CsaV3_6G001900 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_6G001900
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	transcription factor bHLH51
Location	chr6 : 1303975 .. 1307218 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTGAGTTCTTTGTTTCAATTTTTTTTTTCTTGGCTAAAAAATAATCATACAAATTTGATGGGTAATGGATTTAAAAGAGGACAATCTTTAATTGATGAGATCGTGGAGTCTTAGCTTTATCAAAGAGGGGGAAAACAGAAACTTCAAACTGAAATGACAGGCATATACAGCCAAATATGATTTTCGTTTTGACAAATTAAAGGCTATTGGACATCACACCAATCACCATCAAGATTTGAATATCACACACACACACACACACACACAACAACACCATCATCAACAACAACACATTATTATTAGTGCAATCAACAGTATCTCTCCAGATGCAACCATAAAAACCAAACTTTTGGGTTTGATTTCACAAGACTGGCCCCTGCCTCCTCTTTTGCATCAGTAATGGAAGATAGCAACTGGGATCGTTCTACTAAGCCTGAGGGGCTAAATTTTGATCACTGCAATCCCAATTCAAGCCAGGAAGCTTCTCTTCTTCTTCCATGGATGATCAATCCTCAGTTTTCAAGCTCAAATGAGTTCTTCCCTTCATTTTCAACTCCATCAGAAGGAATTATTGTTGAAGATAGAGCAGCTTCTGCTTCAAAAAGCCATAGCCAAGCAGAAAAGAGACGTAGAGACAGAATCAATGCTCAGCTTGCAACTCTTAGGAAACTCATTCCCAAATCTGATAAGGTACTCTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGCTAGCCTTGTCTCTTTCTAATTGGGATGGACCTGAGACACTGAAACATAGCAAAACGTATCTACTTTTTCATTCTCCTAGTAGATTACAGATCCCATGTCAACAGATAGAGATTATTAGAGTAATCAGCATAGAGCAATACAAGTTTATGAACTTTAGTGAAAGAGGACTTATAAAATTGCATAGTTGTTACTCTGTGAAGAAGCATATACCATCAAAGAGAAACTCTGCAGCACATGCTTAGATCCATCTTCTTGTTTCCTATGGCAGATGGATAAAGCAGCTTTGTTGGGAAGCGCAATCGATCAAGTGAAAGATCTGAAACGAAAAGCAATGGAAGCCAGCAAGAACATGACAGTTCCAACAGACATGGATGAAGTAACTATTGACTCCACTGTGGTTGAAGACAATAGCAGGAATAACATTGCGATAAAGGTATCGGTTAGTTGTGACGATCGGCCAGAACTGTTCACAGAGCTCATCCAAGTGATCAAAGGATTGAAGCTCACAACAATAAGAGCTGATATGGCCAGTGTTGGTGGTCGCATTAAAAGCATACTTATCCTTTGCAATAAAGATGGTGAAAAAAGTGTCTGCTTAAACACTGTTCAGCAGTCTCTTAAATTAGTTTTAAGTCGAATGTCATCGTCATCAACTGCCTCAACCTATCGTATTAGAAGTAAACGACAGAGGTTCTTCCTCCCTTCGCAATATTCAAAGTAGTTTCTCTTCAATTATTTAACCAAGAATAGAGTTATTGATTGAAAACCATGCTTCAATACAATCACAATGGATTGAACGAATGATACAAGGCAAAAGCTGAAGCTAAAGCCAACAACTGTTTCTAATTAGAACGAGAGAGTTTTGCTGTTGAGATTCCAAGTTGGAAAACAAAACTAGATAGGTAAAATCCATCAAAAGATTCGTTAAAGTGTAGTATTGGAAAGACGGACGAGTCAAAGAACACCAATATGTCTCATTATGTTAGTTTTCCCTTGACACAACATATAGCAACTTTTCATGAAGTATTAAGATCATGGCGTACTTAAACAGCCTTGCATTGACCGAAGAGGTGTAACATAAATGATTAGTAAAGAAAAAAATTCATAGTATTCAATTCTTAGCTAATTCGTTCTTATATTTTAAACAGTGCCGATTATACCACATTGAAGTTCATAATCAAACATGTTTCATTATCACCATTGAGGCCAAACTTGAAATGAACTAATAGGCCATCGCTAGATATCGTCTGATAACAAGAAAAAGTTCATGCATACTAAGCATTATCTCACATTCCTTTGTCTACAAACTAACAAGAACAAAATTATCCTTCAAATAAATGACAGGGAACAAAAGAATCTATCATGGAGGCAAAAAGAAATGGCGTTCGTAATCATCAATTGAATATAGAAATCAATATATAATAGGCTTTTGATCATCAATTGATCACATAAAGAACTAGTGTTTCGGAAGAGTACTATCAAATTTCCCAGCCCTTTTCTTAGACCAACGCACAAATTGGTAATTGAGTAGGATCAAAAAATAGTTTCGAATCCAATTCGGACAACTACATGCGATAGATGAAAACCTCCTTGTAAACCTTGTAGATTCATTCCTTAAATGAACATGAGCTTTGTTCTTCGCATTTCTATTTCTAGCATTATTTACTGTGATGCATTTAGCAACTATAAAACACTCCCCTCATTTATAATTGTATAACTAAACCCAGAAAATTAAAGTAAGGCAGAACATTACGTAAGTTCAAAACATCAGAAATAAGTTCGAGTGAACGAGCTCATAAGGAAGCAAATACCAAAATCAAAATGGATCTAAGAAAAATTCTTCAAACTTCACTAATACTTGGTTGGACCGACTGTAACTTTATAAGTAATCATCAATGTAGGACTTTAAAAGTAATCATCAATATAGGCGTTTACATGCATATACCGATGGAATGTTAGAGATGGGTCAACAATATACTTGGACAATGAAGAAAAAAATATCAAGTTTTTAAGTTAATGGTGACAAACAACATATCATCAACTGATATTTCAGAAACTCCAGAAAGTGAATTCAATAATGTAGATCCCAGAGGGAAGTAAGTTCAACAAAATTGCTCATCGAAACTAAAAGAAATCGATAAAAATCCAACAAAAACACAAGAAAATGAACTATTACTCGTCCTAGATCAGTAGAAACTAAAGGAACGATTGTCTTTTTTATTTAAAGAAGACACAAACTACTTGGATCTCTGCCTCATCTTTCGGCGCTTCCTCTTCAATCTCCTCATTCTCTTCTTCTTCCACTGGTGAATCCAAAGTAAAAACAAAAACAAACCAACAATAAAAATCAACGGAAGAACGAAGCTATATGATTTTAAAAACTTTATTAGAAAACTTCCAAACGTACCTTAGCCCTCATGTTGAAGAACTGCTAACCGAATCACCAAAGAAGAACAATGGTGTGGCGAACGAGGCGAGTGACGAGATCGACGACGTTCAGGAAGGTAGGGCTTC

mRNA sequence

ATGGAAGATAGCAACTGGGATCGTTCTACTAAGCCTGAGGGGCTAAATTTTGATCACTGCAATCCCAATTCAAGCCAGGAAGCTTCTCTTCTTCTTCCATGGATGATCAATCCTCAGTTTTCAAGCTCAAATGAGTTCTTCCCTTCATTTTCAACTCCATCAGAAGGAATTATTGTTGAAGATAGAGCAGCTTCTGCTTCAAAAAGCCATAGCCAAGCAGAAAAGAGACGTAGAGACAGAATCAATGCTCAGCTTGCAACTCTTAGGAAACTCATTCCCAAATCTGATAAGATGGATAAAGCAGCTTTGTTGGGAAGCGCAATCGATCAAGTGAAAGATCTGAAACGAAAAGCAATGGAAGCCAGCAAGAACATGACAGTTCCAACAGACATGGATGAAGTAACTATTGACTCCACTGTGGTTGAAGACAATAGCAGGAATAACATTGCGATAAAGGTATCGGTTAGTTGTGACGATCGGCCAGAACTGTTCACAGAGCTCATCCAAGTGATCAAAGGATTGAAGCTCACAACAATAAGAGCTGATATGGCCAGTGTTGGTGGTCGCATTAAAAGCATACTTATCCTTTGCAATAAAGATGGTGAAAAAAGTGTCTGCTTAAACACTGTTCAGCAGTCTCTTAAATTAGTTTTAAGTCGAATGTCATCGTCATCAACTGCCTCAACCTATCGTATTAGAAGTAAACGACAGAGGTTCTTCCTCCCTTCGCAATATTCAAAGTAG

Coding sequence (CDS)

ATGGAAGATAGCAACTGGGATCGTTCTACTAAGCCTGAGGGGCTAAATTTTGATCACTGCAATCCCAATTCAAGCCAGGAAGCTTCTCTTCTTCTTCCATGGATGATCAATCCTCAGTTTTCAAGCTCAAATGAGTTCTTCCCTTCATTTTCAACTCCATCAGAAGGAATTATTGTTGAAGATAGAGCAGCTTCTGCTTCAAAAAGCCATAGCCAAGCAGAAAAGAGACGTAGAGACAGAATCAATGCTCAGCTTGCAACTCTTAGGAAACTCATTCCCAAATCTGATAAGATGGATAAAGCAGCTTTGTTGGGAAGCGCAATCGATCAAGTGAAAGATCTGAAACGAAAAGCAATGGAAGCCAGCAAGAACATGACAGTTCCAACAGACATGGATGAAGTAACTATTGACTCCACTGTGGTTGAAGACAATAGCAGGAATAACATTGCGATAAAGGTATCGGTTAGTTGTGACGATCGGCCAGAACTGTTCACAGAGCTCATCCAAGTGATCAAAGGATTGAAGCTCACAACAATAAGAGCTGATATGGCCAGTGTTGGTGGTCGCATTAAAAGCATACTTATCCTTTGCAATAAAGATGGTGAAAAAAGTGTCTGCTTAAACACTGTTCAGCAGTCTCTTAAATTAGTTTTAAGTCGAATGTCATCGTCATCAACTGCCTCAACCTATCGTATTAGAAGTAAACGACAGAGGTTCTTCCTCCCTTCGCAATATTCAAAGTAG

Protein sequence

MEDSNWDRSTKPEGLNFDHCNPNSSQEASLLLPWMINPQFSSSNEFFPSFSTPSEGIIVEDRAASASKSHSQAEKRRRDRINAQLATLRKLIPKSDKMDKAALLGSAIDQVKDLKRKAMEASKNMTVPTDMDEVTIDSTVVEDNSRNNIAIKVSVSCDDRPELFTELIQVIKGLKLTTIRADMASVGGRIKSILILCNKDGEKSVCLNTVQQSLKLVLSRMSSSSTASTYRIRSKRQRFFLPSQYSK

Homology

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BLAST of CsaV3_6G001900 vs. NCBI nr
Match: XP_004138418.2 (PREDICTED: transcription factor bHLH51 [Cucumis sativus] >KGN45796.1 hypothetical protein Csa_6G011720 [Cucumis sativus])

HSP 1 Score: 466.1 bits (1198), Expect = 7.6e-128
Identity = 247/247 (100.00%), Postives = 247/247 (100.00%), Query Frame = 0


Query: 1   MEDSNWDRSTKPEGLNFDHCNPNSSQEASLLLPWMINPQFSSSNEFFPSFSTPSEGIIVE 60
           MEDSNWDRSTKPEGLNFDHCNPNSSQEASLLLPWMINPQFSSSNEFFPSFSTPSEGIIVE
Sbjct: 1   MEDSNWDRSTKPEGLNFDHCNPNSSQEASLLLPWMINPQFSSSNEFFPSFSTPSEGIIVE 60

Query: 61  DRAASASKSHSQAEKRRRDRINAQLATLRKLIPKSDKMDKAALLGSAIDQVKDLKRKAME 120
           DRAASASKSHSQAEKRRRDRINAQLATLRKLIPKSDKMDKAALLGSAIDQVKDLKRKAME
Sbjct: 61  DRAASASKSHSQAEKRRRDRINAQLATLRKLIPKSDKMDKAALLGSAIDQVKDLKRKAME 120

Query: 121 ASKNMTVPTDMDEVTIDSTVVEDNSRNNIAIKVSVSCDDRPELFTELIQVIKGLKLTTIR 180
           ASKNMTVPTDMDEVTIDSTVVEDNSRNNIAIKVSVSCDDRPELFTELIQVIKGLKLTTIR
Sbjct: 121 ASKNMTVPTDMDEVTIDSTVVEDNSRNNIAIKVSVSCDDRPELFTELIQVIKGLKLTTIR 180

Query: 181 ADMASVGGRIKSILILCNKDGEKSVCLNTVQQSLKLVLSRMSSSSTASTYRIRSKRQRFF 240
           ADMASVGGRIKSILILCNKDGEKSVCLNTVQQSLKLVLSRMSSSSTASTYRIRSKRQRFF
Sbjct: 181 ADMASVGGRIKSILILCNKDGEKSVCLNTVQQSLKLVLSRMSSSSTASTYRIRSKRQRFF 240

Query: 241 LPSQYSK 248
           LPSQYSK
Sbjct: 241 LPSQYSK 247

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BLAST of CsaV3_6G001900 vs. NCBI nr
Match: XP_008441476.1 (PREDICTED: transcription factor bHLH51 [Cucumis melo])

HSP 1 Score: 451.1 bits (1159), Expect = 2.5e-123
Identity = 239/246 (97.15%), Postives = 242/246 (98.37%), Query Frame = 0


Query: 1   MEDSNWDRSTKPEGLNFDHCNPNSSQEASLLLPWMINPQFSSSNEFFPSFSTPSEGIIVE 60
           MED+NWDRSTKPEGLNFDHCNPNSS EASLL PWMINPQFSSSNEFFPSFS+PSEGIIVE
Sbjct: 1   MEDNNWDRSTKPEGLNFDHCNPNSSHEASLLHPWMINPQFSSSNEFFPSFSSPSEGIIVE 60

Query: 61  DRAASASKSHSQAEKRRRDRINAQLATLRKLIPKSDKMDKAALLGSAIDQVKDLKRKAME 120
           DRAASASKSHSQAEKRRRDRINAQLATLRKLIPKSDKMDKAALLGSAIDQVKDLKRKAME
Sbjct: 61  DRAASASKSHSQAEKRRRDRINAQLATLRKLIPKSDKMDKAALLGSAIDQVKDLKRKAME 120

Query: 121 ASKNMTVPTDMDEVTIDSTVVEDNSRNNIAIKVSVSCDDRPELFTELIQVIKGLKLTTIR 180
           ASKNMTVPTDMDEVTIDST+VEDNS NNIAIKVSVSCDDRPEL TELIQVIKGLKLTTIR
Sbjct: 121 ASKNMTVPTDMDEVTIDSTMVEDNSSNNIAIKVSVSCDDRPELLTELIQVIKGLKLTTIR 180

Query: 181 ADMASVGGRIKSILILCNKDGEKSVCLNTVQQSLKLVLSRMSSSSTASTYRIRSKRQRFF 240
           ADMASVGGRIKSILILCNKDGEKSVCLNTVQQSLKLVLSRMSSSSTASTYRIRSKRQRFF
Sbjct: 181 ADMASVGGRIKSILILCNKDGEKSVCLNTVQQSLKLVLSRMSSSSTASTYRIRSKRQRFF 240

Query: 241 LPSQYS 247
           LPSQYS
Sbjct: 241 LPSQYS 246

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BLAST of CsaV3_6G001900 vs. NCBI nr
Match: XP_022134346.1 (transcription factor bHLH51-like [Momordica charantia])

HSP 1 Score: 396.4 bits (1017), Expect = 7.4e-107
Identity = 218/251 (86.85%), Postives = 229/251 (91.24%), Query Frame = 0


Query: 3   DSNWDRSTKPEGLNFDHCNPNSSQE-ASLLLPWMINPQFSSSNEF----FPSFSTPSEGI 62
           + NWD STKPEGLN+ HCN NSS+E  SLLLPWMINPQ SSS E     FPSFSTPSEGI
Sbjct: 2   EENWDCSTKPEGLNWAHCNSNSSREPPSLLLPWMINPQLSSSTELQFDGFPSFSTPSEGI 61

Query: 63  IVEDRAASASKSHSQAEKRRRDRINAQLATLRKLIPKSDKMDKAALLGSAIDQVKDLKRK 122
           I EDR ASASKSHSQAEKRRRDRINAQLA LRKL+PKSDKMDKAALLGSAIDQVKDLKRK
Sbjct: 62  IAEDRGASASKSHSQAEKRRRDRINAQLAILRKLVPKSDKMDKAALLGSAIDQVKDLKRK 121

Query: 123 AMEASKNMTVPTDMDEVTIDSTVVEDN-SRNNIAIKVSVSCDDRPELFTELIQVIKGLKL 182
           A+E SKNMTVPTDMDEVTIDS +VEDN S +NIAIKVSVSCDDRPELFTELIQVIKGL+L
Sbjct: 122 AIEVSKNMTVPTDMDEVTIDSAMVEDNHSTDNIAIKVSVSCDDRPELFTELIQVIKGLRL 181

Query: 183 TTIRADMASVGGRIKSILILCNKDGEKSVCLNTVQQSLKLVLSRMSSSSTASTYRIRSKR 242
           TTIRADMASVGGRIKSIL+LCNKDGE+SVCLNTVQQSLKLVLSRMSSSSTAST RIRSKR
Sbjct: 182 TTIRADMASVGGRIKSILVLCNKDGERSVCLNTVQQSLKLVLSRMSSSSTASTCRIRSKR 241

Query: 243 QRFFLPSQYSK 248
           QRFFLPS +SK
Sbjct: 242 QRFFLPSHFSK 252

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BLAST of CsaV3_6G001900 vs. NCBI nr
Match: XP_022993156.1 (transcription factor bHLH51-like [Cucurbita maxima] >XP_022993157.1 transcription factor bHLH51-like [Cucurbita maxima] >XP_022993158.1 transcription factor bHLH51-like [Cucurbita maxima])

HSP 1 Score: 391.3 bits (1004), Expect = 2.4e-105
Identity = 220/251 (87.65%), Postives = 228/251 (90.84%), Query Frame = 0


Query: 1   MEDSNWDRSTKPEGLNFDHCNPNSSQEASLLLPWMINPQFSSSNEF----FPSFSTPSEG 60
           MED NWD STKPEGL       +SS+E SL LPWMINPQ SSS E     FPSFSTP EG
Sbjct: 1   MED-NWDSSTKPEGL-------DSSREPSLRLPWMINPQLSSSTELRIDGFPSFSTPVEG 60

Query: 61  IIVEDRAASASKSHSQAEKRRRDRINAQLATLRKLIPKSDKMDKAALLGSAIDQVKDLKR 120
           II EDRAASASKSHSQAEKRRRDRINAQLATLRKLIPKSDKMDKAALLGSAIDQVKDLKR
Sbjct: 61  IIGEDRAASASKSHSQAEKRRRDRINAQLATLRKLIPKSDKMDKAALLGSAIDQVKDLKR 120

Query: 121 KAMEASKNMTVPTDMDEVTIDSTVVEDNSRNNIAIKVSVSCDDRPELFTELIQVIKGLKL 180
           KAMEASKNMTVPTDMDEVTIDST+VED+SRNNI IKVSVSCDDRPELFTELIQVIKGL+L
Sbjct: 121 KAMEASKNMTVPTDMDEVTIDSTMVEDHSRNNIEIKVSVSCDDRPELFTELIQVIKGLRL 180

Query: 181 TTIRADMASVGGRIKSILILCNKDGEKSVCLNTVQQSLKLVLSRMSSSSTASTYRIRSKR 240
           TTIRADMASVGGRIKSIL+L NKDGEKSVCLNTVQQSLKLVLSR+SSSS+ASTYRIRSKR
Sbjct: 181 TTIRADMASVGGRIKSILVLGNKDGEKSVCLNTVQQSLKLVLSRLSSSSSASTYRIRSKR 240

Query: 241 QRFFLPSQYSK 248
           QRFFLPS YSK
Sbjct: 241 QRFFLPSHYSK 243

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BLAST of CsaV3_6G001900 vs. NCBI nr
Match: XP_023517820.1 (transcription factor bHLH51 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 386.7 bits (992), Expect = 5.8e-104
Identity = 210/250 (84.00%), Postives = 227/250 (90.80%), Query Frame = 0


Query: 3   DSNWD-RSTKPEGLNFDHCNPNSSQEASLLLPWMINPQFSSSNEF----FPSFSTPSEGI 62
           + NWD  STKPEG+N+ HCN NSS+E SLLLP+MINPQ SSS E     FPSFST +EG+
Sbjct: 2   EKNWDFSSTKPEGINWAHCNGNSSREPSLLLPFMINPQLSSSTEVQFDGFPSFSTSTEGM 61

Query: 63  IVEDRAASASKSHSQAEKRRRDRINAQLATLRKLIPKSDKMDKAALLGSAIDQVKDLKRK 122
           + + RA SASKSHSQAEKRRRDRINAQLATLRKLIPKSDKMDKAALLGSAIDQVKDLKRK
Sbjct: 62  VADVRAVSASKSHSQAEKRRRDRINAQLATLRKLIPKSDKMDKAALLGSAIDQVKDLKRK 121

Query: 123 AMEASKNMTVPTDMDEVTIDSTVVEDNSRNNIAIKVSVSCDDRPELFTELIQVIKGLKLT 182
           AME SKNMTVPTDMDE+TIDST+VEDN++NNIAIKVSVSCDDRPELF ELIQVIKGL+LT
Sbjct: 122 AMEVSKNMTVPTDMDELTIDSTMVEDNNKNNIAIKVSVSCDDRPELFAELIQVIKGLRLT 181

Query: 183 TIRADMASVGGRIKSILILCNKDGEKSVCLNTVQQSLKLVLSRMSSSSTASTYRIRSKRQ 242
           TIRADMASVGGRIKSIL+LCNKDGEK+VCL TVQQSLKLVLSR+SSSS AST RIRSKRQ
Sbjct: 182 TIRADMASVGGRIKSILVLCNKDGEKNVCLKTVQQSLKLVLSRISSSSAASTCRIRSKRQ 241

Query: 243 RFFLPSQYSK 248
           RFFLPS YSK
Sbjct: 242 RFFLPSHYSK 251

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BLAST of CsaV3_6G001900 vs. TAIR10
Match: AT2G40200.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 156.4 bits (394), Expect = 2.3e-38
Identity = 111/255 (43.53%), Postives = 158/255 (61.96%), Query Frame = 0


Query: 2   EDSNWDRSTKPEGLNFDHCNPNSSQEASLLLPW-MINPQFSSSNEFFPSFSTPSEGIIVE 61
           + S W  ST P  +++      S Q  S    W   N  FSSS+ F  +F  P++  +  
Sbjct: 6   DSSKWSDSTTPYMVSW------SLQSESSDSDWNRFNLGFSSSS-FGGNF--PADDCVGG 65

Query: 62  -DRAASASKSHSQAEKRRRDRINAQLATLRKLIPKSDKMDKAALLGSAIDQVKDLKRKAM 121
            ++A S S+SH  AEKRRRDRIN+ L  LRKL+P SDK+DKAALL + I+QVK+LK+KA 
Sbjct: 66  IEKAESLSRSHRLAEKRRRDRINSHLTALRKLVPNSDKLDKAALLATVIEQVKELKQKAA 125

Query: 122 EASKNMTVPTDMDEVTIDSTVVED--NSRNNIAIKVSVSCDDRPELFTELIQVIKGLKLT 181
           E+     +PT+ DEVT+    + D  ++ N I  K S  C+D+PE  +E+I+V+  L+L 
Sbjct: 126 ESPIFQDLPTEADEVTVQPETISDFESNTNTIIFKASFCCEDQPEAISEIIRVLTKLQLE 185

Query: 182 TIRADMASVGGRIKSILIL----CNKDGEKSVCLNTVQQSLKLVLSRMSSSS--TASTYR 241
           TI+A++ SVGGR++   IL    CN+    +     ++QSL   L+R++SSS  T+S  R
Sbjct: 186 TIQAEIISVGGRMRINFILKDSNCNETTNIAASAKALKQSLCSALNRITSSSTTTSSVCR 245

Query: 242 IRSKRQRFFLPSQYS 247
           IRSKRQR+FL S YS
Sbjct: 246 IRSKRQRWFLSSHYS 251

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BLAST of CsaV3_6G001900 vs. TAIR10
Match: AT1G68810.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 130.2 bits (326), Expect = 1.8e-30
Identity = 66/168 (39.29%), Postives = 112/168 (66.67%), Query Frame = 0


Query: 58  IVEDRAASASKSHSQAEKRRRDRINAQLATLRKLIPKSDKMDKAALLGSAIDQVKDLKRK 117
           I++ +A +ASKSHS+AE+RRR+RIN  LA LR ++P + K DKA+LL   I  VK+LKR+
Sbjct: 166 IMDAKALAASKSHSEAERRRRERINNHLAKLRSILPNTTKTDKASLLAEVIQHVKELKRE 225

Query: 118 AMEASKNMTVPTDMDEVTIDSTVVEDNSRNNIAIKVSVSCDDRPELFTELIQVIKGLKLT 177
               S+   VPT+ DE+T+  T  E+       IK S+ C+DR +L  ++I+ +K ++L 
Sbjct: 226 TSVISETNLVPTESDELTVAFTEEEETGDGRFVIKASLCCEDRSDLLPDMIKTLKAMRLK 285

Query: 178 TIRADMASVGGRIKSILILCNKDG-----EKSVCLNTVQQSLKLVLSR 221
           T++A++ +VGGR+K++L +  ++      E+  C+ T++++LK V+ +
Sbjct: 286 TLKAEITTVGGRVKNVLFVTGEESSGEEVEEEYCIGTIEEALKAVMEK 333

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BLAST of CsaV3_6G001900 vs. TAIR10
Match: AT3G56770.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 111.3 bits (277), Expect = 8.6e-25
Identity = 70/188 (37.23%), Postives = 122/188 (64.89%), Query Frame = 0


Query: 41  SSSNEFFPSFSTPSEGIIVEDRAASASKSHSQAEKRRRDRINAQLATLRKLIPKSDKMDK 100
           SS++    S S P    + ED+A ++ ++H +AE++RR RIN+ L  LRKL+  + K DK
Sbjct: 21  SSTSTTVTSSSDPF-ATVYEDKALASLRNHKEAERKRRARINSHLNKLRKLLSCNSKTDK 80

Query: 101 AALLGSAIDQVKDLKRKAMEASKNMTVPTDMDEVTIDSTVVEDNSRNN---IAIKVSVSC 160
           + LL   + +VK+LK++ +E + + T+P++ DE+++ +  +ED SR +   I  KVS  C
Sbjct: 81  STLLAKVVQRVKELKQQTLEIT-DETIPSETDEISVLN--IEDCSRGDDRRIIFKVSFCC 140

Query: 161 DDRPELFTELIQVIKGLKLTTIRADMASVGGRIKSILIL-CNKDGEKSVCLNTVQQSLKL 220
           +DRPEL  +L++ +K L++ T+ ADM +VGGR +++L++  +K+      +N +Q +LK 
Sbjct: 141 EDRPELLKDLMETLKSLQMETLFADMTTVGGRTRNVLVVAADKEHHGVQSVNFLQNALKS 200

Query: 221 VLSRMSSS 225
           +L R S S
Sbjct: 201 LLERSSKS 204

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BLAST of CsaV3_6G001900 vs. TAIR10
Match: AT2G41130.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 101.7 bits (252), Expect = 6.8e-22
Identity = 58/183 (31.69%), Postives = 117/183 (63.93%), Query Frame = 0


Query: 41  SSSNEFFPSFSTPSEGIIVEDRAASASKSHSQAEKRRRDRINAQLATLRKLIPKSDKMDK 100
           SS++ ++P   +     + +DRA +A ++H +AE+RRR+RIN+ L  LR ++  + K DK
Sbjct: 42  SSTSSYYPLAISGIGETMAQDRALAALRNHKEAERRRRERINSHLNKLRNVLSCNSKTDK 101

Query: 101 AALLGSAIDQVKDLKRKAMEASKN--MTVPTDMDEVTIDSTVVEDNSRNNIAIKVSVSCD 160
           A LL   + +V++LK++ +E S +    +P++ DE+++     + ++  +I  K S+ C+
Sbjct: 102 ATLLAKVVQRVRELKQQTLETSDSDQTLLPSETDEISV-LHFGDYSNDGHIIFKASLCCE 161

Query: 161 DRPELFTELIQVIKGLKLTTIRADMASVGGRIKSILIL-CNKDGEKSVCLNTVQQSLKLV 220
           DR +L  +L++++K L + T+RA+M ++GGR +S+L++  +K+      ++ +Q +LK +
Sbjct: 162 DRSDLLPDLMEILKSLNMKTLRAEMVTIGGRTRSVLVVAADKEMHGVESVHFLQNALKSL 221

[Close]

BLAST of CsaV3_6G001900 vs. TAIR10
Match: AT3G25710.1 (basic helix-loop-helix 32)

HSP 1 Score: 100.5 bits (249), Expect = 1.5e-21
Identity = 53/139 (38.13%), Postives = 89/139 (64.03%), Query Frame = 0


Query: 58  IVEDRAASASKSHSQAEKRRRDRINAQLATLRKLIPKSDKMDKAALLGSAIDQVKDLKRK 117
           +++ +A +ASKS         +RIN  LA LR ++P + K DKA+LL   I  +K+LKR+
Sbjct: 124 VMDAKALAASKSXXXXXXXXXERINTHLAKLRSILPNTTKTDKASLLAEVIQHMKELKRQ 183

Query: 118 AMEASKNMTVPTDMDEVTIDSTVVEDNSRNNIAIKVSVSCDDRPELFTELIQVIKGLKLT 177
             + +    VPT+ D++T+DS+   ++   N+ I+ S  C DR +L  ++I  +K L+L 
Sbjct: 184 TSQITDTYQVPTECDDLTVDSSY--NDEEGNLVIRASFCCQDRTDLMHDVINALKSLRLR 243

Query: 178 TIRADMASVGGRIKSILIL 197
           T++A++A+VGGR+K+IL L
Sbjct: 244 TLKAEIATVGGRVKNILFL 260

[Close]

BLAST of CsaV3_6G001900 vs. Swiss-Prot
Match: sp|Q9XEF0|BH051_ARATH (Transcription factor bHLH51 OS=Arabidopsis thaliana OX=3702 GN=BHLH51 PE=2 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 4.2e-37
Identity = 111/255 (43.53%), Postives = 158/255 (61.96%), Query Frame = 0


Query: 2   EDSNWDRSTKPEGLNFDHCNPNSSQEASLLLPW-MINPQFSSSNEFFPSFSTPSEGIIVE 61
           + S W  ST P  +++      S Q  S    W   N  FSSS+ F  +F  P++  +  
Sbjct: 6   DSSKWSDSTTPYMVSW------SLQSESSDSDWNRFNLGFSSSS-FGGNF--PADDCVGG 65

Query: 62  -DRAASASKSHSQAEKRRRDRINAQLATLRKLIPKSDKMDKAALLGSAIDQVKDLKRKAM 121
            ++A S S+SH  AEKRRRDRIN+ L  LRKL+P SDK+DKAALL + I+QVK+LK+KA 
Sbjct: 66  IEKAESLSRSHRLAEKRRRDRINSHLTALRKLVPNSDKLDKAALLATVIEQVKELKQKAA 125

Query: 122 EASKNMTVPTDMDEVTIDSTVVED--NSRNNIAIKVSVSCDDRPELFTELIQVIKGLKLT 181
           E+     +PT+ DEVT+    + D  ++ N I  K S  C+D+PE  +E+I+V+  L+L 
Sbjct: 126 ESPIFQDLPTEADEVTVQPETISDFESNTNTIIFKASFCCEDQPEAISEIIRVLTKLQLE 185

Query: 182 TIRADMASVGGRIKSILIL----CNKDGEKSVCLNTVQQSLKLVLSRMSSSS--TASTYR 241
           TI+A++ SVGGR++   IL    CN+    +     ++QSL   L+R++SSS  T+S  R
Sbjct: 186 TIQAEIISVGGRMRINFILKDSNCNETTNIAASAKALKQSLCSALNRITSSSTTTSSVCR 245

Query: 242 IRSKRQRFFLPSQYS 247
           IRSKRQR+FL S YS
Sbjct: 246 IRSKRQRWFLSSHYS 251

[Close]

BLAST of CsaV3_6G001900 vs. Swiss-Prot
Match: sp|Q9S7Y1|BH030_ARATH (Transcription factor bHLH30 OS=Arabidopsis thaliana OX=3702 GN=BHLH30 PE=1 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 3.2e-29
Identity = 66/168 (39.29%), Postives = 112/168 (66.67%), Query Frame = 0


Query: 58  IVEDRAASASKSHSQAEKRRRDRINAQLATLRKLIPKSDKMDKAALLGSAIDQVKDLKRK 117
           I++ +A +ASKSHS+AE+RRR+RIN  LA LR ++P + K DKA+LL   I  VK+LKR+
Sbjct: 166 IMDAKALAASKSHSEAERRRRERINNHLAKLRSILPNTTKTDKASLLAEVIQHVKELKRE 225

Query: 118 AMEASKNMTVPTDMDEVTIDSTVVEDNSRNNIAIKVSVSCDDRPELFTELIQVIKGLKLT 177
               S+   VPT+ DE+T+  T  E+       IK S+ C+DR +L  ++I+ +K ++L 
Sbjct: 226 TSVISETNLVPTESDELTVAFTEEEETGDGRFVIKASLCCEDRSDLLPDMIKTLKAMRLK 285

Query: 178 TIRADMASVGGRIKSILILCNKDG-----EKSVCLNTVQQSLKLVLSR 221
           T++A++ +VGGR+K++L +  ++      E+  C+ T++++LK V+ +
Sbjct: 286 TLKAEITTVGGRVKNVLFVTGEESSGEEVEEEYCIGTIEEALKAVMEK 333

[Close]

BLAST of CsaV3_6G001900 vs. Swiss-Prot
Match: sp|Q9LET0|BH107_ARATH (Putative transcription factor bHLH107 OS=Arabidopsis thaliana OX=3702 GN=BHLH107 PE=3 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 1.5e-23
Identity = 70/188 (37.23%), Postives = 122/188 (64.89%), Query Frame = 0


Query: 41  SSSNEFFPSFSTPSEGIIVEDRAASASKSHSQAEKRRRDRINAQLATLRKLIPKSDKMDK 100
           SS++    S S P    + ED+A ++ ++H +AE++RR RIN+ L  LRKL+  + K DK
Sbjct: 21  SSTSTTVTSSSDPF-ATVYEDKALASLRNHKEAERKRRARINSHLNKLRKLLSCNSKTDK 80

Query: 101 AALLGSAIDQVKDLKRKAMEASKNMTVPTDMDEVTIDSTVVEDNSRNN---IAIKVSVSC 160
           + LL   + +VK+LK++ +E + + T+P++ DE+++ +  +ED SR +   I  KVS  C
Sbjct: 81  STLLAKVVQRVKELKQQTLEIT-DETIPSETDEISVLN--IEDCSRGDDRRIIFKVSFCC 140

Query: 161 DDRPELFTELIQVIKGLKLTTIRADMASVGGRIKSILIL-CNKDGEKSVCLNTVQQSLKL 220
           +DRPEL  +L++ +K L++ T+ ADM +VGGR +++L++  +K+      +N +Q +LK 
Sbjct: 141 EDRPELLKDLMETLKSLQMETLFADMTTVGGRTRNVLVVAADKEHHGVQSVNFLQNALKS 200

Query: 221 VLSRMSSS 225
           +L R S S
Sbjct: 201 LLERSSKS 204

[Close]

BLAST of CsaV3_6G001900 vs. Swiss-Prot
Match: sp|O80674|BH106_ARATH (Transcription factor bHLH106 OS=Arabidopsis thaliana OX=3702 GN=BHLH106 PE=2 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 1.2e-20
Identity = 58/183 (31.69%), Postives = 117/183 (63.93%), Query Frame = 0


Query: 41  SSSNEFFPSFSTPSEGIIVEDRAASASKSHSQAEKRRRDRINAQLATLRKLIPKSDKMDK 100
           SS++ ++P   +     + +DRA +A ++H +AE+RRR+RIN+ L  LR ++  + K DK
Sbjct: 42  SSTSSYYPLAISGIGETMAQDRALAALRNHKEAERRRRERINSHLNKLRNVLSCNSKTDK 101

Query: 101 AALLGSAIDQVKDLKRKAMEASKN--MTVPTDMDEVTIDSTVVEDNSRNNIAIKVSVSCD 160
           A LL   + +V++LK++ +E S +    +P++ DE+++     + ++  +I  K S+ C+
Sbjct: 102 ATLLAKVVQRVRELKQQTLETSDSDQTLLPSETDEISV-LHFGDYSNDGHIIFKASLCCE 161

Query: 161 DRPELFTELIQVIKGLKLTTIRADMASVGGRIKSILIL-CNKDGEKSVCLNTVQQSLKLV 220
           DR +L  +L++++K L + T+RA+M ++GGR +S+L++  +K+      ++ +Q +LK +
Sbjct: 162 DRSDLLPDLMEILKSLNMKTLRAEMVTIGGRTRSVLVVAADKEMHGVESVHFLQNALKSL 221

[Close]

BLAST of CsaV3_6G001900 vs. Swiss-Prot
Match: sp|Q9LS08|BH032_ARATH (Transcription factor AIG1 OS=Arabidopsis thaliana OX=3702 GN=BHLH32 PE=1 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 2.7e-20
Identity = 53/139 (38.13%), Postives = 89/139 (64.03%), Query Frame = 0


Query: 58  IVEDRAASASKSHSQAEKRRRDRINAQLATLRKLIPKSDKMDKAALLGSAIDQVKDLKRK 117
           +++ +A +ASKS         +RIN  LA LR ++P + K DKA+LL   I  +K+LKR+
Sbjct: 124 VMDAKALAASKSXXXXXXXXXERINTHLAKLRSILPNTTKTDKASLLAEVIQHMKELKRQ 183

Query: 118 AMEASKNMTVPTDMDEVTIDSTVVEDNSRNNIAIKVSVSCDDRPELFTELIQVIKGLKLT 177
             + +    VPT+ D++T+DS+   ++   N+ I+ S  C DR +L  ++I  +K L+L 
Sbjct: 184 TSQITDTYQVPTECDDLTVDSSY--NDEEGNLVIRASFCCQDRTDLMHDVINALKSLRLR 243

Query: 178 TIRADMASVGGRIKSILIL 197
           T++A++A+VGGR+K+IL L
Sbjct: 244 TLKAEIATVGGRVKNILFL 260

[Close]

BLAST of CsaV3_6G001900 vs. TrEMBL
Match: tr|A0A0A0KDD1|A0A0A0KDD1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G011720 PE=4 SV=1)

HSP 1 Score: 466.1 bits (1198), Expect = 5.0e-128
Identity = 247/247 (100.00%), Postives = 247/247 (100.00%), Query Frame = 0


Query: 1   MEDSNWDRSTKPEGLNFDHCNPNSSQEASLLLPWMINPQFSSSNEFFPSFSTPSEGIIVE 60
           MEDSNWDRSTKPEGLNFDHCNPNSSQEASLLLPWMINPQFSSSNEFFPSFSTPSEGIIVE
Sbjct: 1   MEDSNWDRSTKPEGLNFDHCNPNSSQEASLLLPWMINPQFSSSNEFFPSFSTPSEGIIVE 60

Query: 61  DRAASASKSHSQAEKRRRDRINAQLATLRKLIPKSDKMDKAALLGSAIDQVKDLKRKAME 120
           DRAASASKSHSQAEKRRRDRINAQLATLRKLIPKSDKMDKAALLGSAIDQVKDLKRKAME
Sbjct: 61  DRAASASKSHSQAEKRRRDRINAQLATLRKLIPKSDKMDKAALLGSAIDQVKDLKRKAME 120

Query: 121 ASKNMTVPTDMDEVTIDSTVVEDNSRNNIAIKVSVSCDDRPELFTELIQVIKGLKLTTIR 180
           ASKNMTVPTDMDEVTIDSTVVEDNSRNNIAIKVSVSCDDRPELFTELIQVIKGLKLTTIR
Sbjct: 121 ASKNMTVPTDMDEVTIDSTVVEDNSRNNIAIKVSVSCDDRPELFTELIQVIKGLKLTTIR 180

Query: 181 ADMASVGGRIKSILILCNKDGEKSVCLNTVQQSLKLVLSRMSSSSTASTYRIRSKRQRFF 240
           ADMASVGGRIKSILILCNKDGEKSVCLNTVQQSLKLVLSRMSSSSTASTYRIRSKRQRFF
Sbjct: 181 ADMASVGGRIKSILILCNKDGEKSVCLNTVQQSLKLVLSRMSSSSTASTYRIRSKRQRFF 240

Query: 241 LPSQYSK 248
           LPSQYSK
Sbjct: 241 LPSQYSK 247

[Close]

BLAST of CsaV3_6G001900 vs. TrEMBL
Match: tr|A0A1S3B4A6|A0A1S3B4A6_CUCME (transcription factor bHLH51 OS=Cucumis melo OX=3656 GN=LOC103485584 PE=4 SV=1)

HSP 1 Score: 451.1 bits (1159), Expect = 1.7e-123
Identity = 239/246 (97.15%), Postives = 242/246 (98.37%), Query Frame = 0


Query: 1   MEDSNWDRSTKPEGLNFDHCNPNSSQEASLLLPWMINPQFSSSNEFFPSFSTPSEGIIVE 60
           MED+NWDRSTKPEGLNFDHCNPNSS EASLL PWMINPQFSSSNEFFPSFS+PSEGIIVE
Sbjct: 1   MEDNNWDRSTKPEGLNFDHCNPNSSHEASLLHPWMINPQFSSSNEFFPSFSSPSEGIIVE 60

Query: 61  DRAASASKSHSQAEKRRRDRINAQLATLRKLIPKSDKMDKAALLGSAIDQVKDLKRKAME 120
           DRAASASKSHSQAEKRRRDRINAQLATLRKLIPKSDKMDKAALLGSAIDQVKDLKRKAME
Sbjct: 61  DRAASASKSHSQAEKRRRDRINAQLATLRKLIPKSDKMDKAALLGSAIDQVKDLKRKAME 120

Query: 121 ASKNMTVPTDMDEVTIDSTVVEDNSRNNIAIKVSVSCDDRPELFTELIQVIKGLKLTTIR 180
           ASKNMTVPTDMDEVTIDST+VEDNS NNIAIKVSVSCDDRPEL TELIQVIKGLKLTTIR
Sbjct: 121 ASKNMTVPTDMDEVTIDSTMVEDNSSNNIAIKVSVSCDDRPELLTELIQVIKGLKLTTIR 180

Query: 181 ADMASVGGRIKSILILCNKDGEKSVCLNTVQQSLKLVLSRMSSSSTASTYRIRSKRQRFF 240
           ADMASVGGRIKSILILCNKDGEKSVCLNTVQQSLKLVLSRMSSSSTASTYRIRSKRQRFF
Sbjct: 181 ADMASVGGRIKSILILCNKDGEKSVCLNTVQQSLKLVLSRMSSSSTASTYRIRSKRQRFF 240

Query: 241 LPSQYS 247
           LPSQYS
Sbjct: 241 LPSQYS 246

[Close]

BLAST of CsaV3_6G001900 vs. TrEMBL
Match: tr|A0A2R6RTG6|A0A2R6RTG6_ACTCH (Transcription factor bHLH51 like OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc03698 PE=4 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 2.6e-68
Identity = 141/189 (74.60%), Postives = 169/189 (89.42%), Query Frame = 0


Query: 56  GIIVEDRAASASKSHSQAEKRRRDRINAQLATLRKLIPKSDKMDKAALLGSAIDQVKDLK 115
           G ++EDR+AS+SKSHSQAEKRRRDRINAQLATLRKLIPKSDKMDKAALLGS ++ VKDLK
Sbjct: 4   GGVIEDRSASSSKSHSQAEKRRRDRINAQLATLRKLIPKSDKMDKAALLGSVVEHVKDLK 63

Query: 116 RKAMEASKNMTVPTDMDEVTIDSTVV-EDNSRNNIAIKVSVSCDDRPELFTELIQVIKGL 175
           RKA+E SK++TVPT++DEVTID   + +D +  NI IK SV CDDRPELF EL Q ++GL
Sbjct: 64  RKALEVSKSLTVPTEVDEVTIDYFYLDQDKTEENIFIKASVCCDDRPELFAELTQALRGL 123

Query: 176 KLTTIRADMASVGGRIKSILILCNKDGEKSVCLNTVQQSLKLVLSRMSSSSTASTYRIRS 235
           KLTT+RADMAS+GGRIKSIL+LCNKDG++ VC+NTV QSLK VLSR++++STAS+YR+RS
Sbjct: 124 KLTTVRADMASLGGRIKSILVLCNKDGKEGVCVNTVVQSLKGVLSRIAAASTASSYRMRS 183

Query: 236 KRQRFFLPS 244
           KRQRFFLPS
Sbjct: 184 KRQRFFLPS 192

[Close]

BLAST of CsaV3_6G001900 vs. TrEMBL
Match: tr|A0A2N9ITD1|A0A2N9ITD1_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS56588 PE=4 SV=1)

HSP 1 Score: 263.1 bits (671), Expect = 6.4e-67
Identity = 147/244 (60.25%), Postives = 184/244 (75.41%), Query Frame = 0


Query: 12  PEGLNFDHCNPNSSQEASLLLPWMINPQFSSSNEF----FPSFSTPSEGIIVEDRAASA- 71
           PE  N+  C+   + E+S L+PW + P   +S +F     PS+S P EG+  +   A+A 
Sbjct: 10  PEEENWAQCHAPLNNESSYLVPWPLPPHVQASTKFEYHGLPSWSMPIEGVAEDGGGATAS 69

Query: 72  -SKSHSQAEKRRRDRINAQLATLRKLIPKSDKMDKAALLGSAIDQVKDLKRKAMEASKNM 131
            SKSHSQAEKRRRDRINAQLATLRKLIPKSDKMDKAALLG+ ID VKDLKRKAME SK  
Sbjct: 70  NSKSHSQAEKRRRDRINAQLATLRKLIPKSDKMDKAALLGTVIDHVKDLKRKAMEVSKAC 129

Query: 132 TVPTDMDEVTIDSTVVE-------DNSRNNIAIKVSVSCDDRPELFTELIQVIKGLKLTT 191
           T+PT++DEVTID  + +       D S++N+ IK S  CDDRPELF+ELI V+K L+LT 
Sbjct: 130 TLPTEVDEVTIDYDLAQDVNLTNVDKSKDNVFIKASFCCDDRPELFSELIHVLKSLRLTA 189

Query: 192 IRADMASVGGRIKSILILCNKDGEKSVCLNTVQQSLKLVLSRMSSSSTASTYRIRSKRQR 243
           ++AD+ASVGGRI+SIL+LC K+ E  VC++T++QSLKLVLS+++SSS  S  RIRSKRQR
Sbjct: 190 VKADIASVGGRIRSILVLCTKESEVGVCVSTLKQSLKLVLSKIASSSVQSNCRIRSKRQR 249

[Close]

BLAST of CsaV3_6G001900 vs. TrEMBL
Match: tr|D7T4M2|D7T4M2_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_13s0067g01350 PE=4 SV=1)

HSP 1 Score: 262.3 bits (669), Expect = 1.1e-66
Identity = 151/232 (65.09%), Postives = 184/232 (79.31%), Query Frame = 0


Query: 27  EASLLLPWMINPQFSSSNEF--FPSFSTPSEGIIVEDRA----ASASKSHSQAEKRRRDR 86
           +A+ +LPW+  P  S+S +F  FPS+S P E +  EDR+    A+ASKSHSQAEKRRRDR
Sbjct: 64  DAAPVLPWLPPPHVSASFQFHGFPSWSLPVEKMATEDRSDERTATASKSHSQAEKRRRDR 123

Query: 87  INAQLATLRKLIPKSDKMDKAALLGSAIDQVKDLKRKAMEASKNMTVPTDMDEVTI---- 146
           INAQLATLRKLIPKS+KMDKAALLGS ID VKDLKR+AME S   TVPT++DEVT+    
Sbjct: 124 INAQLATLRKLIPKSEKMDKAALLGSVIDHVKDLKRQAMEVSDVFTVPTEVDEVTVDCEF 183

Query: 147 DSTVVEDN---SRNNIAIKVSVSCDDRPELFTELIQVIKGLKLTTIRADMASVGGRIKSI 206
           D  +V +N   +  NI IK SV C+DRPELF+ELI+ ++GLKLTTIRADMAS+ GR KSI
Sbjct: 184 DQGLVPNNTIKTPENIFIKASVCCEDRPELFSELIRALQGLKLTTIRADMASLSGRTKSI 243

Query: 207 LILCNKDGEKSVCLNTVQQSLKLVLSRMSSSSTASTYRIRSKRQRFFLPSQY 246
           L+LC+KD   SVC++T++QSLK+VLSR+ SSSTAS YRI SKRQRFFLPS +
Sbjct: 244 LVLCSKDDSNSVCISTLKQSLKVVLSRIVSSSTASNYRITSKRQRFFLPSNF 295

The following BLAST results are available for this feature:

BLAST of CsaV3_6G001900 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004138418.2	7.6e-128	100.00	PREDICTED: transcription factor bHLH51 [Cucumis sativus] >KGN45796.1 hypothetica...	[more]
XP_008441476.1	2.5e-123	97.15	PREDICTED: transcription factor bHLH51 [Cucumis melo]	[more]
XP_022134346.1	7.4e-107	86.85	transcription factor bHLH51-like [Momordica charantia]	[more]
XP_022993156.1	2.4e-105	87.65	transcription factor bHLH51-like [Cucurbita maxima] >XP_022993157.1 transcriptio...	[more]
XP_023517820.1	5.8e-104	84.00	transcription factor bHLH51 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsaV3_6G001900 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G40200.1	2.3e-38	43.53	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G68810.1	1.8e-30	39.29	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G56770.1	8.6e-25	37.23	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT2G41130.1	6.8e-22	31.69	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G25710.1	1.5e-21	38.13	basic helix-loop-helix 32	[more]

BLAST of CsaV3_6G001900 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9XEF0\|BH051_ARATH	4.2e-37	43.53	Transcription factor bHLH51 OS=Arabidopsis thaliana OX=3702 GN=BHLH51 PE=2 SV=1	[more]
sp\|Q9S7Y1\|BH030_ARATH	3.2e-29	39.29	Transcription factor bHLH30 OS=Arabidopsis thaliana OX=3702 GN=BHLH30 PE=1 SV=1	[more]
sp\|Q9LET0\|BH107_ARATH	1.5e-23	37.23	Putative transcription factor bHLH107 OS=Arabidopsis thaliana OX=3702 GN=BHLH107...	[more]
sp\|O80674\|BH106_ARATH	1.2e-20	31.69	Transcription factor bHLH106 OS=Arabidopsis thaliana OX=3702 GN=BHLH106 PE=2 SV=...	[more]
sp\|Q9LS08\|BH032_ARATH	2.7e-20	38.13	Transcription factor AIG1 OS=Arabidopsis thaliana OX=3702 GN=BHLH32 PE=1 SV=1	[more]

BLAST of CsaV3_6G001900 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KDD1\|A0A0A0KDD1_CUCSA	5.0e-128	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G011720 PE=4 SV=1	[more]
tr\|A0A1S3B4A6\|A0A1S3B4A6_CUCME	1.7e-123	97.15	transcription factor bHLH51 OS=Cucumis melo OX=3656 GN=LOC103485584 PE=4 SV=1	[more]
tr\|A0A2R6RTG6\|A0A2R6RTG6_ACTCH	2.6e-68	74.60	Transcription factor bHLH51 like OS=Actinidia chinensis var. chinensis OX=159084...	[more]
tr\|A0A2N9ITD1\|A0A2N9ITD1_FAGSY	6.4e-67	60.25	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS56588 PE=4 SV=1	[more]
tr\|D7T4M2\|D7T4M2_VITVI	1.1e-66	65.09	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_13s0067g01350 PE=4 SV=...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0046983	protein dimerization activity

Vocabulary: **INTERPRO**
Term	Definition
IPR036638	HLH_DNA-bd_sf
IPR011598	bHLH_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005667	transcription factor complex
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_6G001900.1	CsaV3_6G001900.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 104..124
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22
None	No IPR available	PANTHER	PTHR12565:SF181	SUBFAMILY NOT NAMED	coord: 45..231
None	No IPR available	PANTHER	PTHR12565	STEROL REGULATORY ELEMENT-BINDING PROTEIN	coord: 45..231
None	No IPR available	CDD	cd04873	ACT_UUR-ACR-like	coord: 153..204 e-value: 6.19686E-4 score: 35.6017
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SMART	SM00353	finulus	coord: 71..120 e-value: 1.8E-11 score: 54.1
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 68..114 e-value: 3.1E-11 score: 42.9
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 65..114 score: 15.466
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	CDD	cd00083	HLH	coord: 68..117 e-value: 1.49524E-9 score: 51.4459
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	G3DSA:4.10.280.10		coord: 59..115 e-value: 2.2E-16 score: 61.4
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	SSF47459	HLH, helix-loop-helix DNA-binding domain	coord: 66..118

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_6G001900	CSPI06G01770	Wild cucumber (PI 183967)	cpicucB364
CsaV3_6G001900	Cucsa.136730	Cucumber (Gy14) v1	cgycucB203
CsaV3_6G001900	CmaCh15G001390	Cucurbita maxima (Rimu)	cmacucB0363
CsaV3_6G001900	CmaCh04G028970	Cucurbita maxima (Rimu)	cmacucB0906
CsaV3_6G001900	CmoCh15G001550	Cucurbita moschata (Rifu)	cmocucB0358
CsaV3_6G001900	CmoCh04G030200	Cucurbita moschata (Rifu)	cmocucB0899
CsaV3_6G001900	Cp4.1LG13g07410	Cucurbita pepo (Zucchini)	cpecucB0238
CsaV3_6G001900	Cp4.1LG01g21720	Cucurbita pepo (Zucchini)	cpecucB0569
CsaV3_6G001900	CsGy6G001860	Cucumber (Gy14) v2	cgybcucB298
CsaV3_6G001900	Carg05970	Silver-seed gourd	carcucB0024
CsaV3_6G001900	Carg02130	Silver-seed gourd	carcucB0300
CsaV3_6G001900	Cla006599	Watermelon (97103) v1	cucwmB558
CsaV3_6G001900	MELO3C008307	Melon (DHL92) v3.5.1	cucmeB476
CsaV3_6G001900	ClCG11G006060	Watermelon (Charleston Gray)	cucwcgB452
CsaV3_6G001900	Lsi03G003000	Bottle gourd (USVL1VR-Ls)	cuclsiB473
CsaV3_6G001900	MELO3C008307.2	Melon (DHL92) v3.6.1	cucmedB466
CsaV3_6G001900	Cla97C11G212990	Watermelon (97103) v2	cucwmbB441
CsaV3_6G001900	Bhi04G001880	Wax gourd	cucwgoB605

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_6G001900	Cucumber (Chinese Long) v3	cuccucB179
CsaV3_6G001900	Cucumber (Chinese Long) v3	cuccucB203
CsaV3_6G001900	Silver-seed gourd	carcucB0594
CsaV3_6G001900	Silver-seed gourd	carcucB0711
CsaV3_6G001900	Cucumber (Gy14) v2	cgybcucB189
CsaV3_6G001900	Cucumber (Gy14) v2	cgybcucB242
CsaV3_6G001900	Cucumber (Gy14) v1	cgycucB218
CsaV3_6G001900	Cucurbita maxima (Rimu)	cmacucB0811
CsaV3_6G001900	Cucurbita maxima (Rimu)	cmacucB0912
CsaV3_6G001900	Cucurbita maxima (Rimu)	cmacucB0913
CsaV3_6G001900	Cucurbita maxima (Rimu)	cmacucB1033
CsaV3_6G001900	Cucurbita moschata (Rifu)	cmocucB0795
CsaV3_6G001900	Cucurbita moschata (Rifu)	cmocucB0903
CsaV3_6G001900	Cucurbita moschata (Rifu)	cmocucB1017
CsaV3_6G001900	Cucurbita pepo (Zucchini)	cpecucB0094
CsaV3_6G001900	Cucurbita pepo (Zucchini)	cpecucB0574
CsaV3_6G001900	Cucurbita pepo (Zucchini)	cpecucB0621
CsaV3_6G001900	Wild cucumber (PI 183967)	cpicucB240
CsaV3_6G001900	Bottle gourd (USVL1VR-Ls)	cuclsiB459
CsaV3_6G001900	Bottle gourd (USVL1VR-Ls)	cuclsiB487
CsaV3_6G001900	Melon (DHL92) v3.5.1	cucmeB465
CsaV3_6G001900	Melon (DHL92) v3.5.1	cucmeB525
CsaV3_6G001900	Watermelon (Charleston Gray)	cucwcgB488
CsaV3_6G001900	Watermelon (Charleston Gray)	cucwcgB510
CsaV3_6G001900	Watermelon (97103) v1	cucwmB508
CsaV3_6G001900	Watermelon (97103) v1	cucwmB511
CsaV3_6G001900	Watermelon (97103) v1	cucwmB533
CsaV3_6G001900	Watermelon (97103) v2	cucwmbB476
CsaV3_6G001900	Watermelon (97103) v2	cucwmbB500