CsaV3_6G000850 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_6G000850
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr6 : 548986 .. 550362 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AGGAGGGAAGGGCAAAAGATAGAACCAAATTCTTGTGCTCCTACGTCCACTTCCATTTCCATTTTTGCAAAAAATCGTAAGAAAAGGATGTGGTCATTCAGAGTCGCCGTCGACGATATGAAGGTTCTGATAGATTCGTTGATAACATTGGGATTGGTGGATGTAATGGCGGATGCAATATTTTCACCGGACATGTTTTGCATATTGGCGGATTCAGATGTTTCCCTTCAAAGCGCCTTCGGACTTCAACTCTGGCCTCCATTCTTCGACAGTTTCTACTCCGACAACCTTCGTCAAATATTCTGGTTCCGCCTTACTCATCTTTTCCCTCTCGCCGTAGAATTGCTAGAATCTGGTTACACTTCTCTAACCTTCTCTATCGAACGCTTCCGTCACAATTACGCCCAATTCAAATTCGAAGGACCAAACGGTAAGTCTTCTTCTTCTTCTTCTTCTTCTTCTTTCTTTCTTTTTTTTTTTTTTTTCAAGATTTTTATTTATTTGATTTCTGGAAAGTAATTCTGTTTTCTAGGGCTTCTTCGCGAGGTTAATTTCCGATTGACTCCGATCGTCCGTCCCTTGAGGATAGGCCAAATCGATCTATCCGCTTTTGTTACCATGGATTCTCAAGAATTCTCGTACATCATCTCTCAATATAATATGTTTGATTACGGTAAATTACTACTTTAGTTTCAATTTCAATTTCAATTTTAGTCAATAGAGAAACCCTAAACCCTTATTATTATTTACAGTTGAAGTTATTATAACGAGCAGACGGGTGTCATTCTCTTCTTCAACTATACAGGAGACGACAATTAGTGCAGAGGTATATGATTTTAGTTTTGAGGATGTTAATTAATGAATTGATGTAAAAGTATGGTTTAATTGTTGGTAATAATTAATGTAGGATGGGCGATGCATAGTTGGGGGTGTTAGAGCACCGGTTCAAGTTCAGTTCATAATTACTATGAGTCAACCAAATGCATTCTTTCATTTTGCAAGTCAATCGAAGAGAATATGGCTGTTTAAGGAAGTTAATTCTACCAAAGGAATAATTACTGCCCCTCTTGGATTGTATGGTCGACTTGTCTCTTTCTTTTGTGATGACTCTACACTACCTATGTAATTGAATTACATATAATTCAATATTATATGTCTCTCTATCTTCTTTTTTGTACAAAAAATAATCACATTTGTTCCAGAGGTTGTACATAATCTTGATGATTGAATCACATATAATTCAATACTGTATGTTTCTCTCTTTTCCTTTTTTTTATAAAAATAATGAC

mRNA sequence

ATGTGGTCATTCAGAGTCGCCGTCGACGATATGAAGGTTCTGATAGATTCGTTGATAACATTGGGATTGGTGGATGTAATGGCGGATGCAATATTTTCACCGGACATGTTTTGCATATTGGCGGATTCAGATGTTTCCCTTCAAAGCGCCTTCGGACTTCAACTCTGGCCTCCATTCTTCGACAGTTTCTACTCCGACAACCTTCGTCAAATATTCTGGTTCCGCCTTACTCATCTTTTCCCTCTCGCCGTAGAATTGCTAGAATCTGGTTACACTTCTCTAACCTTCTCTATCGAACGCTTCCGTCACAATTACGCCCAATTCAAATTCGAAGGACCAAACGGGCTTCTTCGCGAGGTTAATTTCCGATTGACTCCGATCGTCCGTCCCTTGAGGATAGGCCAAATCGATCTATCCGCTTTTGTTACCATGGATTCTCAAGAATTCTCGTACATCATCTCTCAATATAATATGTTTGATTACGTTGAAGTTATTATAACGAGCAGACGGGTGTCATTCTCTTCTTCAACTATACAGGAGACGACAATTAGTGCAGAGGATGGGCGATGCATAGTTGGGGGTGTTAGAGCACCGGTTCAAGTTCAGTTCATAATTACTATGAGTCAACCAAATGCATTCTTTCATTTTGCAAGTCAATCGAAGAGAATATGGCTGTTTAAGGAAGTTAATTCTACCAAAGGAATAATTACTGCCCCTCTTGGATTGTATGGTCGACTTGTCTCTTTCTTTTGTGATGACTCTACACTACCTATGTAA

Coding sequence (CDS)

ATGTGGTCATTCAGAGTCGCCGTCGACGATATGAAGGTTCTGATAGATTCGTTGATAACATTGGGATTGGTGGATGTAATGGCGGATGCAATATTTTCACCGGACATGTTTTGCATATTGGCGGATTCAGATGTTTCCCTTCAAAGCGCCTTCGGACTTCAACTCTGGCCTCCATTCTTCGACAGTTTCTACTCCGACAACCTTCGTCAAATATTCTGGTTCCGCCTTACTCATCTTTTCCCTCTCGCCGTAGAATTGCTAGAATCTGGTTACACTTCTCTAACCTTCTCTATCGAACGCTTCCGTCACAATTACGCCCAATTCAAATTCGAAGGACCAAACGGGCTTCTTCGCGAGGTTAATTTCCGATTGACTCCGATCGTCCGTCCCTTGAGGATAGGCCAAATCGATCTATCCGCTTTTGTTACCATGGATTCTCAAGAATTCTCGTACATCATCTCTCAATATAATATGTTTGATTACGTTGAAGTTATTATAACGAGCAGACGGGTGTCATTCTCTTCTTCAACTATACAGGAGACGACAATTAGTGCAGAGGATGGGCGATGCATAGTTGGGGGTGTTAGAGCACCGGTTCAAGTTCAGTTCATAATTACTATGAGTCAACCAAATGCATTCTTTCATTTTGCAAGTCAATCGAAGAGAATATGGCTGTTTAAGGAAGTTAATTCTACCAAAGGAATAATTACTGCCCCTCTTGGATTGTATGGTCGACTTGTCTCTTTCTTTTGTGATGACTCTACACTACCTATGTAA

Protein sequence

MWSFRVAVDDMKVLIDSLITLGLVDVMADAIFSPDMFCILADSDVSLQSAFGLQLWPPFFDSFYSDNLRQIFWFRLTHLFPLAVELLESGYTSLTFSIERFRHNYAQFKFEGPNGLLREVNFRLTPIVRPLRIGQIDLSAFVTMDSQEFSYIISQYNMFDYVEVIITSRRVSFSSSTIQETTISAEDGRCIVGGVRAPVQVQFIITMSQPNAFFHFASQSKRIWLFKEVNSTKGIITAPLGLYGRLVSFFCDDSTLPM
Homology
[Close]
BLAST of CsaV3_6G000850 vs. NCBI nr
Match: XP_004138491.2 (PREDICTED: uncharacterized protein LOC101219791 [Cucumis sativus] >KGN45689.1 hypothetical protein Csa_6G006750 [Cucumis sativus])

HSP 1 Score: 510.4 bits (1313), Expect = 3.6e-141
Identity = 256/258 (99.22%), Postives = 257/258 (99.61%), Query Frame = 0 

Query: 1   MWSFRVAVDDMKVLIDSLITLGLVDVMADAIFSPDMFCILADSDVSLQSAFGLQLWPPFF 60
           MWSFRVAVDDMKVLIDSLITLGLVDVMADAIFSPDMFCILADSDVSLQSAFGLQLWPPFF
Sbjct: 1   MWSFRVAVDDMKVLIDSLITLGLVDVMADAIFSPDMFCILADSDVSLQSAFGLQLWPPFF 60

Query: 61  DSFYSDNLRQIFWFRLTHLFPLAVELLESGYTSLTFSIERFRHNYAQFKFEGPNGLLREV 120
           DSFYSDNLRQIFWFRLTHLFPLA+ELLESG TSLTFSIERFRHNYAQFKFEGPNGLLREV
Sbjct: 61  DSFYSDNLRQIFWFRLTHLFPLALELLESGCTSLTFSIERFRHNYAQFKFEGPNGLLREV 120

Query: 121 NFRLTPIVRPLRIGQIDLSAFVTMDSQEFSYIISQYNMFDYVEVIITSRRVSFSSSTIQE 180
           NFRLTPIVRPLRIGQIDLSAFVTMDSQEFSYIISQYNMFDYVEVIITSRRVSFSSSTIQE
Sbjct: 121 NFRLTPIVRPLRIGQIDLSAFVTMDSQEFSYIISQYNMFDYVEVIITSRRVSFSSSTIQE 180

Query: 181 TTISAEDGRCIVGGVRAPVQVQFIITMSQPNAFFHFASQSKRIWLFKEVNSTKGIITAPL 240
           TTISAEDGRCIVGGVRAPVQVQFIITMSQPNAFFHFASQSKRIWLFKEVNSTKGIITAPL
Sbjct: 181 TTISAEDGRCIVGGVRAPVQVQFIITMSQPNAFFHFASQSKRIWLFKEVNSTKGIITAPL 240

Query: 241 GLYGRLVSFFCDDSTLPM 259
           GLYGRLVSFFCDDSTLPM
Sbjct: 241 GLYGRLVSFFCDDSTLPM 258

[Close]
BLAST of CsaV3_6G000850 vs. NCBI nr
Match: KGN46521.1 (hypothetical protein Csa_6G106730 [Cucumis sativus])

HSP 1 Score: 459.5 bits (1181), Expect = 7.4e-126
Identity = 225/258 (87.21%), Postives = 244/258 (94.57%), Query Frame = 0 

Query: 1   MWSFRVAVDDMKVLIDSLITLGLVDVMADAIFSPDMFCILADSDVSLQSAFGLQLWPPFF 60
           MWSFRVAVDDMKVLIDSLITLGLVDVMADAIFSPD FCI+ADSD S+ SAFG+QLWPPFF
Sbjct: 1   MWSFRVAVDDMKVLIDSLITLGLVDVMADAIFSPDTFCIMADSDASIHSAFGVQLWPPFF 60

Query: 61  DSFYSDNLRQIFWFRLTHLFPLAVELLESGYTSLTFSIERFRHNYAQFKFEGPNGLLREV 120
           DSFYSD++RQ+FWFRLTHLF LAVELLESGYTSLTFSIERFR+NYAQFKFEGPNGLLR+V
Sbjct: 61  DSFYSDDIRQLFWFRLTHLFTLAVELLESGYTSLTFSIERFRYNYAQFKFEGPNGLLRDV 120

Query: 121 NFRLTPIVRPLRIGQIDLSAFVTMDSQEFSYIISQYNMFDYVEVIITSRRVSFSSSTIQE 180
           NF LTP+VRPLRIGQIDLSAFV+MDS+EFS IIS+Y+MFDYVEVIITSRRVSFS + IQE
Sbjct: 121 NFLLTPVVRPLRIGQIDLSAFVSMDSEEFSNIISEYHMFDYVEVIITSRRVSFSYAIIQE 180

Query: 181 TTISAEDGRCIVGGVRAPVQVQFIITMSQPNAFFHFASQSKRIWLFKEVNSTKGIITAPL 240
           T I+ EDG+C++GGVRAP QVQFIITMSQPNAFFHFASQSKRIWLFKEVNSTKGIITAPL
Sbjct: 181 TIITPEDGQCLIGGVRAPNQVQFIITMSQPNAFFHFASQSKRIWLFKEVNSTKGIITAPL 240

Query: 241 GLYGRLVSFFCDDSTLPM 259
           GLYGRLVSFFCD +  PM
Sbjct: 241 GLYGRLVSFFCDVTAFPM 258

[Close]
BLAST of CsaV3_6G000850 vs. NCBI nr
Match: XP_011658399.1 (PREDICTED: uncharacterized protein LOC105435987 [Cucumis sativus])

HSP 1 Score: 458.0 bits (1177), Expect = 2.1e-125
Identity = 224/258 (86.82%), Postives = 244/258 (94.57%), Query Frame = 0 

Query: 1   MWSFRVAVDDMKVLIDSLITLGLVDVMADAIFSPDMFCILADSDVSLQSAFGLQLWPPFF 60
           MWSFRVAVDDMKVLIDSLITLGLVDVMADAIFSPD FCI+ADSD S+ SAFG+QLWPPFF
Sbjct: 1   MWSFRVAVDDMKVLIDSLITLGLVDVMADAIFSPDTFCIMADSDASIHSAFGVQLWPPFF 60

Query: 61  DSFYSDNLRQIFWFRLTHLFPLAVELLESGYTSLTFSIERFRHNYAQFKFEGPNGLLREV 120
           DSFYSD++RQ+FWFRLTHLF LAVELLESGYTSLTFSIERFR+NYAQFKFEGPNGLLR+V
Sbjct: 61  DSFYSDDIRQLFWFRLTHLFTLAVELLESGYTSLTFSIERFRYNYAQFKFEGPNGLLRDV 120

Query: 121 NFRLTPIVRPLRIGQIDLSAFVTMDSQEFSYIISQYNMFDYVEVIITSRRVSFSSSTIQE 180
           NF LTP+VRPLRIGQIDLSAFV+MDS+EFS IIS+Y+MFDYVEVIITSRRVSFS + IQE
Sbjct: 121 NFLLTPVVRPLRIGQIDLSAFVSMDSEEFSNIISEYHMFDYVEVIITSRRVSFSYAIIQE 180

Query: 181 TTISAEDGRCIVGGVRAPVQVQFIITMSQPNAFFHFASQSKRIWLFKEVNSTKGIITAPL 240
           T I+ EDG+C++GGVRAP QVQFIITMSQPNAFFHFASQSKRIWLFKEVNSTKGIITAPL
Sbjct: 181 TIITPEDGQCLIGGVRAPNQVQFIITMSQPNAFFHFASQSKRIWLFKEVNSTKGIITAPL 240

Query: 241 GLYGRLVSFFCDDSTLPM 259
           GLYGRLVSFFCD +  P+
Sbjct: 241 GLYGRLVSFFCDVTAFPI 258

[Close]
BLAST of CsaV3_6G000850 vs. NCBI nr
Match: XP_008459734.1 (PREDICTED: uncharacterized protein LOC103498776 [Cucumis melo])

HSP 1 Score: 282.3 bits (721), Expect = 1.6e-72
Identity = 142/250 (56.80%), Postives = 180/250 (72.00%), Query Frame = 0 

Query: 3   SFRVAVDDMKVLIDSLITLGLVDVMADAIFSPDMFCILADSDVSLQSAFGLQLWPPFFDS 62
           SF   V++M+ LID+L TLG+ D +ADA FSP+MFC++ DS+VS+ S  GLQLWPPFFD 
Sbjct: 2   SFNFVVNNMQTLIDALATLGVADQLADATFSPEMFCVMVDSNVSIHSTIGLQLWPPFFDH 61

Query: 63  FYSDNLRQIFWFRLTHLFPLAVELLESGYTSLTFSIERFRHNYAQFKFEGPNGLLREVNF 122
           ++   L Q  WF    +FPLA +L +SGYTS +FSI     + AQ KF+GPNGLL E NF
Sbjct: 62  YFCSEL-QYSWFFFNEIFPLAQDLQDSGYTSFSFSIGP-NPDLAQIKFQGPNGLLHETNF 121

Query: 123 RLTPIVRPLRIGQIDLSAFVTMDSQEFSYIISQYNMFDYVEVIITSRRVSFSSSTIQETT 182
            L     PLRI   DLS FV+MDSQEFS +ISQY+MFD V V ITS RV FS S +QET 
Sbjct: 122 ELVYSHHPLRIPDFDLSVFVSMDSQEFSNVISQYHMFDDVHVTITSERVIFSYSIMQETI 181

Query: 183 ISAEDGRCIVGGVRAPVQVQFIITMSQPNAFFHFASQSKRIWLFKEVNSTKGIITAPLGL 242
           ++ ++G+CI+GG++AP QVQFI+T+     F H ASQ+KR+W FK+ NS KG+ITAPLGL
Sbjct: 182 LNQQNGQCIIGGIKAPNQVQFILTLGPSEVFNHIASQTKRVWFFKQCNSNKGLITAPLGL 241

Query: 243 YGRLVSFFCD 253
             RLV+ F D
Sbjct: 242 NSRLVACFFD 249

[Close]
BLAST of CsaV3_6G000850 vs. NCBI nr
Match: XP_004146827.2 (PREDICTED: uncharacterized protein LOC101206630 isoform X1 [Cucumis sativus] >KGN59826.1 hypothetical protein Csa_3G848840 [Cucumis sativus])

HSP 1 Score: 281.2 bits (718), Expect = 3.6e-72
Identity = 142/252 (56.35%), Postives = 184/252 (73.02%), Query Frame = 0 

Query: 1   MWSFRVAVDDMKVLIDSLITLGLVDVMADAIFSPDMFCILADSDVSLQSAFGLQLWPPFF 60
           M SF   V++M+ L+D+  TLGL D   DA FSP+MFC++ADS+VS+ SA GLQLWPPFF
Sbjct: 1   MSSFNFLVNNMRTLVDAFATLGLADHKGDATFSPEMFCLMADSNVSIHSAIGLQLWPPFF 60

Query: 61  DSFYSDNLRQIFWFRLTHLFPLAVELLESGYTSLTFSIERFRHNYAQFKFEGPNGLLREV 120
           D ++  +L+   WF  + +FPLA  L + GYTS +FSI R  H +AQ +F+GP  LL EV
Sbjct: 61  DHYFCRDLKN-SWFFFSEIFPLAQYLKDFGYTSFSFSIGRDPH-HAQIEFQGPTRLLLEV 120

Query: 121 NFRLTPIVRPLRIGQIDLSAFVTMDSQEFSYIISQYNMFDYVEVIITSRRVSFSSSTIQE 180
             RL     PLRI Q DLS FV+MDSQ+FS +ISQY+MFD V V ITS RV FS ST+QE
Sbjct: 121 TLRLVFCHLPLRIHQFDLSVFVSMDSQQFSNLISQYHMFDDVHVTITSERVIFSYSTMQE 180

Query: 181 TTISAEDGRCIVGGVRAPVQVQFIITMSQPNAFFHFASQSKRIWLFKEVNSTKGIITAPL 240
           T +S ++G+CI+GG+RAP +V+F+IT+     F H ASQ+KR+W FK+ NS +G+ITAPL
Sbjct: 181 TILSPQNGQCIIGGLRAPDEVEFVITLGPQEVFNHIASQTKRVWFFKQCNSNRGLITAPL 240

Query: 241 GLYGRLVSFFCD 253
           GL  RLV+FFCD
Sbjct: 241 GLNARLVAFFCD 250

[Close]
BLAST of CsaV3_6G000850 vs. TrEMBL
Match: tr|A0A0A0KA18|A0A0A0KA18_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G006750 PE=4 SV=1)

HSP 1 Score: 510.4 bits (1313), Expect = 2.4e-141
Identity = 256/258 (99.22%), Postives = 257/258 (99.61%), Query Frame = 0 

Query: 1   MWSFRVAVDDMKVLIDSLITLGLVDVMADAIFSPDMFCILADSDVSLQSAFGLQLWPPFF 60
           MWSFRVAVDDMKVLIDSLITLGLVDVMADAIFSPDMFCILADSDVSLQSAFGLQLWPPFF
Sbjct: 1   MWSFRVAVDDMKVLIDSLITLGLVDVMADAIFSPDMFCILADSDVSLQSAFGLQLWPPFF 60

Query: 61  DSFYSDNLRQIFWFRLTHLFPLAVELLESGYTSLTFSIERFRHNYAQFKFEGPNGLLREV 120
           DSFYSDNLRQIFWFRLTHLFPLA+ELLESG TSLTFSIERFRHNYAQFKFEGPNGLLREV
Sbjct: 61  DSFYSDNLRQIFWFRLTHLFPLALELLESGCTSLTFSIERFRHNYAQFKFEGPNGLLREV 120

Query: 121 NFRLTPIVRPLRIGQIDLSAFVTMDSQEFSYIISQYNMFDYVEVIITSRRVSFSSSTIQE 180
           NFRLTPIVRPLRIGQIDLSAFVTMDSQEFSYIISQYNMFDYVEVIITSRRVSFSSSTIQE
Sbjct: 121 NFRLTPIVRPLRIGQIDLSAFVTMDSQEFSYIISQYNMFDYVEVIITSRRVSFSSSTIQE 180

Query: 181 TTISAEDGRCIVGGVRAPVQVQFIITMSQPNAFFHFASQSKRIWLFKEVNSTKGIITAPL 240
           TTISAEDGRCIVGGVRAPVQVQFIITMSQPNAFFHFASQSKRIWLFKEVNSTKGIITAPL
Sbjct: 181 TTISAEDGRCIVGGVRAPVQVQFIITMSQPNAFFHFASQSKRIWLFKEVNSTKGIITAPL 240

Query: 241 GLYGRLVSFFCDDSTLPM 259
           GLYGRLVSFFCDDSTLPM
Sbjct: 241 GLYGRLVSFFCDDSTLPM 258

[Close]
BLAST of CsaV3_6G000850 vs. TrEMBL
Match: tr|A0A0A0KFM5|A0A0A0KFM5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G106730 PE=4 SV=1)

HSP 1 Score: 459.5 bits (1181), Expect = 4.9e-126
Identity = 225/258 (87.21%), Postives = 244/258 (94.57%), Query Frame = 0 

Query: 1   MWSFRVAVDDMKVLIDSLITLGLVDVMADAIFSPDMFCILADSDVSLQSAFGLQLWPPFF 60
           MWSFRVAVDDMKVLIDSLITLGLVDVMADAIFSPD FCI+ADSD S+ SAFG+QLWPPFF
Sbjct: 1   MWSFRVAVDDMKVLIDSLITLGLVDVMADAIFSPDTFCIMADSDASIHSAFGVQLWPPFF 60

Query: 61  DSFYSDNLRQIFWFRLTHLFPLAVELLESGYTSLTFSIERFRHNYAQFKFEGPNGLLREV 120
           DSFYSD++RQ+FWFRLTHLF LAVELLESGYTSLTFSIERFR+NYAQFKFEGPNGLLR+V
Sbjct: 61  DSFYSDDIRQLFWFRLTHLFTLAVELLESGYTSLTFSIERFRYNYAQFKFEGPNGLLRDV 120

Query: 121 NFRLTPIVRPLRIGQIDLSAFVTMDSQEFSYIISQYNMFDYVEVIITSRRVSFSSSTIQE 180
           NF LTP+VRPLRIGQIDLSAFV+MDS+EFS IIS+Y+MFDYVEVIITSRRVSFS + IQE
Sbjct: 121 NFLLTPVVRPLRIGQIDLSAFVSMDSEEFSNIISEYHMFDYVEVIITSRRVSFSYAIIQE 180

Query: 181 TTISAEDGRCIVGGVRAPVQVQFIITMSQPNAFFHFASQSKRIWLFKEVNSTKGIITAPL 240
           T I+ EDG+C++GGVRAP QVQFIITMSQPNAFFHFASQSKRIWLFKEVNSTKGIITAPL
Sbjct: 181 TIITPEDGQCLIGGVRAPNQVQFIITMSQPNAFFHFASQSKRIWLFKEVNSTKGIITAPL 240

Query: 241 GLYGRLVSFFCDDSTLPM 259
           GLYGRLVSFFCD +  PM
Sbjct: 241 GLYGRLVSFFCDVTAFPM 258

[Close]
BLAST of CsaV3_6G000850 vs. TrEMBL
Match: tr|A0A1S3CBB9|A0A1S3CBB9_CUCME (uncharacterized protein LOC103498776 OS=Cucumis melo OX=3656 GN=LOC103498776 PE=4 SV=1)

HSP 1 Score: 282.3 bits (721), Expect = 1.1e-72
Identity = 142/250 (56.80%), Postives = 180/250 (72.00%), Query Frame = 0 

Query: 3   SFRVAVDDMKVLIDSLITLGLVDVMADAIFSPDMFCILADSDVSLQSAFGLQLWPPFFDS 62
           SF   V++M+ LID+L TLG+ D +ADA FSP+MFC++ DS+VS+ S  GLQLWPPFFD 
Sbjct: 2   SFNFVVNNMQTLIDALATLGVADQLADATFSPEMFCVMVDSNVSIHSTIGLQLWPPFFDH 61

Query: 63  FYSDNLRQIFWFRLTHLFPLAVELLESGYTSLTFSIERFRHNYAQFKFEGPNGLLREVNF 122
           ++   L Q  WF    +FPLA +L +SGYTS +FSI     + AQ KF+GPNGLL E NF
Sbjct: 62  YFCSEL-QYSWFFFNEIFPLAQDLQDSGYTSFSFSIGP-NPDLAQIKFQGPNGLLHETNF 121

Query: 123 RLTPIVRPLRIGQIDLSAFVTMDSQEFSYIISQYNMFDYVEVIITSRRVSFSSSTIQETT 182
            L     PLRI   DLS FV+MDSQEFS +ISQY+MFD V V ITS RV FS S +QET 
Sbjct: 122 ELVYSHHPLRIPDFDLSVFVSMDSQEFSNVISQYHMFDDVHVTITSERVIFSYSIMQETI 181

Query: 183 ISAEDGRCIVGGVRAPVQVQFIITMSQPNAFFHFASQSKRIWLFKEVNSTKGIITAPLGL 242
           ++ ++G+CI+GG++AP QVQFI+T+     F H ASQ+KR+W FK+ NS KG+ITAPLGL
Sbjct: 182 LNQQNGQCIIGGIKAPNQVQFILTLGPSEVFNHIASQTKRVWFFKQCNSNKGLITAPLGL 241

Query: 243 YGRLVSFFCD 253
             RLV+ F D
Sbjct: 242 NSRLVACFFD 249

[Close]
BLAST of CsaV3_6G000850 vs. TrEMBL
Match: tr|A0A0A0LIF2|A0A0A0LIF2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G848840 PE=4 SV=1)

HSP 1 Score: 281.2 bits (718), Expect = 2.4e-72
Identity = 142/252 (56.35%), Postives = 184/252 (73.02%), Query Frame = 0 

Query: 1   MWSFRVAVDDMKVLIDSLITLGLVDVMADAIFSPDMFCILADSDVSLQSAFGLQLWPPFF 60
           M SF   V++M+ L+D+  TLGL D   DA FSP+MFC++ADS+VS+ SA GLQLWPPFF
Sbjct: 1   MSSFNFLVNNMRTLVDAFATLGLADHKGDATFSPEMFCLMADSNVSIHSAIGLQLWPPFF 60

Query: 61  DSFYSDNLRQIFWFRLTHLFPLAVELLESGYTSLTFSIERFRHNYAQFKFEGPNGLLREV 120
           D ++  +L+   WF  + +FPLA  L + GYTS +FSI R  H +AQ +F+GP  LL EV
Sbjct: 61  DHYFCRDLKN-SWFFFSEIFPLAQYLKDFGYTSFSFSIGRDPH-HAQIEFQGPTRLLLEV 120

Query: 121 NFRLTPIVRPLRIGQIDLSAFVTMDSQEFSYIISQYNMFDYVEVIITSRRVSFSSSTIQE 180
             RL     PLRI Q DLS FV+MDSQ+FS +ISQY+MFD V V ITS RV FS ST+QE
Sbjct: 121 TLRLVFCHLPLRIHQFDLSVFVSMDSQQFSNLISQYHMFDDVHVTITSERVIFSYSTMQE 180

Query: 181 TTISAEDGRCIVGGVRAPVQVQFIITMSQPNAFFHFASQSKRIWLFKEVNSTKGIITAPL 240
           T +S ++G+CI+GG+RAP +V+F+IT+     F H ASQ+KR+W FK+ NS +G+ITAPL
Sbjct: 181 TILSPQNGQCIIGGLRAPDEVEFVITLGPQEVFNHIASQTKRVWFFKQCNSNRGLITAPL 240

Query: 241 GLYGRLVSFFCD 253
           GL  RLV+FFCD
Sbjct: 241 GLNARLVAFFCD 250

[Close]
BLAST of CsaV3_6G000850 vs. TrEMBL
Match: tr|A0A0A0K7E0|A0A0A0K7E0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G002300 PE=4 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 1.9e-16
Identity = 70/245 (28.57%), Postives = 121/245 (49.39%), Query Frame = 0 

Query: 7   AVDDMKVLIDSLITLGLVDVMADAIFSPDMFCILADSDVSLQSAFGLQLWPPFFDSFYSD 66
           +++++   +D++  L      A+   SP MF ++     +L+     Q+ P FF+ F+S 
Sbjct: 3   SLENLDPFLDAIYILSRFGENANIECSPSMFSLIVPHH-NLELNVAFQMMPQFFNYFFS- 62

Query: 67  NLRQIFWFRLTHLFPLAVELLESGYTSLTFSIERFRHNYAQFKFEGPNGLLREV-NFRLT 126
           N        +  LF     + E   TSL+F + +        KF  P   L  +  FR+ 
Sbjct: 63  NRTHSSKIPIQPLFNTIKRMKEYQITSLSFFVLKLLDRLV-LKFSSPRNELPLIRKFRMR 122

Query: 127 PIVRPLRIGQIDLSAFVTMDSQEFSYIISQYNMFDYVEVIITSRRVSFSSSTIQETTISA 186
             V+   +G IDL  FV++DSQ+F  +++    + +V V  T   V FS+  I+E   + 
Sbjct: 123 CAVKE-DMGNIDLETFVSIDSQQFRRVVTGCRDY-FVRVTTTHSHVRFSNE-IKEFIFAR 182

Query: 187 EDGRCIVGGVRAPVQVQFIITMSQPNAFFHFASQSKRIWLFKEVNSTKGIITAPLGLYGR 246
           E G CI+ GV      +F+I +   + F++   ++KR+WLFK ++     I AP+GL+ R
Sbjct: 183 EGGECIMEGVGKGKGTEFLIPIYPTHVFYNITFRAKRVWLFKSIDKLGTFIVAPVGLFAR 241

Query: 247 LVSFF 251
            V +F
Sbjct: 243 FVIYF 241

The following BLAST results are available for this feature:
BLAST of CsaV3_6G000850 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004138491.23.6e-14199.22PREDICTED: uncharacterized protein LOC101219791 [Cucumis sativus] >KGN45689.1 hy... [more]
KGN46521.17.4e-12687.21hypothetical protein Csa_6G106730 [Cucumis sativus][more]
XP_011658399.12.1e-12586.82PREDICTED: uncharacterized protein LOC105435987 [Cucumis sativus][more]
XP_008459734.11.6e-7256.80PREDICTED: uncharacterized protein LOC103498776 [Cucumis melo][more]
XP_004146827.23.6e-7256.35PREDICTED: uncharacterized protein LOC101206630 isoform X1 [Cucumis sativus] >KG... [more]
BLAST of CsaV3_6G000850 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsaV3_6G000850 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsaV3_6G000850 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KA18|A0A0A0KA18_CUCSA2.4e-14199.22Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G006750 PE=4 SV=1[more]
tr|A0A0A0KFM5|A0A0A0KFM5_CUCSA4.9e-12687.21Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G106730 PE=4 SV=1[more]
tr|A0A1S3CBB9|A0A1S3CBB9_CUCME1.1e-7256.80uncharacterized protein LOC103498776 OS=Cucumis melo OX=3656 GN=LOC103498776 PE=... [more]
tr|A0A0A0LIF2|A0A0A0LIF2_CUCSA2.4e-7256.35Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G848840 PE=4 SV=1[more]
tr|A0A0A0K7E0|A0A0A0K7E0_CUCSA1.9e-1628.57Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G002300 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_6G000850.1CsaV3_6G000850.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3DG3DSA:3.70.10.10coord: 11..236
e-value: 3.6E-7
score: 31.9

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_6G000850CSPI06G00760Wild cucumber (PI 183967)cpicucB364
CsaV3_6G000850CsGy6G000830Cucumber (Gy14) v2cgybcucB298
CsaV3_6G000850Cla009196Watermelon (97103) v1cucwmB564
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_6G000850Cucumber (Chinese Long) v3cuccucB151
CsaV3_6G000850Cucumber (Chinese Long) v3cuccucB204
CsaV3_6G000850Silver-seed gourdcarcucB0637
CsaV3_6G000850Cucumber (Gy14) v2cgybcucB152
CsaV3_6G000850Cucumber (Gy14) v2cgybcucB243
CsaV3_6G000850Cucumber (Gy14) v1cgycucB203
CsaV3_6G000850Cucumber (Gy14) v1cgycucB471
CsaV3_6G000850Cucurbita maxima (Rimu)cmacucB0440
CsaV3_6G000850Cucurbita maxima (Rimu)cmacucB1073
CsaV3_6G000850Cucurbita moschata (Rifu)cmocucB0363
CsaV3_6G000850Cucurbita moschata (Rifu)cmocucB0432
CsaV3_6G000850Cucurbita moschata (Rifu)cmocucB1055
CsaV3_6G000850Cucurbita pepo (Zucchini)cpecucB0165
CsaV3_6G000850Cucurbita pepo (Zucchini)cpecucB0242
CsaV3_6G000850Cucurbita pepo (Zucchini)cpecucB0395
CsaV3_6G000850Wild cucumber (PI 183967)cpicucB189
CsaV3_6G000850Wild cucumber (PI 183967)cpicucB307
CsaV3_6G000850Bottle gourd (USVL1VR-Ls)cuclsiB418
CsaV3_6G000850Bottle gourd (USVL1VR-Ls)cuclsiB429
CsaV3_6G000850Melon (DHL92) v3.5.1cucmeB426
CsaV3_6G000850Melon (DHL92) v3.5.1cucmeB430
CsaV3_6G000850Melon (DHL92) v3.5.1cucmeB511
CsaV3_6G000850Melon (DHL92) v3.6.1cucmedB417
CsaV3_6G000850Melon (DHL92) v3.6.1cucmedB420
CsaV3_6G000850Melon (DHL92) v3.6.1cucmedB499
CsaV3_6G000850Watermelon (Charleston Gray)cucwcgB456
CsaV3_6G000850Watermelon (Charleston Gray)cucwcgB502
CsaV3_6G000850Watermelon (97103) v1cucwmB529
CsaV3_6G000850Watermelon (97103) v1cucwmB565
CsaV3_6G000850Watermelon (97103) v2cucwmbB431
CsaV3_6G000850Watermelon (97103) v2cucwmbB492
CsaV3_6G000850Wax gourdcucwgoB550
CsaV3_6G000850Wax gourdcucwgoB560