CsaV3_5G037250 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_5G037250
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	homeobox-leucine zipper protein HAT5-like
Location	chr5 : 29571581 .. 29574391 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ACCCGCTGATAACAACCTTCACAGGGTTTCATTTCAAGCAATCATTCTATTCTTTCTGCCGGGGACTCTGTTTTCCCGGTCGCCCCTGTTTCTGTTTTCGATCAACCGTCTGTATTCTCTCCTTTTCTCTTTTACTTCTTCATTTTCTTCCTTCATTCTTTACCTCTCATTCCAGCTTTTTCTTCTTTTTTCTCACACAGGTTTTCGAGACTGACGAAGAGCTGGGTAATAACAGAGCTGGTGGTGTGATGGGGTTTTGTATTTCTCCATTGGGAACACCGGCTAGGTTACTTTGGAGCACCAGTTTCTTCCGTCACAAGCTTATGATTTTCTAATTTCAGCCCTACAAGCTGAAAATACCAAACTCCATCTATTTCCTTTCTCGTTTTAATAAAGATCTACCCCGATTACGTCTCGGCTGTGACCAATCCCCCGCCCCCGTAAATCGCCGGTGATCCCTTCTTAACGATTTCCGTTTCAGATTTTCAAGAATAATTAATGATGTCGGACGCTTTGATCTTCAACCGGTCTCCAGGTCATGCCAACATGTTGTTTTTCGGAAGTAGTGATTCCATTCCTCGTGGTAATTTTTATGCTTTTTTCATTTCAATGATCATCTTTAACTACTATTTCCATTCCATCCATCTTCTAACTGTGTTTCTGCTAATGGTAGGACCAAGTTTCATGATGGGGATGGAGGAAACTTCAAAGAGGCGCTCATTTTTCAGCTCTCCGGATGACTTGTTTGATGATGATTACTATGATGACCAGCCACCTGAGAAGAAGCGCCGGCTGACTCAAGAGCAGGTATTTGAGTAATCCTATTTTGATAATACCCTGCATTTGTTTTCACTTGGTGGGTGTGGAATCTAAACCCTGAACTCGATGCATTTTACTTGTGGGCATATTTCTTATATTCAATCTATGTTGTTGCTTTTAATGTTATTACCTTTGAATCAATGCTGGTCTCCTTGCTTATCTCTCTTGGTGAAAAGAAAAAGAATGGCATAATTCTCAGATTCTGTAAGATAAATACTAAAGGAAAATTCCCATGGGGGAATTATTTACATGACTGATATGGATTCTGTTTATAATGACTTTCTAAGTGCAAAGAAATTTCAAACCTACCCATGACTGGGTGCAATTCATCAAGTTCACCCTGGAATTATATTTTGTTTTTCATTTCTTTTATTGTACTTATTGTTCATCCTCCAATGTTCTCATTTCTTGATAATAAATAAGGTTGAAGAAAAAAAAAATGATTTGACAATCTACGCTGCTGAATGACCCTTATTAATTCATGGCCAATGATTAGGTGCATCTGCTGGAGATTAGCTTTGAGTCAGAGAACAAACTGGAGCCAGAGCGCAAGACTGAGCTAGCAAAGAAGCTGGGTCTGCAGCCAAGGCAAGTGGCTGTGTGGTTTCAGAACCGCCGAGCTAGATGGAAGACAAAGCAGCTTGAAAGGGACTATGATCTTCTCAAATCTTCATATGATTCTTTTCGTTCTAGCTACGACTTTATTGCTAAGGAGAATGAAAGGCTAAAAGCCGAGGTATCTATGCCCACTGAAAGCTATATAGTTTGCACTTTAGCAATTTGGTTTTATAGTGAAGATTCTCCCTTTGCTCAAAATCTTTCATTATTATTTTCATTAGCCTTTTGATATGCTATGCTAAGTCTTATAGATGCAGAAAGCTCAAATATTTCCTGATATTTGCTTGCTTGGCTGTCTTTGATGTGACATATCTTCTGGGAATAAATTCAAGTAGAAACAGATTTCTTTGTAAATCTTTAGGATGGCGGTCGGTGGACCATTTATCTTAGTTTCCTAAGGCGACTCAAGTAATTTCTAGTTAATCTAGTTACAAGTTTCATCGTCACATTTAGTCTAACGACGTCTTGTAAACTCGTGGCCCTACAATCAAATTGGATATAGATTAGTTTTCCAGATATGATTGGAATCTTAGGAAAAAGAATGGTGAAATTAGTTAAAAAAGGGACTTGGTATTGTTACTGATCCAGAGGTCTCTTGTGCCTTCTCAATTACTGAACTCAGGTAGCTTCTTTAACTGAGAAACTTCAAGCTAAAGAAGTGGTTGAATCATCGTTTCACGCTAAGAATCCTGATCCGTTTCTGGAGGATCAACTCCTTGTTCCTGTTGTGCAACAGAGCATTAAGATTGAAGACCACCATAGTTGCAGGAGCAATGGAAGCGCTGTGCTGGACGAGGACGGTCCTCATCTCCTGGACAGTGGGGATTCATACATCTTGAGCAATGACTATGATGGCTGTGTTTTGCCAACTTTTGGCGTGAACTCGGAGGAGGAAGATGTGAGTGACGACGGTCAGGGTTACTTCTCGGACGTTTATACGACAGTCGATCAGCAGACTCACGAGGGAGAGCCTCTGACCTGGTGGGACTGGACGTCGTAAATGTGCATTTGAAGCATCTCAATATTTAGTAGGATGGAAGTATAATATAAAGTTGACTGTATGATACAAATGAATAAACGTAGTGTGAACATTACTTAGTTTGGAATGAATGTATGTGTATGGATGAAACTTAGGACCTTGAACTGTTACATTGTTATTTTGTTGTTTACGTGAATTTACCCTTGAAAAGTTGGGGGCACTCTACCACTCGCAAACTTGTAAGAATCATTCTAATTTTGAAAATAATGTTTGGGATCGGAATGTTTTCAGACATCCGCAACTAATTTCTATGACTTTGTATCATTCATACAATCTATTAAACTTGTAATTAATTCTGTATGATTCGAGACCGAACAGAAAAACCTTTGTTTTAG

mRNA sequence

ATGATGTCGGACGCTTTGATCTTCAACCGGTCTCCAGGTCATGCCAACATGTTGTTTTTCGGAAGTAGTGATTCCATTCCTCGTGGACCAAGTTTCATGATGGGGATGGAGGAAACTTCAAAGAGGCGCTCATTTTTCAGCTCTCCGGATGACTTGTTTGATGATGATTACTATGATGACCAGCCACCTGAGAAGAAGCGCCGGCTGACTCAAGAGCAGGTGCATCTGCTGGAGATTAGCTTTGAGTCAGAGAACAAACTGGAGCCAGAGCGCAAGACTGAGCTAGCAAAGAAGCTGGGTCTGCAGCCAAGGCAAGTGGCTGTGTGGTTTCAGAACCGCCGAGCTAGATGGAAGACAAAGCAGCTTGAAAGGGACTATGATCTTCTCAAATCTTCATATGATTCTTTTCGTTCTAGCTACGACTTTATTGCTAAGGAGAATGAAAGGCTAAAAGCCGAGGTAGCTTCTTTAACTGAGAAACTTCAAGCTAAAGAAGTGGTTGAATCATCGTTTCACGCTAAGAATCCTGATCCGTTTCTGGAGGATCAACTCCTTGTTCCTGTTGTGCAACAGAGCATTAAGATTGAAGACCACCATAGTTGCAGGAGCAATGGAAGCGCTGTGCTGGACGAGGACGGTCCTCATCTCCTGGACAGTGGGGATTCATACATCTTGAGCAATGACTATGATGGCTGTGTTTTGCCAACTTTTGGCGTGAACTCGGAGGAGGAAGATGTGAGTGACGACGGTCAGGGTTACTTCTCGGACGTTTATACGACAGTCGATCAGCAGACTCACGAGGGAGAGCCTCTGACCTGGTGGGACTGGACGTCGTAA

Coding sequence (CDS)

ATGATGTCGGACGCTTTGATCTTCAACCGGTCTCCAGGTCATGCCAACATGTTGTTTTTCGGAAGTAGTGATTCCATTCCTCGTGGACCAAGTTTCATGATGGGGATGGAGGAAACTTCAAAGAGGCGCTCATTTTTCAGCTCTCCGGATGACTTGTTTGATGATGATTACTATGATGACCAGCCACCTGAGAAGAAGCGCCGGCTGACTCAAGAGCAGGTGCATCTGCTGGAGATTAGCTTTGAGTCAGAGAACAAACTGGAGCCAGAGCGCAAGACTGAGCTAGCAAAGAAGCTGGGTCTGCAGCCAAGGCAAGTGGCTGTGTGGTTTCAGAACCGCCGAGCTAGATGGAAGACAAAGCAGCTTGAAAGGGACTATGATCTTCTCAAATCTTCATATGATTCTTTTCGTTCTAGCTACGACTTTATTGCTAAGGAGAATGAAAGGCTAAAAGCCGAGGTAGCTTCTTTAACTGAGAAACTTCAAGCTAAAGAAGTGGTTGAATCATCGTTTCACGCTAAGAATCCTGATCCGTTTCTGGAGGATCAACTCCTTGTTCCTGTTGTGCAACAGAGCATTAAGATTGAAGACCACCATAGTTGCAGGAGCAATGGAAGCGCTGTGCTGGACGAGGACGGTCCTCATCTCCTGGACAGTGGGGATTCATACATCTTGAGCAATGACTATGATGGCTGTGTTTTGCCAACTTTTGGCGTGAACTCGGAGGAGGAAGATGTGAGTGACGACGGTCAGGGTTACTTCTCGGACGTTTATACGACAGTCGATCAGCAGACTCACGAGGGAGAGCCTCTGACCTGGTGGGACTGGACGTCGTAA

Protein sequence

MMSDALIFNRSPGHANMLFFGSSDSIPRGPSFMMGMEETSKRRSFFSSPDDLFDDDYYDDQPPEKKRRLTQEQVHLLEISFESENKLEPERKTELAKKLGLQPRQVAVWFQNRRARWKTKQLERDYDLLKSSYDSFRSSYDFIAKENERLKAEVASLTEKLQAKEVVESSFHAKNPDPFLEDQLLVPVVQQSIKIEDHHSCRSNGSAVLDEDGPHLLDSGDSYILSNDYDGCVLPTFGVNSEEEDVSDDGQGYFSDVYTTVDQQTHEGEPLTWWDWTS

Homology

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BLAST of CsaV3_5G037250 vs. NCBI nr
Match: XP_004142356.2 (PREDICTED: homeobox-leucine zipper protein HAT5-like [Cucumis sativus])

HSP 1 Score: 442.2 bits (1136), Expect = 1.3e-120
Identity = 278/278 (100.00%), Postives = 278/278 (100.00%), Query Frame = 0


Query: 1   MMSDALIFNRSPGHANMLFFGSSDSIPRGPSFMMGMEXXXXXXXXXXXXXXXXXXXXXXX 60
           MMSDALIFNRSPGHANMLFFGSSDSIPRGPSFMMGMEXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 1   MMSDALIFNRSPGHANMLFFGSSDSIPRGPSFMMGMEXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXEQVHLLEISFESENKLEPERKTELAKKLGLQPRQVAVWFQNRRARWKTK 120
           XXXXXXXXXXXEQVHLLEISFESENKLEPERKTELAKKLGLQPRQVAVWFQNRRARWKTK
Sbjct: 61  XXXXXXXXXXXEQVHLLEISFESENKLEPERKTELAKKLGLQPRQVAVWFQNRRARWKTK 120

Query: 121 QLERDYDLXXXXXXXXXXXXXXXXXENERLKAEVASLTEKLQAKEVVESSFHAKNPDPFL 180
           QLERDYDLXXXXXXXXXXXXXXXXXENERLKAEVASLTEKLQAKEVVESSFHAKNPDPFL
Sbjct: 121 QLERDYDLXXXXXXXXXXXXXXXXXENERLKAEVASLTEKLQAKEVVESSFHAKNPDPFL 180

Query: 181 EDQLLVPVVQQSIKIEDHHSCRSNGSAVLDEDGPHLLDSGDSYILSNDYDGCVLPTFGVN 240
           EDQLLVPVVQQSIKIEDHHSCRSNGSAVLDEDGPHLLDSGDSYILSNDYDGCVLPTFGVN
Sbjct: 181 EDQLLVPVVQQSIKIEDHHSCRSNGSAVLDEDGPHLLDSGDSYILSNDYDGCVLPTFGVN 240

Query: 241 SEEEDVSDDGQGYFSDVYTTVDQQTHEGEPLTWWDWTS 279
           SEEEDVSDDGQGYFSDVYTTVDQQTHEGEPLTWWDWTS
Sbjct: 241 SEEEDVSDDGQGYFSDVYTTVDQQTHEGEPLTWWDWTS 278

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BLAST of CsaV3_5G037250 vs. NCBI nr
Match: XP_008458752.1 (PREDICTED: homeobox-leucine zipper protein HAT5-like [Cucumis melo])

HSP 1 Score: 429.9 bits (1104), Expect = 6.7e-117
Identity = 272/278 (97.84%), Postives = 273/278 (98.20%), Query Frame = 0


Query: 1   MMSDALIFNRSPGHANMLFFGSSDSIPRGPSFMMGMEXXXXXXXXXXXXXXXXXXXXXXX 60
           MMSD LIFNRSPGHANMLFFGSSD IPRGPSFMMGMEXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 1   MMSDGLIFNRSPGHANMLFFGSSDPIPRGPSFMMGMEXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXEQVHLLEISFESENKLEPERKTELAKKLGLQPRQVAVWFQNRRARWKTK 120
           XXXXXXXXXXXEQVHLLEISFESENKLEPERKTELAKKLGLQPRQVAVWFQNRRARWKTK
Sbjct: 61  XXXXXXXXXXXEQVHLLEISFESENKLEPERKTELAKKLGLQPRQVAVWFQNRRARWKTK 120

Query: 121 QLERDYDLXXXXXXXXXXXXXXXXXENERLKAEVASLTEKLQAKEVVESSFHAKNPDPFL 180
           QLERDYDLXXXXXXXXXXXXXXXXXENERLKAEVASLTEKLQAKEVVESSFHAKNPDPFL
Sbjct: 121 QLERDYDLXXXXXXXXXXXXXXXXXENERLKAEVASLTEKLQAKEVVESSFHAKNPDPFL 180

Query: 181 EDQLLVPVVQQSIKIEDHHSCRSNGSAVLDEDGPHLLDSGDSYILSNDYDGCVLPTFGVN 240
           EDQLLVPVVQQ+IKIEDHHSCRSNGSAVLDEDGP LLDSGDSYILSNDYDGCVLP FGVN
Sbjct: 181 EDQLLVPVVQQNIKIEDHHSCRSNGSAVLDEDGPQLLDSGDSYILSNDYDGCVLPAFGVN 240

Query: 241 SEEEDVSDDGQGYFSDVYTTVDQQTHEGEPLTWWDWTS 279
           SEEED SDDGQGYFSDVYTTVDQQTHEGEPLTWWDWTS
Sbjct: 241 SEEEDGSDDGQGYFSDVYTTVDQQTHEGEPLTWWDWTS 278

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BLAST of CsaV3_5G037250 vs. NCBI nr
Match: XP_022938616.1 (homeobox-leucine zipper protein HAT5-like [Cucurbita moschata])

HSP 1 Score: 384.8 bits (987), Expect = 2.5e-103
Identity = 244/277 (88.09%), Postives = 251/277 (90.61%), Query Frame = 0


Query: 1   MMSDALIFNRSPGHANMLFFGSSDSIPRGPSFMMGMEXXXXXXXXXXXXXXXXXXXXXXX 60
           MMSD LIFNRSPGHANMLFFGS DSI RG  F  GME     XXXXXXXXXXXXXXXXXX
Sbjct: 1   MMSDGLIFNRSPGHANMLFFGSGDSILRGSCFTKGME-ENSKXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXEQVHLLEISFESENKLEPERKTELAKKLGLQPRQVAVWFQNRRARWKTK 120
           XXXXXXXXXX EQVHLLEISFE+ENKLEPERKTELAKKLGLQPRQVAVWFQNRRARWKTK
Sbjct: 61  XXXXXXXXXXQEQVHLLEISFEAENKLEPERKTELAKKLGLQPRQVAVWFQNRRARWKTK 120

Query: 121 QLERDYDLXXXXXXXXXXXXXXXXXENERLKAEVASLTEKLQAKEVVESSFHAKNPDPFL 180
           QLERDYDL XXXXXXXXXXXXXXX ENERLKAEVASLTEKLQAKEVVESSF AK  +P L
Sbjct: 121 QLERDYDLLXXXXXXXXXXXXXXXKENERLKAEVASLTEKLQAKEVVESSFQAKKSEPIL 180

Query: 181 EDQLLVPVVQQSIKIEDHHSCRSNGSAVLDEDGPHLLDSGDSYILSNDYDGCVLPTFGVN 240
           EDQLLV VVQ ++KI+DHHSCRSNGSAVLDEDGP LLDSGDSY+LSNDYDGCVLP FGVN
Sbjct: 181 EDQLLVSVVQHNMKIDDHHSCRSNGSAVLDEDGPQLLDSGDSYLLSNDYDGCVLPVFGVN 240

Query: 241 SEEEDVSDDGQGYFSDVYTTVDQQTHEGEPLTWWDWT 278
           SEEEDVSDDGQGYFSDVYT  DQQTHE EPLTWWDW+
Sbjct: 241 SEEEDVSDDGQGYFSDVYTAADQQTHEAEPLTWWDWS 276

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BLAST of CsaV3_5G037250 vs. NCBI nr
Match: XP_022959838.1 (homeobox-leucine zipper protein HAT5-like [Cucurbita moschata])

HSP 1 Score: 383.3 bits (983), Expect = 7.2e-103
Identity = 243/277 (87.73%), Postives = 255/277 (92.06%), Query Frame = 0


Query: 2   MSDALIFNRSPGHANMLFFGSSDSIPRGPSFMMGMEXXXXXXXXXXXXXXXXXXXXXXXX 61
           M+D LIFNRSPGH+NMLFFGS DS+ RGP F MGME  XXXXXXXXXXXXXXXXXXXXXX
Sbjct: 1   MTDGLIFNRSPGHSNMLFFGSGDSVLRGPRFAMGMEETXXXXXXXXXXXXXXXXXXXXXX 60

Query: 62  XXXXXXXXXXEQVHLLEISFESENKLEPERKTELAKKLGLQPRQVAVWFQNRRARWKTKQ 121
           XXXXXXXXXXEQVHLLEISFESENKLEPERKTELA KLGLQPRQVAVWFQNRRARWKTKQ
Sbjct: 61  XXXXXXXXXXEQVHLLEISFESENKLEPERKTELANKLGLQPRQVAVWFQNRRARWKTKQ 120

Query: 122 LERDYDLXXXXXXXXXXXXXXXXXENERLKAEVASLTEKLQAKEVVESSFHAKNPDPFLE 181
           LERDYDLXXXXXXXXXXXXXX   ENERLKAEVASL+EKL AKEVVESSF AK  +PFLE
Sbjct: 121 LERDYDLXXXXXXXXXXXXXXVVKENERLKAEVASLSEKLLAKEVVESSFQAKKSEPFLE 180

Query: 182 DQLLVPVVQQSIKIEDHHSCRSNGSAVLDEDGPHLLDSGDSYILSNDYDGCVLPTFGVNS 241
            Q+LVPVVQ S+KIEDHHSCRSNGSAVLDEDGPHLLDSGDSY+LSNDY+GCVLP FG+NS
Sbjct: 181 HQILVPVVQHSMKIEDHHSCRSNGSAVLDEDGPHLLDSGDSYLLSNDYNGCVLPVFGMNS 240

Query: 242 EEEDVSDDGQGYFSDVYTTVDQQTHEGEPLTWWDWTS 279
           EEED SDDGQGYFS +YTT DQQT+E EPLTWWDWTS
Sbjct: 241 EEEDGSDDGQGYFSAIYTTDDQQTNEVEPLTWWDWTS 277

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BLAST of CsaV3_5G037250 vs. NCBI nr
Match: XP_022993660.1 (homeobox-leucine zipper protein HAT5-like [Cucurbita maxima])

HSP 1 Score: 382.1 bits (980), Expect = 1.6e-102
Identity = 241/277 (87.00%), Postives = 251/277 (90.61%), Query Frame = 0


Query: 1   MMSDALIFNRSPGHANMLFFGSSDSIPRGPSFMMGMEXXXXXXXXXXXXXXXXXXXXXXX 60
           M+SD LIFNRSPGHANMLFFGS DSI RG  F  GME     XXXXXXXXXXXXXXXXXX
Sbjct: 1   MLSDGLIFNRSPGHANMLFFGSGDSILRGSCFTKGME-ENSKXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXEQVHLLEISFESENKLEPERKTELAKKLGLQPRQVAVWFQNRRARWKTK 120
           XXXXXXXXXX EQVHLLEISFE+ENKLEPERKTELAKKLGLQPRQVA+WFQNRRARWKTK
Sbjct: 61  XXXXXXXXXXQEQVHLLEISFEAENKLEPERKTELAKKLGLQPRQVAIWFQNRRARWKTK 120

Query: 121 QLERDYDLXXXXXXXXXXXXXXXXXENERLKAEVASLTEKLQAKEVVESSFHAKNPDPFL 180
           QLERDYDL XXXXXXXXXXXXXXX ENERLKAEVASLTEKLQAKEVVESSF AK  +P L
Sbjct: 121 QLERDYDLLXXXXXXXXXXXXXXXKENERLKAEVASLTEKLQAKEVVESSFQAKKSEPIL 180

Query: 181 EDQLLVPVVQQSIKIEDHHSCRSNGSAVLDEDGPHLLDSGDSYILSNDYDGCVLPTFGVN 240
           ED+LLV VVQ ++KI+DHHSCRSNGSAVLDEDGP LLDSGDSY+LSNDYDGCVLP FGVN
Sbjct: 181 EDELLVSVVQHNMKIDDHHSCRSNGSAVLDEDGPQLLDSGDSYLLSNDYDGCVLPVFGVN 240

Query: 241 SEEEDVSDDGQGYFSDVYTTVDQQTHEGEPLTWWDWT 278
           SEEEDVSDDGQGYFSDVYT  DQQTHE EPLTWWDW+
Sbjct: 241 SEEEDVSDDGQGYFSDVYTAADQQTHEAEPLTWWDWS 276

[Close]

BLAST of CsaV3_5G037250 vs. TAIR10
Match: AT3G01470.1 (homeobox 1)

HSP 1 Score: 160.6 bits (405), Expect = 1.4e-39
Identity = 119/207 (57.49%), Postives = 136/207 (65.70%), Query Frame = 0


Query: 72  EQVHLLEISFESENKLEPERKTELAKKLGLQPRQVAVWFQNRRARWKTKQLERDYDLXXX 131
           EQVHLLE SFE+ENKLEPERKT+LAKKLGLQPRQVAVWFQNRRARWKTKQLERDYDLXXX
Sbjct: 75  EQVHLLEKSFETENKLEPERKTQLAKKLGLQPRQVAVWFQNRRARWKTKQLERDYDLXXX 134

Query: 132 XXXXXXXXXXXXXXENERLKAEVASLTEKLQAKEVVESSFHAKNPDPFLEDQLLVPVVQQ 191
           XXXXXXXXXXXXXX           LTEKLQ K+   +    + P+P   D + +     
Sbjct: 135 XXXXXXXXXXXXXXXXXXXXXXXXXLTEKLQGKQETANEPPGQVPEPNQLDPVYINAA-- 194

Query: 192 SIKIEDHHSCRSNGSAVLDEDGPHLLDSGDSYILSNDYDGCVLPTFGVNSEEEDVSDDGQ 251
           +IK ED  S  S GSAVLD+D P LLDS DSY  S      ++P    NS   D  D+ +
Sbjct: 195 AIKTEDRLSSGSVGSAVLDDDAPQLLDSCDSYFPS------IVP-IQDNSNASD-HDNDR 254

Query: 252 GYFSDVY--TTVDQQTHEGEPLTWWDW 277
             F+DV+  TT     H GE L +W W
Sbjct: 255 SCFADVFVPTTSPSHDHHGESLAFWGW 271

[Close]

BLAST of CsaV3_5G037250 vs. TAIR10
Match: AT5G15150.1 (homeobox 3)

HSP 1 Score: 95.5 bits (236), Expect = 5.5e-20
Identity = 46/56 (82.14%), Postives = 49/56 (87.50%), Query Frame = 0


Query: 72  EQVHLLEISFESENKLEPERKTELAKKLGLQPRQVAVWFQNRRARWKTKQLERDYD 128
           EQV  LE SFE  NKLEPERK +LAK LGLQPRQ+A+WFQNRRARWKTKQLERDYD
Sbjct: 122 EQVRALEKSFELGNKLEPERKMQLAKALGLQPRQIAIWFQNRRARWKTKQLERDYD 177

[Close]

BLAST of CsaV3_5G037250 vs. TAIR10
Match: AT4G40060.1 (homeobox protein 16)

HSP 1 Score: 94.0 bits (232), Expect = 1.6e-19
Identity = 45/55 (81.82%), Postives = 51/55 (92.73%), Query Frame = 0


Query: 72  EQVHLLEISFESENKLEPERKTELAKKLGLQPRQVAVWFQNRRARWKTKQLERDY 127
           +QV  LE +FE ENKLEPERKT+LA++LGLQPRQVAVWFQNRRARWKTKQLE+DY
Sbjct: 66  DQVKALEKNFELENKLEPERKTKLAQELGLQPRQVAVWFQNRRARWKTKQLEKDY 120

[Close]

BLAST of CsaV3_5G037250 vs. TAIR10
Match: AT3G01220.1 (homeobox protein 20)

HSP 1 Score: 93.2 bits (230), Expect = 2.7e-19
Identity = 44/56 (78.57%), Postives = 49/56 (87.50%), Query Frame = 0


Query: 72  EQVHLLEISFESENKLEPERKTELAKKLGLQPRQVAVWFQNRRARWKTKQLERDYD 128
           EQV  LE SFE  NKLEPERK +LAK LG+QPRQ+A+WFQNRRARWKT+QLERDYD
Sbjct: 94  EQVKALEKSFELGNKLEPERKIQLAKALGMQPRQIAIWFQNRRARWKTRQLERDYD 149

[Close]

BLAST of CsaV3_5G037250 vs. TAIR10
Match: AT5G65310.1 (homeobox protein 5)

HSP 1 Score: 92.8 bits (229), Expect = 3.5e-19
Identity = 44/55 (80.00%), Postives = 50/55 (90.91%), Query Frame = 0


Query: 72  EQVHLLEISFESENKLEPERKTELAKKLGLQPRQVAVWFQNRRARWKTKQLERDY 127
           EQV  LE +FE +NKLEPERK +LA++LGLQPRQVA+WFQNRRARWKTKQLERDY
Sbjct: 79  EQVKALEKNFEIDNKLEPERKVKLAQELGLQPRQVAIWFQNRRARWKTKQLERDY 133

[Close]

BLAST of CsaV3_5G037250 vs. Swiss-Prot
Match: sp|Q02283|HAT5_ARATH (Homeobox-leucine zipper protein HAT5 OS=Arabidopsis thaliana OX=3702 GN=HAT5 PE=1 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 2.5e-38
Identity = 119/207 (57.49%), Postives = 136/207 (65.70%), Query Frame = 0


Query: 72  EQVHLLEISFESENKLEPERKTELAKKLGLQPRQVAVWFQNRRARWKTKQLERDYDLXXX 131
           EQVHLLE SFE+ENKLEPERKT+LAKKLGLQPRQVAVWFQNRRARWKTKQLERDYDLXXX
Sbjct: 75  EQVHLLEKSFETENKLEPERKTQLAKKLGLQPRQVAVWFQNRRARWKTKQLERDYDLXXX 134

Query: 132 XXXXXXXXXXXXXXENERLKAEVASLTEKLQAKEVVESSFHAKNPDPFLEDQLLVPVVQQ 191
           XXXXXXXXXXXXXX           LTEKLQ K+   +    + P+P   D + +     
Sbjct: 135 XXXXXXXXXXXXXXXXXXXXXXXXXLTEKLQGKQETANEPPGQVPEPNQLDPVYINAA-- 194

Query: 192 SIKIEDHHSCRSNGSAVLDEDGPHLLDSGDSYILSNDYDGCVLPTFGVNSEEEDVSDDGQ 251
           +IK ED  S  S GSAVLD+D P LLDS DSY  S      ++P    NS   D  D+ +
Sbjct: 195 AIKTEDRLSSGSVGSAVLDDDAPQLLDSCDSYFPS------IVP-IQDNSNASD-HDNDR 254

Query: 252 GYFSDVY--TTVDQQTHEGEPLTWWDW 277
             F+DV+  TT     H GE L +W W
Sbjct: 255 SCFADVFVPTTSPSHDHHGESLAFWGW 271

[Close]

BLAST of CsaV3_5G037250 vs. Swiss-Prot
Match: sp|A2X980|HOX16_ORYSI (Homeobox-leucine zipper protein HOX16 OS=Oryza sativa subsp. indica OX=39946 GN=HOX16 PE=2 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 9.8e-27
Identity = 98/178 (55.06%), Postives = 114/178 (64.04%), Query Frame = 0


Query: 72  EQVHLLEISFESENKLEPERKTELAKKLGLQPRQVAVWFQNRRARWKTKQLERDYDLXXX 131
           EQVHLLE SFE ENKLEPERKTELA+KLGLQPRQVAVWFQNRRARWKTKQLERD+  XXX
Sbjct: 86  EQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWFQNRRARWKTKQLERDFXXXXX 145

Query: 132 XXXXXXXXXXXXXXENERLKAEVASLTEKLQAKE-VVESSFHAKNPDPFL----EDQLLV 191
           XXXXXXXXXXXXXX      ++V SLTEKLQ KE   E S  A    P L    + ++ V
Sbjct: 146 XXXXXXXXXXXXXXXXXXXHSQVMSLTEKLQEKETTTEGSAGAAVDVPGLPAAADVKVAV 205

Query: 192 PVVQQ----------------SIKIEDHHSCRSNGSAVLDEDGPHLLDSGDSYILSND 229
           P  ++                 +K ED  S  S GSAV+D D   ++  G  ++ + D
Sbjct: 206 PDAEEPALEXXXXXXXXXXXXXVKAEDRLSTGSGGSAVVDTDAQLVVGCGRQHLAAVD 263

[Close]

BLAST of CsaV3_5G037250 vs. Swiss-Prot
Match: sp|Q6YWR4|HOX16_ORYSJ (Homeobox-leucine zipper protein HOX16 OS=Oryza sativa subsp. japonica OX=39947 GN=HOX16 PE=2 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 9.8e-27
Identity = 98/178 (55.06%), Postives = 114/178 (64.04%), Query Frame = 0


Query: 72  EQVHLLEISFESENKLEPERKTELAKKLGLQPRQVAVWFQNRRARWKTKQLERDYDLXXX 131
           EQVHLLE SFE ENKLEPERKTELA+KLGLQPRQVAVWFQNRRARWKTKQLERD+  XXX
Sbjct: 84  EQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWFQNRRARWKTKQLERDFXXXXX 143

Query: 132 XXXXXXXXXXXXXXENERLKAEVASLTEKLQAKE-VVESSFHAKNPDPFL----EDQLLV 191
           XXXXXXXXXXXXXX      ++V SLTEKLQ KE   E S  A    P L    + ++ V
Sbjct: 144 XXXXXXXXXXXXXXXXXXXHSQVMSLTEKLQEKETTTEGSAGAAVDVPGLPAAADVKVAV 203

Query: 192 PVVQQ----------------SIKIEDHHSCRSNGSAVLDEDGPHLLDSGDSYILSND 229
           P  ++                 +K ED  S  S GSAV+D D   ++  G  ++ + D
Sbjct: 204 PDAEEPALEXXXXXXXXXXXXXVKAEDRLSTGSGGSAVVDTDAQLVVGCGRQHLAAVD 261

[Close]

BLAST of CsaV3_5G037250 vs. Swiss-Prot
Match: sp|Q9XH36|HOX5_ORYSI (Homeobox-leucine zipper protein HOX5 OS=Oryza sativa subsp. indica OX=39946 GN=HOX5 PE=1 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 4.6e-24
Identity = 75/99 (75.76%), Postives = 82/99 (82.83%), Query Frame = 0


Query: 72  EQVHLLEISFESENKLEPERKTELAKKLGLQPRQVAVWFQNRRARWKTKQLERDYDLXXX 131
           EQV +LE SFE ENKLEPERKTELA++LG+ PRQVAVWFQNRRARWKTKQLE D+D    
Sbjct: 93  EQVQMLERSFEEENKLEPERKTELARRLGMAPRQVAVWFQNRRARWKTKQLEHDFDRLKA 152

Query: 132 XXXXXXXXXXXXXXENERLKAEVASLTEKLQAKEVVESS 171
           XXXXXXXXXXXXXX   RL+A+V SLTEKLQ KE   SS
Sbjct: 153 XXXXXXXXXXXXXXXXXRLRAQVISLTEKLQDKETSPSS 191

[Close]

BLAST of CsaV3_5G037250 vs. Swiss-Prot
Match: sp|Q6ZA74|HOX5_ORYSJ (Homeobox-leucine zipper protein HOX5 OS=Oryza sativa subsp. japonica OX=39947 GN=HOX5 PE=1 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 4.6e-24
Identity = 75/99 (75.76%), Postives = 82/99 (82.83%), Query Frame = 0


Query: 72  EQVHLLEISFESENKLEPERKTELAKKLGLQPRQVAVWFQNRRARWKTKQLERDYDLXXX 131
           EQV +LE SFE ENKLEPERKTELA++LG+ PRQVAVWFQNRRARWKTKQLE D+D    
Sbjct: 93  EQVQMLERSFEEENKLEPERKTELARRLGMAPRQVAVWFQNRRARWKTKQLEHDFDRLKA 152

Query: 132 XXXXXXXXXXXXXXENERLKAEVASLTEKLQAKEVVESS 171
           XXXXXXXXXXXXXX   RL+A+V SLTEKLQ KE   SS
Sbjct: 153 XXXXXXXXXXXXXXXXXRLRAQVISLTEKLQDKETSPSS 191

[Close]

BLAST of CsaV3_5G037250 vs. TrEMBL
Match: tr|A0A1S3C9T9|A0A1S3C9T9_CUCME (homeobox-leucine zipper protein HAT5-like OS=Cucumis melo OX=3656 GN=LOC103498065 PE=4 SV=1)

HSP 1 Score: 429.9 bits (1104), Expect = 4.5e-117
Identity = 272/278 (97.84%), Postives = 273/278 (98.20%), Query Frame = 0


Query: 1   MMSDALIFNRSPGHANMLFFGSSDSIPRGPSFMMGMEXXXXXXXXXXXXXXXXXXXXXXX 60
           MMSD LIFNRSPGHANMLFFGSSD IPRGPSFMMGMEXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 1   MMSDGLIFNRSPGHANMLFFGSSDPIPRGPSFMMGMEXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXEQVHLLEISFESENKLEPERKTELAKKLGLQPRQVAVWFQNRRARWKTK 120
           XXXXXXXXXXXEQVHLLEISFESENKLEPERKTELAKKLGLQPRQVAVWFQNRRARWKTK
Sbjct: 61  XXXXXXXXXXXEQVHLLEISFESENKLEPERKTELAKKLGLQPRQVAVWFQNRRARWKTK 120

Query: 121 QLERDYDLXXXXXXXXXXXXXXXXXENERLKAEVASLTEKLQAKEVVESSFHAKNPDPFL 180
           QLERDYDLXXXXXXXXXXXXXXXXXENERLKAEVASLTEKLQAKEVVESSFHAKNPDPFL
Sbjct: 121 QLERDYDLXXXXXXXXXXXXXXXXXENERLKAEVASLTEKLQAKEVVESSFHAKNPDPFL 180

Query: 181 EDQLLVPVVQQSIKIEDHHSCRSNGSAVLDEDGPHLLDSGDSYILSNDYDGCVLPTFGVN 240
           EDQLLVPVVQQ+IKIEDHHSCRSNGSAVLDEDGP LLDSGDSYILSNDYDGCVLP FGVN
Sbjct: 181 EDQLLVPVVQQNIKIEDHHSCRSNGSAVLDEDGPQLLDSGDSYILSNDYDGCVLPAFGVN 240

Query: 241 SEEEDVSDDGQGYFSDVYTTVDQQTHEGEPLTWWDWTS 279
           SEEED SDDGQGYFSDVYTTVDQQTHEGEPLTWWDWTS
Sbjct: 241 SEEEDGSDDGQGYFSDVYTTVDQQTHEGEPLTWWDWTS 278

[Close]

BLAST of CsaV3_5G037250 vs. TrEMBL
Match: tr|A0A0A0KTX0|A0A0A0KTX0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G630820 PE=4 SV=1)

HSP 1 Score: 378.3 bits (970), Expect = 1.5e-101
Identity = 205/207 (99.03%), Postives = 206/207 (99.52%), Query Frame = 0


Query: 72  EQVHLLEISFESENKLEPERKTELAKKLGLQPRQVAVWFQNRRARWKTKQLERDYDLXXX 131
           + VHLLEISFESENKLEPERKTELAKKLGLQPRQVAVWFQNRRARWKTKQLERDYDLXXX
Sbjct: 5   DSVHLLEISFESENKLEPERKTELAKKLGLQPRQVAVWFQNRRARWKTKQLERDYDLXXX 64

Query: 132 XXXXXXXXXXXXXXENERLKAEVASLTEKLQAKEVVESSFHAKNPDPFLEDQLLVPVVQQ 191
           XXXXXXXXXXXXXXENERLKAEVASLTEKLQAKEVVESSFHAKNPDPFLEDQLLVPVVQQ
Sbjct: 65  XXXXXXXXXXXXXXENERLKAEVASLTEKLQAKEVVESSFHAKNPDPFLEDQLLVPVVQQ 124

Query: 192 SIKIEDHHSCRSNGSAVLDEDGPHLLDSGDSYILSNDYDGCVLPTFGVNSEEEDVSDDGQ 251
           SIKIEDHHSCRSNGSAVLDEDGPHLLDSGDSYILSNDYDGCVLPTFGVNSEEEDVSDDGQ
Sbjct: 125 SIKIEDHHSCRSNGSAVLDEDGPHLLDSGDSYILSNDYDGCVLPTFGVNSEEEDVSDDGQ 184

Query: 252 GYFSDVYTTVDQQTHEGEPLTWWDWTS 279
           GYFSDVYTTVDQQTHEGEPLTWWDWTS
Sbjct: 185 GYFSDVYTTVDQQTHEGEPLTWWDWTS 211

[Close]

BLAST of CsaV3_5G037250 vs. TrEMBL
Match: tr|A0A067LDR0|A0A067LDR0_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_09617 PE=4 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 8.0e-58
Identity = 146/282 (51.77%), Postives = 169/282 (59.93%), Query Frame = 0


Query: 1   MMSDALIFNRSPGHANMLFFGSSDSIPRGPSFMMGMEXXXXXXXXXXXXXXXXXXXXXXX 60
           M S  L FN S  H NMLF G+ D + RGP  ++ ME                       
Sbjct: 1   MESGRLFFNPSSCHENMLFLGNCDPVFRGPR-LLNMEDTYKKRPFFSSPEDLFDDDYYDE 60

Query: 61  XXXXXXXXXXXEQVHLLEISFESENKLEPERKTELAKKLGLQPRQVAVWFQNRRARWKTK 120
                      EQV+LLE SFE ENKLEP+RKT+LAKKLGLQPRQVAVWFQNRRARWKTK
Sbjct: 61  QLPEKKRRLTPEQVNLLEKSFEEENKLEPDRKTQLAKKLGLQPRQVAVWFQNRRARWKTK 120

Query: 121 QLERDYDLXXXXXXXXXXXXXXXXXENERLKAEVASLTEKLQAKEVVESSFHAKNPDPFL 180
           QLERDYDL          XXX    ENE+LK+EV  LTEKLQAKE+       +  D  L
Sbjct: 121 QLERDYDLLKASYESLLSXXXTIVKENEKLKSEVVGLTEKLQAKELTGLPMPGQKTDYSL 180

Query: 181 EDQLLVP---VVQQSIKIEDHHSCRSNGSAVLDEDGPHLLDSGDSYILSNDYDGCVLPTF 240
             Q+  P    +Q + K+ED  S  S GSAV+DED P LLDSGDS +  N   GCV+PT 
Sbjct: 181 --QVTTPNASGIQLNAKVEDRLSSGSAGSAVVDEDSPQLLDSGDS-VFHNYGGGCVIPTD 240

Query: 241 G-VNSEEEDVSDDGQGYFSDVYTTVDQQTHE-GEPLTWWDWT 278
           G V SE++D SDDG+GYFSDV+ T  QQ HE  EPL WW W+
Sbjct: 241 GTVQSEDDDGSDDGRGYFSDVFVTAGQQQHEVEEPLGWWVWS 278

[Close]

BLAST of CsaV3_5G037250 vs. TrEMBL
Match: tr|A0A061EJ86|A0A061EJ86_THECC (Homeobox-leucine zipper protein HAT5 OS=Theobroma cacao OX=3641 GN=TCM_016864 PE=4 SV=1)

HSP 1 Score: 230.7 bits (587), Expect = 4.0e-57
Identity = 151/278 (54.32%), Postives = 174/278 (62.59%), Query Frame = 0


Query: 1   MMSDALIFNRSPGHANMLFFGSSDSIPRGPSFMMGMEXXXXXXXXXXXXXXXXXXXXXXX 60
           M S  L FN S  H NMLF G+ D + RG   M+ ME                       
Sbjct: 1   MESGRLFFNSSTCHGNMLFLGNCDPVFRGARTMISMEETSKRRPFFSSPEDMYDEEYYDE 60

Query: 61  XXXXXXXXXXXEQVHLLEISFESENKLEPERKTELAKKLGLQPRQVAVWFQNRRARWKTK 120
                      EQVHLLE SFE+ENKLEPERKT+LAKKLGLQPRQVAVWFQNRRARWKTK
Sbjct: 61  QLPEKKRRLTAEQVHLLEKSFETENKLEPERKTQLAKKLGLQPRQVAVWFQNRRARWKTK 120

Query: 121 QLERDYDLXXXXXXXXXXXXXXXXXENERLKAEVASLTEKLQAKEVVESSFHAKNPDPFL 180
           QLERDYDLXXXXXXXXXXXXXXXXX         ASLTEKLQAK+        + P+P  
Sbjct: 121 QLERDYDLXXXXXXXXXXXXXXXXXXXXXXXXXXASLTEKLQAKDATTEPVIGQKPEPLP 180

Query: 181 EDQLLVPVVQQSIKIEDHHSCRSNGSAVLDEDGPHLLDSGDSYILSNDY-DGCVLPTFGV 240
            D  +V  +Q S+K+ED  S  S GSAV+DED P LLDSGDSY  S++Y  GCV P   +
Sbjct: 181 AD--IVSSLQFSVKVEDRQSTGSAGSAVVDEDAPQLLDSGDSYFPSDEYPGGCVGPVNRL 240

Query: 241 NSEEEDVSDDGQGYFSDVYTTVDQQTHEGEPLTWWDWT 278
            SEE+D SDDG+ YFS+V+T  ++Q    E L WW W+
Sbjct: 241 QSEEDDGSDDGRSYFSNVFTATEEQQQHEESLGWWVWS 276

[Close]

BLAST of CsaV3_5G037250 vs. TrEMBL
Match: tr|A0A1Q3BX37|A0A1Q3BX37_CEPFO (Homeobox domain-containing protein/HALZ domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_16048 PE=4 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 7.5e-56
Identity = 133/268 (49.63%), Postives = 158/268 (58.96%), Query Frame = 0


Query: 11  SPGHANMLFFGSSDSIPRGPSFMMGM-EXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 70
           S  H NMLF G+ D + +G   MM M E                                
Sbjct: 12  SASHGNMLFLGNGDPVFQGSRTMMNMEETSRRRPFLINTSDELMDEEYYDEQLPEKKRRL 71

Query: 71  XXEQVHLLEISFESENKLEPERKTELAKKLGLQPRQVAVWFQNRRARWKTKQLERDYDLX 130
             EQVH+LE SFE+ENKLEPERKT+LAKKLGLQPRQVAVWFQNRRARWKTKQLERDYDL 
Sbjct: 72  THEQVHMLEKSFEAENKLEPERKTQLAKKLGLQPRQVAVWFQNRRARWKTKQLERDYDLL 131

Query: 131 XXXXXXXXXXXXXXXXENERLKAEVASLTEKLQAKEVVESSFHAKNPDPFLEDQLLVPVV 190
                           ENE+L +EVASLTEKL AKEV      ++  +  LE+   V  +
Sbjct: 132 KSSFDSLHMNYETVVKENEKLISEVASLTEKLHAKEVKGELQLSEKSELLLEEMAHVSTL 191

Query: 191 QQSIKIEDHHSCRSNGSAVLDEDGPHLLDSGDSYILSNDYDGCVLPTFGVNSEEEDVSDD 250
           + + K+ED  S  S GSAV+DEDGP L+D GDSY  S +Y  CV  + GV   EED SDD
Sbjct: 192 EFNAKVEDRLSPGSGGSAVVDEDGPQLVDCGDSYFPSEEYPACV-GSIGVVQSEED-SDD 251

Query: 251 GQGYFSDVYTTVDQQTHEGEPLTWWDWT 278
           G+ YFSDV+   +QQ +EGE L WW W+
Sbjct: 252 GRSYFSDVFAAPEQQQNEGETLGWWVWS 277

The following BLAST results are available for this feature:

BLAST of CsaV3_5G037250 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004142356.2	1.3e-120	100.00	PREDICTED: homeobox-leucine zipper protein HAT5-like [Cucumis sativus]	[more]
XP_008458752.1	6.7e-117	97.84	PREDICTED: homeobox-leucine zipper protein HAT5-like [Cucumis melo]	[more]
XP_022938616.1	2.5e-103	88.09	homeobox-leucine zipper protein HAT5-like [Cucurbita moschata]	[more]
XP_022959838.1	7.2e-103	87.73	homeobox-leucine zipper protein HAT5-like [Cucurbita moschata]	[more]
XP_022993660.1	1.6e-102	87.00	homeobox-leucine zipper protein HAT5-like [Cucurbita maxima]	[more]

BLAST of CsaV3_5G037250 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G01470.1	1.4e-39	57.49	homeobox 1	[more]
AT5G15150.1	5.5e-20	82.14	homeobox 3	[more]
AT4G40060.1	1.6e-19	81.82	homeobox protein 16	[more]
AT3G01220.1	2.7e-19	78.57	homeobox protein 20	[more]
AT5G65310.1	3.5e-19	80.00	homeobox protein 5	[more]

BLAST of CsaV3_5G037250 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q02283\|HAT5_ARATH	2.5e-38	57.49	Homeobox-leucine zipper protein HAT5 OS=Arabidopsis thaliana OX=3702 GN=HAT5 PE=...	[more]
sp\|A2X980\|HOX16_ORYSI	9.8e-27	55.06	Homeobox-leucine zipper protein HOX16 OS=Oryza sativa subsp. indica OX=39946 GN=...	[more]
sp\|Q6YWR4\|HOX16_ORYSJ	9.8e-27	55.06	Homeobox-leucine zipper protein HOX16 OS=Oryza sativa subsp. japonica OX=39947 G...	[more]
sp\|Q9XH36\|HOX5_ORYSI	4.6e-24	75.76	Homeobox-leucine zipper protein HOX5 OS=Oryza sativa subsp. indica OX=39946 GN=H...	[more]
sp\|Q6ZA74\|HOX5_ORYSJ	4.6e-24	75.76	Homeobox-leucine zipper protein HOX5 OS=Oryza sativa subsp. japonica OX=39947 GN...	[more]

BLAST of CsaV3_5G037250 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3C9T9\|A0A1S3C9T9_CUCME	4.5e-117	97.84	homeobox-leucine zipper protein HAT5-like OS=Cucumis melo OX=3656 GN=LOC10349806...	[more]
tr\|A0A0A0KTX0\|A0A0A0KTX0_CUCSA	1.5e-101	99.03	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G630820 PE=4 SV=1	[more]
tr\|A0A067LDR0\|A0A067LDR0_JATCU	8.0e-58	51.77	Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_09617 PE=4 SV=1	[more]
tr\|A0A061EJ86\|A0A061EJ86_THECC	4.0e-57	54.32	Homeobox-leucine zipper protein HAT5 OS=Theobroma cacao OX=3641 GN=TCM_016864 PE...	[more]
tr\|A0A1Q3BX37\|A0A1Q3BX37_CEPFO	7.5e-56	49.63	Homeobox domain-containing protein/HALZ domain-containing protein OS=Cephalotus ...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0043565	sequence-specific DNA binding
GO:0003700	transcription factor activity, sequence-specific DNA binding
GO:0003677	DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **INTERPRO**
Term	Definition
IPR009057	Homeobox-like_sf
IPR017970	Homeobox_CS
IPR003106	Leu_zip_homeo
IPR001356	Homeobox_dom
IPR000047	HTH_motif

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0044699	single-organism process
biological_process	GO:0015996	chlorophyll catabolic process
biological_process	GO:0009965	leaf morphogenesis
biological_process	GO:0015706	nitrate transport
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
biological_process	GO:0010167	response to nitrate
biological_process	GO:0017148	negative regulation of translation
biological_process	GO:0009637	response to blue light
biological_process	GO:0009651	response to salt stress
cellular_component	GO:0005667	transcription factor complex
cellular_component	GO:0005634	nucleus
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding
molecular_function	GO:0042803	protein homodimerization activity
molecular_function	GO:0003677	DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_5G037250.1	CsaV3_5G037250.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 140..167
None	No IPR available	GENE3D	G3DSA:1.10.10.60		coord: 63..126 e-value: 1.5E-18 score: 68.1
None	No IPR available	PANTHER	PTHR24326	FAMILY NOT NAMED	coord: 24..259
None	No IPR available	PANTHER	PTHR24326:SF136	HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-54-RELATED	coord: 24..259
IPR000047	Helix-turn-helix motif	PRINTS	PR00031	HTHREPRESSR	coord: 91..100 score: 53.5 coord: 100..116 score: 59.22
IPR001356	Homeobox domain	SMART	SM00389	HOX_1	coord: 63..124 e-value: 2.5E-19 score: 80.2
IPR001356	Homeobox domain	PFAM	PF00046	Homeobox	coord: 65..118 e-value: 4.3E-17 score: 61.6
IPR001356	Homeobox domain	PROSITE	PS50071	HOMEOBOX_2	coord: 60..120 score: 17.799
IPR001356	Homeobox domain	CDD	cd00086	homeodomain	coord: 65..121 e-value: 4.41911E-18 score: 74.9724
IPR003106	Leucine zipper, homeobox-associated	PFAM	PF02183	HALZ	coord: 120..162 e-value: 1.2E-16 score: 60.5
IPR017970	Homeobox, conserved site	PROSITE	PS00027	HOMEOBOX_1	coord: 95..118
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	SSF46689	Homeodomain-like	coord: 48..122

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_5G037250	CSPI05G28170	Wild cucumber (PI 183967)	cpicucB284
CsaV3_5G037250	CSPI03G39800	Wild cucumber (PI 183967)	cpicucB175
CsaV3_5G037250	Cucsa.159020	Cucumber (Gy14) v1	cgycucB244
CsaV3_5G037250	CmaCh04G027150	Cucurbita maxima (Rimu)	cmacucB0860
CsaV3_5G037250	CmaCh15G003290	Cucurbita maxima (Rimu)	cmacucB0353
CsaV3_5G037250	CmoCh15G003400	Cucurbita moschata (Rifu)	cmocucB0348
CsaV3_5G037250	CmoCh04G028450	Cucurbita moschata (Rifu)	cmocucB0846
CsaV3_5G037250	Cp4.1LG13g08820	Cucurbita pepo (Zucchini)	cpecucB0210
CsaV3_5G037250	Cp4.1LG01g23240	Cucurbita pepo (Zucchini)	cpecucB0517
CsaV3_5G037250	CsGy5G027520	Cucumber (Gy14) v2	cgybcucB232
CsaV3_5G037250	Carg02294	Silver-seed gourd	carcucB0296
CsaV3_5G037250	Carg04426	Silver-seed gourd	carcucB0725
CsaV3_5G037250	MELO3C021534	Melon (DHL92) v3.5.1	cucmeB358
CsaV3_5G037250	ClCG09G018860	Watermelon (Charleston Gray)	cucwcgB363
CsaV3_5G037250	Lsi02G015550	Bottle gourd (USVL1VR-Ls)	cuclsiB371
CsaV3_5G037250	MELO3C021534.2	Melon (DHL92) v3.6.1	cucmedB350
CsaV3_5G037250	Cla97C09G180320	Watermelon (97103) v2	cucwmbB425
CsaV3_5G037250	Bhi06G000416	Wax gourd	cucwgoB482

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CsaV3_5G037250	CsaV3_3G042290	Cucumber (Chinese Long) v3	cuccucB134

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_5G037250	Watermelon (97103) v1	cucwmB388