTAGAAATAATAGTATATAACATCACGTTGTTTACTAAAGTTACTATTTTCTTTTCATGTTCATTTGTTTTTTTTCTTCTTCTTTTTCAAGTTTTATCATTTTTATAGCACCATATCCAGAATGATAAATTTTATTTTAGTGATATATATTTTGAAATTTCTTTCTATCCATGATTAGGTTTGATGCTCATGTGCTATGAGGTCTATTATAGTTAGTTTATCATACCAATAAATTATAAATTATAATTTTCTAGTATATATTTATCGTTTTTTTTATTAGTAGCTGTTTGCATATTCATTTGTTATTAGGTTTCATTTATGTCTTATACTATTAAATACAAAAGGTCTATTAATAATATTTATATTTTCTATTTATCAATAATTATTATATTTTACTATTTTCTTTATATAGTATTTGATTTATCGTTAATAACTACGAATTTATATAAATAATATTGTGCTTAGTTTTCCACCCAAACGCTTATTTGCTATGAGATTTAATATCCAGATCATAAGGGGGAAATCATATATTGATGACATTTAAATTTGTGATAGATAGTTAACAATAATGTTGATGGATGGTAGGAATTATTGCAAATATAGCAATTAGATTCAAAATAATTAAGTACAGAACAACATTTAATTTTTTTTTACAAATATAACAAAAGCTGTCAAAGTCTATCGATAATAGAAGTCTAATATATATTACAAATATTTGTTTATCAGTTAAAGATTTTGCTATATTTATAATTTTTATAAATATTATTATATACTTAATTATTCGCTTAATTTTCACAAATGTAACAAAATTAAAAAGATATTTATGACCGTAACAAATAGCACAAGCCCATGTTCTAGATTTGCTATTGAATATTACGGAAGATTCATATTATTTCTCTTTCTTCTTCTATTTTGCGGTCTATTCAACTTCCCTTCCAAATTTATTCTTCTCTTTCAGAATTATTTTTTCTTCTATTTTTAAATGATTCATTTTTCTGTTTAAATTTTCTATTTTATTTTTCTGTTTTCAACGAGATTCTTTTAAACTACTTCATATTTCTCATATTCAAGAATATCGAGATCATTTAAATATCATTTTGACATAATCTAATGCGTCTATCATGCATGGTCCACGTGATCGTTTAAATTTAAAATCTTTTTTATCATTATTTAAATTGATCTAAAACAATCACGTTGACATGATCTAAACAATTGTTAACCATAGTTAACATGATCATTAGATTTGAAGTTTTTAACGATCATTTACATTGGCTACATGATAATCACTTACCATAATCGTTTGTCATGGTTAACACGATCGTTTAATATAGTTAACACAATCATTTTATTTGGAAGTATTTTTCTCTATCGTTAAAAAGAACTATACGATCGTGTACCATGAACAAAACGATAGTAGATTATTTGTTTAGACGGTAGTACATGATTGGTTAGAAGTAAATTACTCCCACACATGTGTGGTTGATTAATTGCGTGTTGAATATTGGAGCATTTTTGGTAATTTTCAGTGTGGGCTTCTGGACTTTTTCGACTTTTTCGATTTTAGAATTGTTGTATGGAGTGTAAATGTTTTAATGATTTATTATATTTTCAAAAAAAAATTTAATTTTTATTCTTAAAATTGTTACAGTTGTAATCACCTTCATTCCCAATAAAAACCAATATATGAATGTGATTATGGCTACAACATCAATGAGGTTTGACCTTTTCTTTCTTAATTAACATACCATTTTGGTATACTTCATCATTTGTCCAATTTTAATTCTTAATTTGTTAAATTGTAATAATAATTTGCAGGCTAGAAAATATAATAGGGCGGTATATATGTTTCTAAATCTTGTAGTAAAAATAATAGTAAATAATATCTTTTTAAAAAAGAACAGAAAATATAATCACTAATGAAGGGAAAATGATTAGAATGTTAAAGATGGCGATGTGCTGATGAATAATACCAATTTTTAATGCATATGTTCTATACGTTTTATAATTGTGTCCTCGAGTTCTAAAAATAACAGACATTAATGTAATTTAATGTAATTTAAGCTAAATTGTATAGTTTGATTGAACAGATGGGAATAGAGACGATCCGAACTTATTGTTTCAACCTGTGAGCCTCCACAACAACGTCGTGGCTCTTCGCAGCTTAGGAAACACTGCCTTCTGCGCTATTATATCCGTGGATGACCAGAAAAATTGTTTGAATGCTACTGAATCTGACCCTACTGAAGAAACCCAATTTGAAGTTTCAGAAGATTATATAATATATAGAAGAAAAATAGATATCAACATTCACTATAGGCTTGGAAATGGAAGGATTTATGGGGAGAGAGTTTGGTCAATGGCCAAAGGATATGCCATTAACAAAACCGAAGAACCTGAACAAATCGAATTCACTTTCTCTTTTGAAGACGAAAGGAACATGAAATGGACCAACATATTTGCTAAACAATTTGAATCCACTAAGTATTTTAATGCTGAGTTTCCTTTGATAAAAGACGGCGAAATTACTATAGGAAATGGTACTGCTCAATCAATCATATGGGGAGAAACTTATCGTAAAAAAAAAATTTTGATGTCTTGTGATACCACCATCACCGTACCTCCCATGTCGAAAGTGAAGGTCAATGTTGTCGTCAAACGGGGGTTTTGTGAAGTTCCTTTTTCGTATATGCATGCCACAACTAGCGCAAAACATAGCGTAATAATACCATACAGAGACGGAGTTTTCACTGACGGAGATTTCACCGGTGTTAATTCATACCAATTTCAGATAACGACTGATGAGGAAGCACTACCTATATGAATTAAAAGGCACGAATTATTGGCATTGTCTTGTGTGTTTTAGTCCCATATGTGTGTGTAGTAATAAAGAATAATGTGGTTCAACCACACACCTTTTATATCCTTCATTTACTTAAAGTTTGTCATTTGTGTGTCCTTATGTTTGGAGGGTGTTTGTGATTCGTGTGTTACATATATTTGAAGTTTAATAATAATGACTGATTTATATTTTTCTATCCGCTCACTCTAT ATGATTCCAAGTTTACCTCCTCCAGTTAGTACTCCCGCGACGGAGACGCCCAAGAAAGAAGGAAGATACAAACTTGACTTCTCGTCCTCCGACGACAAATCCATATTCCCTAAATATTTTGCTTTGCAAAACTATAGCCCAAGACATCCCCAGCCAAGAACTGCACCCTTTCTACAGTATATACATGAAAGTTACCTTGAATTCAATGGCGAACACGGCCTCCTTCATCCATTTTCAAAATTCGAATCCGAAATCTCCGATTCTAACCCCAAACTCATCCACATAAGATGTACGGGCATCAACAAATATTGGGTTCGCAAATCATCCGACTCCAACCACATTGTACCCATTGCCACCAAGAAAGAAGACAACGTATCGAAATCGTCGTGCACTTTGTTCGAGCCAATCTATGATGCCAAATATAAGGCTTACCGCTTTCGTCACGTGCAACTCGGTTATGAGTTGTTTCGTGATAAAACGGACAGGTTATTGGCAAGGGAGAATGGTAGTCCAGATTCTGAACGGGAGGATGCATATGGTGTATTCACCAGAGTTATTGATTGGAATTCGTTATGTGTGTTCCCAAAACACGTGACCTTTAAAGGCTACAATGGCAAGTATTTGAGATTTGAGGGTAAGTATTTGCAAGTATCTGGAGAGCAAAATCATTCATCTCTTATCCATGAGATCTACCCTCAAAAGGATGGAAATCTTATGATCAAGAATATTAAGTCCGAAAGGTTTTGGATCCATGATCCTAATTGGATAGTAGCTACCGCGAGAGATGGGAATAGAGACGATCCGAACTTATTGTTTCAACCTGTGAGCCTCCACAACAACGTCGTGGCTCTTCGCAGCTTAGGAAACACTGCCTTCTGCGCTATTATATCCGTGGATGACCAGAAAAATTGTTTGAATGCTACTGAATCTGACCCTACTGAAGAAACCCAATTTGAAGTTTCAGAAGATTATATAATATATAGAAGAAAAATAGATATCAACATTCACTATAGGCTTGGAAATGGAAGGATTTATGGGGAGAGAGTTTGGTCAATGGCCAAAGGATATGCCATTAACAAAACCGAAGAACCTGAACAAATCGAATTCACTTTCTCTTTTGAAGACGAAAGGAACATGAAATGGACCAACATATTTGCTAAACAATTTGAATCCACTAAGTATTTTAATGCTGAGTTTCCTTTGATAAAAGACGGCGAAATTACTATAGGAAATGGTACTGCTCAATCAATCATATGGGGAGAAACTTATCGTAAAAAAAAAATTTTGATGTCTTGTGATACCACCATCACCGTACCTCCCATGTCGAAAGTGAAGGTCAATGTTGTCGTCAAACGGGGGTTTTGTGAAGTTCCTTTTTCGTATATGCATGCCACAACTAGCGCAAAACATAGCGTAATAATACCATACAGAGACGGAGTTTTCACTGACGGAGATTTCACCGGTGTTAATTCATACCAATTTCAGATAACGACTGATGAGGAAGCACTACCTATATGA ATGATTCCAAGTTTACCTCCTCCAGTTAGTACTCCCGCGACGGAGACGCCCAAGAAAGAAGGAAGATACAAACTTGACTTCTCGTCCTCCGACGACAAATCCATATTCCCTAAATATTTTGCTTTGCAAAACTATAGCCCAAGACATCCCCAGCCAAGAACTGCACCCTTTCTACAGTATATACATGAAAGTTACCTTGAATTCAATGGCGAACACGGCCTCCTTCATCCATTTTCAAAATTCGAATCCGAAATCTCCGATTCTAACCCCAAACTCATCCACATAAGATGTACGGGCATCAACAAATATTGGGTTCGCAAATCATCCGACTCCAACCACATTGTACCCATTGCCACCAAGAAAGAAGACAACGTATCGAAATCGTCGTGCACTTTGTTCGAGCCAATCTATGATGCCAAATATAAGGCTTACCGCTTTCGTCACGTGCAACTCGGTTATGAGTTGTTTCGTGATAAAACGGACAGGTTATTGGCAAGGGAGAATGGTAGTCCAGATTCTGAACGGGAGGATGCATATGGTGTATTCACCAGAGTTATTGATTGGAATTCGTTATGTGTGTTCCCAAAACACGTGACCTTTAAAGGCTACAATGGCAAGTATTTGAGATTTGAGGGTAAGTATTTGCAAGTATCTGGAGAGCAAAATCATTCATCTCTTATCCATGAGATCTACCCTCAAAAGGATGGAAATCTTATGATCAAGAATATTAAGTCCGAAAGGTTTTGGATCCATGATCCTAATTGGATAGTAGCTACCGCGAGAGATGGGAATAGAGACGATCCGAACTTATTGTTTCAACCTGTGAGCCTCCACAACAACGTCGTGGCTCTTCGCAGCTTAGGAAACACTGCCTTCTGCGCTATTATATCCGTGGATGACCAGAAAAATTGTTTGAATGCTACTGAATCTGACCCTACTGAAGAAACCCAATTTGAAGTTTCAGAAGATTATATAATATATAGAAGAAAAATAGATATCAACATTCACTATAGGCTTGGAAATGGAAGGATTTATGGGGAGAGAGTTTGGTCAATGGCCAAAGGATATGCCATTAACAAAACCGAAGAACCTGAACAAATCGAATTCACTTTCTCTTTTGAAGACGAAAGGAACATGAAATGGACCAACATATTTGCTAAACAATTTGAATCCACTAAGTATTTTAATGCTGAGTTTCCTTTGATAAAAGACGGCGAAATTACTATAGGAAATGGTACTGCTCAATCAATCATATGGGGAGAAACTTATCGTAAAAAAAAAATTTTGATGTCTTGTGATACCACCATCACCGTACCTCCCATGTCGAAAGTGAAGGTCAATGTTGTCGTCAAACGGGGGTTTTGTGAAGTTCCTTTTTCGTATATGCATGCCACAACTAGCGCAAAACATAGCGTAATAATACCATACAGAGACGGAGTTTTCACTGACGGAGATTTCACCGGTGTTAATTCATACCAATTTCAGATAACGACTGATGAGGAAGCACTACCTATATGA MIPSLPPPVSTPATETPKKEGRYKLDFSSSDDKSIFPKYFALQNYSPRHPQPRTAPFLQYIHESYLEFNGEHGLLHPFSKFESEISDSNPKLIHIRCTGINKYWVRKSSDSNHIVPIATKKEDNVSKSSCTLFEPIYDAKYKAYRFRHVQLGYELFRDKTDRLLARENGSPDSEREDAYGVFTRVIDWNSLCVFPKHVTFKGYNGKYLRFEGKYLQVSGEQNHSSLIHEIYPQKDGNLMIKNIKSERFWIHDPNWIVATARDGNRDDPNLLFQPVSLHNNVVALRSLGNTAFCAIISVDDQKNCLNATESDPTEETQFEVSEDYIIYRRKIDINIHYRLGNGRIYGERVWSMAKGYAINKTEEPEQIEFTFSFEDERNMKWTNIFAKQFESTKYFNAEFPLIKDGEITIGNGTAQSIIWGETYRKKKILMSCDTTITVPPMSKVKVNVVVKRGFCEVPFSYMHATTSAKHSVIIPYRDGVFTDGDFTGVNSYQFQITTDEEALPI
BLAST of CsaV3_6G008860 vs. NCBI nr
Match: XP_004140503.2 (PREDICTED: uncharacterized protein LOC101208220 [Cucumis sativus] >KGN46533.1 hypothetical protein Csa_6G107830 [Cucumis sativus]) HSP 1 Score: 1037.3 bits (2681), Expect = 1.7e-299 Identity = 504/505 (99.80%), Postives = 505/505 (100.00%), Query Frame = 0
BLAST of CsaV3_6G008860 vs. NCBI nr
Match: XP_004140504.1 (PREDICTED: uncharacterized protein LOC101208463 [Cucumis sativus] >KGN46531.1 hypothetical protein Csa_6G107320 [Cucumis sativus]) HSP 1 Score: 773.1 bits (1995), Expect = 5.9e-220 Identity = 385/508 (75.79%), Postives = 426/508 (83.86%), Query Frame = 0
BLAST of CsaV3_6G008860 vs. NCBI nr
Match: XP_022155409.1 (uncharacterized protein LOC111022557 [Momordica charantia]) HSP 1 Score: 501.5 bits (1290), Expect = 3.3e-138 Identity = 264/510 (51.76%), Postives = 334/510 (65.49%), Query Frame = 0
BLAST of CsaV3_6G008860 vs. NCBI nr
Match: XP_022155413.1 (uncharacterized protein LOC111022561 [Momordica charantia]) HSP 1 Score: 334.0 bits (855), Expect = 9.1e-88 Identity = 181/472 (38.35%), Postives = 277/472 (58.69%), Query Frame = 0
BLAST of CsaV3_6G008860 vs. NCBI nr
Match: XP_016902478.1 (PREDICTED: uncharacterized protein LOC103499072 [Cucumis melo]) HSP 1 Score: 332.8 bits (852), Expect = 2.0e-87 Identity = 168/245 (68.57%), Postives = 194/245 (79.18%), Query Frame = 0
BLAST of CsaV3_6G008860 vs. TrEMBL
Match: tr|A0A0A0KAP4|A0A0A0KAP4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G107830 PE=4 SV=1) HSP 1 Score: 1037.3 bits (2681), Expect = 1.1e-299 Identity = 504/505 (99.80%), Postives = 505/505 (100.00%), Query Frame = 0
BLAST of CsaV3_6G008860 vs. TrEMBL
Match: tr|A0A0A0KFN1|A0A0A0KFN1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G107320 PE=4 SV=1) HSP 1 Score: 773.1 bits (1995), Expect = 3.9e-220 Identity = 385/508 (75.79%), Postives = 426/508 (83.86%), Query Frame = 0
BLAST of CsaV3_6G008860 vs. TrEMBL
Match: tr|A0A1S4E2M9|A0A1S4E2M9_CUCME (uncharacterized protein LOC103499072 OS=Cucumis melo OX=3656 GN=LOC103499072 PE=4 SV=1) HSP 1 Score: 332.8 bits (852), Expect = 1.3e-87 Identity = 168/245 (68.57%), Postives = 194/245 (79.18%), Query Frame = 0
BLAST of CsaV3_6G008860 vs. TrEMBL
Match: tr|A0A2R6R6R8|A0A2R6R6R8_ACTCH (Natterin-3 like OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc10740 PE=4 SV=1) HSP 1 Score: 283.9 bits (725), Expect = 7.2e-73 Identity = 173/464 (37.28%), Postives = 259/464 (55.82%), Query Frame = 0
BLAST of CsaV3_6G008860 vs. TrEMBL
Match: tr|A0A251QDS2|A0A251QDS2_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G097700 PE=4 SV=1) HSP 1 Score: 279.6 bits (714), Expect = 1.4e-71 Identity = 177/467 (37.90%), Postives = 255/467 (54.60%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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