CsaV3_6G002920 (gene) Cucumber (Chinese Long) v3

NameCsaV3_6G002920
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr6 : 2139440 .. 2139706 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCGACACACCAAAGAATTGGCGAAGGATGCACAATGTGTCGACAAAACGATTGCCGATGCAAGTCAAAACGTCGATAACAACGTCAAGAAAAACCGTTAGTGAAACATTGACCGATGTGGTGATGGCCCACGTCAGCGAAACCTTATCTCCGAGGCAAAAAAATTCAACACATAGAGGATGTCGGTTACTAGCTAAACTCGATGTGACTACAATACGTCCAAATACCAAAGTCAAACATTGTGTCGACACAAGGTTTCTTTGA

mRNA sequence

ATGGCCGACACACCAAAGAATTGGCGAAGGATGCACAATGTGTCGACAAAACGATTGCCGATGCAAGTCAAAACGTCGATAACAACGTCAAGAAAAACCGTTAGTGAAACATTGACCGATGTGGTGATGGCCCACGTCAGCGAAACCTTATCTCCGAGGCAAAAAAATTCAACACATAGAGGATGTCGGTTACTAGCTAAACTCGATGTGACTACAATACGTCCAAATACCAAAGTCAAACATTGTGTCGACACAAGGTTTCTTTGA

Coding sequence (CDS)

ATGGCCGACACACCAAAGAATTGGCGAAGGATGCACAATGTGTCGACAAAACGATTGCCGATGCAAGTCAAAACGTCGATAACAACGTCAAGAAAAACCGTTAGTGAAACATTGACCGATGTGGTGATGGCCCACGTCAGCGAAACCTTATCTCCGAGGCAAAAAAATTCAACACATAGAGGATGTCGGTTACTAGCTAAACTCGATGTGACTACAATACGTCCAAATACCAAAGTCAAACATTGTGTCGACACAAGGTTTCTTTGA

Protein sequence

MADTPKNWRRMHNVSTKRLPMQVKTSITTSRKTVSETLTDVVMAHVSETLSPRQKNSTHRGCRLLAKLDVTTIRPNTKVKHCVDTRFL
BLAST of CsaV3_6G002920 vs. NCBI nr
Match: KGN45901.1 (hypothetical protein Csa_6G020150 [Cucumis sativus])

HSP 1 Score: 177.2 bits (448), Expect = 2.5e-41
Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 0

Query: 1  MADTPKNWRRMHNVSTKRLPMQVKTSITTSRKTVSETLTDVVMAHVSETLSPRQKNSTHR 60
          MADTPKNWRRMHNVSTKRLPMQVKTSITTSRKTVSETLTDVVMAHVSETLSPRQKNSTHR
Sbjct: 1  MADTPKNWRRMHNVSTKRLPMQVKTSITTSRKTVSETLTDVVMAHVSETLSPRQKNSTHR 60

Query: 61 GCRLLAKLDVTTIRPNTKVKHCVDTRFL 89
          GCRLLAKLDVTTIRPNTKVKHCVDTRFL
Sbjct: 61 GCRLLAKLDVTTIRPNTKVKHCVDTRFL 88

BLAST of CsaV3_6G002920 vs. TrEMBL
Match: tr|A0A0A0KDP4|A0A0A0KDP4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G020150 PE=4 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 1.7e-41
Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 0

Query: 1  MADTPKNWRRMHNVSTKRLPMQVKTSITTSRKTVSETLTDVVMAHVSETLSPRQKNSTHR 60
          MADTPKNWRRMHNVSTKRLPMQVKTSITTSRKTVSETLTDVVMAHVSETLSPRQKNSTHR
Sbjct: 1  MADTPKNWRRMHNVSTKRLPMQVKTSITTSRKTVSETLTDVVMAHVSETLSPRQKNSTHR 60

Query: 61 GCRLLAKLDVTTIRPNTKVKHCVDTRFL 89
          GCRLLAKLDVTTIRPNTKVKHCVDTRFL
Sbjct: 61 GCRLLAKLDVTTIRPNTKVKHCVDTRFL 88

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KGN45901.12.5e-41100.00hypothetical protein Csa_6G020150 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A0A0KDP4|A0A0A0KDP4_CUCSA1.7e-41100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G020150 PE=4 SV=1[more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_6G002920.1CsaV3_6G002920.1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None