CsaV3_5G026110 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGGCCATTCCATCTTCCTCACTACAATTCCCTAACTCTCTCACACTTCCTTCCAATTCAAAGCCTCCCAAGCCCAAGCTTCTCACCTTCCTAACCAGGGCAGCAGATCCGGAATCTCCCGCCGGCGATTCTGAACAACCTGGATCTGACGGCGACGATTTCGAGGACCGACTCGCCAAAGTCCGAATCCGATACCGAAGCGGAACAGGAAAGAAGGCAGAGATACGGAAGGCTCGCAAGTCCAAGCAAGGTTCTACCACTGCCGCCTCGTCGGTGTACCTACCGCCAGTGTCTCTGAAGGAGGCGGTTTCCGGGGGACTTAAAGTGGAATTCGGATTTAGTCCGTACAGCGAGAGGATCAATGGTTGGATTGCGATACTCGGAATATCGGCGTTGGTTCTTGTGGAATTGGCTACCGGAAAAAGCGTCATCAGTTATCATACGCCGGCGATTATACTGATTCAAGTGTATTTTGTGGCGGCGGTTGCTGCGGTGTATATCAAATACGAGAAGGAGAAGGTTAGCGTTTGGCCGTCGGATGAAATCAAAAGTTAGAATGAAGCTTTGTTTAATAAATTCAGTAATTTTTTGGGATGATTTTCATTTTCTGTTTCTGAATTTCTACATTAATTTTGAGTTATGTATGAATGAACACTAGAACTAGAAATAATGTGCAGTGGTTCAAGTGTTTAATTTAACTAAAATCAATTCTTTTAACTATAATTTCCATACCATTTCTAAAATCAAAATATTTTAACCGTTCAAAGCTAATTTTGATATATGAAAATCAAAATAAAAAGTGTATCAGTTGCATAATAAATTAATTAACTATCAAACATGCCTTGCAACTGATTTGAACTTCTTTCTAACATTAGTTCAATTGTTTTGGGGAATTTTGGGTAATAAGAATGTAAGTTCATCTAATGTGAAGCAGCCAATTGTAAGCAAAAGAGGAAAACATAAGATACAAATCCGTAAAAGGACTTTGATAGGCTTTTCTTTTTCTTCCATTCATTTTCTCCTCTTTGCTCCAAATAGTAGGTGATGAAGGCATTTTTCTCTCTTCTTTTTTACATCTCTTTAGATACCATCAGTTTCTAAAGCTAATCGTCTTCTTCTTCTTTCTTCTCTTTCTGACTCCTTTTCTCTCTCAATCATGATATTCACAACTAATAAGTAGTAAAGAAGAGCTGCTAGCAGATCATTCAAGATCTCATTCAAAAGAATCTTTCTGCTCCTTTTGTTTTGAGTCTGATCTTTCTTTCTTCAACTCTATTACATTTCTTCTATTAAGTTGCTTCGCTTCTTCATCATGTCTTCTCTATATCTTCTTCTCTCATCTTTCTTCCTCTTTCTCATTTTACAATTAACTCTCGCTCCTTCTATCCTTTCGTCCTACTTCTCTCCAACACGATCAAGCTTCTTTGCCCATCTCTTCTTCCTCTGGTCTCTCTATTCAAACCTCTATTTCTAAGTAGTAGAACGTGCCATCACCTACAACCCTTTCTTTCCTCTGTCGAGGACTTCCACAAAATGAAAAGGGGTGACATCGTCGTATGCTCCAACATTTTTTGCTCTAGTTTATATCTCGGATTATTGCTATGATTGATCTGTCATCCAATCTACTTAAAGAATTGTCAGACTTGGCCCCGTGCCATTTGGAGAATGAGCCTATATATAGGCATGGATGA ATGGCGGCCATTCCATCTTCCTCACTACAATTCCCTAACTCTCTCACACTTCCTTCCAATTCAAAGCCTCCCAAGCCCAAGCTTCTCACCTTCCTAACCAGGGCAGCAGATCCGGAATCTCCCGCCGGCGATTCTGAACAACCTGGATCTGACGGCGACGATTTCGAGGACCGACTCGCCAAAGTCCGAATCCGATACCGAAGCGGAACAGGAAAGAAGGCAGAGATACGGAAGGCTCGCAAGTCCAAGCAAGGTTCTACCACTGCCGCCTCGTCGGTGTACCTACCGCCAGTGTCTCTGAAGGAGGCGGTTTCCGGGGGACTTAAAGTGGAATTCGGATTTAGTCCGTACAGCGAGAGGATCAATGGTTGGATTGCGATACTCGGAATATCGGCGTTGGTTCTTGTGGAATTGGCTACCGGAAAAAGCGTCATCAGTTATCATACGCCGGCGATTATACTGATTCAAGTGTATTTTGTGGCGGCGGTTGCTGCGGTGTATATCAAATACGAGAAGGAGAAGTTTATATCTCGGATTATTGCTATGATTGATCTGTCATCCAATCTACTTAAAGAATTGTCAGACTTGGCCCCGTGCCATTTGGAGAATGAGCCTATATATAGGCATGGATGA ATGGCGGCCATTCCATCTTCCTCACTACAATTCCCTAACTCTCTCACACTTCCTTCCAATTCAAAGCCTCCCAAGCCCAAGCTTCTCACCTTCCTAACCAGGGCAGCAGATCCGGAATCTCCCGCCGGCGATTCTGAACAACCTGGATCTGACGGCGACGATTTCGAGGACCGACTCGCCAAAGTCCGAATCCGATACCGAAGCGGAACAGGAAAGAAGGCAGAGATACGGAAGGCTCGCAAGTCCAAGCAAGGTTCTACCACTGCCGCCTCGTCGGTGTACCTACCGCCAGTGTCTCTGAAGGAGGCGGTTTCCGGGGGACTTAAAGTGGAATTCGGATTTAGTCCGTACAGCGAGAGGATCAATGGTTGGATTGCGATACTCGGAATATCGGCGTTGGTTCTTGTGGAATTGGCTACCGGAAAAAGCGTCATCAGTTATCATACGCCGGCGATTATACTGATTCAAGTGTATTTTGTGGCGGCGGTTGCTGCGGTGTATATCAAATACGAGAAGGAGAAGTTTATATCTCGGATTATTGCTATGATTGATCTGTCATCCAATCTACTTAAAGAATTGTCAGACTTGGCCCCGTGCCATTTGGAGAATGAGCCTATATATAGGCATGGATGA MAAIPSSSLQFPNSLTLPSNSKPPKPKLLTFLTRAADPESPAGDSEQPGSDGDDFEDRLAKVRIRYRSGTGKKAEIRKARKSKQGSTTAASSVYLPPVSLKEAVSGGLKVEFGFSPYSERINGWIAILGISALVLVELATGKSVISYHTPAIILIQVYFVAAVAAVYIKYEKEKFISRIIAMIDLSSNLLKELSDLAPCHLENEPIYRHG
BLAST of CsaV3_5G026110 vs. NCBI nr
Match: XP_004149820.1 (PREDICTED: uncharacterized protein LOC101221723 [Cucumis sativus] >KGN51252.1 hypothetical protein Csa_5G505130 [Cucumis sativus]) HSP 1 Score: 324.3 bits (830), Expect = 3.0e-85 Identity = 174/174 (100.00%), Postives = 174/174 (100.00%), Query Frame = 0
BLAST of CsaV3_5G026110 vs. NCBI nr
Match: XP_008463533.1 (PREDICTED: uncharacterized protein LOC103501667 [Cucumis melo]) HSP 1 Score: 300.8 bits (769), Expect = 3.6e-78 Identity = 163/174 (93.68%), Postives = 165/174 (94.83%), Query Frame = 0
BLAST of CsaV3_5G026110 vs. NCBI nr
Match: XP_022133568.1 (uncharacterized protein LOC111006119 [Momordica charantia]) HSP 1 Score: 271.6 bits (693), Expect = 2.3e-69 Identity = 150/176 (85.23%), Postives = 160/176 (90.91%), Query Frame = 0
BLAST of CsaV3_5G026110 vs. NCBI nr
Match: XP_023550096.1 (uncharacterized protein LOC111808391 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 270.4 bits (690), Expect = 5.2e-69 Identity = 150/174 (86.21%), Postives = 158/174 (90.80%), Query Frame = 0
BLAST of CsaV3_5G026110 vs. NCBI nr
Match: XP_022938525.1 (uncharacterized protein LOC111444734 [Cucurbita moschata]) HSP 1 Score: 266.9 bits (681), Expect = 5.7e-68 Identity = 151/175 (86.29%), Postives = 159/175 (90.86%), Query Frame = 0
BLAST of CsaV3_5G026110 vs. TAIR10
Match: AT3G12345.1 (unknown protein) HSP 1 Score: 174.9 bits (442), Expect = 5.4e-44 Identity = 97/172 (56.40%), Postives = 126/172 (73.26%), Query Frame = 0
BLAST of CsaV3_5G026110 vs. TrEMBL
Match: tr|A0A0A0KS45|A0A0A0KS45_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G505130 PE=4 SV=1) HSP 1 Score: 324.3 bits (830), Expect = 2.0e-85 Identity = 174/174 (100.00%), Postives = 174/174 (100.00%), Query Frame = 0
BLAST of CsaV3_5G026110 vs. TrEMBL
Match: tr|A0A1S3CJX9|A0A1S3CJX9_CUCME (uncharacterized protein LOC103501667 OS=Cucumis melo OX=3656 GN=LOC103501667 PE=4 SV=1) HSP 1 Score: 300.8 bits (769), Expect = 2.4e-78 Identity = 163/174 (93.68%), Postives = 165/174 (94.83%), Query Frame = 0
BLAST of CsaV3_5G026110 vs. TrEMBL
Match: tr|A0A2I4F8R7|A0A2I4F8R7_9ROSI (uncharacterized protein LOC108996544 OS=Juglans regia OX=51240 GN=LOC108996544 PE=4 SV=1) HSP 1 Score: 199.9 bits (507), Expect = 5.7e-48 Identity = 115/184 (62.50%), Postives = 139/184 (75.54%), Query Frame = 0
BLAST of CsaV3_5G026110 vs. TrEMBL
Match: tr|A0A2R6RTV0|A0A2R6RTV0_ACTCH (Beta-glucosidase btgE OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc03845 PE=4 SV=1) HSP 1 Score: 199.5 bits (506), Expect = 7.4e-48 Identity = 111/179 (62.01%), Postives = 137/179 (76.54%), Query Frame = 0
BLAST of CsaV3_5G026110 vs. TrEMBL
Match: tr|A0A1S2Y2A1|A0A1S2Y2A1_CICAR (uncharacterized protein LOC101502650 OS=Cicer arietinum OX=3827 GN=LOC101502650 PE=4 SV=1) HSP 1 Score: 197.6 bits (501), Expect = 2.8e-47 Identity = 112/180 (62.22%), Postives = 138/180 (76.67%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |