CsaV3_5G026680 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.AAGAAGAAGAAATGAATAAGAAGAAGAAATGAATAAGAAGAAGAAATGAATAAGAAGAATTAAACATAAATATGCGTCTTGGTTCAACTGAATTCATTTTTCTTTTCTTTTTTTCCTTATCCACTTTTGCGATATTTCCGCGTAATCGAAGAGACTTACTTGGTCTTCAAGAATATCAGAGGATATTTTCGTCCTTTTACTATTTCTCCGCGCCTTTATATACATTTCTTCTTTCTCTTCCTTCCTTCCGTCTACCCTCCTCTTCTTCTTCCCTTTTTGCACCCAAATTCAACCACCTTCGTTCTTTTTCCTTTCTCTCCTTCTTTCTTCTCTACCCATTTCCATTCTATTCTCTCTTTTCTTCCTTTTCTTTTCTCTCTAGGACATCGTTTTCCAATTCCCATTATTCTATTGGCTTCTAATTTGAAGCCCCCAAATTCTCAATTCCCCCCCCCTCCCCCCCCCCCCCTTTTGAAGACCAACGATGATTTCCGTTAATACAGAAGATGGGGTTGGCCATGTGTTGTAATTGGAGGGTTGTGGGTAGGTGGAGAGGTAAAGAGGCGAAACGGGAGCTTTTTTGCGGGTGGAAATGGACTGCCGGGTATGCGTTGCGGGTGGGGATTTATGGGTCAAGGTAGGTGCGCGTGTTGGTGGTGTGGGACAGATGGGAGGTTTTAGCCATGAGAGCGAACATGATTTGGCTCTTATGGTTAGCGATTTCTTGGAAAATGGAAGCGGTGGAGGTGACTCTTGGTGTAGTAGCGATAGCGATTCTGGTGTTTCCGATCTTGCTCATCTTGCTGAAAAGATTGTGGTAACTTTCTCTCTTTTTTTTTTTTTTTAATTTTGTTTAGTTCTTGTTTGATTTATTGACTTTTAGCTTGGTTGTTGGAGATGGGATGTAATCATTTTATATGATTCCTCTTTTTGGTAATGTGTTTTTGACTTGAACGATTGATTGATATGGTTATGAGTGCCAACACGGATGTTCTTTTTTTATATATAGTTTCCTGGTAATTGAGTATTTCGATTATATTTTAATCTCCTTCGATGGGAATTTTCAATTGTTGTGTTTCTTTGTTTAGAACTATAAGGAAAAGGCTGTTGCATTGGATTTTCAATTCCTTGTTTTGAAATATGAATAACGGTTATGAATGCTTGAAGTTTTGATTATAACTGCTCTTGGATTCATGCTGCCTCTGAATTTGTCATTTGATTTGAGAATTGGGTTAGATAGGAAATGGGGAAACAAATTTAATTGCCTGCAAAACTTTAGGAATTTTTTTTAAACCCCTTGTTTAGAGGAGTCTAGATCAATCTTAAATTCTGTAACTGTTCATCAAGTGAATCATAAACTTGACATATTGGTGAAATTGAAACCATTGTTTTGAGTATCATCTTTTGGAGATGTCTAGTTTAGTTGGGTGTCCTTTTGCCCTTTATTGGTTTAGTTTGGCTCCTTTTTGTGCTGGTTTTTTCGTATGCGTGCTAACCTCTTCGTCTTTGTATTCTTTCATTTCTTTTTCAATGTCTAGTTTCTTTTTGCTCTGTAGCCTGGCCTGGAGTAACTTTTGCTTGTTTGATATTGTGGGATGGAGTATTTTTGTGGCTAGTTTTTCAACTCCTATTGAATGAAATTTGAGGTGGTATATTTGCTGGTTATGTATGGGGAACTTTAGACATTAGTTATGCCAATTATTCAAATGCTTTAAAATTGAATTACAGGTAAACATTGTATACCTTGTGAAGCTTAATTTTCTACCCCTGCAGCCTTCCTTCCATTTGAAGAGCATATATCTCTATACGAGAGTACTGTTATATGATGTTTGATGTAACTGAATTGTTGGATCTCTTCTTTGTAAACTGTACACGAATTGCATCCATTGGTTTTGTGATTTATTATTGTCCTGCACATTTTTCTGATGAAATCAAGTAGATGATAGATATAATTGATTAACTTCTTACAATATGTTGTTTATTTCTGCCAGTTCTATAAGAATCCAGTATCCCAGTACGAAAGTGATTTGCTTTCGGTTGTTCATTCGCTTACCTTGTCAATGAATGAGAAGGATTTGAACATGAACAAGGCCGGTCCTTGCAATGCTAGTTGTATCCGGTTTGTTTTGGTGAAGCTACTGCGACGTTCCGGTTATGATGCTGCTGTATGTACAACCAGATGGCAGGGTGCTGGCAAGGTCCCTGGAGGTATCCCTTCAAAAAACCTTATTGATTTTACTTCTAAGATGGAGAATTTTCTGTTGAAATAACAAATAAAGTGATAAAGAATTCAATTGGGAGTGTGTGGGTGTGGTTTAATTACTTTTTAGTTGTAAATTCATCTTTAAGCATAAGAATAAGCTTCTCTTTAGTAATTTATTCCATCAGAAGTTCTATTCTTTGCTTTTTTAGTGTGGTGCTTTAGGGTATATTATCTGGGAGTTTGATACTCTATTTTATGAAGGAATGAGGGTGAAACTTCTCTGCAATCGTCCAGCACCTTTTCTTTAATCCAACATAACGCGTTTTGCTTTACATCTACAGGAGATCACGAGTATATTGATGTAGTTAACTACACCTCTGGAAGCTCGGAGAGGTTGATAGTTGATATCGATTTCCGAAGCCACTTTGAAATAGCCAGGGCAGTCGAATCCTATGATAGAATATTGAATTCTCTTCCGGTAATCTATGTGGGATCGTTACCCCGGCTTAAGCATTTCCTTCAAATTATGGTTGAAGCTGCAAAGTCTTCACTTAAGCTAAACTCCATGCCACTTCCTCCATGGAGATCGCTTGCATACTTGCAAGCCAAATGGCAATCACCATGCCAGAGAATGCTTCATCCCGAAGAACAGCAGCAGTTGGGGAGCAGAGACATGTTGATGAGCCACAAGCAATGTATTGGACACTTAAAGAGACTTCAGTCAGTACTCCAATCAGAGATCGAAACAGATCGGTTTTTGAGGCCGGTGAACGGTGATAACATTAGGAAAATAAAGAGCGAGAGGCGACGACACTCGTTGTTGAGAACCATTTGACGAAAAGATGTACAGATGAAACCGAAAAAAAGAAATTTTTTGAGGAGATTGACGAGGAATTGTGTAGCACGGCTTTTTTATTTGTTATTTGTTTTTTGATTGTTGGGGTAACTGAGTTTATATGAAATAAAAAGTATGAACCTGAAGATGATGAGCATTCTGAAGTTCATGCAGCAAAAATGTAGAAGCAGAATGAAAGCACAAGCAGAATGAAAGCAAAGAAGAATTGGATTTGGAAATTACAAACAACCAACTAACAGAGGAACACACTGCTTGCTTCTTTTATTTTGGTCCTTTTTTTTTTT ATGGACTGCCGGGTATGCGTTGCGGGTGGGGATTTATGGGTCAAGGTAGGTGCGCGTGTTGGTGGTGTGGGACAGATGGGAGGTTTTAGCCATGAGAGCGAACATGATTTGGCTCTTATGGTTAGCGATTTCTTGGAAAATGGAAGCGGTGGAGGTGACTCTTGGTGTAGTAGCGATAGCGATTCTGGTGTTTCCGATCTTGCTCATCTTGCTGAAAAGATTGTGTTCTATAAGAATCCAGTATCCCAGTACGAAAGTGATTTGCTTTCGGTTGTTCATTCGCTTACCTTGTCAATGAATGAGAAGGATTTGAACATGAACAAGGCCGGTCCTTGCAATGCTAGTTGTATCCGGTTTGTTTTGGTGAAGCTACTGCGACGTTCCGGTTATGATGCTGCTGTATGTACAACCAGATGGCAGGGTGCTGGCAAGGTCCCTGGAGGAGATCACGAGTATATTGATGTAGTTAACTACACCTCTGGAAGCTCGGAGAGGTTGATAGTTGATATCGATTTCCGAAGCCACTTTGAAATAGCCAGGGCAGTCGAATCCTATGATAGAATATTGAATTCTCTTCCGGTAATCTATGTGGGATCGTTACCCCGGCTTAAGCATTTCCTTCAAATTATGGTTGAAGCTGCAAAGTCTTCACTTAAGCTAAACTCCATGCCACTTCCTCCATGGAGATCGCTTGCATACTTGCAAGCCAAATGGCAATCACCATGCCAGAGAATGCTTCATCCCGAAGAACAGCAGCAGTTGGGGAGCAGAGACATGTTGATGAGCCACAAGCAATGTATTGGACACTTAAAGAGACTTCAGTCAGTACTCCAATCAGAGATCGAAACAGATCGGTTTTTGAGGCCGGTGAACGGTGATAACATTAGGAAAATAAAGAGCGAGAGGCGACGACACTCGTTGTTGAGAACCATTTGA ATGGACTGCCGGGTATGCGTTGCGGGTGGGGATTTATGGGTCAAGGTAGGTGCGCGTGTTGGTGGTGTGGGACAGATGGGAGGTTTTAGCCATGAGAGCGAACATGATTTGGCTCTTATGGTTAGCGATTTCTTGGAAAATGGAAGCGGTGGAGGTGACTCTTGGTGTAGTAGCGATAGCGATTCTGGTGTTTCCGATCTTGCTCATCTTGCTGAAAAGATTGTGTTCTATAAGAATCCAGTATCCCAGTACGAAAGTGATTTGCTTTCGGTTGTTCATTCGCTTACCTTGTCAATGAATGAGAAGGATTTGAACATGAACAAGGCCGGTCCTTGCAATGCTAGTTGTATCCGGTTTGTTTTGGTGAAGCTACTGCGACGTTCCGGTTATGATGCTGCTGTATGTACAACCAGATGGCAGGGTGCTGGCAAGGTCCCTGGAGGAGATCACGAGTATATTGATGTAGTTAACTACACCTCTGGAAGCTCGGAGAGGTTGATAGTTGATATCGATTTCCGAAGCCACTTTGAAATAGCCAGGGCAGTCGAATCCTATGATAGAATATTGAATTCTCTTCCGGTAATCTATGTGGGATCGTTACCCCGGCTTAAGCATTTCCTTCAAATTATGGTTGAAGCTGCAAAGTCTTCACTTAAGCTAAACTCCATGCCACTTCCTCCATGGAGATCGCTTGCATACTTGCAAGCCAAATGGCAATCACCATGCCAGAGAATGCTTCATCCCGAAGAACAGCAGCAGTTGGGGAGCAGAGACATGTTGATGAGCCACAAGCAATGTATTGGACACTTAAAGAGACTTCAGTCAGTACTCCAATCAGAGATCGAAACAGATCGGTTTTTGAGGCCGGTGAACGGTGATAACATTAGGAAAATAAAGAGCGAGAGGCGACGACACTCGTTGTTGAGAACCATTTGA MDCRVCVAGGDLWVKVGARVGGVGQMGGFSHESEHDLALMVSDFLENGSGGGDSWCSSDSDSGVSDLAHLAEKIVFYKNPVSQYESDLLSVVHSLTLSMNEKDLNMNKAGPCNASCIRFVLVKLLRRSGYDAAVCTTRWQGAGKVPGGDHEYIDVVNYTSGSSERLIVDIDFRSHFEIARAVESYDRILNSLPVIYVGSLPRLKHFLQIMVEAAKSSLKLNSMPLPPWRSLAYLQAKWQSPCQRMLHPEEQQQLGSRDMLMSHKQCIGHLKRLQSVLQSEIETDRFLRPVNGDNIRKIKSERRRHSLLRTI
BLAST of CsaV3_5G026680 vs. NCBI nr
Match: XP_004142760.2 (PREDICTED: uncharacterized protein LOC101214727 [Cucumis sativus] >KGN51315.1 hypothetical protein Csa_5G517130 [Cucumis sativus]) HSP 1 Score: 627.9 bits (1618), Expect = 1.9e-176 Identity = 311/311 (100.00%), Postives = 311/311 (100.00%), Query Frame = 0
BLAST of CsaV3_5G026680 vs. NCBI nr
Match: XP_008458875.1 (PREDICTED: uncharacterized protein LOC103498149 [Cucumis melo]) HSP 1 Score: 607.8 bits (1566), Expect = 2.0e-170 Identity = 298/311 (95.82%), Postives = 304/311 (97.75%), Query Frame = 0
BLAST of CsaV3_5G026680 vs. NCBI nr
Match: XP_022992696.1 (uncharacterized protein LOC111488959 [Cucurbita maxima]) HSP 1 Score: 560.8 bits (1444), Expect = 2.8e-156 Identity = 283/316 (89.56%), Postives = 295/316 (93.35%), Query Frame = 0
BLAST of CsaV3_5G026680 vs. NCBI nr
Match: XP_022939263.1 (uncharacterized protein LOC111445233 [Cucurbita moschata]) HSP 1 Score: 559.3 bits (1440), Expect = 8.2e-156 Identity = 282/316 (89.24%), Postives = 296/316 (93.67%), Query Frame = 0
BLAST of CsaV3_5G026680 vs. NCBI nr
Match: XP_023549619.1 (uncharacterized protein LOC111808066 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 557.8 bits (1436), Expect = 2.4e-155 Identity = 281/316 (88.92%), Postives = 296/316 (93.67%), Query Frame = 0
BLAST of CsaV3_5G026680 vs. TAIR10
Match: AT2G39650.1 (Protein of unknown function (DUF506) ) HSP 1 Score: 318.2 bits (814), Expect = 5.8e-87 Identity = 163/267 (61.05%), Postives = 204/267 (76.40%), Query Frame = 0
BLAST of CsaV3_5G026680 vs. TAIR10
Match: AT3G07350.1 (Protein of unknown function (DUF506) ) HSP 1 Score: 119.8 bits (299), Expect = 3.0e-27 Identity = 56/126 (44.44%), Postives = 83/126 (65.87%), Query Frame = 0
BLAST of CsaV3_5G026680 vs. TAIR10
Match: AT4G14620.1 (Protein of unknown function (DUF506) ) HSP 1 Score: 119.8 bits (299), Expect = 3.0e-27 Identity = 79/229 (34.50%), Postives = 118/229 (51.53%), Query Frame = 0
BLAST of CsaV3_5G026680 vs. TAIR10
Match: AT2G38820.2 (Protein of unknown function (DUF506) ) HSP 1 Score: 118.6 bits (296), Expect = 6.8e-27 Identity = 80/233 (34.33%), Postives = 123/233 (52.79%), Query Frame = 0
BLAST of CsaV3_5G026680 vs. TAIR10
Match: AT4G32480.1 (Protein of unknown function (DUF506) ) HSP 1 Score: 115.9 bits (289), Expect = 4.4e-26 Identity = 51/132 (38.64%), Postives = 83/132 (62.88%), Query Frame = 0
BLAST of CsaV3_5G026680 vs. TrEMBL
Match: tr|A0A0A0KNU6|A0A0A0KNU6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G517130 PE=4 SV=1) HSP 1 Score: 627.9 bits (1618), Expect = 1.2e-176 Identity = 311/311 (100.00%), Postives = 311/311 (100.00%), Query Frame = 0
BLAST of CsaV3_5G026680 vs. TrEMBL
Match: tr|A0A1S3C8F2|A0A1S3C8F2_CUCME (uncharacterized protein LOC103498149 OS=Cucumis melo OX=3656 GN=LOC103498149 PE=4 SV=1) HSP 1 Score: 607.8 bits (1566), Expect = 1.3e-170 Identity = 298/311 (95.82%), Postives = 304/311 (97.75%), Query Frame = 0
BLAST of CsaV3_5G026680 vs. TrEMBL
Match: tr|A0A2N9IRX9|A0A2N9IRX9_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS54643 PE=4 SV=1) HSP 1 Score: 449.9 bits (1156), Expect = 4.7e-123 Identity = 231/311 (74.28%), Postives = 257/311 (82.64%), Query Frame = 0
BLAST of CsaV3_5G026680 vs. TrEMBL
Match: tr|M5XLL2|M5XLL2_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G235800 PE=4 SV=1) HSP 1 Score: 444.5 bits (1142), Expect = 2.0e-121 Identity = 223/312 (71.47%), Postives = 258/312 (82.69%), Query Frame = 0
BLAST of CsaV3_5G026680 vs. TrEMBL
Match: tr|A0A2I4DHP2|A0A2I4DHP2_9ROSI (uncharacterized protein LOC108980174 OS=Juglans regia OX=51240 GN=LOC108980174 PE=4 SV=1) HSP 1 Score: 436.8 bits (1122), Expect = 4.1e-119 Identity = 228/312 (73.08%), Postives = 258/312 (82.69%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |