CsaV3_5G035110 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.CGAAAATACCCCCTGCGTCTTCACCCAGCATCCTTTCTATTTCTATAAATCCTCACTTTGTTTTTCATATTCTCAGCGCTTCAAAACGAGACTTACAAGTTTTTACTCAAAGGCTTCACCGATGCAGTTCACGGCGGCGATGAATACTTTATCGGCGTTTTTCTTTCCGCTGCCTCCATCACTGTTAGTTAACGTGATGACGGTGGTGAGTTCGGTGGTGGTAGCGGTCATAGGGTTTTCGGAAGCGAGAGGAACGCATTTGCAGTATTCAAAGTTCTGGAATACGAGTAATAGTGCTACGAAATCATCCAACTCAGAGCAACTCAGGATTTCCTCAAGATTAGGGATGCTCCTGCTTTATACTCCGGCGGTTCTCGCCGGCGCTGCGTCGTTCTGGTTCTTACCGAACGACGATTTGAGAGTTCTTCTGCTTAAGTCCGCTCTCACTTTCCATTTCTTCAAGCGCGACTTTGAGGTAATCTATTTCTTTCTGATTTTGTCAATAAATCAAGATCTGGAATATAGTCTAAGCCTTGTTAATGGATTTATGTTGTTGAATGAAAGTTCTTGCTCTGTTTGTGTGATTGATTCTTTACTATTCGTTTTCTTTTGAAGAATTAGTTATTCAATATTGTTTGATTCGTTTTTGGTACTCGGTCGAACGAGAATCAGGGATTTTTTGAGAACGTGTTGACCTTCCTCTGTACTTTTCGATTTGATTTGAATTCTTTAAAAGTAGTTTGATCTATTTTTGGATCTTGGACAAGAAGCATAGTTTTGTTGACATTCAATTTCTTGATGAACTTCATGAGTCATCATCATTAAAATCTTGGCGGATAAGCTCAACTTGCGTACGAATCCTCCATCTCTGTTACAAACCATTTTTAAAATTTGAGGGACTAAAAGGTTGTTTCATCTCATTAATTTTTAAAATTTTCTTCTCTCTCTTCCTTGTGACATTTCTCTTTCTTCTTCTAGTAAACTATTAGTTAAAATAATACTTCTTTCCTCACTTGGGAACTGCTGCAGAGATCTTATTAAGCTAAACTAAAGAATTAATCAACAATTAATTAATTGGAAAAACAAAACTGAACTTCGCAGTTCGTTGGAAAAACTAAATGAAATCATAAACTCTTATAAATTCTACAGGTACTATTTGTTCACAAATACAGCGGCAAGATGGTAATTGATTCAGCATTAATCATCTCCCTCAGCTACTTCTCTTCTACAGCACTTATGATATACGCTCAACAGCAATCAAAAGCACTTCCAGAGCCAACCATTGATCTGAAAAACATCGGAATTGCTGTGTTTGTAATAGGCATTATTGGTAACATGTACCACCATATTCTTTTGTCTCAAACTAGAAAAAAAGGAGAAACAGGCTACAAAATCCCCAAAGGAGGCCTCTTCGGCATCATCATCTGCCCACACTACATGTTCGAAATAACTGTGTATTTCGGCTTTGCTCTCATCTCTCAGACATTTTACGCATTCTTCTTCGCCATTGCCACCGCTATCTATCTGGGTGGAAGAAGCTACGCCACACGGAAATGGTACGTCTCTAAATTTGAAGACTTCCCTCAACATATCAAAGCCCTCATTCCCTTCGTATTCTAGGCTGAGTTAAATTATATAAATCATCCCTCAACTTTCTCCAAGAACATGTACCTTTAAATTACTGTCCAAGTTGTGCATTATTATCATTACCTTTGACATTTGAATCAACGTCAGAATTGGATCATTGTACTATTTCTTTGATCAGTCTCCGGCTTCCATTGATGTCTCGTACTCACATTGAATAATTTATGTGTAGTAATGTCAGCTCTACGAAAAGTAACCCCTAGGAGTTGTTGTATTATTGTAGGGGTAACATTGAATAATTTAGTTTTAGATATTTGAAATAATTGTTGTGTTATTTTTGGAGGCTTTTTATGTAATTTCAGTTTGATGTAATCGTTGTAATGTATCAAATGTTTCTCTGGGCATAATCAAATAATTGATTGATTGATTTGCTGCTATAATCAAGTATGCATTAACCATGTATATCTGTTCGTATTGTAGAATTTGATTTATCATAAATTTATGTATCGGTC ATGCAGTTCACGGCGGCGATGAATACTTTATCGGCGTTTTTCTTTCCGCTGCCTCCATCACTGTTAGTTAACGTGATGACGGTGGTGAGTTCGGTGGTGGTAGCGGTCATAGGGTTTTCGGAAGCGAGAGGAACGCATTTGCAGTATTCAAAGTTCTGGAATACGAGTAATAGTGCTACGAAATCATCCAACTCAGAGCAACTCAGGATTTCCTCAAGATTAGGGATGCTCCTGCTTTATACTCCGGCGGTTCTCGCCGGCGCTGCGTCGTTCTGGTTCTTACCGAACGACGATTTGAGAGTTCTTCTGCTTAAGTCCGCTCTCACTTTCCATTTCTTCAAGCGCGACTTTGAGGTACTATTTGTTCACAAATACAGCGGCAAGATGGTAATTGATTCAGCATTAATCATCTCCCTCAGCTACTTCTCTTCTACAGCACTTATGATATACGCTCAACAGCAATCAAAAGCACTTCCAGAGCCAACCATTGATCTGAAAAACATCGGAATTGCTGTGTTTGTAATAGGCATTATTGGTAACATGTACCACCATATTCTTTTGTCTCAAACTAGAAAAAAAGGAGAAACAGGCTACAAAATCCCCAAAGGAGGCCTCTTCGGCATCATCATCTGCCCACACTACATGTTCGAAATAACTGTGTATTTCGGCTTTGCTCTCATCTCTCAGACATTTTACGCATTCTTCTTCGCCATTGCCACCGCTATCTATCTGGGTGGAAGAAGCTACGCCACACGGAAATGGTACGTCTCTAAATTTGAAGACTTCCCTCAACATATCAAAGCCCTCATTCCCTTCGTATTCTAG ATGCAGTTCACGGCGGCGATGAATACTTTATCGGCGTTTTTCTTTCCGCTGCCTCCATCACTGTTAGTTAACGTGATGACGGTGGTGAGTTCGGTGGTGGTAGCGGTCATAGGGTTTTCGGAAGCGAGAGGAACGCATTTGCAGTATTCAAAGTTCTGGAATACGAGTAATAGTGCTACGAAATCATCCAACTCAGAGCAACTCAGGATTTCCTCAAGATTAGGGATGCTCCTGCTTTATACTCCGGCGGTTCTCGCCGGCGCTGCGTCGTTCTGGTTCTTACCGAACGACGATTTGAGAGTTCTTCTGCTTAAGTCCGCTCTCACTTTCCATTTCTTCAAGCGCGACTTTGAGGTACTATTTGTTCACAAATACAGCGGCAAGATGGTAATTGATTCAGCATTAATCATCTCCCTCAGCTACTTCTCTTCTACAGCACTTATGATATACGCTCAACAGCAATCAAAAGCACTTCCAGAGCCAACCATTGATCTGAAAAACATCGGAATTGCTGTGTTTGTAATAGGCATTATTGGTAACATGTACCACCATATTCTTTTGTCTCAAACTAGAAAAAAAGGAGAAACAGGCTACAAAATCCCCAAAGGAGGCCTCTTCGGCATCATCATCTGCCCACACTACATGTTCGAAATAACTGTGTATTTCGGCTTTGCTCTCATCTCTCAGACATTTTACGCATTCTTCTTCGCCATTGCCACCGCTATCTATCTGGGTGGAAGAAGCTACGCCACACGGAAATGGTACGTCTCTAAATTTGAAGACTTCCCTCAACATATCAAAGCCCTCATTCCCTTCGTATTCTAG MQFTAAMNTLSAFFFPLPPSLLVNVMTVVSSVVVAVIGFSEARGTHLQYSKFWNTSNSATKSSNSEQLRISSRLGMLLLYTPAVLAGAASFWFLPNDDLRVLLLKSALTFHFFKRDFEVLFVHKYSGKMVIDSALIISLSYFSSTALMIYAQQQSKALPEPTIDLKNIGIAVFVIGIIGNMYHHILLSQTRKKGETGYKIPKGGLFGIIICPHYMFEITVYFGFALISQTFYAFFFAIATAIYLGGRSYATRKWYVSKFEDFPQHIKALIPFVF
BLAST of CsaV3_5G035110 vs. NCBI nr
Match: XP_011655823.1 (PREDICTED: steroid 5-alpha-reductase DET2 [Cucumis sativus] >KGN52160.1 hypothetical protein Csa_5G612890 [Cucumis sativus]) HSP 1 Score: 532.3 bits (1370), Expect = 9.5e-148 Identity = 274/274 (100.00%), Postives = 274/274 (100.00%), Query Frame = 0
BLAST of CsaV3_5G035110 vs. NCBI nr
Match: XP_008446723.1 (PREDICTED: 3-oxo-5-alpha-steroid 4-dehydrogenase 1-like [Cucumis melo]) HSP 1 Score: 491.5 bits (1264), Expect = 1.9e-135 Identity = 250/268 (93.28%), Postives = 257/268 (95.90%), Query Frame = 0
BLAST of CsaV3_5G035110 vs. NCBI nr
Match: XP_023518338.1 (3-oxo-5-alpha-steroid 4-dehydrogenase 2-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 442.6 bits (1137), Expect = 9.9e-121 Identity = 223/271 (82.29%), Postives = 246/271 (90.77%), Query Frame = 0
BLAST of CsaV3_5G035110 vs. NCBI nr
Match: XP_022956834.1 (3-oxo-5-alpha-steroid 4-dehydrogenase 1-like [Cucurbita moschata]) HSP 1 Score: 439.1 bits (1128), Expect = 1.1e-119 Identity = 223/271 (82.29%), Postives = 244/271 (90.04%), Query Frame = 0
BLAST of CsaV3_5G035110 vs. NCBI nr
Match: XP_022984712.1 (3-oxo-5-alpha-steroid 4-dehydrogenase 2-like [Cucurbita maxima]) HSP 1 Score: 431.8 bits (1109), Expect = 1.8e-117 Identity = 218/271 (80.44%), Postives = 243/271 (89.67%), Query Frame = 0
BLAST of CsaV3_5G035110 vs. TAIR10
Match: AT5G16010.1 (3-oxo-5-alpha-steroid 4-dehydrogenase family protein) HSP 1 Score: 325.1 bits (832), Expect = 4.2e-89 Identity = 168/269 (62.45%), Postives = 210/269 (78.07%), Query Frame = 0
BLAST of CsaV3_5G035110 vs. TAIR10
Match: AT2G38050.1 (3-oxo-5-alpha-steroid 4-dehydrogenase family protein) HSP 1 Score: 76.3 bits (186), Expect = 3.4e-14 Identity = 39/108 (36.11%), Postives = 67/108 (62.04%), Query Frame = 0
BLAST of CsaV3_5G035110 vs. TAIR10
Match: AT3G55360.1 (3-oxo-5-alpha-steroid 4-dehydrogenase family protein) HSP 1 Score: 67.4 bits (163), Expect = 1.6e-11 Identity = 46/137 (33.58%), Postives = 68/137 (49.64%), Query Frame = 0
BLAST of CsaV3_5G035110 vs. TAIR10
Match: AT2G16530.1 (3-oxo-5-alpha-steroid 4-dehydrogenase family protein) HSP 1 Score: 60.8 bits (146), Expect = 1.5e-09 Identity = 38/117 (32.48%), Postives = 58/117 (49.57%), Query Frame = 0
BLAST of CsaV3_5G035110 vs. TAIR10
Match: AT1G72590.1 (3-oxo-5-alpha-steroid 4-dehydrogenase family protein) HSP 1 Score: 59.7 bits (143), Expect = 3.3e-09 Identity = 38/117 (32.48%), Postives = 56/117 (47.86%), Query Frame = 0
BLAST of CsaV3_5G035110 vs. Swiss-Prot
Match: sp|Q2QDF6|DET2_GOSHI (Steroid 5-alpha-reductase DET2 OS=Gossypium hirsutum OX=3635 GN=DET2 PE=1 SV=1) HSP 1 Score: 92.0 bits (227), Expect = 1.1e-17 Identity = 64/219 (29.22%), Postives = 116/219 (52.97%), Query Frame = 0
BLAST of CsaV3_5G035110 vs. Swiss-Prot
Match: sp|Q28891|S5A1_MACFA (3-oxo-5-alpha-steroid 4-dehydrogenase 1 OS=Macaca fascicularis OX=9541 GN=SRD5A1 PE=1 SV=1) HSP 1 Score: 88.6 bits (218), Expect = 1.2e-16 Identity = 43/107 (40.19%), Postives = 66/107 (61.68%), Query Frame = 0
BLAST of CsaV3_5G035110 vs. Swiss-Prot
Match: sp|P18405|S5A1_HUMAN (3-oxo-5-alpha-steroid 4-dehydrogenase 1 OS=Homo sapiens OX=9606 GN=SRD5A1 PE=1 SV=1) HSP 1 Score: 87.0 bits (214), Expect = 3.5e-16 Identity = 42/107 (39.25%), Postives = 66/107 (61.68%), Query Frame = 0
BLAST of CsaV3_5G035110 vs. Swiss-Prot
Match: sp|P24008|S5A1_RAT (3-oxo-5-alpha-steroid 4-dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Srd5a1 PE=1 SV=2) HSP 1 Score: 86.7 bits (213), Expect = 4.5e-16 Identity = 44/105 (41.90%), Postives = 64/105 (60.95%), Query Frame = 0
BLAST of CsaV3_5G035110 vs. Swiss-Prot
Match: sp|Q55C17|TECR_DICDI (Very-long-chain enoyl-CoA reductase OS=Dictyostelium discoideum OX=44689 GN=gpsn2 PE=3 SV=1) HSP 1 Score: 85.9 bits (211), Expect = 7.7e-16 Identity = 59/192 (30.73%), Postives = 96/192 (50.00%), Query Frame = 0
BLAST of CsaV3_5G035110 vs. TrEMBL
Match: tr|A0A0A0KRA7|A0A0A0KRA7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G612890 PE=4 SV=1) HSP 1 Score: 532.3 bits (1370), Expect = 6.3e-148 Identity = 274/274 (100.00%), Postives = 274/274 (100.00%), Query Frame = 0
BLAST of CsaV3_5G035110 vs. TrEMBL
Match: tr|A0A1S3BGE8|A0A1S3BGE8_CUCME (3-oxo-5-alpha-steroid 4-dehydrogenase 1-like OS=Cucumis melo OX=3656 GN=LOC103489361 PE=4 SV=1) HSP 1 Score: 491.5 bits (1264), Expect = 1.2e-135 Identity = 250/268 (93.28%), Postives = 257/268 (95.90%), Query Frame = 0
BLAST of CsaV3_5G035110 vs. TrEMBL
Match: tr|A0A1S3BFS0|A0A1S3BFS0_CUCME (3-oxo-5-alpha-steroid 4-dehydrogenase 2-like OS=Cucumis melo OX=3656 GN=LOC103489360 PE=4 SV=1) HSP 1 Score: 362.5 bits (929), Expect = 8.6e-97 Identity = 183/271 (67.53%), Postives = 215/271 (79.34%), Query Frame = 0
BLAST of CsaV3_5G035110 vs. TrEMBL
Match: tr|A0A0A0KWK8|A0A0A0KWK8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G612900 PE=4 SV=1) HSP 1 Score: 362.1 bits (928), Expect = 1.1e-96 Identity = 180/269 (66.91%), Postives = 215/269 (79.93%), Query Frame = 0
BLAST of CsaV3_5G035110 vs. TrEMBL
Match: tr|A0A1S3BGK3|A0A1S3BGK3_CUCME (3-oxo-5-alpha-steroid 4-dehydrogenase 1-like OS=Cucumis melo OX=3656 GN=LOC103489362 PE=4 SV=1) HSP 1 Score: 357.8 bits (917), Expect = 2.1e-95 Identity = 178/269 (66.17%), Postives = 211/269 (78.44%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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