CsaV3_6G006370 (gene) Cucumber (Chinese Long) v3

NameCsaV3_6G006370
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr6 : 5326590 .. 5326754 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGATTGATGAAAGGTTTCAAAGATGGGGAATTGAGTTGATTGGTGAAGAAGAAGAAGCAATGGAGAAATGGGTTGAGAGAGGAAGAGGAGTGGAGAAGAAAACTTGTGTTGGTAAATTGGCATTTGGAGGTTTTGTTGATAAAACAATGGATAAGACTTGA

mRNA sequence

ATGAAGATTGATGAAAGGTTTCAAAGATGGGGAATTGAGTTGATTGGTGAAGAAGAAGAAGCAATGGAGAAATGGGTTGAGAGAGGAAGAGGAGTGGAGAAGAAAACTTGTGTTGGTAAATTGGCATTTGGAGGTTTTGTTGATAAAACAATGGATAAGACTTGA

Coding sequence (CDS)

ATGAAGATTGATGAAAGGTTTCAAAGATGGGGAATTGAGTTGATTGGTGAAGAAGAAGAAGCAATGGAGAAATGGGTTGAGAGAGGAAGAGGAGTGGAGAAGAAAACTTGTGTTGGTAAATTGGCATTTGGAGGTTTTGTTGATAAAACAATGGATAAGACTTGA

Protein sequence

MKIDERFQRWGIELIGEEEEAMEKWVERGRGVEKKTCVGKLAFGGFVDKTMDKT
BLAST of CsaV3_6G006370 vs. NCBI nr
Match: KGN46261.1 (hypothetical protein Csa_6G078560 [Cucumis sativus])

HSP 1 Score: 115.5 bits (288), Expect = 5.6e-23
Identity = 54/54 (100.00%), Postives = 54/54 (100.00%), Query Frame = 0

Query: 1  MKIDERFQRWGIELIGEEEEAMEKWVERGRGVEKKTCVGKLAFGGFVDKTMDKT 55
          MKIDERFQRWGIELIGEEEEAMEKWVERGRGVEKKTCVGKLAFGGFVDKTMDKT
Sbjct: 1  MKIDERFQRWGIELIGEEEEAMEKWVERGRGVEKKTCVGKLAFGGFVDKTMDKT 54

BLAST of CsaV3_6G006370 vs. TrEMBL
Match: tr|A0A0A0KEQ7|A0A0A0KEQ7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G078560 PE=4 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 3.7e-23
Identity = 54/54 (100.00%), Postives = 54/54 (100.00%), Query Frame = 0

Query: 1  MKIDERFQRWGIELIGEEEEAMEKWVERGRGVEKKTCVGKLAFGGFVDKTMDKT 55
          MKIDERFQRWGIELIGEEEEAMEKWVERGRGVEKKTCVGKLAFGGFVDKTMDKT
Sbjct: 1  MKIDERFQRWGIELIGEEEEAMEKWVERGRGVEKKTCVGKLAFGGFVDKTMDKT 54

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KGN46261.15.6e-23100.00hypothetical protein Csa_6G078560 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A0A0KEQ7|A0A0A0KEQ7_CUCSA3.7e-23100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G078560 PE=4 SV=1[more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_6G006370.1CsaV3_6G006370.1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_6G006370Cucumber (Chinese Long) v3cuccucB137
CsaV3_6G006370Silver-seed gourdcarcucB0263
CsaV3_6G006370Silver-seed gourdcarcucB0654
CsaV3_6G006370Silver-seed gourdcarcucB1129
CsaV3_6G006370Silver-seed gourdcarcucB1004
CsaV3_6G006370Silver-seed gourdcarcucB1128
CsaV3_6G006370Cucumber (Gy14) v2cgybcucB142
CsaV3_6G006370Cucumber (Gy14) v2cgybcucB298
CsaV3_6G006370Cucumber (Gy14) v1cgycucB398
CsaV3_6G006370Cucumber (Gy14) v1cgycucB556
CsaV3_6G006370Cucurbita maxima (Rimu)cmacucB0313
CsaV3_6G006370Cucurbita maxima (Rimu)cmacucB0441
CsaV3_6G006370Cucurbita maxima (Rimu)cmacucB0996
CsaV3_6G006370Cucurbita maxima (Rimu)cmacucB1065
CsaV3_6G006370Cucurbita maxima (Rimu)cmacucB1075
CsaV3_6G006370Cucurbita moschata (Rifu)cmocucB0308
CsaV3_6G006370Cucurbita moschata (Rifu)cmocucB0434
CsaV3_6G006370Cucurbita moschata (Rifu)cmocucB0980
CsaV3_6G006370Cucurbita moschata (Rifu)cmocucB1047
CsaV3_6G006370Cucurbita moschata (Rifu)cmocucB1057
CsaV3_6G006370Cucurbita pepo (Zucchini)cpecucB0167
CsaV3_6G006370Cucurbita pepo (Zucchini)cpecucB0396
CsaV3_6G006370Cucurbita pepo (Zucchini)cpecucB0405
CsaV3_6G006370Cucurbita pepo (Zucchini)cpecucB0785
CsaV3_6G006370Cucurbita pepo (Zucchini)cpecucB1077
CsaV3_6G006370Wild cucumber (PI 183967)cpicucB178
CsaV3_6G006370Wild cucumber (PI 183967)cpicucB364
CsaV3_6G006370Bottle gourd (USVL1VR-Ls)cuclsiB424
CsaV3_6G006370Bottle gourd (USVL1VR-Ls)cuclsiB491
CsaV3_6G006370Melon (DHL92) v3.5.1cucmeB444
CsaV3_6G006370Melon (DHL92) v3.5.1cucmeB506
CsaV3_6G006370Melon (DHL92) v3.6.1cucmedB435
CsaV3_6G006370Melon (DHL92) v3.6.1cucmedB493
CsaV3_6G006370Watermelon (Charleston Gray)cucwcgB490
CsaV3_6G006370Watermelon (Charleston Gray)cucwcgB497
CsaV3_6G006370Watermelon (97103) v1cucwmB517
CsaV3_6G006370Watermelon (97103) v1cucwmB562
CsaV3_6G006370Watermelon (97103) v2cucwmbB478
CsaV3_6G006370Watermelon (97103) v2cucwmbB487
CsaV3_6G006370Wax gourdcucwgoB561