CsaV3_6G004630 (gene) Cucumber (Chinese Long) v3

NameCsaV3_6G004630
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr6 : 3944561 .. 3944812 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGTGTTGGGGGCAAATGTTTGCCTTCCATGTAGTGCATGTGGGTGGTCTTATGCATAAGTCACATCCCTCTTTGAAATGTTGTTGTTACCAAGTTATTGTAGCTTATTTTAATTTGTTTGAAATCTTTGTGGGTTGCTTGGGTGATGAGGCATATAGTCTGCAAGATAGAAGTGTTCGGGCGGTTAAAGATTCTAAGTCTTCATCTTTGGTGTTAGAAGTCTATCATTTGTGTTTAGGGATAGTTTGA

mRNA sequence

ATGGTGTGTTGGGGGCAAATGTTTGCCTTCCATGTAGTGCATGTGGGTGGTCTTATGCATAAGTCACATCCCTCTTTGAAATGTTGTTGTTACCAAGTTATTGTAGCTTATTTTAATTTGTTTGAAATCTTTGTGGGTTGCTTGGGTGATGAGGCATATAGTCTGCAAGATAGAAGTGTTCGGGCGGTTAAAGATTCTAAGTCTTCATCTTTGGTGTTAGAAGTCTATCATTTGTGTTTAGGGATAGTTTGA

Coding sequence (CDS)

ATGGTGTGTTGGGGGCAAATGTTTGCCTTCCATGTAGTGCATGTGGGTGGTCTTATGCATAAGTCACATCCCTCTTTGAAATGTTGTTGTTACCAAGTTATTGTAGCTTATTTTAATTTGTTTGAAATCTTTGTGGGTTGCTTGGGTGATGAGGCATATAGTCTGCAAGATAGAAGTGTTCGGGCGGTTAAAGATTCTAAGTCTTCATCTTTGGTGTTAGAAGTCTATCATTTGTGTTTAGGGATAGTTTGA

Protein sequence

MVCWGQMFAFHVVHVGGLMHKSHPSLKCCCYQVIVAYFNLFEIFVGCLGDEAYSLQDRSVRAVKDSKSSSLVLEVYHLCLGIV
BLAST of CsaV3_6G004630 vs. NCBI nr
Match: KGN57707.1 (hypothetical protein Csa_3G257850 [Cucumis sativus])

HSP 1 Score: 177.6 bits (449), Expect = 1.8e-41
Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0

Query: 1  MVCWGQMFAFHVVHVGGLMHKSHPSLKCCCYQVIVAYFNLFEIFVGCLGDEAYSLQDRSV 60
          MVCWGQMFAFHVVHVGGLMHKSHPSLKCCCYQVIVAYFNLFEIFVGCLGDEAYSLQDRSV
Sbjct: 1  MVCWGQMFAFHVVHVGGLMHKSHPSLKCCCYQVIVAYFNLFEIFVGCLGDEAYSLQDRSV 60

Query: 61 RAVKDSKSSSLVLEVYHLCLGIV 84
          RAVKDSKSSSLVLEVYHLCLGIV
Sbjct: 61 RAVKDSKSSSLVLEVYHLCLGIV 83

BLAST of CsaV3_6G004630 vs. TrEMBL
Match: tr|A0A0A0LAL3|A0A0A0LAL3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G257850 PE=4 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 1.2e-41
Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0

Query: 1  MVCWGQMFAFHVVHVGGLMHKSHPSLKCCCYQVIVAYFNLFEIFVGCLGDEAYSLQDRSV 60
          MVCWGQMFAFHVVHVGGLMHKSHPSLKCCCYQVIVAYFNLFEIFVGCLGDEAYSLQDRSV
Sbjct: 1  MVCWGQMFAFHVVHVGGLMHKSHPSLKCCCYQVIVAYFNLFEIFVGCLGDEAYSLQDRSV 60

Query: 61 RAVKDSKSSSLVLEVYHLCLGIV 84
          RAVKDSKSSSLVLEVYHLCLGIV
Sbjct: 61 RAVKDSKSSSLVLEVYHLCLGIV 83

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KGN57707.11.8e-41100.00hypothetical protein Csa_3G257850 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A0A0LAL3|A0A0A0LAL3_CUCSA1.2e-41100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G257850 PE=4 SV=1[more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_6G004630.1CsaV3_6G004630.1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None