CsaV3_5G026550 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_5G026550
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	CASP-like protein
Location	chr5 : 21707344 .. 21708757 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AATTAATTAAAAAATTAGCATAGAAAAGACCAAGTTGCGTATAGGATATTTCTTTAGATATCTTCACATGGTTTTACATATATATATAGAAGCAAAAGGGTATTGAATATTTGTGCTAAGAAAACTTCATAAAAGTTTCTGGGAAAAGAATGGCTTCAAAGGGTTTAAGAATTGCTTCTGTTATTTTGAGAATCTTAACCTTTATTTTTATATTTATTTCTCTCTTAATTGTTGCTACCAACACAAAAACTGTTTACAAATATACTGTTAATGAACACAAAGTTAAGTTCAGTGATGTAAATTCGTATCGGTAAGTCTTATTGTTTCTTTTTCTTTTGGTTCAATTCATATTATTAATATTATTGTGTTGTAATTAATTGATGTGTTTTGAATTTAAATGTGTCACAGGTATGTGGTAGCAGCTACTGTTATAGGAGGTGCTTTATGTCTCCTTCAAATTGCTTTCAACATTTACCATCTTGTTACTAAAGCCGAGGGAACTCCTCTTTTCTATATGTTCAGCGATCAGGTCATCATCCATTAACTTTCCAATTAAGTTAATTAAATTTTGCTTTAGTTATACATGGACTTTAACGTTTGAGATAGGGAGGAAAAGGAAAAAGAAAGAGAAAGAAAAGAACAATATCAGAGAAGAAAACGAAAAAGAGAGGAAGAAATAAATGCTCGAGCTGGGTTCGTGGTGACCTTTCTGTTGGTTTGAAATATTAGATTTAGGGATACACAATAGGAAAAATATGGAGAAACCTCACAAATTTTCAACTAGTGATTCCAATTGAAGATGGATATATATAATATCCCACCTCCCAACTTTTATAAGATATATACATGTAATTTATCTTATTATCAACTGGTTTAGATGTTTTGATGCTTTTGTACGTGCAGTTGTTAACGTACCTTCTATTATCGGCCGCATCGGCGGGATTAGGATCGGGGATCGACTTGAGAGCAAATATTAAAGTGCTGGTTGATGGCGATGATTACAGCTCATTTTTTGACAAAGGCAATGCTGGATCTGCTATTCTTTTCCTTGCCTTTATCTGTTCTGCCATTGTTTCAGTTCTCTCTTCTTTGGCTCTCATTAAAAAGCCTGTTTGATTCATAATAAGTTAGAATTCAAATTGTTTAATTGTGTTAGACTTTTGTTTAATTGTGTTAGACTTCTTTTCTTTTTTATTTGAAGTGTTGATGGAAGTGCATTTATTGGCTTGCGTGTATTTATGTATCCTCCTCTTTAGTAGTTGATGTATTACCTTTCAAATCAACAACGTTCTTAATGTCTCATAATTGCGCTCTATACCACATTCTAGCTAGAGATTCAAATTTTTGCCTAACACGTTAAACTCAAGAGAGAGAAAATGTATAACTATCAAATTTGTCTAATTTTGTCTTCACC

mRNA sequence

ATGGCTTCAAAGGGTTTAAGAATTGCTTCTGTTATTTTGAGAATCTTAACCTTTATTTTTATATTTATTTCTCTCTTAATTGTTGCTACCAACACAAAAACTGTTTACAAATATACTGTTAATGAACACAAAGTTAAGTTCAGTGATGTAAATTCGTATCGGTATGTGGTAGCAGCTACTGTTATAGGAGGTGCTTTATGTCTCCTTCAAATTGCTTTCAACATTTACCATCTTGTTACTAAAGCCGAGGGAACTCCTCTTTTCTATATGTTCAGCGATCAGTTGTTAACGTACCTTCTATTATCGGCCGCATCGGCGGGATTAGGATCGGGGATCGACTTGAGAGCAAATATTAAAGTGCTGGTTGATGGCGATGATTACAGCTCATTTTTTGACAAAGGCAATGCTGGATCTGCTATTCTTTTCCTTGCCTTTATCTGTTCTGCCATTGTTTCAGTTCTCTCTTCTTTGGCTCTCATTAAAAAGCCTGTTTGA

Coding sequence (CDS)

ATGGCTTCAAAGGGTTTAAGAATTGCTTCTGTTATTTTGAGAATCTTAACCTTTATTTTTATATTTATTTCTCTCTTAATTGTTGCTACCAACACAAAAACTGTTTACAAATATACTGTTAATGAACACAAAGTTAAGTTCAGTGATGTAAATTCGTATCGGTATGTGGTAGCAGCTACTGTTATAGGAGGTGCTTTATGTCTCCTTCAAATTGCTTTCAACATTTACCATCTTGTTACTAAAGCCGAGGGAACTCCTCTTTTCTATATGTTCAGCGATCAGTTGTTAACGTACCTTCTATTATCGGCCGCATCGGCGGGATTAGGATCGGGGATCGACTTGAGAGCAAATATTAAAGTGCTGGTTGATGGCGATGATTACAGCTCATTTTTTGACAAAGGCAATGCTGGATCTGCTATTCTTTTCCTTGCCTTTATCTGTTCTGCCATTGTTTCAGTTCTCTCTTCTTTGGCTCTCATTAAAAAGCCTGTTTGA

Protein sequence

MASKGLRIASVILRILTFIFIFISLLIVATNTKTVYKYTVNEHKVKFSDVNSYRYVVAATVIGGALCLLQIAFNIYHLVTKAEGTPLFYMFSDQLLTYLLLSAASAGLGSGIDLRANIKVLVDGDDYSSFFDKGNAGSAILFLAFICSAIVSVLSSLALIKKPV

Homology

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BLAST of CsaV3_5G026550 vs. NCBI nr
Match: XP_004142753.1 (PREDICTED: CASP-like protein 4D1 [Cucumis sativus] >KGN51297.1 hypothetical protein Csa_5G515020 [Cucumis sativus])

HSP 1 Score: 285.0 bits (728), Expect = 1.6e-73
Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 0


Query: 1   MASKGLRIASVILRILTFIXXXXXXXXXXTNTKTVYKYTVNEHKVKFSDVNSYRYVVAAT 60
           MASKGLRIASVILRILTFIXXXXXXXXXXTNTKTVYKYTVNEHKVKFSDVNSYRYVVAAT
Sbjct: 1   MASKGLRIASVILRILTFIXXXXXXXXXXTNTKTVYKYTVNEHKVKFSDVNSYRYVVAAT 60

Query: 61  VIGGALCLLQIAFNIYHLVTKAEGTPLFYMFSDQLLTYLLLSAASAGLGSGIDLRANIKV 120
           VIGGALCLLQIAFNIYHLVTKAEGTPLFYMFSDQLLTYLLLSAASAGLGSGIDLRANIKV
Sbjct: 61  VIGGALCLLQIAFNIYHLVTKAEGTPLFYMFSDQLLTYLLLSAASAGLGSGIDLRANIKV 120

Query: 121 LVDGDDYSSFFDKGNAGSAILFLAFICSAIVSVLSSLALIKKPV 165
           LVDGDDYSSFFDKGNAGSAILFLAFICSAIVSVLSSLALIKKPV
Sbjct: 121 LVDGDDYSSFFDKGNAGSAILFLAFICSAIVSVLSSLALIKKPV 164

[Close]

BLAST of CsaV3_5G026550 vs. NCBI nr
Match: KGN51298.1 (hypothetical protein Csa_5G515030 [Cucumis sativus])

HSP 1 Score: 207.2 bits (526), Expect = 4.2e-50
Identity = 117/162 (72.22%), Postives = 131/162 (80.86%), Query Frame = 0


Query: 1   MASKGLRIASVILRILTFIXXXXXXXXXXTNTKTV-YKYTVNEHKVKFSDVNSYRYVVAA 60
           MASKGLRIAS+ILR LTFI          TN+KTV    TV E KVKF++V SYRY+VA 
Sbjct: 1   MASKGLRIASLILRNLTFILTFISLLIVATNSKTVLIDGTVGEVKVKFNNVASYRYLVAT 60

Query: 61  TVIGGALCLLQIAFNIYHLVTKAEGTPLFYMFSDQLLTYLLLSAASAGLGSGIDLRANIK 120
            VIGGAL LLQI FNIYHL+T  EGTPLFYMFSDQLLTYLLLS ASAGLG+GIDLR NIK
Sbjct: 61  AVIGGALSLLQIVFNIYHLITNGEGTPLFYMFSDQLLTYLLLSGASAGLGAGIDLRVNIK 120

Query: 121 VLVDGDDYSSFFDKGNAGSAILFLAFICSAIVSVLSSLALIK 162
            L++G  ++SFFDK NAGSAIL LAF+C+AIVSVLSSLALI+
Sbjct: 121 ELLEGTYFNSFFDKANAGSAILLLAFVCAAIVSVLSSLALIR 162

[Close]

BLAST of CsaV3_5G026550 vs. NCBI nr
Match: XP_022134193.1 (CASP-like protein 4D1 [Momordica charantia])

HSP 1 Score: 194.5 bits (493), Expect = 2.8e-46
Identity = 108/162 (66.67%), Postives = 129/162 (79.63%), Query Frame = 0


Query: 2   ASKGLRIASVILRILTFIXXXXXXXXXXTNTKTVYKYTVNEHKVKFSDVNSYRYVVAATV 61
           ASKG RIAS+ILRILTF+          TN+KTV K T  E KV+F DV SYRY+ AA V
Sbjct: 3   ASKGSRIASLILRILTFVLIFISLLIIATNSKTVLKGTEAEAKVEFKDVYSYRYLTAAAV 62

Query: 62  IGGALCLLQIAFNIYHLVTKAEGTPLFYMFSDQLLTYLLLSAASAGLGSGIDLRANIKVL 121
           IG AL LLQIA  +YH+VTK++GTP F MFSD+LLTYLLLS ASAGLG+GIDLR+N K L
Sbjct: 63  IGAALSLLQIALTLYHVVTKSDGTPFFDMFSDKLLTYLLLSGASAGLGAGIDLRSNYKDL 122

Query: 122 VDGDDYSSFFDKGNAGSAILFLAFICSAIVSVLSSLALIKKP 164
           V G+ ++SFFDKG+A +AIL LAFICSA+VS+LSSLAL++KP
Sbjct: 123 V-GNIFNSFFDKGSASAAILLLAFICSAVVSILSSLALVRKP 163

[Close]

BLAST of CsaV3_5G026550 vs. NCBI nr
Match: XP_022963262.1 (CASP-like protein 4D1 [Cucurbita moschata])

HSP 1 Score: 181.4 bits (459), Expect = 2.5e-42
Identity = 106/162 (65.43%), Postives = 137/162 (84.57%), Query Frame = 0


Query: 2   ASKGLRIASVILRILTFIXXXXXXXXXXTNTKTVYKYTVNEHKVKFSDVNSYRYVVAATV 61
           ASKG RIAS+ILRIL   XXXXXXXXXXTN+KT+ K T NE K++F +V SYRY++AA V
Sbjct: 3   ASKGSRIASLILRILXXXXXXXXXXXXXTNSKTLNKGTENEAKLEFKNVYSYRYLIAAAV 62

Query: 62  IGGALCLLQIAFNIYHLVTKAEGTPLFYMFSDQLLTYLLLSAASAGLGSGIDLRANIKVL 121
           IGG L L+QI  +IYH+VTK+EGTPLFY+FSD LL+YLLLS++SA LG+GID+RAN+K L
Sbjct: 63  IGGVLSLIQIILSIYHMVTKSEGTPLFYLFSDYLLSYLLLSSSSAALGAGIDMRANLKEL 122

Query: 122 VDGDDYSSFFDKGNAGSAILFLAFICSAIVSVLSSLALIKKP 164
             G  + SFFD+G+  +A+LF+AF+C+A+VS+LS+LALI+KP
Sbjct: 123 F-GTLFDSFFDQGSGAAAVLFIAFVCAAVVSILSALALIRKP 163

[Close]

BLAST of CsaV3_5G026550 vs. NCBI nr
Match: XP_022990642.1 (CASP-like protein 4D1 [Cucurbita maxima])

HSP 1 Score: 179.1 bits (453), Expect = 1.2e-41
Identity = 101/161 (62.73%), Postives = 123/161 (76.40%), Query Frame = 0


Query: 3   SKGLRIASVILRILTFIXXXXXXXXXXTNTKTVYKYTVNEHKVKFSDVNSYRYVVAATVI 62
           SKG RIAS+ILRILTFI          TN+KT+ K   NE K KF DV SYRY+++ T+I
Sbjct: 4   SKGSRIASLILRILTFILIFISLLINATNSKTLNKGAENETKFKFKDVYSYRYLISTTII 63

Query: 63  GGALCLLQIAFNIYHLVTKAEGTPLFYMFSDQLLTYLLLSAASAGLGSGIDLRANIKVLV 122
           G  L LLQIA NIY++VTK+  T LF MFSD+LL+YLLLS ASAGLG+GIDLR  +K LV
Sbjct: 64  GAVLSLLQIALNIYNVVTKSHRTLLFDMFSDKLLSYLLLSGASAGLGAGIDLRVGLKELV 123

Query: 123 DGDDYSSFFDKGNAGSAILFLAFICSAIVSVLSSLALIKKP 164
            G+  +SF DKGNA +A+L LAFIC+A+VS+LSSLALI+KP
Sbjct: 124 -GNLLNSFLDKGNASAAVLLLAFICAAVVSILSSLALIRKP 163

[Close]

BLAST of CsaV3_5G026550 vs. TAIR10
Match: AT2G39530.1 (Uncharacterised protein family (UPF0497))

HSP 1 Score: 77.4 bits (189), Expect = 9.1e-15
Identity = 52/141 (36.88%), Postives = 82/141 (58.16%), Query Frame = 0


Query: 30  TNTKTVYKYTVNEHKVKFSDVNSYRYVVAATVIGGALCLLQIAFNIYHLVTKAEGTPLFY 89
           TNT T+ + +    K+ F+DV +YRY+++A VIG    ++Q+   I    T  +  PL Y
Sbjct: 37  TNTVTL-EISSTSIKLPFNDVYAYRYMLSAAVIGLVYAVVQLFLTISQFAT-GKTHPLTY 96

Query: 90  MF---SDQLLTYLLLSAASAGLGSGIDLRANIKVLVD---GDDYSSFFDKGNAGSAILFL 149
            F    D++++YLL + ++AG G   DL+     L++    D    FF KG A +++L  
Sbjct: 97  QFDFYGDKVISYLLATGSAAGFGVSKDLKDTYIALIEFDSTDPVDKFFSKGYASASLLLF 156

Query: 150 AFICSAIVSVLSSLALIKKPV 165
           AF+  A++SV SSLAL K+PV
Sbjct: 157 AFVSLAVLSVFSSLALSKRPV 175

[Close]

BLAST of CsaV3_5G026550 vs. TAIR10
Match: AT2G39518.1 (Uncharacterised protein family (UPF0497))

HSP 1 Score: 72.0 bits (175), Expect = 3.8e-13
Identity = 51/154 (33.12%), Postives = 80/154 (51.95%), Query Frame = 0


Query: 15  ILTFIXXXXXXXXXXTNTKTVYKYTVNEHKVKFSDVNSYRYVVAATVIGGALCLLQIAFN 74
           +LT +          TN+ T+     +  K  F DV +YRY+++A VIG    ++Q+ F 
Sbjct: 22  VLTGVFLVIALIILSTNSVTIVSQG-SALKFHFKDVYAYRYMLSAAVIGLVYAVIQLFFT 81

Query: 75  IYHLVTKAEGTPLFY---MFSDQLLTYLLLSAASAGLGSGIDLRANIKVLV---DGDDYS 134
           I    T  +  P  Y    + D+L++YL+ + ++AG G   DL+     LV     D   
Sbjct: 82  ISEFATGVK-NPFNYQLDFYGDKLISYLVATGSAAGFGVTKDLKDTFLALVALDSTDPVD 141

Query: 135 SFFDKGNAGSAILFLAFICSAIVSVLSSLALIKK 163
            FF KG A +++L  AFIC A++SV SS A+ K+
Sbjct: 142 KFFSKGYASASLLLFAFICLAVLSVFSSFAMAKR 173

[Close]

BLAST of CsaV3_5G026550 vs. Swiss-Prot
Match: sp|B9SXY8|CSPLE_RICCO (CASP-like protein 4D1 OS=Ricinus communis OX=3988 GN=RCOM_1206790 PE=3 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 6.2e-21
Identity = 63/161 (39.13%), Postives = 99/161 (61.49%), Query Frame = 0


Query: 7   RIASVILRILTFIXXXXXXXXXXTNTKTVYKYTVNEHKVKFSDVNSYRYVVAATVIGGAL 66
           R+A++ILRILTFI          TNT T+ +  + E KV F DV +YRY++A  VIG A 
Sbjct: 11  RMAALILRILTFIFLIASLVILTTNTATL-ELDLVEVKVHFKDVYAYRYMLATIVIGLAY 70

Query: 67  CLLQIAFNIYHLVT-----KAEGTPLFYMFSDQLLTYLLLSAASAGLGSGIDLRANIKVL 126
            +LQIAF +Y++ T       +G   F  F D++++Y+L++ A+AG  S  D++    V 
Sbjct: 71  TVLQIAFTLYYVATGNRMMSGDGNLAFDFFGDKVISYILVTGAAAGFASTKDIK---PVF 130

Query: 127 VDGDDYSSFFDKGNAGSAILFLAFICSAIVSVLSSLALIKK 163
               D+ +F +KG A +++L + F+C+A++SV SS AL K+
Sbjct: 131 SGSGDFDAFINKGYASASLLLIGFVCTAVLSVFSSYALPKQ 167

[Close]

BLAST of CsaV3_5G026550 vs. Swiss-Prot
Match: sp|A1XGB4|PIMP1_CAPAN (CASP-like protein PIMP1 OS=Capsicum annuum OX=4072 GN=PIMP1 PE=2 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 1.5e-14
Identity = 57/157 (36.31%), Postives = 83/157 (52.87%), Query Frame = 0


Query: 10  SVILRILTFIXXXXXXXXXXTNTKTVYKYTVNEHKVKFSDVNSYRYVVAATVIGGALCLL 69
           S+I+RILT I          TN +TV      + K+KF D  +YRY++A  +IG A  LL
Sbjct: 14  SLIVRILTLICLLISFIVIATNNQTV-STVAGDVKIKFKDFYAYRYLIATVIIGMAYTLL 73

Query: 70  QIAFNIYHLVT----KAEGTPLFYMFSDQLLTYLLLSAASAGLGSGIDLRANIKVLVDGD 129
           QIAF+I  L T      EG  LF  + D+ ++Y L++ A+A  G   DL    K L   D
Sbjct: 74  QIAFSISLLTTGNRIGGEGFLLFDFYGDKFISYFLVTGAAASFGMTQDL----KQLEGSD 133

Query: 130 DYSSFFDKGNAGSAILFLAFICSAIVSVLSSLALIKK 163
           +YS F +  NA +++  + F  +   S+ SS  L K+
Sbjct: 134 NYSKFLNTSNAAASLCLIGFFFAVASSIFSSYNLPKR 165

[Close]

BLAST of CsaV3_5G026550 vs. Swiss-Prot
Match: sp|B9NBE5|CSPLL_POPTR (CASP-like protein 4D1 OS=Populus trichocarpa OX=3694 GN=POPTR_0010s21230g PE=2 SV=2)

HSP 1 Score: 80.5 bits (197), Expect = 1.9e-14
Identity = 52/139 (37.41%), Postives = 83/139 (59.71%), Query Frame = 0


Query: 30  TNTKTVYKYTVNEHKVKFSDVNSYRYVVAATVIGGALCLLQIAFNIYHL------VTKAE 89
           TNT T+ +  ++E KV+  D  SYRY++AA   G    +LQIA  + H+       T  +
Sbjct: 43  TNTGTI-EIGIDEFKVRSKDFYSYRYMLAAIAFGLTYTILQIALTLNHISKRNGAQTSGD 102

Query: 90  GTPLFYMFSDQLLTYLLLSAASAGLGSGIDLRANIKVLVDGDDYSSFFDKGNAGSAILFL 149
           G  +F  + D++++Y+L + A+A  G+  +L+  +  L  G D   FF+KG A +++L L
Sbjct: 103 GNLVFDFYGDKVVSYILATGAAAAFGATKELKTQLAGL--GGD--KFFNKGYASASLLLL 162

Query: 150 AFICSAIVSVLSSLALIKK 163
            F+C+AI+SV SS AL KK
Sbjct: 163 GFVCTAILSVFSSYALPKK 176

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BLAST of CsaV3_5G026550 vs. Swiss-Prot
Match: sp|C6T1Z6|CSPLC_SOYBN (CASP-like protein 4D1 OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 4.3e-14
Identity = 62/168 (36.90%), Postives = 101/168 (60.12%), Query Frame = 0


Query: 2   ASKGLRIASVILRILTFIXXXXXXXXXXTNTKTVYKYTVNEH--KVKFSDVNSYRYVVAA 61
           +S G R   ++LR+LT     XXXXXXX     + K T +E   ++KF+D+ +YRY+++ 
Sbjct: 13  SSTGSRTVLLLLRVLT-----XXXXXXXXXXXAIVKQTDDETGVEIKFNDIYAYRYMIST 72

Query: 62  TVIGGALCLLQIAFNIYHLVT-----KAEGTPLFYMFSDQLLTYLLLSAASAGLGSGIDL 121
            +IG A  LLQ+A +I+ +V+       +G  LF  F D++++YLL+S ++AG G  ++L
Sbjct: 73  IIIGFAYNLLQMALSIFTVVSGNRVLSGDGGYLFDFFGDKIISYLLISGSAAGFGVTVEL 132

Query: 122 RANIKVLVDGDDYSSFFDKGNAGSAILFLAFICSAIVSVLSSLALIKK 163
                    G   +SF DK NA +++L +AF+ +A+ S  +S AL KK
Sbjct: 133 GR-------GVPSNSFMDKANASASLLLIAFLFTAVASTFTSFALPKK 168

[Close]

BLAST of CsaV3_5G026550 vs. Swiss-Prot
Match: sp|D7LD60|CSPLK_ARALL (CASP-like protein 4D1 OS=Arabidopsis lyrata subsp. lyrata OX=81972 GN=ARALYDRAFT_903205 PE=3 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 7.4e-14
Identity = 53/143 (37.06%), Postives = 85/143 (59.44%), Query Frame = 0


Query: 30  TNTKTVYKYTVNEHKVKFSDVNSYRYVVAATVIGGALCLLQIAFNIYHLVTKAEGT--PL 89
           TNT T+ + +    K++F+DV +YRY+++A VIG    ++Q+   I    T   GT  PL
Sbjct: 37  TNTVTL-EVSSTSIKMRFNDVYAYRYMLSAAVIGLLYAVVQLFLTISQFAT---GTTHPL 96

Query: 90  FYMFS---DQLLTYLLLSAASAGLGSGIDLRANIKVLVD---GDDYSSFFDKGNAGSAIL 149
            Y F+   D++++YLL + ++AG G   DL+     L++    D    FF KG A +++L
Sbjct: 97  NYQFNFYGDKIISYLLATGSAAGFGVSKDLKETFLALIEFDSTDPVDKFFSKGYASASLL 156

Query: 150 FLAFICSAIVSVLSSLALIKKPV 165
             AF+  A++SV SSLAL K+P+
Sbjct: 157 LFAFVSLAVLSVFSSLALSKRPI 175

[Close]

BLAST of CsaV3_5G026550 vs. TrEMBL
Match: tr|A0A0A0KS88|A0A0A0KS88_CUCSA (CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_5G515020 PE=3 SV=1)

HSP 1 Score: 285.0 bits (728), Expect = 1.1e-73
Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 0


Query: 1   MASKGLRIASVILRILTFIXXXXXXXXXXTNTKTVYKYTVNEHKVKFSDVNSYRYVVAAT 60
           MASKGLRIASVILRILTFIXXXXXXXXXXTNTKTVYKYTVNEHKVKFSDVNSYRYVVAAT
Sbjct: 1   MASKGLRIASVILRILTFIXXXXXXXXXXTNTKTVYKYTVNEHKVKFSDVNSYRYVVAAT 60

Query: 61  VIGGALCLLQIAFNIYHLVTKAEGTPLFYMFSDQLLTYLLLSAASAGLGSGIDLRANIKV 120
           VIGGALCLLQIAFNIYHLVTKAEGTPLFYMFSDQLLTYLLLSAASAGLGSGIDLRANIKV
Sbjct: 61  VIGGALCLLQIAFNIYHLVTKAEGTPLFYMFSDQLLTYLLLSAASAGLGSGIDLRANIKV 120

Query: 121 LVDGDDYSSFFDKGNAGSAILFLAFICSAIVSVLSSLALIKKPV 165
           LVDGDDYSSFFDKGNAGSAILFLAFICSAIVSVLSSLALIKKPV
Sbjct: 121 LVDGDDYSSFFDKGNAGSAILFLAFICSAIVSVLSSLALIKKPV 164

[Close]

BLAST of CsaV3_5G026550 vs. TrEMBL
Match: tr|A0A0A0KNU7|A0A0A0KNU7_CUCSA (CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_5G515030 PE=3 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 2.8e-50
Identity = 117/162 (72.22%), Postives = 131/162 (80.86%), Query Frame = 0


Query: 1   MASKGLRIASVILRILTFIXXXXXXXXXXTNTKTV-YKYTVNEHKVKFSDVNSYRYVVAA 60
           MASKGLRIAS+ILR LTFI          TN+KTV    TV E KVKF++V SYRY+VA 
Sbjct: 1   MASKGLRIASLILRNLTFILTFISLLIVATNSKTVLIDGTVGEVKVKFNNVASYRYLVAT 60

Query: 61  TVIGGALCLLQIAFNIYHLVTKAEGTPLFYMFSDQLLTYLLLSAASAGLGSGIDLRANIK 120
            VIGGAL LLQI FNIYHL+T  EGTPLFYMFSDQLLTYLLLS ASAGLG+GIDLR NIK
Sbjct: 61  AVIGGALSLLQIVFNIYHLITNGEGTPLFYMFSDQLLTYLLLSGASAGLGAGIDLRVNIK 120

Query: 121 VLVDGDDYSSFFDKGNAGSAILFLAFICSAIVSVLSSLALIK 162
            L++G  ++SFFDK NAGSAIL LAF+C+AIVSVLSSLALI+
Sbjct: 121 ELLEGTYFNSFFDKANAGSAILLLAFVCAAIVSVLSSLALIR 162

[Close]

BLAST of CsaV3_5G026550 vs. TrEMBL
Match: tr|A0A1S3C911|A0A1S3C911_CUCME (CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103498157 PE=3 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 8.4e-31
Identity = 80/162 (49.38%), Postives = 109/162 (67.28%), Query Frame = 0


Query: 2   ASKGLRIASVILRILTFIXXXXXXXXXXTNTKTVYKYTVNEHKVKFSDVNSYRYVVAATV 61
           A    +IAS +LR+LTF+          TN+K     T+   +V F +VNSYRY +A  +
Sbjct: 3   AKMATKIASFVLRVLTFVFLLVSIIVLGTNSK-----TIGNDEVHFHNVNSYRYAMATII 62

Query: 62  IGGALCLLQIAFNIYHLVTKAEGTPLFYMFSDQLLTYLLLSAASAGLGSGIDLRANIKVL 121
           IGGA  LLQIA  +Y LVTK +G+ LF  + D++L+Y LL+ A+A LGS +DL+AN+ +L
Sbjct: 63  IGGAFNLLQIALALYRLVTKTDGSILFDFYGDKVLSYFLLAGAAAALGSSVDLKANMDML 122

Query: 122 VDGDDYSSFFDKGNAGSAILFLAFICSAIVSVLSSLALIKKP 164
                 +SFFD+GNA +A+L LAF+CSAI+SVLSSLAL  KP
Sbjct: 123 ------NSFFDQGNAAAALLLLAFLCSAIISVLSSLALSNKP 153

[Close]

BLAST of CsaV3_5G026550 vs. TrEMBL
Match: tr|A0A0A0KU83|A0A0A0KU83_CUCSA (CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_5G515010 PE=3 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 2.9e-23
Identity = 72/161 (44.72%), Postives = 99/161 (61.49%), Query Frame = 0


Query: 3   SKGLRIASVILRILTFIXXXXXXXXXXTNTKTVYKYTVNEHKVKFSDVNSYRYVVAATVI 62
           S G RI S+ILRILTF+          T ++TV  Y     K+ F+D + +RY++A  +I
Sbjct: 4   SSGSRITSLILRILTFVFLFISFFILITTSQTVRPY-----KLHFNDYHGFRYMLATIII 63

Query: 63  GGALCLLQIAFNIYHLVTKAEGTPLFYMFSDQLLTYLLLSAASAGLGSGIDLRANIKVLV 122
           G    LLQIAF+++++V   +GT LF  F D+ L+YLL + A+AG G G+DL+      V
Sbjct: 64  GLVFNLLQIAFSLFNIVKNGDGTILFDFFGDKFLSYLLATGAAAGFGVGVDLKK-----V 123

Query: 123 DGDD-YSSFFDKGNAGSAILFLAFICSAIVSVLSSLALIKK 163
           D DD +  FFDK  A S +L  AF CSA VS+LSS AL K+
Sbjct: 124 DPDDLFRIFFDKAYAASTLLLFAFFCSAAVSILSSFALSKR 154

[Close]

BLAST of CsaV3_5G026550 vs. TrEMBL
Match: tr|A0A1S3C9H1|A0A1S3C9H1_CUCME (CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103498162 PE=3 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 8.4e-23
Identity = 70/161 (43.48%), Postives = 99/161 (61.49%), Query Frame = 0


Query: 3   SKGLRIASVILRILTFIXXXXXXXXXXTNTKTVYKYTVNEHKVKFSDVNSYRYVVAATVI 62
           S G R+ S+ILRILTF+          T ++TV  Y     K+ F+  + +RY++A  +I
Sbjct: 4   SSGSRVTSLILRILTFVFLFISFFILITTSQTVRPY-----KLHFNSYHGFRYMLATIII 63

Query: 63  GGALCLLQIAFNIYHLVTKAEGTPLFYMFSDQLLTYLLLSAASAGLGSGIDLRANIKVLV 122
           G    LLQIAF+++++V   +GT LF  F D+ L+YLL + A+AG G G+DL+       
Sbjct: 64  GLVFNLLQIAFSLFNIVKNGDGTILFDFFGDKFLSYLLATGAAAGFGVGVDLKKK----- 123

Query: 123 DGDD-YSSFFDKGNAGSAILFLAFICSAIVSVLSSLALIKK 163
           D DD + +FFDK  A SA+L  AF CSA VS+LSS AL K+
Sbjct: 124 DPDDLFRTFFDKAYAASALLLFAFFCSAAVSILSSFALSKR 154

The following BLAST results are available for this feature:

BLAST of CsaV3_5G026550 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004142753.1	1.6e-73	100.00	PREDICTED: CASP-like protein 4D1 [Cucumis sativus] >KGN51297.1 hypothetical prot...	[more]
KGN51298.1	4.2e-50	72.22	hypothetical protein Csa_5G515030 [Cucumis sativus]	[more]
XP_022134193.1	2.8e-46	66.67	CASP-like protein 4D1 [Momordica charantia]	[more]
XP_022963262.1	2.5e-42	65.43	CASP-like protein 4D1 [Cucurbita moschata]	[more]
XP_022990642.1	1.2e-41	62.73	CASP-like protein 4D1 [Cucurbita maxima]	[more]

BLAST of CsaV3_5G026550 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G39530.1	9.1e-15	36.88	Uncharacterised protein family (UPF0497)	[more]
AT2G39518.1	3.8e-13	33.12	Uncharacterised protein family (UPF0497)	[more]

BLAST of CsaV3_5G026550 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|B9SXY8\|CSPLE_RICCO	6.2e-21	39.13	CASP-like protein 4D1 OS=Ricinus communis OX=3988 GN=RCOM_1206790 PE=3 SV=1	[more]
sp\|A1XGB4\|PIMP1_CAPAN	1.5e-14	36.31	CASP-like protein PIMP1 OS=Capsicum annuum OX=4072 GN=PIMP1 PE=2 SV=1	[more]
sp\|B9NBE5\|CSPLL_POPTR	1.9e-14	37.41	CASP-like protein 4D1 OS=Populus trichocarpa OX=3694 GN=POPTR_0010s21230g PE=2 S...	[more]
sp\|C6T1Z6\|CSPLC_SOYBN	4.3e-14	36.90	CASP-like protein 4D1 OS=Glycine max OX=3847 PE=2 SV=1	[more]
sp\|D7LD60\|CSPLK_ARALL	7.4e-14	37.06	CASP-like protein 4D1 OS=Arabidopsis lyrata subsp. lyrata OX=81972 GN=ARALYDRAFT...	[more]

BLAST of CsaV3_5G026550 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KS88\|A0A0A0KS88_CUCSA	1.1e-73	100.00	CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_5G515020 PE=3 SV=1	[more]
tr\|A0A0A0KNU7\|A0A0A0KNU7_CUCSA	2.8e-50	72.22	CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_5G515030 PE=3 SV=1	[more]
tr\|A0A1S3C911\|A0A1S3C911_CUCME	8.4e-31	49.38	CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103498157 PE=3 SV=1	[more]
tr\|A0A0A0KU83\|A0A0A0KU83_CUCSA	2.9e-23	44.72	CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_5G515010 PE=3 SV=1	[more]
tr\|A0A1S3C9H1\|A0A1S3C9H1_CUCME	8.4e-23	43.48	CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103498162 PE=3 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR006459	CASP/CASPL
IPR006702	CASP_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_5G026550.1	CsaV3_5G026550.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006702	Casparian strip membrane protein domain	PFAM	PF04535	DUF588	coord: 4..147 e-value: 3.5E-24 score: 85.2
IPR006459	Casparian strip membrane protein	TIGRFAM	TIGR01569	TIGR01569	coord: 11..156 e-value: 2.0E-11 score: 41.9
None	No IPR available	PANTHER	PTHR11615:SF148	CASP-LIKE PROTEIN 4D1-RELATED	coord: 7..162
None	No IPR available	PANTHER	PTHR11615	NITRATE, FROMATE, IRON DEHYDROGENASE	coord: 7..162

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_5G026550	Cucumber (Chinese Long) v3	cuccucB171
CsaV3_5G026550	Cucumber (Chinese Long) v3	cuccucB196
CsaV3_5G026550	Silver-seed gourd	carcucB0297
CsaV3_5G026550	Silver-seed gourd	carcucB0724
CsaV3_5G026550	Cucumber (Gy14) v2	cgybcucB183
CsaV3_5G026550	Cucumber (Gy14) v2	cgybcucB232
CsaV3_5G026550	Cucumber (Gy14) v2	cgybcucB234
CsaV3_5G026550	Cucumber (Gy14) v1	cgycucB058
CsaV3_5G026550	Cucumber (Gy14) v1	cgycucB265
CsaV3_5G026550	Cucumber (Gy14) v1	cgycucB300
CsaV3_5G026550	Cucurbita maxima (Rimu)	cmacucB0354
CsaV3_5G026550	Cucurbita maxima (Rimu)	cmacucB0899
CsaV3_5G026550	Cucurbita maxima (Rimu)	cmacucB0806
CsaV3_5G026550	Cucurbita maxima (Rimu)	cmacucB0862
CsaV3_5G026550	Cucurbita maxima (Rimu)	cmacucB0892
CsaV3_5G026550	Cucurbita maxima (Rimu)	cmacucB1031
CsaV3_5G026550	Cucurbita moschata (Rifu)	cmocucB0349
CsaV3_5G026550	Cucurbita moschata (Rifu)	cmocucB0790
CsaV3_5G026550	Cucurbita moschata (Rifu)	cmocucB0848
CsaV3_5G026550	Cucurbita moschata (Rifu)	cmocucB0882
CsaV3_5G026550	Cucurbita moschata (Rifu)	cmocucB0887
CsaV3_5G026550	Cucurbita moschata (Rifu)	cmocucB1016
CsaV3_5G026550	Cucurbita pepo (Zucchini)	cpecucB0091
CsaV3_5G026550	Cucurbita pepo (Zucchini)	cpecucB0211
CsaV3_5G026550	Cucurbita pepo (Zucchini)	cpecucB0519
CsaV3_5G026550	Cucurbita pepo (Zucchini)	cpecucB0550
CsaV3_5G026550	Cucurbita pepo (Zucchini)	cpecucB0551
CsaV3_5G026550	Cucurbita pepo (Zucchini)	cpecucB0616
CsaV3_5G026550	Wild cucumber (PI 183967)	cpicucB231
CsaV3_5G026550	Wild cucumber (PI 183967)	cpicucB284
CsaV3_5G026550	Wild cucumber (PI 183967)	cpicucB292
CsaV3_5G026550	Bottle gourd (USVL1VR-Ls)	cuclsiB366
CsaV3_5G026550	Bottle gourd (USVL1VR-Ls)	cuclsiB370
CsaV3_5G026550	Bottle gourd (USVL1VR-Ls)	cuclsiB390
CsaV3_5G026550	Melon (DHL92) v3.5.1	cucmeB359
CsaV3_5G026550	Melon (DHL92) v3.5.1	cucmeB377
CsaV3_5G026550	Melon (DHL92) v3.5.1	cucmeB422
CsaV3_5G026550	Melon (DHL92) v3.6.1	cucmedB351
CsaV3_5G026550	Melon (DHL92) v3.6.1	cucmedB367
CsaV3_5G026550	Melon (DHL92) v3.6.1	cucmedB415
CsaV3_5G026550	Watermelon (Charleston Gray)	cucwcgB362
CsaV3_5G026550	Watermelon (Charleston Gray)	cucwcgB409
CsaV3_5G026550	Watermelon (Charleston Gray)	cucwcgB425
CsaV3_5G026550	Watermelon (97103) v1	cucwmB419
CsaV3_5G026550	Watermelon (97103) v1	cucwmB450
CsaV3_5G026550	Watermelon (97103) v1	cucwmB387
CsaV3_5G026550	Watermelon (97103) v2	cucwmbB388
CsaV3_5G026550	Watermelon (97103) v2	cucwmbB412
CsaV3_5G026550	Watermelon (97103) v2	cucwmbB424