CsaV3_6G004260 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.TAGAATATCATATTAAATGAAATAAAATTGTCATCTAAAAATTGATTAACAAAAAAGTTGAAGATGGCATGTTATATAAAGAGAAGAGAGACCCTAAAGTCATTTATCCATTAATTTTGGAGAATAAGAAAGAAAGAAAGGAAAGAGAATAAAAGAATCAAAAGAAAAAGGACAAAGAAGAAAGGAGCGTGGGGTGTCCACTTCACCCAATTTCCTTTATTAATTTGATTCTCTCTTCCATTTTTCCCTCAACAGAATAACCTTTCGTTACAAGCAACCTCCGCTGCCGCAAAACCCCTTCCTTCCCCCCCACCTCGTTTCATCTATCCCACTACTTCTCTTACTTTAGCTTCCCAATATTCATTGCATTATTCCATTCATTTTCCTCTTTGCTGCGTTTCTTGAAGATTTCTTCTTCTTCCTCTTCTTCCTCTGCTTCTTCTTCTTCTTTGTTGCTTTATGTAGTTTAATCCACTTTCCTTATTCGTACGCATTTTCATTTCTTCTTCACCTAACGCTTCTTTTTTAATCACCCGAAATTGTTCCTTCAATGGGGAATAATTGCTATGGGAGTTCCAATAAATCGGCGGCGGAGATTGTGCCTCAGGAGTTATTCAGAAGCTGCAACAACGATTCCGTCACCGCGGCTTCTAATCCGACGGTACGCCTTTACGGCCCTCCGAATAATGCTTTCACCTGCTACATTCGTTTCGCTTTGCTATACAAGTCTGTGAAACTCAGTTTCATCCCTTCTGATGCCCCGCATTTCGGCTCCGATTCGCCGGCTATTCGGATCGGGTCAGAGACCATATCTGGTTCACGTGAAAGGATGCTTCGGTTTATAGACAATAAGTTTCCTCATCCGCCGTTACCACTATCGAGTCGCCGTGTTGACGAAGACGAAACGTCGTCGTTGGTTGCTGTGAGGGTGGTGGCGCTGCAGCACAAGAGTGTGTTGTGGCATTTGGAGAGGATGTTGAGATGGGGAAAGGACCTGGCTAATCGTGGAGGGAGAACGACGTTCGATCCGGCGGTGGGAACTCCGAGGATGGAGCTGAGGAAGTTCGGGAAGAGCTACTCTCAGCTGCTGGAAGTGATGCTGGAGCATGCTCAAATGGAGGAGAGAGTCCTCTTTCCGATCTTGGACAGGGCTGATCGAGGTAAGTCCCATCTCTCTGCTTCTGCTCTGCTTTACATTGAATAGAATTCGAGCTTATGTTTATGCAATCCAAACCCTAAATATTTTTGCATCATGAAAGAAAATACATGGAAGAAGAAGTGTTTGTGATTCTTAGTTTACATCAGATTTAGTTCAATTTTAAAAGTCGTTATTGATTCTAGGAAAGGTTGTTTTAGATCTATCAAATTAGCGCAGAAGATTGAGATGATCAGTAAGAAACAGTAATGAACTTCAATAACTTTCTTGGTTATCCAATCTTTTCAATTCAGGGTGAAATAAAGAGGTTGGTTGGCTTATTTTGAGTACTAACAAGTGGGGTATTTTGAATTTGAACGTTTGATCAAAGAGTACTGCTGAACTCACCCACTTTGACATTTGGCTTCTTTTACTTAATTTTATCGAGTTTTGCAACTATTCACATGTTTAAAGGAAAAACTATTTTCAGTTATTTAAAAAACAAATCACATGAGAGGAAGCTAAGAACAGCAACTAGAAGACAACCTGTACTCCGAAACTAAAAAAGAAAAAGAAAAAAGACAACCCATGTAAATGATGTATGTTTCTAAATTTTCGATTTACATTTTATTTTGTTCCATTGATTTCTATATCTATCTTGTTTTAGTGATCAAAATTTCAAACGTATTATTTTACTCTTTTATTTACTTTTTTCTTTCTGAAATGTAGTGAATTTTTTTTAATGTATTGTTTTAGAGCATAAACTAAACAAATGATATATTTAACCGGAATTTTCATTTAATATATAGCATTTAATCATAAAGTATTTTATAATATAAAATTCAGGAATTAAATTATTTTAAAACAAAAATAGAATAAATAGGGTATCTTAAATATCAACTGAATTGAGCTTTTTTCTTTTTCTGATGGTCCTTTCATTGTTTTGGAAGTATTTCACCTGTTTTTTTAGACAGTATTTAATGTGTCTAGAAAAGATGCAGAAAATTACAACTCAAGGTTAATTTGTTTTCTTTTCACATGAAAAAGGTGGGAATGCAAACCTATTGCCCCTGTGAAAATAAAAAGTGCATTACCTACTAAACTATGCTCGCATAGACAAATTTGGTGAATTCTAAACAAATATACTAGTGATGGTTTTTTCTGCTATGGGATTTTGGGATTTATTCAAACAGAGCCCGTGTTATATATACAATATATATATATACGTATTAGTACATTACATATATGAGGAAAGATGAAGGAACTAATTGGTAGGTGCCATAATGCAGGATTATGTAAAGCTTCAAATGAGGAGCATGCAAGGGATCTACCCATCATGAATGGCATCAAAGAAGACATCAAGTCCGCTGTCGTTTTGGACTTGGGAAGTTCAGTTTGTCAAGAAGCGCTCTCCAACCTTTCCAAACGTCTTAAGCTGTTGCAGGTAACTCCATTCAACCCTTCTTTAATCCTAACCTGTTCATAATTCATAGGGTTTAAGACCTTATGCTTAAGATTCCAAATAAAATGCATTGAGTCTTAACCACAGAGCAGATTCAAAAGGAAGAGGATGGATGAGTGATGGATTGTCAAATCATAACAATGTGATCTGTTTTTCTTCGTTGGGTATGGGAAGAAACCAAAGGCCTTTGACTACAGATCCAATAGAAGTAGAACAACTGTAAAGATAAAAAGAATTAACTGTCAATTTTTTATATAAAAAACCTTGAACAAACAACTCAAAAGAATTGATTGACGTGAATCTAAGCATAGGTTAACTGGTTAAGATAACCATCGACGAAGAGGACAAAAGTTCAGAATTTCCTGTCCGCAAGAAAGTTAGTGATTCGTACTTGTTTTCTATTATTAATTTCCAAATTCTAGTTCCGCTCTCTCTCAAAAAAAAAAAAAAATCCAAATTGTAGTTGCTTCAGGATTGTCGTTTAAGACTTAAATTTCTTCACGCACATTGATATCTTCGTCAGAAACATTTATTTACTCTGGCCGTCATTTAGGTCGACCCTACTTAGTTAGACTGAAACGAAGAACACTCATCATCGTGACTTTATGGAAGTAGATAGGGGTAAAGTAGGAAATAAAGATAGCTATCTAAACCATGTGGACTAAAGGAGGCATCAAATAACACTCTGCCACACGAAGCCTTGTGACCACACTATAAGATTAGCTGTTAGCATAACCCTTTTTGGCTGAGGTTATTAAATTCTGGCTAATGGATCTACATTACTTTATGTCATTGTGGAGAATGTATTAAGTTTACCACATTTATACAAGTCAAGCTTTTGAACATAATGATGATTTAGTAGACTTTCAATAGCCAAACCACTTCTAAGTTCTACTTCAAAATTTAACTACTTATGATCATGAAATTCATTTATATCTGCTTCACACTTCACACGTATTTTCTTTATTGCACTCCAAGATTTCCTGCTCATCATAAGCTGATTTCTTTTTCCTTACCCTTTTCTTTTTTCCCTTCACATTTTTTGGGTGGGGGCAGGAACATTGTAAACATCACTTTTTGGATGAAGAGAAAAATCTACTACCTTGGCTTGAAGCTGTAGAGCTGAGCAAAGAGCAGCAAGACAAAATGTTAGAGCAGCTATTGGATTTGATGAAACAAACTCATTCTCATTTACTAAATTTCTTTCTTGAAGGTCTTCTCCCTCTAGAAGCTCTGCAGTATTTGGATCTGATCACGAGCAGTAGTGATAGAATCCGAACGAGCTTTGGCACAATGCTGATGATGGATGCTGTGTAAGATCAAACATGTATATAGATTCTCTTTTTTACTCCCATCTAGATTGGATTTGCAGCATCCTTTGTGTTAATAGGTTAGAATGAATGCCTGTTCTTTCTTTGGCATCTTGTGTTTTAGTTTGGAGATGAAGTATAGTAATTTGTTTTCATATTTTTTAGCGCAGTGTGTGGCATAAAAATGAAAAAAAAGAGGGAAAAAATGATTGTAGATCGAGATTTTCTCTTTTAGTTCAACAAGTGGGACTTCAACAGATTTCAAACTTTAACTTCTTGATTGGAGGCATATGACTTAAGCGATTGAATTAGTTGTTTGAGGCTTGTAATTGGACTACTGTTGTTTTGGTCACACAATCAGTTTATATAGTATAGTCCATATAGCACTAGTGAAATGAAATTGGGTAAAGTTGCATTGCAATTCCCATGATTTTTATTTGTACTTTTTCAAGGTTAAGATCCAATTTGTTTGATGTAGTTGATAAATTTAGAGGTCAAATTTGAATTTATTTTGTGAAGTAGATTTAAATTAGGTTAAATGATTCTTAAACTTTTGTTGAAGCAACATTTCAGTACTTTAGTTTCTCTACTAAACTATATCAAATTTAATCCTTCATTTTTG ATGGGGAATAATTGCTATGGGAGTTCCAATAAATCGGCGGCGGAGATTGTGCCTCAGGAGTTATTCAGAAGCTGCAACAACGATTCCGTCACCGCGGCTTCTAATCCGACGGTACGCCTTTACGGCCCTCCGAATAATGCTTTCACCTGCTACATTCGTTTCGCTTTGCTATACAAGTCTGTGAAACTCAGTTTCATCCCTTCTGATGCCCCGCATTTCGGCTCCGATTCGCCGGCTATTCGGATCGGGTCAGAGACCATATCTGGTTCACGTGAAAGGATGCTTCGGTTTATAGACAATAAGTTTCCTCATCCGCCGTTACCACTATCGAGTCGCCGTGTTGACGAAGACGAAACGTCGTCGTTGGTTGCTGTGAGGGTGGTGGCGCTGCAGCACAAGAGTGTGTTGTGGCATTTGGAGAGGATGTTGAGATGGGGAAAGGACCTGGCTAATCGTGGAGGGAGAACGACGTTCGATCCGGCGGTGGGAACTCCGAGGATGGAGCTGAGGAAGTTCGGGAAGAGCTACTCTCAGCTGCTGGAAGTGATGCTGGAGCATGCTCAAATGGAGGAGAGAGTCCTCTTTCCGATCTTGGACAGGGCTGATCGAGGATTATGTAAAGCTTCAAATGAGGAGCATGCAAGGGATCTACCCATCATGAATGGCATCAAAGAAGACATCAAGTCCGCTGTCGTTTTGGACTTGGGAAGTTCAGTTTGTCAAGAAGCGCTCTCCAACCTTTCCAAACGTCTTAAGCTGTTGCAGGAACATTGTAAACATCACTTTTTGGATGAAGAGAAAAATCTACTACCTTGGCTTGAAGCTGTAGAGCTGAGCAAAGAGCAGCAAGACAAAATGTTAGAGCAGCTATTGGATTTGATGAAACAAACTCATTCTCATTTACTAAATTTCTTTCTTGAAGGTCTTCTCCCTCTAGAAGCTCTGCAGTATTTGGATCTGATCACGAGCAGTAGTGATAGAATCCGAACGAGCTTTGGCACAATGCTGATGATGGATGCTGTGTAA ATGGGGAATAATTGCTATGGGAGTTCCAATAAATCGGCGGCGGAGATTGTGCCTCAGGAGTTATTCAGAAGCTGCAACAACGATTCCGTCACCGCGGCTTCTAATCCGACGGTACGCCTTTACGGCCCTCCGAATAATGCTTTCACCTGCTACATTCGTTTCGCTTTGCTATACAAGTCTGTGAAACTCAGTTTCATCCCTTCTGATGCCCCGCATTTCGGCTCCGATTCGCCGGCTATTCGGATCGGGTCAGAGACCATATCTGGTTCACGTGAAAGGATGCTTCGGTTTATAGACAATAAGTTTCCTCATCCGCCGTTACCACTATCGAGTCGCCGTGTTGACGAAGACGAAACGTCGTCGTTGGTTGCTGTGAGGGTGGTGGCGCTGCAGCACAAGAGTGTGTTGTGGCATTTGGAGAGGATGTTGAGATGGGGAAAGGACCTGGCTAATCGTGGAGGGAGAACGACGTTCGATCCGGCGGTGGGAACTCCGAGGATGGAGCTGAGGAAGTTCGGGAAGAGCTACTCTCAGCTGCTGGAAGTGATGCTGGAGCATGCTCAAATGGAGGAGAGAGTCCTCTTTCCGATCTTGGACAGGGCTGATCGAGGATTATGTAAAGCTTCAAATGAGGAGCATGCAAGGGATCTACCCATCATGAATGGCATCAAAGAAGACATCAAGTCCGCTGTCGTTTTGGACTTGGGAAGTTCAGTTTGTCAAGAAGCGCTCTCCAACCTTTCCAAACGTCTTAAGCTGTTGCAGGAACATTGTAAACATCACTTTTTGGATGAAGAGAAAAATCTACTACCTTGGCTTGAAGCTGTAGAGCTGAGCAAAGAGCAGCAAGACAAAATGTTAGAGCAGCTATTGGATTTGATGAAACAAACTCATTCTCATTTACTAAATTTCTTTCTTGAAGGTCTTCTCCCTCTAGAAGCTCTGCAGTATTTGGATCTGATCACGAGCAGTAGTGATAGAATCCGAACGAGCTTTGGCACAATGCTGATGATGGATGCTGTGTAA MGNNCYGSSNKSAAEIVPQELFRSCNNDSVTAASNPTVRLYGPPNNAFTCYIRFALLYKSVKLSFIPSDAPHFGSDSPAIRIGSETISGSRERMLRFIDNKFPHPPLPLSSRRVDEDETSSLVAVRVVALQHKSVLWHLERMLRWGKDLANRGGRTTFDPAVGTPRMELRKFGKSYSQLLEVMLEHAQMEERVLFPILDRADRGLCKASNEEHARDLPIMNGIKEDIKSAVVLDLGSSVCQEALSNLSKRLKLLQEHCKHHFLDEEKNLLPWLEAVELSKEQQDKMLEQLLDLMKQTHSHLLNFFLEGLLPLEALQYLDLITSSSDRIRTSFGTMLMMDAV
BLAST of CsaV3_6G004260 vs. NCBI nr
Match: XP_004140904.2 (PREDICTED: uncharacterized protein LOC101208874 [Cucumis sativus] >KGN46040.1 hypothetical protein Csa_6G045190 [Cucumis sativus]) HSP 1 Score: 678.3 bits (1749), Expect = 1.3e-191 Identity = 341/341 (100.00%), Postives = 341/341 (100.00%), Query Frame = 0
BLAST of CsaV3_6G004260 vs. NCBI nr
Match: XP_008456602.1 (PREDICTED: uncharacterized protein LOC103496512 [Cucumis melo]) HSP 1 Score: 661.4 bits (1705), Expect = 1.7e-186 Identity = 330/341 (96.77%), Postives = 336/341 (98.53%), Query Frame = 0
BLAST of CsaV3_6G004260 vs. NCBI nr
Match: XP_022956168.1 (uncharacterized protein LOC111457939 [Cucurbita moschata]) HSP 1 Score: 578.9 bits (1491), Expect = 1.1e-161 Identity = 286/339 (84.37%), Postives = 310/339 (91.45%), Query Frame = 0
BLAST of CsaV3_6G004260 vs. NCBI nr
Match: XP_023525990.1 (uncharacterized protein LOC111789551 isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 578.2 bits (1489), Expect = 1.9e-161 Identity = 285/339 (84.07%), Postives = 310/339 (91.45%), Query Frame = 0
BLAST of CsaV3_6G004260 vs. NCBI nr
Match: XP_022990403.1 (uncharacterized protein LOC111487271 [Cucurbita maxima]) HSP 1 Score: 574.3 bits (1479), Expect = 2.7e-160 Identity = 284/339 (83.78%), Postives = 308/339 (90.86%), Query Frame = 0
BLAST of CsaV3_6G004260 vs. TAIR10
Match: AT3G54290.1 (FUNCTIONS IN: molecular_function unknown) HSP 1 Score: 343.2 bits (879), Expect = 1.8e-94 Identity = 173/340 (50.88%), Postives = 237/340 (69.71%), Query Frame = 0
BLAST of CsaV3_6G004260 vs. TrEMBL
Match: tr|A0A0A0K8J3|A0A0A0K8J3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G045190 PE=4 SV=1) HSP 1 Score: 678.3 bits (1749), Expect = 8.8e-192 Identity = 341/341 (100.00%), Postives = 341/341 (100.00%), Query Frame = 0
BLAST of CsaV3_6G004260 vs. TrEMBL
Match: tr|A0A1S3C379|A0A1S3C379_CUCME (uncharacterized protein LOC103496512 OS=Cucumis melo OX=3656 GN=LOC103496512 PE=4 SV=1) HSP 1 Score: 661.4 bits (1705), Expect = 1.1e-186 Identity = 330/341 (96.77%), Postives = 336/341 (98.53%), Query Frame = 0
BLAST of CsaV3_6G004260 vs. TrEMBL
Match: tr|A0A2N9FWA8|A0A2N9FWA8_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS19171 PE=4 SV=1) HSP 1 Score: 400.6 bits (1028), Expect = 3.6e-108 Identity = 212/342 (61.99%), Postives = 259/342 (75.73%), Query Frame = 0
BLAST of CsaV3_6G004260 vs. TrEMBL
Match: tr|A0A061FWR7|A0A061FWR7_THECC (Uncharacterized protein isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_044208 PE=4 SV=1) HSP 1 Score: 388.3 bits (996), Expect = 1.8e-104 Identity = 199/337 (59.05%), Postives = 251/337 (74.48%), Query Frame = 0
BLAST of CsaV3_6G004260 vs. TrEMBL
Match: tr|A0A2I4E2S5|A0A2I4E2S5_9ROSI (uncharacterized protein LOC108985732 OS=Juglans regia OX=51240 GN=LOC108985732 PE=4 SV=1) HSP 1 Score: 384.0 bits (985), Expect = 3.4e-103 Identity = 194/323 (60.06%), Postives = 244/323 (75.54%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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