CsaV3_6G008660 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.CTAAAATCTCTCCAATATTGTTTATAATTACAAACCCACTAAATACCACCTTTTATAAACAATTTAACAAGTATGGTAAATTACATTTCACTAAGTTGAATCTCGTATATACACATGACATTGAGCGTTGAAAGGTCGATAGAGAAAAATCTATATGGCCACAAGAGAGACCCATCTATATTATTATATTAATATTTATAATAAAAAGTTTATAGTGAAAATGAGATATAAATAAAAACGAAAGGAAAAGGAAAAATGAAGAGAACGTGGGGGTGAGGGGGAAATGCTTGAGGAGGGAAGTGGGGAATAACCGTCTCAACCGCCACATCGTTTCAAACAAAATTAAATTGAAAAAATGAATCCAAAATCTTCTTCTTCTTCTTGAAGCATAAATCCGCAAGAACAAACCCCCTGCATCCTCAAACACAATCTCATTTACCAACAAAATATTTGAAGATGGATTTCAAGAAACTCAGTGTTCTGTGAAGGGAGAAACCAGCAATATAATAATGGAGGAAAGAAGATCACAATCACATGAAGTTTTAAGGAAAGGGCCATGGAAACTCGAAGAAGATGAAGTACTTTTGAACCATGTTAACCGTTTCGGTCCCAGAGACTGGAGCTCCATTCGATCCAAAGGCCTTCTTCAGCGGACTGGCAAGTCCTGCCGTCTTCGTTGGGTTAATAAACTCAGACCCAACTTGAAAAAGTAACTAATTTTTACTTAACTGCCATTCATTGCCTTCATTTAGTTTTTCTTGATGAATTCCAACGTGTTTGACGTGGGTTTTTTGTGTTTAGTTTTTGTTGTTTGTTCTTCTGCTTGCTAACTGTTTGACAAAATGACTGATAGAGTAATTTCTAGATTATGATTCCTCAAATTGCGGTATGGGTTTTTCTTCCTTGAGATTTCGATTTATTGCCTTAGAATATGAATTGATTTGTTTTGTTTTTCTGTGTTCCCCTAAATCCGGCAAGTGGGTTGTTTTTGTTGACTGATGACTGTTTGTGAAAATGTCTACAAGAGTAATTTCTTGACCATGCTGCTGCTATTCGTGGTTTTTTTTTCAATTTCTTTGAATGTTGTGTTTATCTGTTGGGTTTTCTTGTGCTTCCTCATTTCCGGCAAGTGGGTGCAAGTTCACAGCAGAGGAGGAAAAAATGGTGATAGAATTGCAAGCGCAGTTTGGGAACAAATGGGCAAAGATAGCAACCTACTTGCCTGGCCGGACCGATAATGATGTGAAGAATTTTTGGAGTAGTAGGCAGAAGAGATTGGCTAGGCTTCTGCAGACATCACCTGCTCCATCCAAATTGCAAAGAAGTGCTAAAAAGGAAAAGCCAATCGATTTTGATATTCCCTCCATGGAGGTATTTTCTTTGCTAATTATCTTAGATCTTAGATTTCTTGCAGTTTTGTAGTTTTTTTTTTTAGTTTTCTAAGAGTGTTAGGACTTTTAGTTTCGACTGAGATGCAAAAGGTTTCCAAATTAGGATGCTTAATGGTCATGTCAAAGACGACATACAGGGGCTGTTTTTTCATTTGCTAAATGCATTATGGTGATTAATGTTGTTGGTTTGATCTTTTATTAATTTGCTGACAAAATTTTTTGATCAATGGAGGCATTATGATGCTTCTTTTTGTTGAAGTTTCTGTAGATTTTGATGTTTAGTTCAATTTCCATAACTATCTTTTCATACTTTCAAGGCACCAAAGCTGAGCTCTGCATCAGAGGGAGAGTCATCCTTAAGGCCAATGTCGTGTTTGTCGTCTTGCTGTGCCGAGAATGTTGAACCTCTTAATATGTTCTGCTCGGTGCCAGATCCGTACAGTCCCAAATTACTTGGTTTTGGCCAAGACTTTCTTCAACCTGAATTCAACTCGATCAAATTCGAACAGCAAAGCAATTTCCACACTCAGTCTCTAAGTTCAACATTTTCATCTCAAGGACTCCATGATCCCAACTTTGATGTTTTTCTCGAAACTTTGGATGTTTCTCAATTAACTAACGAAGTTCAATTTCCATCGGGGCTGCAATTCTACGAACCGATGGAATGTTGCTCAAGTCATGATGTTGTAAGGGAGAACGTTGACAACCCCGAAAGCTTCTTCAGCGAGTTTCCTGCAGACATATTTGAACTAGAGCCGCTTCCGAGCTCACCGGAGAACTGATACTTTGCCTCTTTCATTTCTGTAAAATTGTTTGAAACTTTGATTTTGCATCTGTATCTGTGAAATTGGTATGTGTAATGTTTTGCTTGCCTACACAATTGGGGTATACTACACAATGTGTTTGTTTTCTCATTTTTACTTAGAAAAGTGAAAAAGTAATCAGATTTTAGCTGTGTTTTCGGGTTGCAAATTGGTGTATACTCTCAACTAGTTAGTTGATTGAAACTTAACTAAATATTGAATCAATTTAAAAAGGTTTATCAACTCCTTACAATTTTGTTTGAAAAATATCGTAGAATACATTTTAAACCTGATTTGATAACCATTTTTTTAAAAAAATAAACTTGTAGACACAATTTTCACCTTTTACTATTTCTTTCTTTGTCATATACTTAATTTCTAACAATTGTTAAAGAAAACCCAACCAAATTTTTTATTTTCAAAACTAAAAGAAAAATACTTTTCAAAAAGCTAGTTATAT ATGGAGGAAAGAAGATCACAATCACATGAAGTTTTAAGGAAAGGGCCATGGAAACTCGAAGAAGATGAAGTACTTTTGAACCATGTTAACCGTTTCGGTCCCAGAGACTGGAGCTCCATTCGATCCAAAGGCCTTCTTCAGCGGACTGGCAAGTCCTGCCGTCTTCGTTGGGTTAATAAACTCAGACCCAACTTGAAAAATGGGTGCAAGTTCACAGCAGAGGAGGAAAAAATGGTGATAGAATTGCAAGCGCAGTTTGGGAACAAATGGGCAAAGATAGCAACCTACTTGCCTGGCCGGACCGATAATGATGTGAAGAATTTTTGGAGTAGTAGGCAGAAGAGATTGGCTAGGCTTCTGCAGACATCACCTGCTCCATCCAAATTGCAAAGAAGTGCTAAAAAGGAAAAGCCAATCGATTTTGATATTCCCTCCATGGAGGCACCAAAGCTGAGCTCTGCATCAGAGGGAGAGTCATCCTTAAGGCCAATGTCGTGTTTGTCGTCTTGCTGTGCCGAGAATGTTGAACCTCTTAATATGTTCTGCTCGGTGCCAGATCCGTACAGTCCCAAATTACTTGGTTTTGGCCAAGACTTTCTTCAACCTGAATTCAACTCGATCAAATTCGAACAGCAAAGCAATTTCCACACTCAGTCTCTAAGTTCAACATTTTCATCTCAAGGACTCCATGATCCCAACTTTGATGTTTTTCTCGAAACTTTGGATGTTTCTCAATTAACTAACGAAGTTCAATTTCCATCGGGGCTGCAATTCTACGAACCGATGGAATGTTGCTCAAGTCATGATGTTGTAAGGGAGAACGTTGACAACCCCGAAAGCTTCTTCAGCGAGTTTCCTGCAGACATATTTGAACTAGAGCCGCTTCCGAGCTCACCGGAGAACTGA ATGGAGGAAAGAAGATCACAATCACATGAAGTTTTAAGGAAAGGGCCATGGAAACTCGAAGAAGATGAAGTACTTTTGAACCATGTTAACCGTTTCGGTCCCAGAGACTGGAGCTCCATTCGATCCAAAGGCCTTCTTCAGCGGACTGGCAAGTCCTGCCGTCTTCGTTGGGTTAATAAACTCAGACCCAACTTGAAAAATGGGTGCAAGTTCACAGCAGAGGAGGAAAAAATGGTGATAGAATTGCAAGCGCAGTTTGGGAACAAATGGGCAAAGATAGCAACCTACTTGCCTGGCCGGACCGATAATGATGTGAAGAATTTTTGGAGTAGTAGGCAGAAGAGATTGGCTAGGCTTCTGCAGACATCACCTGCTCCATCCAAATTGCAAAGAAGTGCTAAAAAGGAAAAGCCAATCGATTTTGATATTCCCTCCATGGAGGCACCAAAGCTGAGCTCTGCATCAGAGGGAGAGTCATCCTTAAGGCCAATGTCGTGTTTGTCGTCTTGCTGTGCCGAGAATGTTGAACCTCTTAATATGTTCTGCTCGGTGCCAGATCCGTACAGTCCCAAATTACTTGGTTTTGGCCAAGACTTTCTTCAACCTGAATTCAACTCGATCAAATTCGAACAGCAAAGCAATTTCCACACTCAGTCTCTAAGTTCAACATTTTCATCTCAAGGACTCCATGATCCCAACTTTGATGTTTTTCTCGAAACTTTGGATGTTTCTCAATTAACTAACGAAGTTCAATTTCCATCGGGGCTGCAATTCTACGAACCGATGGAATGTTGCTCAAGTCATGATGTTGTAAGGGAGAACGTTGACAACCCCGAAAGCTTCTTCAGCGAGTTTCCTGCAGACATATTTGAACTAGAGCCGCTTCCGAGCTCACCGGAGAACTGA MEERRSQSHEVLRKGPWKLEEDEVLLNHVNRFGPRDWSSIRSKGLLQRTGKSCRLRWVNKLRPNLKNGCKFTAEEEKMVIELQAQFGNKWAKIATYLPGRTDNDVKNFWSSRQKRLARLLQTSPAPSKLQRSAKKEKPIDFDIPSMEAPKLSSASEGESSLRPMSCLSSCCAENVEPLNMFCSVPDPYSPKLLGFGQDFLQPEFNSIKFEQQSNFHTQSLSSTFSSQGLHDPNFDVFLETLDVSQLTNEVQFPSGLQFYEPMECCSSHDVVRENVDNPESFFSEFPADIFELEPLPSSPEN
BLAST of CsaV3_6G008660 vs. NCBI nr
Match: XP_004140627.1 (PREDICTED: myb-related protein Myb4-like [Cucumis sativus]) HSP 1 Score: 614.4 bits (1583), Expect = 2.1e-172 Identity = 301/301 (100.00%), Postives = 301/301 (100.00%), Query Frame = 0
BLAST of CsaV3_6G008660 vs. NCBI nr
Match: XP_008459792.1 (PREDICTED: myb-related protein 308-like [Cucumis melo]) HSP 1 Score: 567.8 bits (1462), Expect = 2.2e-158 Identity = 283/306 (92.48%), Postives = 291/306 (95.10%), Query Frame = 0
BLAST of CsaV3_6G008660 vs. NCBI nr
Match: XP_022933030.1 (transcription factor DUO1-like [Cucurbita moschata]) HSP 1 Score: 488.8 bits (1257), Expect = 1.3e-134 Identity = 249/307 (81.11%), Postives = 268/307 (87.30%), Query Frame = 0
BLAST of CsaV3_6G008660 vs. NCBI nr
Match: XP_023520920.1 (transcription factor DUO1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 488.8 bits (1257), Expect = 1.3e-134 Identity = 248/307 (80.78%), Postives = 268/307 (87.30%), Query Frame = 0
BLAST of CsaV3_6G008660 vs. NCBI nr
Match: XP_022973896.1 (transcription factor DUO1-like [Cucurbita maxima]) HSP 1 Score: 486.1 bits (1250), Expect = 8.6e-134 Identity = 247/307 (80.46%), Postives = 267/307 (86.97%), Query Frame = 0
BLAST of CsaV3_6G008660 vs. TAIR10
Match: AT3G60460.1 (myb-like HTH transcriptional regulator family protein) HSP 1 Score: 224.9 bits (572), Expect = 6.5e-59 Identity = 136/303 (44.88%), Postives = 184/303 (60.73%), Query Frame = 0
BLAST of CsaV3_6G008660 vs. TAIR10
Match: AT5G55020.1 (myb domain protein 120) HSP 1 Score: 135.6 bits (340), Expect = 5.2e-32 Identity = 59/108 (54.63%), Postives = 80/108 (74.07%), Query Frame = 0
BLAST of CsaV3_6G008660 vs. TAIR10
Match: AT5G06100.2 (myb domain protein 33) HSP 1 Score: 134.4 bits (337), Expect = 1.2e-31 Identity = 56/107 (52.34%), Postives = 83/107 (77.57%), Query Frame = 0
BLAST of CsaV3_6G008660 vs. TAIR10
Match: AT2G26960.1 (myb domain protein 81) HSP 1 Score: 133.7 bits (335), Expect = 2.0e-31 Identity = 61/106 (57.55%), Postives = 80/106 (75.47%), Query Frame = 0
BLAST of CsaV3_6G008660 vs. TAIR10
Match: AT4G26930.1 (myb domain protein 97) HSP 1 Score: 133.7 bits (335), Expect = 2.0e-31 Identity = 91/245 (37.14%), Postives = 122/245 (49.80%), Query Frame = 0
BLAST of CsaV3_6G008660 vs. Swiss-Prot
Match: sp|A0A178VEK7|DUO1_ARATH (Transcription factor DUO1 OS=Arabidopsis thaliana OX=3702 GN=DUO1 PE=1 SV=1) HSP 1 Score: 224.9 bits (572), Expect = 1.2e-57 Identity = 136/303 (44.88%), Postives = 184/303 (60.73%), Query Frame = 0
BLAST of CsaV3_6G008660 vs. Swiss-Prot
Match: sp|Q0JB89|MYB58_ORYSJ (Probable transcription factor MYB58 OS=Oryza sativa subsp. japonica OX=39947 GN=MYB58 PE=3 SV=1) HSP 1 Score: 203.4 bits (516), Expect = 3.6e-51 Identity = 110/163 (67.48%), Postives = 121/163 (74.23%), Query Frame = 0
BLAST of CsaV3_6G008660 vs. Swiss-Prot
Match: sp|Q94FL7|MY120_ARATH (Transcription factor MYB120 OS=Arabidopsis thaliana OX=3702 GN=MYB120 PE=2 SV=1) HSP 1 Score: 135.6 bits (340), Expect = 9.3e-31 Identity = 59/108 (54.63%), Postives = 80/108 (74.07%), Query Frame = 0
BLAST of CsaV3_6G008660 vs. Swiss-Prot
Match: sp|Q8W1W6|MYB33_ARATH (Transcription factor MYB33 OS=Arabidopsis thaliana OX=3702 GN=MYB33 PE=2 SV=1) HSP 1 Score: 134.4 bits (337), Expect = 2.1e-30 Identity = 56/107 (52.34%), Postives = 83/107 (77.57%), Query Frame = 0
BLAST of CsaV3_6G008660 vs. Swiss-Prot
Match: sp|Q9S773|MYB97_ARATH (Transcription factor MYB97 OS=Arabidopsis thaliana OX=3702 GN=MYB97 PE=2 SV=1) HSP 1 Score: 133.7 bits (335), Expect = 3.5e-30 Identity = 91/245 (37.14%), Postives = 122/245 (49.80%), Query Frame = 0
BLAST of CsaV3_6G008660 vs. TrEMBL
Match: tr|A0A1S3CB01|A0A1S3CB01_CUCME (myb-related protein 308-like OS=Cucumis melo OX=3656 GN=LOC103498816 PE=4 SV=1) HSP 1 Score: 567.8 bits (1462), Expect = 1.5e-158 Identity = 283/306 (92.48%), Postives = 291/306 (95.10%), Query Frame = 0
BLAST of CsaV3_6G008660 vs. TrEMBL
Match: tr|A0A0A0KFL9|A0A0A0KFL9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G105160 PE=4 SV=1) HSP 1 Score: 477.2 bits (1227), Expect = 2.6e-131 Identity = 234/235 (99.57%), Postives = 235/235 (100.00%), Query Frame = 0
BLAST of CsaV3_6G008660 vs. TrEMBL
Match: tr|A0A2I4HDR6|A0A2I4HDR6_9ROSI (transcription factor MYB57 isoform X1 OS=Juglans regia OX=51240 GN=LOC109016339 PE=4 SV=1) HSP 1 Score: 307.0 bits (785), Expect = 4.7e-80 Identity = 178/318 (55.97%), Postives = 212/318 (66.67%), Query Frame = 0
BLAST of CsaV3_6G008660 vs. TrEMBL
Match: tr|A0A2P5CIM6|A0A2P5CIM6_PARAD (MYB transcription factor OS=Parasponia andersonii OX=3476 GN=PanMYB77 PE=4 SV=1) HSP 1 Score: 291.2 bits (744), Expect = 2.7e-75 Identity = 171/311 (54.98%), Postives = 210/311 (67.52%), Query Frame = 0
BLAST of CsaV3_6G008660 vs. TrEMBL
Match: tr|A0A2P5DAA1|A0A2P5DAA1_9ROSA (MYB transcription factor OS=Trema orientalis OX=63057 GN=TorMYB77 PE=4 SV=1) HSP 1 Score: 289.7 bits (740), Expect = 7.8e-75 Identity = 171/311 (54.98%), Postives = 210/311 (67.52%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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