CsaV3_6G007670 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_6G007670
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionUPF0481 protein At3g47200-like
Locationchr6 : 6178412 .. 6178898 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GTCATTCAAACCCCAAACAAGTAGTATAGTATAAATGTGTATGTGTGTATATATAACCACACGAGGCTTTGCAAAGTGAATGTGCAAAATTTGGGTGAGCAAAGTTTAGAAGAAATTAAACATGGTGGAGGTGGAAGAGGAGCAGACGCTGCTGCCCATGTATCGCAGAAATGAACATAAAGATCAATTACCAATGAACAAGAAAGATGTGGTAATTCAAGTCAAGAACAATCTGGAGAAACAGTTGACGGAATTAGTACTGGTGGACGAGTTCGGATCATCAGGAAAAACCATCAAACCTTCCATTTACAAAATTCCAAAGTTCATGAAAGATATCCAACCGAATGCGTACAAGCCACAGTTGGTGTTGTTTGGGCCATACCATCATGGGGACAAAGATTTGGTTACAATGGAACAGGAAAAACTGAAAGTGTTTCGGCATCTGGTAAAAGGTGATGCTGCCACTTACGAGTCAGATTTTGAGTAA

mRNA sequence

ATGGTGGAGGTGGAAGAGGAGCAGACGCTGCTGCCCATGTATCGCAGAAATGAACATAAAGATCAATTACCAATGAACAAGAAAGATGTGGTAATTCAAGTCAAGAACAATCTGGAGAAACAGTTGACGGAATTAGTACTGGTGGACGAGTTCGGATCATCAGGAAAAACCATCAAACCTTCCATTTACAAAATTCCAAAGTTCATGAAAGATATCCAACCGAATGCGTACAAGCCACAGTTGGTGTTGTTTGGGCCATACCATCATGGGGACAAAGATTTGGTTACAATGGAACAGGAAAAACTGAAAGTGTTTCGGCATCTGGTAAAAGGTGATGCTGCCACTTACGAGTCAGATTTTGAGTAA

Coding sequence (CDS)

ATGGTGGAGGTGGAAGAGGAGCAGACGCTGCTGCCCATGTATCGCAGAAATGAACATAAAGATCAATTACCAATGAACAAGAAAGATGTGGTAATTCAAGTCAAGAACAATCTGGAGAAACAGTTGACGGAATTAGTACTGGTGGACGAGTTCGGATCATCAGGAAAAACCATCAAACCTTCCATTTACAAAATTCCAAAGTTCATGAAAGATATCCAACCGAATGCGTACAAGCCACAGTTGGTGTTGTTTGGGCCATACCATCATGGGGACAAAGATTTGGTTACAATGGAACAGGAAAAACTGAAAGTGTTTCGGCATCTGGTAAAAGGTGATGCTGCCACTTACGAGTCAGATTTTGAGTAA

Protein sequence

MVEVEEEQTLLPMYRRNEHKDQLPMNKKDVVIQVKNNLEKQLTELVLVDEFGSSGKTIKPSIYKIPKFMKDIQPNAYKPQLVLFGPYHHGDKDLVTMEQEKLKVFRHLVKGDAATYESDFE
Homology
[Close]
BLAST of CsaV3_6G007670 vs. NCBI nr
Match: KGN46402.1 (hypothetical protein Csa_6G090770 [Cucumis sativus])

HSP 1 Score: 245.4 bits (625), Expect = 1.0e-61
Identity = 121/121 (100.00%), Postives = 121/121 (100.00%), Query Frame = 0 

Query: 1   MVEVEEEQTLLPMYRRNEHKDQLPMNKKDVVIQVKNNLEKQLTELVLVDEFGSSGKTIKP 60
           MVEVEEEQTLLPMYRRNEHKDQLPMNKKDVVIQVKNNLEKQLTELVLVDEFGSSGKTIKP
Sbjct: 1   MVEVEEEQTLLPMYRRNEHKDQLPMNKKDVVIQVKNNLEKQLTELVLVDEFGSSGKTIKP 60

Query: 61  SIYKIPKFMKDIQPNAYKPQLVLFGPYHHGDKDLVTMEQEKLKVFRHLVKGDAATYESDF 120
           SIYKIPKFMKDIQPNAYKPQLVLFGPYHHGDKDLVTMEQEKLKVFRHLVKGDAATYESDF
Sbjct: 61  SIYKIPKFMKDIQPNAYKPQLVLFGPYHHGDKDLVTMEQEKLKVFRHLVKGDAATYESDF 120

Query: 121 E 122
           E
Sbjct: 121 E 121

[Close]
BLAST of CsaV3_6G007670 vs. NCBI nr
Match: KGN46400.1 (hypothetical protein Csa_6G089270 [Cucumis sativus])

HSP 1 Score: 146.7 bits (369), Expect = 5.0e-32
Identity = 73/119 (61.34%), Postives = 88/119 (73.95%), Query Frame = 0 

Query: 1   MVEVEEEQTLLPMY-RRNEHKDQLPMNKKDVVIQVKNNLEKQLTELVLVDEFGSSGKTIK 60
           M E EE Q LLP+Y R  +HKDQLP+    VV++VK+NL+K L + V V++ GSSGKTIK
Sbjct: 1   MAEAEENQMLLPIYCRSTDHKDQLPIMDNAVVVEVKDNLKKLLMKSVAVEKLGSSGKTIK 60

Query: 61  PSIYKIPKFMKDIQPNAYKPQLVLFGPYHHGDKDLVTMEQEKLKVFRHLVKGDAATYES 119
           PSIYKIP F+KD+   AY P +V FGPYHHG+K+L  MEQEKLKVFRHLV      YES
Sbjct: 61  PSIYKIPNFIKDVHKEAYMPHMVSFGPYHHGEKNLAPMEQEKLKVFRHLVDVKGVDYES 119

[Close]
BLAST of CsaV3_6G007670 vs. NCBI nr
Match: ADN33691.1 (hypothetical protein [Cucumis melo subsp. melo])

HSP 1 Score: 145.2 bits (365), Expect = 1.5e-31
Identity = 81/121 (66.94%), Postives = 94/121 (77.69%), Query Frame = 0 

Query: 1   MVEVEEEQTLLPMYRRNEHKDQLPMNKKDVVIQVKNNLEKQLTEL-VLVDEFGSSGKTIK 60
           MVEVEEE+T LP+   N+HKDQ PM+K DVVI VK+ L++ L +  V V+E  SS KTIK
Sbjct: 1   MVEVEEEETPLPISCINDHKDQFPMDKNDVVINVKDCLKELLMKRPVPVNESPSSEKTIK 60

Query: 61  PSIYKIPKFMKDIQPNAYKPQLVLFGPYHHGDKDLVTMEQEKLKVFRHLVKGD--AATYE 119
           PSIYKIPKFMKDIQ  AY+P LV FGPYHHG + L  ME+EK KVF+HLVKGD  AATYE
Sbjct: 61  PSIYKIPKFMKDIQLKAYEPYLVSFGPYHHGVEHLAPMEKEKQKVFQHLVKGDNNAATYE 120

[Close]
BLAST of CsaV3_6G007670 vs. NCBI nr
Match: XP_016902479.1 (PREDICTED: uncharacterized protein LOC103499077 [Cucumis melo])

HSP 1 Score: 145.2 bits (365), Expect = 1.5e-31
Identity = 81/121 (66.94%), Postives = 94/121 (77.69%), Query Frame = 0 

Query: 1   MVEVEEEQTLLPMYRRNEHKDQLPMNKKDVVIQVKNNLEKQLTEL-VLVDEFGSSGKTIK 60
           MVEVEEE+T LP+   N+HKDQ PM+K DVVI VK+ L++ L +  V V+E  SS KTIK
Sbjct: 477 MVEVEEEETPLPISCINDHKDQFPMDKNDVVINVKDCLKELLMKRPVPVNESPSSEKTIK 536

Query: 61  PSIYKIPKFMKDIQPNAYKPQLVLFGPYHHGDKDLVTMEQEKLKVFRHLVKGD--AATYE 119
           PSIYKIPKFMKDIQ  AY+P LV FGPYHHG + L  ME+EK KVF+HLVKGD  AATYE
Sbjct: 537 PSIYKIPKFMKDIQLKAYEPYLVSFGPYHHGVEHLAPMEKEKQKVFQHLVKGDNNAATYE 596

[Close]
BLAST of CsaV3_6G007670 vs. NCBI nr
Match: ADN33693.1 (hypothetical protein [Cucumis melo subsp. melo])

HSP 1 Score: 126.7 bits (317), Expect = 5.3e-26
Identity = 64/118 (54.24%), Postives = 85/118 (72.03%), Query Frame = 0 

Query: 1   MVEVEEEQTLLPMYRRNEHKDQLPMNKKDVVIQVKNNLEKQLTELVLVDEFGSSGKTIK- 60
           M EVEEEQT LP+Y RN+HK  LP++K  VVI+V++NL+K    + + +        +K 
Sbjct: 16  MSEVEEEQTPLPIYHRNDHKGHLPIDKDSVVIKVRDNLKKLEWSVPVYESQSYLSMPLKR 75

Query: 61  PSIYKIPKFMKDIQPNAYKPQLVLFGPYHHGDKDLVTMEQEKLKVFRHLVKGDAATYE 118
            SIYKIPKFMKDI+P  Y+P +V FGPYHHG+K L  MEQ+K KVF+H+ K +AAT+E
Sbjct: 76  TSIYKIPKFMKDIEPKEYEPHMVSFGPYHHGNKHLHQMEQKKQKVFQHVAKDNAATFE 133

[Close]
BLAST of CsaV3_6G007670 vs. TAIR10
Match: AT3G47250.1 (Plant protein of unknown function (DUF247))

HSP 1 Score: 57.8 bits (138), Expect = 5.5e-09
Identity = 36/114 (31.58%), Postives = 61/114 (53.51%), Query Frame = 0 

Query: 2   VEVEEEQTLLPMYRRNEHKDQLPMNKKDVVIQVKNNLEKQLTELVLVDEFGSSGKTIKPS 61
           + + +E  L P+ +R+E         + VV  +K NL+     L+L++   S+GK     
Sbjct: 16  ISIIDEGPLSPLRQRSE---------RSVVSHIKRNLQSSGKPLILLE---SAGKA-SCC 75

Query: 62  IYKIPKFMKDIQPNAYKPQLVLFGPYHHGDKDLVTMEQEKLKVFRHLVKGDAAT 116
           I++IP  + ++ P AYKP++V  GPYH+G+  L  ++Q K +     V  D AT
Sbjct: 76  IFRIPDSLAEVNPKAYKPKVVSIGPYHYGENHLQMIQQHKFRFLELFV--DRAT 114

[Close]
BLAST of CsaV3_6G007670 vs. TAIR10
Match: AT3G47210.1 (Plant protein of unknown function (DUF247))

HSP 1 Score: 53.9 bits (128), Expect = 8.0e-08
Identity = 23/47 (48.94%), Postives = 33/47 (70.21%), Query Frame = 0 

Query: 62  IYKIPKFMKDIQPNAYKPQLVLFGPYHHGDKDLVTMEQEKLKVFRHL 109
           I+++PK   ++ P AYKP++V  GPYHHG K L  ++Q KL+ F HL
Sbjct: 95  IFRVPKSFAEMNPEAYKPKVVSIGPYHHGRKHLEMIQQHKLR-FLHL 140

[Close]
BLAST of CsaV3_6G007670 vs. TAIR10
Match: AT3G50160.1 (Plant protein of unknown function (DUF247))

HSP 1 Score: 51.2 bits (121), Expect = 5.2e-07
Identity = 25/79 (31.65%), Postives = 46/79 (58.23%), Query Frame = 0 

Query: 31  VIQVKNNLEKQLTELVLV---DEFGSSGKTIKPS-----IYKIPKFMKDIQPNAYKPQLV 90
           V+ +++  E++L E+ ++   D+  + G     S     IY++P ++++    +Y PQ+V
Sbjct: 67  VVSIEDKNEQKLREIWVISLNDKMKTLGDNATTSWDNLCIYRVPPYLQENDTKSYMPQIV 126

Query: 91  LFGPYHHGDKDLVTMEQEK 102
             GPYHHG K L+ ME+ K
Sbjct: 127 SIGPYHHGHKHLMPMERHK 145

[Close]
BLAST of CsaV3_6G007670 vs. TAIR10
Match: AT4G31980.1 (unknown protein)

HSP 1 Score: 50.1 bits (118), Expect = 1.2e-06
Identity = 21/50 (42.00%), Postives = 32/50 (64.00%), Query Frame = 0 

Query: 54  SGKTIKPSIYKIPKFMKDIQPNAYKPQLVLFGPYHHGDKDLVTMEQEKLK 104
           S  + K  IYK+P  ++ + P+AY P+LV FGP H G ++L  ME +K +
Sbjct: 287 SSLSTKCCIYKVPNKLRRLNPDAYTPRLVSFGPLHRGKEELQAMEDQKYR 336

[Close]
BLAST of CsaV3_6G007670 vs. TAIR10
Match: AT3G50130.1 (Plant protein of unknown function (DUF247))

HSP 1 Score: 48.5 bits (114), Expect = 3.4e-06
Identity = 26/92 (28.26%), Postives = 54/92 (58.70%), Query Frame = 0 

Query: 11  LPMYRRNEHKDQLP-MNKKDVVIQVKNNLEKQLTELVLVDEFGSSGKTIKPSIYKIPKFM 70
           L M ++ + ++Q P   +++ VI +++ +E+ L E        ++    K  IY++P+++
Sbjct: 96  LMMRQKLQKQNQKPEETREEWVISIRDKMEQALRE-------DATTSWDKLCIYRVPQYL 155

Query: 71  KDIQPNAYKPQLVLFGPYHHGDKDLVTMEQEK 102
           ++    +Y PQ V  GP+HHG+K L+ M++ K
Sbjct: 156 QENNKKSYFPQTVSLGPFHHGNKHLLPMDRHK 180

[Close]
BLAST of CsaV3_6G007670 vs. Swiss-Prot
Match: sp|Q9SD53|Y3720_ARATH (UPF0481 protein At3g47200 OS=Arabidopsis thaliana OX=3702 GN=At3g47200 PE=2 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 2.3e-04
Identity = 17/45 (37.78%), Postives = 31/45 (68.89%), Query Frame = 0 

Query: 62  IYKIPKFMKDIQPNAYKPQLVLFGPYHHGDKDLVTMEQEKLKVFR 107
           I+++P+    + P AYKP++V  GPYH+G+K L  ++Q K ++ +
Sbjct: 48  IFRVPESFVALNPKAYKPKVVSIGPYHYGEKHLQMIQQHKPRLLQ 92

[Close]
BLAST of CsaV3_6G007670 vs. TrEMBL
Match: tr|A0A0A0KDE1|A0A0A0KDE1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G090770 PE=4 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 6.8e-62
Identity = 121/121 (100.00%), Postives = 121/121 (100.00%), Query Frame = 0 

Query: 1   MVEVEEEQTLLPMYRRNEHKDQLPMNKKDVVIQVKNNLEKQLTELVLVDEFGSSGKTIKP 60
           MVEVEEEQTLLPMYRRNEHKDQLPMNKKDVVIQVKNNLEKQLTELVLVDEFGSSGKTIKP
Sbjct: 1   MVEVEEEQTLLPMYRRNEHKDQLPMNKKDVVIQVKNNLEKQLTELVLVDEFGSSGKTIKP 60

Query: 61  SIYKIPKFMKDIQPNAYKPQLVLFGPYHHGDKDLVTMEQEKLKVFRHLVKGDAATYESDF 120
           SIYKIPKFMKDIQPNAYKPQLVLFGPYHHGDKDLVTMEQEKLKVFRHLVKGDAATYESDF
Sbjct: 61  SIYKIPKFMKDIQPNAYKPQLVLFGPYHHGDKDLVTMEQEKLKVFRHLVKGDAATYESDF 120

Query: 121 E 122
           E
Sbjct: 121 E 121

[Close]
BLAST of CsaV3_6G007670 vs. TrEMBL
Match: tr|A0A0A0K9F5|A0A0A0K9F5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G089270 PE=4 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 3.3e-32
Identity = 73/119 (61.34%), Postives = 88/119 (73.95%), Query Frame = 0 

Query: 1   MVEVEEEQTLLPMY-RRNEHKDQLPMNKKDVVIQVKNNLEKQLTELVLVDEFGSSGKTIK 60
           M E EE Q LLP+Y R  +HKDQLP+    VV++VK+NL+K L + V V++ GSSGKTIK
Sbjct: 1   MAEAEENQMLLPIYCRSTDHKDQLPIMDNAVVVEVKDNLKKLLMKSVAVEKLGSSGKTIK 60

Query: 61  PSIYKIPKFMKDIQPNAYKPQLVLFGPYHHGDKDLVTMEQEKLKVFRHLVKGDAATYES 119
           PSIYKIP F+KD+   AY P +V FGPYHHG+K+L  MEQEKLKVFRHLV      YES
Sbjct: 61  PSIYKIPNFIKDVHKEAYMPHMVSFGPYHHGEKNLAPMEQEKLKVFRHLVDVKGVDYES 119

[Close]
BLAST of CsaV3_6G007670 vs. TrEMBL
Match: tr|A0A1S4E2L7|A0A1S4E2L7_CUCME (uncharacterized protein LOC103499077 OS=Cucumis melo OX=3656 GN=LOC103499077 PE=4 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 9.6e-32
Identity = 81/121 (66.94%), Postives = 94/121 (77.69%), Query Frame = 0 

Query: 1   MVEVEEEQTLLPMYRRNEHKDQLPMNKKDVVIQVKNNLEKQLTEL-VLVDEFGSSGKTIK 60
           MVEVEEE+T LP+   N+HKDQ PM+K DVVI VK+ L++ L +  V V+E  SS KTIK
Sbjct: 477 MVEVEEEETPLPISCINDHKDQFPMDKNDVVINVKDCLKELLMKRPVPVNESPSSEKTIK 536

Query: 61  PSIYKIPKFMKDIQPNAYKPQLVLFGPYHHGDKDLVTMEQEKLKVFRHLVKGD--AATYE 119
           PSIYKIPKFMKDIQ  AY+P LV FGPYHHG + L  ME+EK KVF+HLVKGD  AATYE
Sbjct: 537 PSIYKIPKFMKDIQLKAYEPYLVSFGPYHHGVEHLAPMEKEKQKVFQHLVKGDNNAATYE 596

[Close]
BLAST of CsaV3_6G007670 vs. TrEMBL
Match: tr|E5GB49|E5GB49_CUCME (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 9.6e-32
Identity = 81/121 (66.94%), Postives = 94/121 (77.69%), Query Frame = 0 

Query: 1   MVEVEEEQTLLPMYRRNEHKDQLPMNKKDVVIQVKNNLEKQLTEL-VLVDEFGSSGKTIK 60
           MVEVEEE+T LP+   N+HKDQ PM+K DVVI VK+ L++ L +  V V+E  SS KTIK
Sbjct: 1   MVEVEEEETPLPISCINDHKDQFPMDKNDVVINVKDCLKELLMKRPVPVNESPSSEKTIK 60

Query: 61  PSIYKIPKFMKDIQPNAYKPQLVLFGPYHHGDKDLVTMEQEKLKVFRHLVKGD--AATYE 119
           PSIYKIPKFMKDIQ  AY+P LV FGPYHHG + L  ME+EK KVF+HLVKGD  AATYE
Sbjct: 61  PSIYKIPKFMKDIQLKAYEPYLVSFGPYHHGVEHLAPMEKEKQKVFQHLVKGDNNAATYE 120

[Close]
BLAST of CsaV3_6G007670 vs. TrEMBL
Match: tr|A0A1S3CAU4|A0A1S3CAU4_CUCME (UPF0481 protein At3g47200-like OS=Cucumis melo OX=3656 GN=LOC103498898 PE=4 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 3.5e-26
Identity = 64/118 (54.24%), Postives = 85/118 (72.03%), Query Frame = 0 

Query: 1   MVEVEEEQTLLPMYRRNEHKDQLPMNKKDVVIQVKNNLEKQLTELVLVDEFGSSGKTIK- 60
           M EVEEEQT LP+Y RN+HK  LP++K  VVI+V++NL+K    + + +        +K 
Sbjct: 1   MSEVEEEQTPLPIYHRNDHKGHLPIDKDSVVIKVRDNLKKLEWSVPVYESQSYLSMPLKR 60

Query: 61  PSIYKIPKFMKDIQPNAYKPQLVLFGPYHHGDKDLVTMEQEKLKVFRHLVKGDAATYE 118
            SIYKIPKFMKDI+P  Y+P +V FGPYHHG+K L  MEQ+K KVF+H+ K +AAT+E
Sbjct: 61  TSIYKIPKFMKDIEPKEYEPHMVSFGPYHHGNKHLHQMEQKKQKVFQHVAKDNAATFE 118

The following BLAST results are available for this feature:
BLAST of CsaV3_6G007670 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN46402.11.0e-61100.00hypothetical protein Csa_6G090770 [Cucumis sativus][more]
KGN46400.15.0e-3261.34hypothetical protein Csa_6G089270 [Cucumis sativus][more]
ADN33691.11.5e-3166.94hypothetical protein [Cucumis melo subsp. melo][more]
XP_016902479.11.5e-3166.94PREDICTED: uncharacterized protein LOC103499077 [Cucumis melo][more]
ADN33693.15.3e-2654.24hypothetical protein [Cucumis melo subsp. melo][more]
BLAST of CsaV3_6G007670 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G47250.15.5e-0931.58Plant protein of unknown function (DUF247)[more]
AT3G47210.18.0e-0848.94Plant protein of unknown function (DUF247)[more]
AT3G50160.15.2e-0731.65Plant protein of unknown function (DUF247)[more]
AT4G31980.11.2e-0642.00unknown protein[more]
AT3G50130.13.4e-0628.26Plant protein of unknown function (DUF247)[more]
BLAST of CsaV3_6G007670 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9SD53|Y3720_ARATH2.3e-0437.78UPF0481 protein At3g47200 OS=Arabidopsis thaliana OX=3702 GN=At3g47200 PE=2 SV=1[more]
BLAST of CsaV3_6G007670 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KDE1|A0A0A0KDE1_CUCSA6.8e-62100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G090770 PE=4 SV=1[more]
tr|A0A0A0K9F5|A0A0A0K9F5_CUCSA3.3e-3261.34Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G089270 PE=4 SV=1[more]
tr|A0A1S4E2L7|A0A1S4E2L7_CUCME9.6e-3266.94uncharacterized protein LOC103499077 OS=Cucumis melo OX=3656 GN=LOC103499077 PE=... [more]
tr|E5GB49|E5GB49_CUCME9.6e-3266.94Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1[more]
tr|A0A1S3CAU4|A0A1S3CAU4_CUCME3.5e-2654.24UPF0481 protein At3g47200-like OS=Cucumis melo OX=3656 GN=LOC103498898 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR004158DUF247_pln
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_6G007670.1CsaV3_6G007670.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004158Protein of unknown function DUF247, plantPFAMPF03140DUF247coord: 62..111
e-value: 1.9E-12
score: 47.1
NoneNo IPR availablePANTHERPTHR31549:SF29SUBFAMILY NOT NAMEDcoord: 52..110
NoneNo IPR availablePANTHERPTHR31549FAMILY NOT NAMEDcoord: 52..110

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_6G007670Silver-seed gourdcarcucB0012
CsaV3_6G007670Silver-seed gourdcarcucB1024
CsaV3_6G007670Cucumber (Gy14) v2cgybcucB298
CsaV3_6G007670Cucumber (Gy14) v1cgycucB532
CsaV3_6G007670Cucurbita maxima (Rimu)cmacucB0439
CsaV3_6G007670Cucurbita maxima (Rimu)cmacucB1072
CsaV3_6G007670Cucurbita moschata (Rifu)cmocucB0433
CsaV3_6G007670Cucurbita moschata (Rifu)cmocucB1054
CsaV3_6G007670Cucurbita pepo (Zucchini)cpecucB0166
CsaV3_6G007670Cucurbita pepo (Zucchini)cpecucB0403
CsaV3_6G007670Wild cucumber (PI 183967)cpicucB364
CsaV3_6G007670Bottle gourd (USVL1VR-Ls)cuclsiB424
CsaV3_6G007670Melon (DHL92) v3.5.1cucmeB444
CsaV3_6G007670Melon (DHL92) v3.6.1cucmedB435
CsaV3_6G007670Watermelon (Charleston Gray)cucwcgB497
CsaV3_6G007670Watermelon (97103) v1cucwmB562
CsaV3_6G007670Watermelon (97103) v2cucwmbB487
CsaV3_6G007670Wax gourdcucwgoB549