CsaV3_5G025920 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_5G025920
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	Elongation factor 1-alpha
Location	chr5 : 21091875 .. 21093311 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTAAGGAAAAGACTCACATCAACATTGTGGTCATTGGTCATGTCGACTCTGGCAAGTCGACCACTACTGGCCATTTGATTTACAAGCTTGGAGGTATTGACAAGCGTGTTATTGAGAGGTTTGAGAAGGAAGCTGCTGAGATGAACAAGAGATCGTTCAAGTATGCCTGGGTGTTGGACAAACTGAAGGCCGAACGTGAGCGTGGTATCACAATTGATATTCCTCTGTGGAAGTTCGAGACCACCAAGTATTACTGCACTGTGATTGATGCTCCTGGGCATCGTGATTTCATCAAGAACATGATTACTGGTACTTCCCAGGCTGACTGTGCTGTTCTTATTATCGACTCCACTACTGGAGGTTTTGAAGCTGGTATTTCTAAGGATGGGCAGACCCGTGAACACGCCCTTCTTGCATTTACCCTTGGTGTCAAGCAAATGATTTGCTGCTGTAACAAGGTGATAATGTTTATAGTCAATCCCGATTCTTTAGTATTCTGGTTTTTTCGTGTTTTGTTACTTACTGACTTGGCTATTTATGTGACAGATGGATGCCACCACGCCCAAGTACTCGAAATCTAGGTACGATGAAATTGTGAAGGAAGTTTCTTCCTACCTCAAGAAGGTTGGCTACAACCCAGAAAAAATTCCCTTCGTCCCCATCTCTGGCTTTGAGGGTGACAACATGATTGAAAGATCCACCAACCTCGACTGGTACAAGGACCGACCCTTCTTGAGGCTCTCGATCTGATCCAAGAGCCTAAGAGGCCATCTGACAAACCCCTTCGTCTTCCACTTCAGGATGTCTACAAGATTGGAGGTATTGGAACTGTTCCAGTGGGTCGTGTTGAAACTGGCATTATAAAGCCTGGTATGGTGGTAACCTTTGCTCCATCTGGACTGACTACTGAAGTTAAGTCTGTGGAGATGCACCACGAAGCTCTCCAAGAAGCTCTCCCTGGTGACAACGTGGGGTTCAACGTGAAGAATGTTGCTGTGAAGGATCTCAAGCGTGGTTATGTTGCCTCAAATTCCAAGGATGATCCTGCCAAGGAAGCTGCCAATTTCACGTCCCAAGTTATCATCATGAACCATCCAGGACAGATTGGAAATGGTTATGCACCTGTACTCGATTGCCACACATCTCACATTGCTGTCAAATTTGCCGAGATTTTAACTAAGATTGACAGGCGATCTGGTAAAGAACTGGAGAAAGAGCCCAAGTTTTTGAAGAACGGAGATGCTGGATTTGTTAAGATGATTCCCACCAAGCCCATGGTGGTAGAAACATTCTCTGCGTATCCCCCTCTTGGACGATTTGCCGTGAGGGACATGCGTCAAACTGTGGCTGTTGGTGTCATCAAGGCCGTTGAGAAGAAGGATGCATCCGGCGCCAAGGTCACCAAGTCTGCAGCAAAGAAATCAGGGAAGTGA

mRNA sequence

ATGGGTAAGGAAAAGACTCACATCAACATTGTGGTCATTGGTCATGTCGACTCTGGCAAGTCGACCACTACTGGCCATTTGATTTACAAGCTTGGAGGTATTGACAAGCGTGTTATTGAGAGGTTTGAGAAGGAAGCTGCTGAGATGAACAAGAGATCGTTCAAGTATGCCTGGGTGTTGGACAAACTGAAGGCCGAACGTGAGCGTGGTATCACAATTGATATTCCTCTGTGGAAGTTCGAGACCACCAAGTATTACTGCACTGTGATTGATGCTCCTGGGCATCGTGATTTCATCAAGAACATGATTACTGGTACTTCCCAGGCTGACTGTGCTGTTCTTATTATCGACTCCACTACTGGAGGTTTTGAAGCTGGTATTTCTAAGGATGGGCAGACCCGTGAACACGCCCTTCTTGCATTTACCCTTGGTGTCAAGCAAATGATTTGCTGCTGTAACAAGATGGATGCCACCACGCCCAAGTACTCGAAATCTAGGTACGATGAAATTGTGAAGGAAGTTTCTTCCTACCTCAAGAAGATCCACCAACCTCGACTGGTACAAGGACCGACCCTTCTTGAGGCTCTCGATCTGATCCAAGAGCCTAAGAGGCCATCTGACAAACCCCTTCGTCTTCCACTTCAGGATGTCTACAAGATTGGAGGTATTGGAACTGTTCCAGTGGGTCGTGTTGAAACTGGCATTATAAAGCCTGGTATGGTGGTAACCTTTGCTCCATCTGGACTGACTACTGAAGTTAAGTCTGTGGAGATGCACCACGAAGCTCTCCAAGAAGCTCTCCCTGGTGACAACGTGGGGTTCAACGTGAAGAATGTTGCTGTGAAGGATCTCAAGCGTGGTTATGTTGCCTCAAATTCCAAGGATGATCCTGCCAAGGAAGCTGCCAATTTCACGTCCCAAGTTATCATCATGAACCATCCAGGACAGATTGGAAATGGTTATGCACCTGTACTCGATTGCCACACATCTCACATTGCTGTCAAATTTGCCGAGATTTTAACTAAGATTGACAGGCGATCTGGTAAAGAACTGGAGAAAGAGCCCAAGTTTTTGAAGAACGGAGATGCTGGATTTGTTAAGATGATTCCCACCAAGCCCATGGTGGTAGAAACATTCTCTGCGTATCCCCCTCTTGGACGATTTGCCGTGAGGGACATGCGTCAAACTGTGGCTGTTGGTGTCATCAAGGCCGTTGAGAAGAAGGATGCATCCGGCGCCAAGGTCACCAAGTCTGCAGCAAAGAAATCAGGGAAGTGA

Coding sequence (CDS)

ATGGGTAAGGAAAAGACTCACATCAACATTGTGGTCATTGGTCATGTCGACTCTGGCAAGTCGACCACTACTGGCCATTTGATTTACAAGCTTGGAGGTATTGACAAGCGTGTTATTGAGAGGTTTGAGAAGGAAGCTGCTGAGATGAACAAGAGATCGTTCAAGTATGCCTGGGTGTTGGACAAACTGAAGGCCGAACGTGAGCGTGGTATCACAATTGATATTCCTCTGTGGAAGTTCGAGACCACCAAGTATTACTGCACTGTGATTGATGCTCCTGGGCATCGTGATTTCATCAAGAACATGATTACTGGTACTTCCCAGGCTGACTGTGCTGTTCTTATTATCGACTCCACTACTGGAGGTTTTGAAGCTGGTATTTCTAAGGATGGGCAGACCCGTGAACACGCCCTTCTTGCATTTACCCTTGGTGTCAAGCAAATGATTTGCTGCTGTAACAAGATGGATGCCACCACGCCCAAGTACTCGAAATCTAGGTACGATGAAATTGTGAAGGAAGTTTCTTCCTACCTCAAGAAGATCCACCAACCTCGACTGGTACAAGGACCGACCCTTCTTGAGGCTCTCGATCTGATCCAAGAGCCTAAGAGGCCATCTGACAAACCCCTTCGTCTTCCACTTCAGGATGTCTACAAGATTGGAGGTATTGGAACTGTTCCAGTGGGTCGTGTTGAAACTGGCATTATAAAGCCTGGTATGGTGGTAACCTTTGCTCCATCTGGACTGACTACTGAAGTTAAGTCTGTGGAGATGCACCACGAAGCTCTCCAAGAAGCTCTCCCTGGTGACAACGTGGGGTTCAACGTGAAGAATGTTGCTGTGAAGGATCTCAAGCGTGGTTATGTTGCCTCAAATTCCAAGGATGATCCTGCCAAGGAAGCTGCCAATTTCACGTCCCAAGTTATCATCATGAACCATCCAGGACAGATTGGAAATGGTTATGCACCTGTACTCGATTGCCACACATCTCACATTGCTGTCAAATTTGCCGAGATTTTAACTAAGATTGACAGGCGATCTGGTAAAGAACTGGAGAAAGAGCCCAAGTTTTTGAAGAACGGAGATGCTGGATTTGTTAAGATGATTCCCACCAAGCCCATGGTGGTAGAAACATTCTCTGCGTATCCCCCTCTTGGACGATTTGCCGTGAGGGACATGCGTCAAACTGTGGCTGTTGGTGTCATCAAGGCCGTTGAGAAGAAGGATGCATCCGGCGCCAAGGTCACCAAGTCTGCAGCAAAGAAATCAGGGAAGTGA

Protein sequence

MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIPLWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKSRYDEIVKEVSSYLKKIHQPRLVQGPTLLEALDLIQEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGIIKPGMVVTFAPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKEAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSAYPPLGRFAVRDMRQTVAVGVIKAVEKKDASGAKVTKSAAKKSGK

Homology

[Close]

BLAST of CsaV3_5G025920 vs. NCBI nr
Match: XP_011655319.1 (PREDICTED: elongation factor 1-alpha-like isoform X1 [Cucumis sativus] >XP_011655320.1 PREDICTED: elongation factor 1-alpha-like isoform X2 [Cucumis sativus] >XP_011655321.1 PREDICTED: elongation factor 1-alpha-like isoform X1 [Cucumis sativus])

HSP 1 Score: 820.5 bits (2118), Expect = 2.7e-234
Identity = 418/449 (93.10%), Postives = 422/449 (93.99%), Query Frame = 0


Query: 1   MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
           MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL
Sbjct: 1   MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60

Query: 61  DKLKAERERGITIDIPLWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120
           DKLKAERERGITIDIPLWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT
Sbjct: 61  DKLKAERERGITIDIPLWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120

Query: 121 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKSRYDEIVKEVSSYLKK 180
           GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKSRYDEIVKEVSSYLKK
Sbjct: 121 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKSRYDEIVKEVSSYLKK 180

Query: 181 I-HQPRLV-----------------------QGPTLLEALDLIQEPKRPSDKPLRLPLQD 240
           + + P  +                       +GPTLLEALDLIQEPKRPSDKPLRLPLQD
Sbjct: 181 VGYNPEKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDLIQEPKRPSDKPLRLPLQD 240

Query: 241 VYKIGGIGTVPVGRVETGIIKPGMVVTFAPSGLTTEVKSVEMHHEALQEALPGDNVGFNV 300
           VYKIGGIGTVPVGRVETGIIKPGMVVTFAPSGLTTEVKSVEMHHEALQEALPGDNVGFNV
Sbjct: 241 VYKIGGIGTVPVGRVETGIIKPGMVVTFAPSGLTTEVKSVEMHHEALQEALPGDNVGFNV 300

Query: 301 KNVAVKDLKRGYVASNSKDDPAKEAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF 360
           KNVAVKDLKRGYVASNSKDDPAKEAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF
Sbjct: 301 KNVAVKDLKRGYVASNSKDDPAKEAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF 360

Query: 361 AEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSAYPPLGRFAVRDMRQT 420
           AEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSAYPPLGRFAVRDMRQT
Sbjct: 361 AEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSAYPPLGRFAVRDMRQT 420

Query: 421 VAVGVIKAVEKKDASGAKVTKSAAKKSGK 426
           VAVGVIKAVEKKDASGAKVTKSAAKKSGK
Sbjct: 421 VAVGVIKAVEKKDASGAKVTKSAAKKSGK 449

[Close]

BLAST of CsaV3_5G025920 vs. NCBI nr
Match: XP_022993452.1 (elongation factor 1-alpha [Cucurbita maxima] >XP_022993453.1 elongation factor 1-alpha [Cucurbita maxima] >XP_022993454.1 elongation factor 1-alpha [Cucurbita maxima] >XP_022993455.1 elongation factor 1-alpha [Cucurbita maxima])

HSP 1 Score: 805.4 bits (2079), Expect = 9.0e-230
Identity = 408/449 (90.87%), Postives = 418/449 (93.10%), Query Frame = 0


Query: 1   MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
           MGKEK HINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL
Sbjct: 1   MGKEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60

Query: 61  DKLKAERERGITIDIPLWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120
           DKLKAERERGITIDI LWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT
Sbjct: 61  DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120

Query: 121 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKSRYDEIVKEVSSYLKK 180
           GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMD+TTPKYSK+RYDEIVKEVSSYLKK
Sbjct: 121 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDSTTPKYSKARYDEIVKEVSSYLKK 180

Query: 181 I-HQPRLV-----------------------QGPTLLEALDLIQEPKRPSDKPLRLPLQD 240
           + + P  +                       +GPTLLEALDLIQEPKRPSDKPLRLPLQD
Sbjct: 181 VGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDLIQEPKRPSDKPLRLPLQD 240

Query: 241 VYKIGGIGTVPVGRVETGIIKPGMVVTFAPSGLTTEVKSVEMHHEALQEALPGDNVGFNV 300
           VYKIGGIGTVPVGRVETG++KPGMVVTFAPSGLTTEVKSVEMHHEALQEALPGDNVGFNV
Sbjct: 241 VYKIGGIGTVPVGRVETGVLKPGMVVTFAPSGLTTEVKSVEMHHEALQEALPGDNVGFNV 300

Query: 301 KNVAVKDLKRGYVASNSKDDPAKEAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF 360
           KNVAVKDLKRGYVASNSKDDPAKEAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF
Sbjct: 301 KNVAVKDLKRGYVASNSKDDPAKEAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF 360

Query: 361 AEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSAYPPLGRFAVRDMRQT 420
           +EILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETF+ YPPLGRFAVRDMRQT
Sbjct: 361 SEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFATYPPLGRFAVRDMRQT 420

Query: 421 VAVGVIKAVEKKDASGAKVTKSAAKKSGK 426
           VAVGVIKAVEKKD SGAKVTKSAAKKSGK
Sbjct: 421 VAVGVIKAVEKKDPSGAKVTKSAAKKSGK 449

[Close]

BLAST of CsaV3_5G025920 vs. NCBI nr
Match: XP_022938687.1 (elongation factor 1-alpha [Cucurbita moschata] >XP_022938688.1 elongation factor 1-alpha [Cucurbita moschata])

HSP 1 Score: 805.1 bits (2078), Expect = 1.2e-229
Identity = 407/449 (90.65%), Postives = 418/449 (93.10%), Query Frame = 0


Query: 1   MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
           MGKEK HINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL
Sbjct: 1   MGKEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60

Query: 61  DKLKAERERGITIDIPLWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120
           DKLKAERERGITIDI LWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT
Sbjct: 61  DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120

Query: 121 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKSRYDEIVKEVSSYLKK 180
           GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMD+TTPKYSK+RYDEIVKEVSSYLKK
Sbjct: 121 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDSTTPKYSKARYDEIVKEVSSYLKK 180

Query: 181 I-HQPRLV-----------------------QGPTLLEALDLIQEPKRPSDKPLRLPLQD 240
           + + P  +                       +GPTLLEALDLIQEPKRPSDKPLRLPLQD
Sbjct: 181 VGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDLIQEPKRPSDKPLRLPLQD 240

Query: 241 VYKIGGIGTVPVGRVETGIIKPGMVVTFAPSGLTTEVKSVEMHHEALQEALPGDNVGFNV 300
           VYKIGGIGTVPVGRVETG++KPGMVVTFAPSGLTTEVKSVEMHHEALQEALPGDNVGFNV
Sbjct: 241 VYKIGGIGTVPVGRVETGVLKPGMVVTFAPSGLTTEVKSVEMHHEALQEALPGDNVGFNV 300

Query: 301 KNVAVKDLKRGYVASNSKDDPAKEAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF 360
           KNVAVKDLKRGYVASNSKDDPAKEAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF
Sbjct: 301 KNVAVKDLKRGYVASNSKDDPAKEAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF 360

Query: 361 AEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSAYPPLGRFAVRDMRQT 420
           +EILTKIDRRSGKELEKEPKFLKNGDAGFVKM+PTKPMVVETF+ YPPLGRFAVRDMRQT
Sbjct: 361 SEILTKIDRRSGKELEKEPKFLKNGDAGFVKMVPTKPMVVETFATYPPLGRFAVRDMRQT 420

Query: 421 VAVGVIKAVEKKDASGAKVTKSAAKKSGK 426
           VAVGVIKAVEKKD SGAKVTKSAAKKSGK
Sbjct: 421 VAVGVIKAVEKKDPSGAKVTKSAAKKSGK 449

[Close]

BLAST of CsaV3_5G025920 vs. NCBI nr
Match: XP_022133908.1 (elongation factor 1-alpha-like [Momordica charantia])

HSP 1 Score: 803.9 bits (2075), Expect = 2.6e-229
Identity = 407/449 (90.65%), Postives = 417/449 (92.87%), Query Frame = 0


Query: 1   MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
           MGKEK HINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL
Sbjct: 1   MGKEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60

Query: 61  DKLKAERERGITIDIPLWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120
           DKLKAERERGITIDI LWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT
Sbjct: 61  DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120

Query: 121 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKSRYDEIVKEVSSYLKK 180
           GGFEAGISKDGQTREHALLAFTLGV+QMICCCNKMDATTPKYSK+RYDEIVKEVSSYLKK
Sbjct: 121 GGFEAGISKDGQTREHALLAFTLGVRQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKK 180

Query: 181 I-HQPRLV-----------------------QGPTLLEALDLIQEPKRPSDKPLRLPLQD 240
           + + P  +                       +GPTLLEALDLI EPKRPSDKPLRLPLQD
Sbjct: 181 VGYNPEKIPFVPISGFEGDNMIQRSTNLDWYKGPTLLEALDLIHEPKRPSDKPLRLPLQD 240

Query: 241 VYKIGGIGTVPVGRVETGIIKPGMVVTFAPSGLTTEVKSVEMHHEALQEALPGDNVGFNV 300
           VYKIGGIGTVPVGRVETGI+KPGMVVTFAPSGLTTEVKSVEMHHEALQEALPGDNVGFNV
Sbjct: 241 VYKIGGIGTVPVGRVETGILKPGMVVTFAPSGLTTEVKSVEMHHEALQEALPGDNVGFNV 300

Query: 301 KNVAVKDLKRGYVASNSKDDPAKEAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF 360
           KNVAVKDLKRGYVASNSKDDPAKEAANFT+QVIIMNHPGQIGNGYAPVLDCHTSHIAVKF
Sbjct: 301 KNVAVKDLKRGYVASNSKDDPAKEAANFTAQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF 360

Query: 361 AEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSAYPPLGRFAVRDMRQT 420
           +EILTKIDRRSGKELEKEPKFLKNGDAGFVKM+PTKPMVVETFS YPPLGRFAVRDMRQT
Sbjct: 361 SEILTKIDRRSGKELEKEPKFLKNGDAGFVKMVPTKPMVVETFSEYPPLGRFAVRDMRQT 420

Query: 421 VAVGVIKAVEKKDASGAKVTKSAAKKSGK 426
           VAVGVIKAVEKKD SGAKVTKSAAKKSGK
Sbjct: 421 VAVGVIKAVEKKDPSGAKVTKSAAKKSGK 449

[Close]

BLAST of CsaV3_5G025920 vs. NCBI nr
Match: XP_023551491.1 (elongation factor 1-alpha-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023551492.1 elongation factor 1-alpha-like isoform X2 [Cucurbita pepo subsp. pepo] >XP_023551493.1 elongation factor 1-alpha-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 803.9 bits (2075), Expect = 2.6e-229
Identity = 407/449 (90.65%), Postives = 417/449 (92.87%), Query Frame = 0


Query: 1   MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
           MGKEK HINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL
Sbjct: 1   MGKEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60

Query: 61  DKLKAERERGITIDIPLWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120
           DKLKAERERGITIDI LWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT
Sbjct: 61  DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120

Query: 121 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKSRYDEIVKEVSSYLKK 180
           GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMD+TTPKYSK+RYDEIVKEVSSYLKK
Sbjct: 121 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDSTTPKYSKARYDEIVKEVSSYLKK 180

Query: 181 I-HQPRLV-----------------------QGPTLLEALDLIQEPKRPSDKPLRLPLQD 240
           + + P  +                       +GPTLLEALDLIQEPKRPSDKPLRLPLQD
Sbjct: 181 VGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDLIQEPKRPSDKPLRLPLQD 240

Query: 241 VYKIGGIGTVPVGRVETGIIKPGMVVTFAPSGLTTEVKSVEMHHEALQEALPGDNVGFNV 300
           VYKIGGIGTVPVGRVETG++KPGMVVTFAPSGLTTEVKSVEMHHE LQEALPGDNVGFNV
Sbjct: 241 VYKIGGIGTVPVGRVETGVLKPGMVVTFAPSGLTTEVKSVEMHHEVLQEALPGDNVGFNV 300

Query: 301 KNVAVKDLKRGYVASNSKDDPAKEAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF 360
           KNVAVKDLKRGYVASNSKDDPAKEAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF
Sbjct: 301 KNVAVKDLKRGYVASNSKDDPAKEAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF 360

Query: 361 AEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSAYPPLGRFAVRDMRQT 420
           +EILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETF+ YPPLGRFAVRDMRQT
Sbjct: 361 SEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFATYPPLGRFAVRDMRQT 420

Query: 421 VAVGVIKAVEKKDASGAKVTKSAAKKSGK 426
           VAVGVIKAVEKKD SGAKVTKSAAKKSGK
Sbjct: 421 VAVGVIKAVEKKDPSGAKVTKSAAKKSGK 449

[Close]

BLAST of CsaV3_5G025920 vs. TAIR10
Match: AT1G07920.1 (GTP binding Elongation factor Tu family protein)

HSP 1 Score: 779.2 bits (2011), Expect = 1.3e-225
Identity = 394/449 (87.75%), Postives = 409/449 (91.09%), Query Frame = 0


Query: 1   MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
           MGKEK HINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL
Sbjct: 1   MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60

Query: 61  DKLKAERERGITIDIPLWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120
           DKLKAERERGITIDI LWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT
Sbjct: 61  DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120

Query: 121 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKSRYDEIVKEVSSYLKK 180
           GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSK+RYDEI+KEVSSYLKK
Sbjct: 121 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKK 180

Query: 181 I-HQPRLV-----------------------QGPTLLEALDLIQEPKRPSDKPLRLPLQD 240
           + + P  +                       +GPTLLEALD I EPKRPSDKPLRLPLQD
Sbjct: 181 VGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPSDKPLRLPLQD 240

Query: 241 VYKIGGIGTVPVGRVETGIIKPGMVVTFAPSGLTTEVKSVEMHHEALQEALPGDNVGFNV 300
           VYKIGGIGTVPVGRVETG+IKPGMVVTFAP+GLTTEVKSVEMHHE+L EALPGDNVGFNV
Sbjct: 241 VYKIGGIGTVPVGRVETGMIKPGMVVTFAPTGLTTEVKSVEMHHESLLEALPGDNVGFNV 300

Query: 301 KNVAVKDLKRGYVASNSKDDPAKEAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF 360
           KNVAVKDLKRGYVASNSKDDPAK AANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF
Sbjct: 301 KNVAVKDLKRGYVASNSKDDPAKGAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF 360

Query: 361 AEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSAYPPLGRFAVRDMRQT 420
           +EILTKIDRRSGKE+EKEPKFLKNGDAG VKM PTKPMVVETFS YPPLGRFAVRDMRQT
Sbjct: 361 SEILTKIDRRSGKEIEKEPKFLKNGDAGMVKMTPTKPMVVETFSEYPPLGRFAVRDMRQT 420

Query: 421 VAVGVIKAVEKKDASGAKVTKSAAKKSGK 426
           VAVGVIK+V+KKD +GAKVTK+A KK  K
Sbjct: 421 VAVGVIKSVDKKDPTGAKVTKAAVKKGAK 449

[Close]

BLAST of CsaV3_5G025920 vs. TAIR10
Match: AT1G07930.1 (GTP binding Elongation factor Tu family protein)

HSP 1 Score: 779.2 bits (2011), Expect = 1.3e-225
Identity = 394/449 (87.75%), Postives = 409/449 (91.09%), Query Frame = 0


Query: 1   MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
           MGKEK HINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL
Sbjct: 1   MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60

Query: 61  DKLKAERERGITIDIPLWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120
           DKLKAERERGITIDI LWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT
Sbjct: 61  DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120

Query: 121 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKSRYDEIVKEVSSYLKK 180
           GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSK+RYDEI+KEVSSYLKK
Sbjct: 121 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKK 180

Query: 181 I-HQPRLV-----------------------QGPTLLEALDLIQEPKRPSDKPLRLPLQD 240
           + + P  +                       +GPTLLEALD I EPKRPSDKPLRLPLQD
Sbjct: 181 VGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPSDKPLRLPLQD 240

Query: 241 VYKIGGIGTVPVGRVETGIIKPGMVVTFAPSGLTTEVKSVEMHHEALQEALPGDNVGFNV 300
           VYKIGGIGTVPVGRVETG+IKPGMVVTFAP+GLTTEVKSVEMHHE+L EALPGDNVGFNV
Sbjct: 241 VYKIGGIGTVPVGRVETGMIKPGMVVTFAPTGLTTEVKSVEMHHESLLEALPGDNVGFNV 300

Query: 301 KNVAVKDLKRGYVASNSKDDPAKEAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF 360
           KNVAVKDLKRGYVASNSKDDPAK AANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF
Sbjct: 301 KNVAVKDLKRGYVASNSKDDPAKGAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF 360

Query: 361 AEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSAYPPLGRFAVRDMRQT 420
           +EILTKIDRRSGKE+EKEPKFLKNGDAG VKM PTKPMVVETFS YPPLGRFAVRDMRQT
Sbjct: 361 SEILTKIDRRSGKEIEKEPKFLKNGDAGMVKMTPTKPMVVETFSEYPPLGRFAVRDMRQT 420

Query: 421 VAVGVIKAVEKKDASGAKVTKSAAKKSGK 426
           VAVGVIK+V+KKD +GAKVTK+A KK  K
Sbjct: 421 VAVGVIKSVDKKDPTGAKVTKAAVKKGAK 449

[Close]

BLAST of CsaV3_5G025920 vs. TAIR10
Match: AT1G07940.1 (GTP binding Elongation factor Tu family protein)

HSP 1 Score: 779.2 bits (2011), Expect = 1.3e-225
Identity = 394/449 (87.75%), Postives = 409/449 (91.09%), Query Frame = 0


Query: 1   MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
           MGKEK HINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL
Sbjct: 1   MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60

Query: 61  DKLKAERERGITIDIPLWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120
           DKLKAERERGITIDI LWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT
Sbjct: 61  DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120

Query: 121 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKSRYDEIVKEVSSYLKK 180
           GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSK+RYDEI+KEVSSYLKK
Sbjct: 121 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKK 180

Query: 181 I-HQPRLV-----------------------QGPTLLEALDLIQEPKRPSDKPLRLPLQD 240
           + + P  +                       +GPTLLEALD I EPKRPSDKPLRLPLQD
Sbjct: 181 VGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPSDKPLRLPLQD 240

Query: 241 VYKIGGIGTVPVGRVETGIIKPGMVVTFAPSGLTTEVKSVEMHHEALQEALPGDNVGFNV 300
           VYKIGGIGTVPVGRVETG+IKPGMVVTFAP+GLTTEVKSVEMHHE+L EALPGDNVGFNV
Sbjct: 241 VYKIGGIGTVPVGRVETGMIKPGMVVTFAPTGLTTEVKSVEMHHESLLEALPGDNVGFNV 300

Query: 301 KNVAVKDLKRGYVASNSKDDPAKEAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF 360
           KNVAVKDLKRGYVASNSKDDPAK AANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF
Sbjct: 301 KNVAVKDLKRGYVASNSKDDPAKGAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF 360

Query: 361 AEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSAYPPLGRFAVRDMRQT 420
           +EILTKIDRRSGKE+EKEPKFLKNGDAG VKM PTKPMVVETFS YPPLGRFAVRDMRQT
Sbjct: 361 SEILTKIDRRSGKEIEKEPKFLKNGDAGMVKMTPTKPMVVETFSEYPPLGRFAVRDMRQT 420

Query: 421 VAVGVIKAVEKKDASGAKVTKSAAKKSGK 426
           VAVGVIK+V+KKD +GAKVTK+A KK  K
Sbjct: 421 VAVGVIKSVDKKDPTGAKVTKAAVKKGAK 449

[Close]

BLAST of CsaV3_5G025920 vs. TAIR10
Match: AT5G60390.1 (GTP binding Elongation factor Tu family protein)

HSP 1 Score: 779.2 bits (2011), Expect = 1.3e-225
Identity = 394/449 (87.75%), Postives = 409/449 (91.09%), Query Frame = 0


Query: 1   MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
           MGKEK HINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL
Sbjct: 1   MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60

Query: 61  DKLKAERERGITIDIPLWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120
           DKLKAERERGITIDI LWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT
Sbjct: 61  DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120

Query: 121 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKSRYDEIVKEVSSYLKK 180
           GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSK+RYDEI+KEVSSYLKK
Sbjct: 121 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKK 180

Query: 181 I-HQPRLV-----------------------QGPTLLEALDLIQEPKRPSDKPLRLPLQD 240
           + + P  +                       +GPTLLEALD I EPKRPSDKPLRLPLQD
Sbjct: 181 VGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPSDKPLRLPLQD 240

Query: 241 VYKIGGIGTVPVGRVETGIIKPGMVVTFAPSGLTTEVKSVEMHHEALQEALPGDNVGFNV 300
           VYKIGGIGTVPVGRVETG+IKPGMVVTFAP+GLTTEVKSVEMHHE+L EALPGDNVGFNV
Sbjct: 241 VYKIGGIGTVPVGRVETGMIKPGMVVTFAPTGLTTEVKSVEMHHESLLEALPGDNVGFNV 300

Query: 301 KNVAVKDLKRGYVASNSKDDPAKEAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF 360
           KNVAVKDLKRGYVASNSKDDPAK AANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF
Sbjct: 301 KNVAVKDLKRGYVASNSKDDPAKGAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF 360

Query: 361 AEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSAYPPLGRFAVRDMRQT 420
           +EILTKIDRRSGKE+EKEPKFLKNGDAG VKM PTKPMVVETFS YPPLGRFAVRDMRQT
Sbjct: 361 SEILTKIDRRSGKEIEKEPKFLKNGDAGMVKMTPTKPMVVETFSEYPPLGRFAVRDMRQT 420

Query: 421 VAVGVIKAVEKKDASGAKVTKSAAKKSGK 426
           VAVGVIK+V+KKD +GAKVTK+A KK  K
Sbjct: 421 VAVGVIKSVDKKDPTGAKVTKAAVKKGAK 449

[Close]

BLAST of CsaV3_5G025920 vs. TAIR10
Match: AT1G18070.3 (Translation elongation factor EF1A/initiation factor IF2gamma family protein)

HSP 1 Score: 250.0 bits (637), Expect = 2.7e-66
Identity = 149/439 (33.94%), Postives = 238/439 (54.21%), Query Frame = 0


Query: 4   EKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKL 63
           +K H+N+V IGHVD+GKST  G +++  G +D R I+++EKEA + ++ S+  A+++D  
Sbjct: 98  KKRHLNVVFIGHVDAGKSTIGGQILFLSGQVDDRQIQKYEKEAKDKSRESWYMAYIMDTN 157

Query: 64  KAERERGITIDIPLWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGF 123
           + ER +G T+++    FET     T++DAPGH+ ++ NMI+G SQAD  VL+I +  G F
Sbjct: 158 EEERLKGKTVEVGRAHFETESTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEF 217

Query: 124 EAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKSRYDEIVKEVSSYLK---- 183
           E G  + GQTREH  LA TLGV ++I   NKMD  T  +SK RYDEI +++  +LK    
Sbjct: 218 ETGYERGGQTREHVQLAKTLGVSKLIVVVNKMDDPTVNWSKERYDEIEQKMVPFLKASGY 277

Query: 184 ----------------KIHQPRLVQ-------GPTLLEALDLIQEPKRPSDKPLRL---- 243
                           K    R+ Q       GP+  E LD I+ P R  + P RL    
Sbjct: 278 NTKKDVVFLPISGLMGKNMDQRMGQEICPWWSGPSFFEVLDSIEIPPRDPNGPFRLLTGI 337

Query: 244 -------PLQDVYKIGGIGTVPVGRVETGIIKPGMVVTFAPSGLTTEVKSVEMHHEALQE 303
                  P+ D +K   +GTV +G+VE+G I+ G  +   P+    +V ++    + ++ 
Sbjct: 338 DFMNCRMPIIDKFK--DMGTVVMGKVESGSIREGDSLVVMPNKEQVKVVAIYCDEDKVKR 397

Query: 304 ALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKEAANFTSQVIIMN--HPGQIGNGYAP 363
           A PG+N+   +  +  +D+  G+V S S  +P      F +Q+ I+          GY  
Sbjct: 398 AGPGENLRVRITGIEDEDILSGFVLS-SIVNPVPAVTEFVAQLQILELLDNAIFTAGYKA 457

Query: 364 VLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSAYP 403
           +L  H      +  E+ ++ID ++ K ++K+  F+KNG A   ++  T  + +E FS +P
Sbjct: 458 ILHIHAVVEECEIIELKSQIDLKTRKPMKKKVLFVKNGAAVVCRIQVTNSICIEKFSDFP 517

[Close]

BLAST of CsaV3_5G025920 vs. Swiss-Prot
Match: sp|O49169|EF1A_MANES (Elongation factor 1-alpha OS=Manihot esculenta OX=3983 GN=EF1 PE=3 SV=1)

HSP 1 Score: 800.0 bits (2065), Expect = 1.2e-230
Identity = 407/449 (90.65%), Postives = 415/449 (92.43%), Query Frame = 0


Query: 1   MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
           MGKEK HINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL
Sbjct: 1   MGKEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60

Query: 61  DKLKAERERGITIDIPLWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120
           DKLKAERERGITIDI LWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT
Sbjct: 61  DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120

Query: 121 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKSRYDEIVKEVSSYLKK 180
           GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSK+RYDEIVKEVSSYLKK
Sbjct: 121 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKK 180

Query: 181 I-HQPRLV-----------------------QGPTLLEALDLIQEPKRPSDKPLRLPLQD 240
           + + P  +                       +GPTLLEALD IQEPKRPSDKPLRLPLQD
Sbjct: 181 VGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQIQEPKRPSDKPLRLPLQD 240

Query: 241 VYKIGGIGTVPVGRVETGIIKPGMVVTFAPSGLTTEVKSVEMHHEALQEALPGDNVGFNV 300
           VYKIGGIGTVPVGRVETGI+KPGMVVTF P+GLTTEVKSVEMHHEALQEALPGDNVGFNV
Sbjct: 241 VYKIGGIGTVPVGRVETGILKPGMVVTFGPTGLTTEVKSVEMHHEALQEALPGDNVGFNV 300

Query: 301 KNVAVKDLKRGYVASNSKDDPAKEAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF 360
           KNVAVKDLKRG VASNSKDDPAKEAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF
Sbjct: 301 KNVAVKDLKRGIVASNSKDDPAKEAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF 360

Query: 361 AEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSAYPPLGRFAVRDMRQT 420
           AEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSAYPPLGRFAVRDMRQT
Sbjct: 361 AEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSAYPPLGRFAVRDMRQT 420

Query: 421 VAVGVIKAVEKKDASGAKVTKSAAKKSGK 426
           VAVGVIK+VEKKD SGAKVTKSAAKK GK
Sbjct: 421 VAVGVIKSVEKKDPSGAKVTKSAAKKGGK 449

[Close]

BLAST of CsaV3_5G025920 vs. Swiss-Prot
Match: sp|Q41803|EF1A_MAIZE (Elongation factor 1-alpha OS=Zea mays OX=4577 GN=EF1A PE=3 SV=1)

HSP 1 Score: 789.3 bits (2037), Expect = 2.2e-227
Identity = 398/446 (89.24%), Postives = 412/446 (92.38%), Query Frame = 0


Query: 1   MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
           MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL
Sbjct: 1   MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60

Query: 61  DKLKAERERGITIDIPLWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120
           DKLKAERERGITIDI LWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT
Sbjct: 61  DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120

Query: 121 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKSRYDEIVKEVSSYLKK 180
           GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSK+RYDEIVKEVSSYLKK
Sbjct: 121 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKK 180

Query: 181 I-HQPRLV-----------------------QGPTLLEALDLIQEPKRPSDKPLRLPLQD 240
           + + P  +                       +GPTLLEALDLI EPKRPSDKPLRLPLQD
Sbjct: 181 VGYNPDKIHFVPISGFEGDNMIERSTNLDWYKGPTLLEALDLINEPKRPSDKPLRLPLQD 240

Query: 241 VYKIGGIGTVPVGRVETGIIKPGMVVTFAPSGLTTEVKSVEMHHEALQEALPGDNVGFNV 300
           VYKIGGIGTVPVGRVETG+IKPGMVVTF P+GLTTEVKSVEMHHEALQEALPGDNVGFNV
Sbjct: 241 VYKIGGIGTVPVGRVETGVIKPGMVVTFGPTGLTTEVKSVEMHHEALQEALPGDNVGFNV 300

Query: 301 KNVAVKDLKRGYVASNSKDDPAKEAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF 360
           KNVAVKDLKRGYVAS SKDDPAKEAA+FTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF
Sbjct: 301 KNVAVKDLKRGYVASGSKDDPAKEAASFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF 360

Query: 361 AEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSAYPPLGRFAVRDMRQT 420
           AE++TKIDRRSGKELEKEPKFLKNGDAG VKM+PTKPMVVETFS YPPLGRFAVRDMRQT
Sbjct: 361 AELVTKIDRRSGKELEKEPKFLKNGDAGMVKMVPTKPMVVETFSQYPPLGRFAVRDMRQT 420

Query: 421 VAVGVIKAVEKKDASGAKVTKSAAKK 423
           VAVGVIK+VEKKD +GAKVTK+AAKK
Sbjct: 421 VAVGVIKSVEKKDPTGAKVTKAAAKK 446

[Close]

BLAST of CsaV3_5G025920 vs. Swiss-Prot
Match: sp|O64937|EF1A_ORYSJ (Elongation factor 1-alpha OS=Oryza sativa subsp. japonica OX=39947 GN=REFA1 PE=2 SV=2)

HSP 1 Score: 788.9 bits (2036), Expect = 2.9e-227
Identity = 399/446 (89.46%), Postives = 411/446 (92.15%), Query Frame = 0


Query: 1   MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
           MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL
Sbjct: 1   MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60

Query: 61  DKLKAERERGITIDIPLWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120
           DKLKAERERGITIDI LWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT
Sbjct: 61  DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120

Query: 121 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKSRYDEIVKEVSSYLKK 180
           GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSK+RYDEIVKEVSSYLKK
Sbjct: 121 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKK 180

Query: 181 I-HQPRLV-----------------------QGPTLLEALDLIQEPKRPSDKPLRLPLQD 240
           + + P  +                       +GPTLLEALD I EPKRPSDKPLRLPLQD
Sbjct: 181 VGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPSDKPLRLPLQD 240

Query: 241 VYKIGGIGTVPVGRVETGIIKPGMVVTFAPSGLTTEVKSVEMHHEALQEALPGDNVGFNV 300
           VYKIGGIGTVPVGRVETG++KPGMVVTF PSGLTTEVKSVEMHHEALQEALPGDNVGFNV
Sbjct: 241 VYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNV 300

Query: 301 KNVAVKDLKRGYVASNSKDDPAKEAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF 360
           KNVAVKDLKRGYVASNSKDDPAKEAA+FTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF
Sbjct: 301 KNVAVKDLKRGYVASNSKDDPAKEAASFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF 360

Query: 361 AEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSAYPPLGRFAVRDMRQT 420
           AE++TKIDRRSGKELEKEPKFLKNGDAG VKMIPTKPMVVETFS YPPLGRFAVRDMRQT
Sbjct: 361 AELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSEYPPLGRFAVRDMRQT 420

Query: 421 VAVGVIKAVEKKDASGAKVTKSAAKK 423
           VAVGVIK VEKKD +GAKVTK+AAKK
Sbjct: 421 VAVGVIKNVEKKDPTGAKVTKAAAKK 446

[Close]

BLAST of CsaV3_5G025920 vs. Swiss-Prot
Match: sp|P34823|EF1A2_DAUCA (Elongation factor 1-alpha OS=Daucus carota OX=4039 PE=2 SV=1)

HSP 1 Score: 784.3 bits (2024), Expect = 7.0e-226
Identity = 397/446 (89.01%), Postives = 410/446 (91.93%), Query Frame = 0


Query: 1   MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
           MGKEK HI+IVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL
Sbjct: 1   MGKEKIHISIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60

Query: 61  DKLKAERERGITIDIPLWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120
           DKLKAERERGITIDI LWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT
Sbjct: 61  DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120

Query: 121 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKSRYDEIVKEVSSYLKK 180
           GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKSR++EIVKEVSSYLKK
Sbjct: 121 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKSRFEEIVKEVSSYLKK 180

Query: 181 I-HQPRLV-----------------------QGPTLLEALDLIQEPKRPSDKPLRLPLQD 240
           + + P  +                       +GPTLLEALD I EPKRPSDKPLRLPLQD
Sbjct: 181 VGYNPDKIAFIPISGFEGDNMIDRSTNLDWYKGPTLLEALDQISEPKRPSDKPLRLPLQD 240

Query: 241 VYKIGGIGTVPVGRVETGIIKPGMVVTFAPSGLTTEVKSVEMHHEALQEALPGDNVGFNV 300
           VYKIGGIGTVPVGRVETG+IKPGMVVTF PSGLTTEVKSVEMHHEALQEALPGDNVGFNV
Sbjct: 241 VYKIGGIGTVPVGRVETGVIKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNV 300

Query: 301 KNVAVKDLKRGYVASNSKDDPAKEAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF 360
           KNVAVKDLKRGYVASNSKDDPAKEAANFT+QVIIMNHPGQIGNGYAPVLDCHTSHIAVKF
Sbjct: 301 KNVAVKDLKRGYVASNSKDDPAKEAANFTAQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF 360

Query: 361 AEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSAYPPLGRFAVRDMRQT 420
           AEI TKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETF +YPPLGRFAVRDMRQT
Sbjct: 361 AEIQTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFMSYPPLGRFAVRDMRQT 420

Query: 421 VAVGVIKAVEKKDASGAKVTKSAAKK 423
           VAVGVIK+VEKKD +GAKVTK+A KK
Sbjct: 421 VAVGVIKSVEKKDPTGAKVTKAAIKK 446

[Close]

BLAST of CsaV3_5G025920 vs. Swiss-Prot
Match: sp|P0DH99|EF1A1_ARATH (Elongation factor 1-alpha 1 OS=Arabidopsis thaliana OX=3702 GN=A1 PE=1 SV=1)

HSP 1 Score: 779.2 bits (2011), Expect = 2.3e-224
Identity = 394/449 (87.75%), Postives = 409/449 (91.09%), Query Frame = 0


Query: 1   MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
           MGKEK HINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL
Sbjct: 1   MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60

Query: 61  DKLKAERERGITIDIPLWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120
           DKLKAERERGITIDI LWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT
Sbjct: 61  DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120

Query: 121 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKSRYDEIVKEVSSYLKK 180
           GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSK+RYDEI+KEVSSYLKK
Sbjct: 121 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKK 180

Query: 181 I-HQPRLV-----------------------QGPTLLEALDLIQEPKRPSDKPLRLPLQD 240
           + + P  +                       +GPTLLEALD I EPKRPSDKPLRLPLQD
Sbjct: 181 VGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPSDKPLRLPLQD 240

Query: 241 VYKIGGIGTVPVGRVETGIIKPGMVVTFAPSGLTTEVKSVEMHHEALQEALPGDNVGFNV 300
           VYKIGGIGTVPVGRVETG+IKPGMVVTFAP+GLTTEVKSVEMHHE+L EALPGDNVGFNV
Sbjct: 241 VYKIGGIGTVPVGRVETGMIKPGMVVTFAPTGLTTEVKSVEMHHESLLEALPGDNVGFNV 300

Query: 301 KNVAVKDLKRGYVASNSKDDPAKEAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF 360
           KNVAVKDLKRGYVASNSKDDPAK AANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF
Sbjct: 301 KNVAVKDLKRGYVASNSKDDPAKGAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF 360

Query: 361 AEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSAYPPLGRFAVRDMRQT 420
           +EILTKIDRRSGKE+EKEPKFLKNGDAG VKM PTKPMVVETFS YPPLGRFAVRDMRQT
Sbjct: 361 SEILTKIDRRSGKEIEKEPKFLKNGDAGMVKMTPTKPMVVETFSEYPPLGRFAVRDMRQT 420

Query: 421 VAVGVIKAVEKKDASGAKVTKSAAKKSGK 426
           VAVGVIK+V+KKD +GAKVTK+A KK  K
Sbjct: 421 VAVGVIKSVDKKDPTGAKVTKAAVKKGAK 449

[Close]

BLAST of CsaV3_5G025920 vs. TrEMBL
Match: tr|A0A251J2Y7|A0A251J2Y7_MANES (Elongation factor 1-alpha OS=Manihot esculenta OX=3983 GN=MANES_15G054700 PE=3 SV=1)

HSP 1 Score: 799.7 bits (2064), Expect = 3.3e-228
Identity = 405/449 (90.20%), Postives = 415/449 (92.43%), Query Frame = 0


Query: 1   MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
           MGKEK HINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL
Sbjct: 1   MGKEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60

Query: 61  DKLKAERERGITIDIPLWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120
           DKLKAERERGITIDI LWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT
Sbjct: 61  DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120

Query: 121 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKSRYDEIVKEVSSYLKK 180
           GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSK+RYDEIVKEVSSYLKK
Sbjct: 121 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKK 180

Query: 181 I-HQPRLV-----------------------QGPTLLEALDLIQEPKRPSDKPLRLPLQD 240
           + + P  +                       +GPTLLEALD IQEPKRPSDKPLRLPLQD
Sbjct: 181 VGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQIQEPKRPSDKPLRLPLQD 240

Query: 241 VYKIGGIGTVPVGRVETGIIKPGMVVTFAPSGLTTEVKSVEMHHEALQEALPGDNVGFNV 300
           VYKIGGIGTVPVGRVETG++KPGMVVTF P+GLTTEVKSVEMHHEALQEALPGDNVGFNV
Sbjct: 241 VYKIGGIGTVPVGRVETGVLKPGMVVTFGPTGLTTEVKSVEMHHEALQEALPGDNVGFNV 300

Query: 301 KNVAVKDLKRGYVASNSKDDPAKEAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF 360
           KNVAVKDLKRG+VASNSKDDPAKEAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF
Sbjct: 301 KNVAVKDLKRGFVASNSKDDPAKEAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF 360

Query: 361 AEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSAYPPLGRFAVRDMRQT 420
           AEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFS YPPLGRFAVRDMRQT
Sbjct: 361 AEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSGYPPLGRFAVRDMRQT 420

Query: 421 VAVGVIKAVEKKDASGAKVTKSAAKKSGK 426
           VAVGVIK+VEKKD SGAKVTKSAAKK GK
Sbjct: 421 VAVGVIKSVEKKDPSGAKVTKSAAKKGGK 449

[Close]

BLAST of CsaV3_5G025920 vs. TrEMBL
Match: tr|A0A2C9W915|A0A2C9W915_MANES (Elongation factor 1-alpha OS=Manihot esculenta OX=3983 GN=MANES_03G146900 PE=3 SV=1)

HSP 1 Score: 799.7 bits (2064), Expect = 3.3e-228
Identity = 406/449 (90.42%), Postives = 416/449 (92.65%), Query Frame = 0


Query: 1   MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
           MGKEK HINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL
Sbjct: 1   MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60

Query: 61  DKLKAERERGITIDIPLWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120
           DKLKAERERGITIDI LWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT
Sbjct: 61  DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120

Query: 121 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKSRYDEIVKEVSSYLKK 180
           GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSK+RYDEIVKEVSSYLKK
Sbjct: 121 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKK 180

Query: 181 I-HQPRLV-----------------------QGPTLLEALDLIQEPKRPSDKPLRLPLQD 240
           + + P  +                       +GPTLLEALD IQEPKRPSDKPLRLPLQD
Sbjct: 181 VGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQIQEPKRPSDKPLRLPLQD 240

Query: 241 VYKIGGIGTVPVGRVETGIIKPGMVVTFAPSGLTTEVKSVEMHHEALQEALPGDNVGFNV 300
           VYKIGGIGTVPVGRVETGI+KPGMVVTF P+GLTTEVKSVEMHHEALQEALPGDNVGFNV
Sbjct: 241 VYKIGGIGTVPVGRVETGILKPGMVVTFGPTGLTTEVKSVEMHHEALQEALPGDNVGFNV 300

Query: 301 KNVAVKDLKRGYVASNSKDDPAKEAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF 360
           KNVAVKDLKRG+VASNSKDDPAKEAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF
Sbjct: 301 KNVAVKDLKRGFVASNSKDDPAKEAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF 360

Query: 361 AEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSAYPPLGRFAVRDMRQT 420
           AEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFS+YPPLGRFAVRDMRQT
Sbjct: 361 AEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSSYPPLGRFAVRDMRQT 420

Query: 421 VAVGVIKAVEKKDASGAKVTKSAAKKSGK 426
           VAVGVIK+VEKKD SGAKVTKSAAKK GK
Sbjct: 421 VAVGVIKSVEKKDPSGAKVTKSAAKKGGK 449

[Close]

BLAST of CsaV3_5G025920 vs. TrEMBL
Match: tr|A0A0H3YHL9|A0A0H3YHL9_9ROSI (Elongation factor 1-alpha OS=Plukenetia volubilis OX=316893 PE=2 SV=1)

HSP 1 Score: 799.3 bits (2063), Expect = 4.3e-228
Identity = 405/449 (90.20%), Postives = 413/449 (91.98%), Query Frame = 0


Query: 1   MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
           MGKEK HINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL
Sbjct: 1   MGKEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60

Query: 61  DKLKAERERGITIDIPLWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120
           DKLKAERERGITIDI LWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT
Sbjct: 61  DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120

Query: 121 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKSRYDEIVKEVSSYLKK 180
           GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSK+RYDEIVKEVSSYLKK
Sbjct: 121 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKK 180

Query: 181 I-HQPRLV-----------------------QGPTLLEALDLIQEPKRPSDKPLRLPLQD 240
           + + P  +                       +GPTLLEALDLI EPKRP+DKPLRLPLQD
Sbjct: 181 VGYNPEKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDLINEPKRPTDKPLRLPLQD 240

Query: 241 VYKIGGIGTVPVGRVETGIIKPGMVVTFAPSGLTTEVKSVEMHHEALQEALPGDNVGFNV 300
           VYKIGGIGTVPVGRVETGI+KPGMVVTF PSGLTTEVKSVEMHHEALQEALPGDNVGFNV
Sbjct: 241 VYKIGGIGTVPVGRVETGILKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNV 300

Query: 301 KNVAVKDLKRGYVASNSKDDPAKEAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF 360
           KNVAVKDLKRGYVASNSKDDP KEAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF
Sbjct: 301 KNVAVKDLKRGYVASNSKDDPTKEAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF 360

Query: 361 AEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSAYPPLGRFAVRDMRQT 420
           AEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFS YPPLGRFAVRDMRQT
Sbjct: 361 AEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQT 420

Query: 421 VAVGVIKAVEKKDASGAKVTKSAAKKSGK 426
           VAVGVIK+VEKKD SGAKVTKSA KK GK
Sbjct: 421 VAVGVIKSVEKKDPSGAKVTKSAVKKGGK 449

[Close]

BLAST of CsaV3_5G025920 vs. TrEMBL
Match: tr|V5IV14|V5IV14_HEVBR (Elongation factor 1-alpha OS=Hevea brasiliensis OX=3981 GN=EF1A1 PE=2 SV=1)

HSP 1 Score: 799.3 bits (2063), Expect = 4.3e-228
Identity = 405/449 (90.20%), Postives = 414/449 (92.20%), Query Frame = 0


Query: 1   MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
           MGKEK HINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL
Sbjct: 1   MGKEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60

Query: 61  DKLKAERERGITIDIPLWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120
           DKLKAERERGITIDI LWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT
Sbjct: 61  DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120

Query: 121 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKSRYDEIVKEVSSYLKK 180
           GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSK+RYDEIVKEVSSYLKK
Sbjct: 121 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKK 180

Query: 181 I-HQPRLV-----------------------QGPTLLEALDLIQEPKRPSDKPLRLPLQD 240
           + + P  +                       +GPTLLEALD IQEPKRPSDKPLRLPLQD
Sbjct: 181 VGYNPEKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQIQEPKRPSDKPLRLPLQD 240

Query: 241 VYKIGGIGTVPVGRVETGIIKPGMVVTFAPSGLTTEVKSVEMHHEALQEALPGDNVGFNV 300
           VYKIGGIGTVPVGRVETGI+KPGMVVTF PSGLTTEVKSVEMHHEALQEALPGDNVGFNV
Sbjct: 241 VYKIGGIGTVPVGRVETGILKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNV 300

Query: 301 KNVAVKDLKRGYVASNSKDDPAKEAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF 360
           KNVAVKDLKRG+VASNSKDDPAKEAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF
Sbjct: 301 KNVAVKDLKRGFVASNSKDDPAKEAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF 360

Query: 361 AEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSAYPPLGRFAVRDMRQT 420
           AEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFS YPPLGRFAVRDMRQT
Sbjct: 361 AEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSGYPPLGRFAVRDMRQT 420

Query: 421 VAVGVIKAVEKKDASGAKVTKSAAKKSGK 426
           VAVGVIK+VEKKD +GAKVTKSA KK GK
Sbjct: 421 VAVGVIKSVEKKDPTGAKVTKSAVKKGGK 449

[Close]

BLAST of CsaV3_5G025920 vs. TrEMBL
Match: tr|A0A2C9W7J6|A0A2C9W7J6_MANES (Elongation factor 1-alpha OS=Manihot esculenta OX=3983 GN=MANES_03G147000 PE=3 SV=1)

HSP 1 Score: 798.5 bits (2061), Expect = 7.3e-228
Identity = 405/449 (90.20%), Postives = 415/449 (92.43%), Query Frame = 0


Query: 1   MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
           MGKEK HINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL
Sbjct: 1   MGKEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60

Query: 61  DKLKAERERGITIDIPLWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120
           DKLKAERERGITIDI LWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT
Sbjct: 61  DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120

Query: 121 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKSRYDEIVKEVSSYLKK 180
           GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSK+RYDEIVKEVSSYLKK
Sbjct: 121 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKK 180

Query: 181 I-HQPRLV-----------------------QGPTLLEALDLIQEPKRPSDKPLRLPLQD 240
           + + P  +                       +GPTLLEALD IQEPKRPSDKPLRLPLQD
Sbjct: 181 VGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQIQEPKRPSDKPLRLPLQD 240

Query: 241 VYKIGGIGTVPVGRVETGIIKPGMVVTFAPSGLTTEVKSVEMHHEALQEALPGDNVGFNV 300
           VYKIGGIGTVPVGRVETGI+KPGMVVTF P+GLTTEVKSVEMHHEALQEALPGDNVGFNV
Sbjct: 241 VYKIGGIGTVPVGRVETGILKPGMVVTFGPTGLTTEVKSVEMHHEALQEALPGDNVGFNV 300

Query: 301 KNVAVKDLKRGYVASNSKDDPAKEAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF 360
           KNVAVKDLKRG+VASNSKDDPAKEAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF
Sbjct: 301 KNVAVKDLKRGFVASNSKDDPAKEAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF 360

Query: 361 AEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSAYPPLGRFAVRDMRQT 420
           AEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFS YPPLGRFAVRDMRQT
Sbjct: 361 AEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSQYPPLGRFAVRDMRQT 420

Query: 421 VAVGVIKAVEKKDASGAKVTKSAAKKSGK 426
           VAVGVIK+V+KKD SGAKVTKSAAKK GK
Sbjct: 421 VAVGVIKSVDKKDPSGAKVTKSAAKKGGK 449

The following BLAST results are available for this feature:

BLAST of CsaV3_5G025920 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011655319.1	2.7e-234	93.10	PREDICTED: elongation factor 1-alpha-like isoform X1 [Cucumis sativus] >XP_01165...	[more]
XP_022993452.1	9.0e-230	90.87	elongation factor 1-alpha [Cucurbita maxima] >XP_022993453.1 elongation factor 1...	[more]
XP_022938687.1	1.2e-229	90.65	elongation factor 1-alpha [Cucurbita moschata] >XP_022938688.1 elongation factor...	[more]
XP_022133908.1	2.6e-229	90.65	elongation factor 1-alpha-like [Momordica charantia]	[more]
XP_023551491.1	2.6e-229	90.65	elongation factor 1-alpha-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_02355...	[more]

BLAST of CsaV3_5G025920 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G07920.1	1.3e-225	87.75	GTP binding Elongation factor Tu family protein	[more]
AT1G07930.1	1.3e-225	87.75	GTP binding Elongation factor Tu family protein	[more]
AT1G07940.1	1.3e-225	87.75	GTP binding Elongation factor Tu family protein	[more]
AT5G60390.1	1.3e-225	87.75	GTP binding Elongation factor Tu family protein	[more]
AT1G18070.3	2.7e-66	33.94	Translation elongation factor EF1A/initiation factor IF2gamma family protein	[more]

BLAST of CsaV3_5G025920 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|O49169\|EF1A_MANES	1.2e-230	90.65	Elongation factor 1-alpha OS=Manihot esculenta OX=3983 GN=EF1 PE=3 SV=1	[more]
sp\|Q41803\|EF1A_MAIZE	2.2e-227	89.24	Elongation factor 1-alpha OS=Zea mays OX=4577 GN=EF1A PE=3 SV=1	[more]
sp\|O64937\|EF1A_ORYSJ	2.9e-227	89.46	Elongation factor 1-alpha OS=Oryza sativa subsp. japonica OX=39947 GN=REFA1 PE=2...	[more]
sp\|P34823\|EF1A2_DAUCA	7.0e-226	89.01	Elongation factor 1-alpha OS=Daucus carota OX=4039 PE=2 SV=1	[more]
sp\|P0DH99\|EF1A1_ARATH	2.3e-224	87.75	Elongation factor 1-alpha 1 OS=Arabidopsis thaliana OX=3702 GN=A1 PE=1 SV=1	[more]

BLAST of CsaV3_5G025920 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A251J2Y7\|A0A251J2Y7_MANES	3.3e-228	90.20	Elongation factor 1-alpha OS=Manihot esculenta OX=3983 GN=MANES_15G054700 PE=3 S...	[more]
tr\|A0A2C9W915\|A0A2C9W915_MANES	3.3e-228	90.42	Elongation factor 1-alpha OS=Manihot esculenta OX=3983 GN=MANES_03G146900 PE=3 S...	[more]
tr\|A0A0H3YHL9\|A0A0H3YHL9_9ROSI	4.3e-228	90.20	Elongation factor 1-alpha OS=Plukenetia volubilis OX=316893 PE=2 SV=1	[more]
tr\|V5IV14\|V5IV14_HEVBR	4.3e-228	90.20	Elongation factor 1-alpha OS=Hevea brasiliensis OX=3981 GN=EF1A1 PE=2 SV=1	[more]
tr\|A0A2C9W7J6\|A0A2C9W7J6_MANES	7.3e-228	90.20	Elongation factor 1-alpha OS=Manihot esculenta OX=3983 GN=MANES_03G147000 PE=3 S...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005525	GTP binding
GO:0003924	GTPase activity

Vocabulary: **INTERPRO**
Term	Definition
IPR009000	Transl_B-barrel_sf
IPR027417	P-loop_NTPase
IPR009001	Transl_elong_EF1A/Init_IF2_C
IPR004161	EFTu-like_2
IPR004160	Transl_elong_EFTu/EF1A_C
IPR000795	TF_GTP-bd_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_5G025920.1	CsaV3_5G025920.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000795	Transcription factor, GTP-binding domain	PRINTS	PR00315	ELONGATNFCT	coord: 9..22 score: 74.83 coord: 148..157 score: 47.47 coord: 104..115 score: 60.8 coord: 68..76 score: 70.24 coord: 88..98 score: 70.19
IPR000795	Transcription factor, GTP-binding domain	PFAM	PF00009	GTP_EFTU	coord: 5..206 e-value: 1.3E-48 score: 165.0
IPR000795	Transcription factor, GTP-binding domain	PROSITE	PS51722	G_TR_2	coord: 5..206 score: 50.69
None	No IPR available	GENE3D	G3DSA:2.40.30.10		coord: 205..296 e-value: 1.2E-42 score: 145.8
None	No IPR available	GENE3D	G3DSA:2.40.30.10		coord: 299..406 e-value: 1.3E-48 score: 165.7
None	No IPR available	GENE3D	G3DSA:3.40.50.300		coord: 1..204 e-value: 1.2E-74 score: 252.7
None	No IPR available	PANTHER	PTHR23115:SF230	SUBFAMILY NOT NAMED	coord: 1..181
None	No IPR available	PANTHER	PTHR23115:SF230	SUBFAMILY NOT NAMED	coord: 188..425
None	No IPR available	PANTHER	PTHR23115	TRANSLATION FACTOR	coord: 188..425 coord: 1..181
None	No IPR available	CDD	cd03693	EF1_alpha_II	coord: 206..296 e-value: 7.63726E-60 score: 190.862
None	No IPR available	CDD	cd03705	EF1_alpha_III	coord: 299..402 e-value: 2.43565E-65 score: 205.89
None	No IPR available	CDD	cd01883	EF1_alpha	coord: 9..203 e-value: 2.05054E-125 score: 364.12
IPR004160	Translation elongation factor EFTu/EF1A, C-terminal	PFAM	PF03143	GTP_EFTU_D3	coord: 298..405 e-value: 3.1E-37 score: 127.2
IPR004161	Translation elongation factor EFTu-like, domain 2	PFAM	PF03144	GTP_EFTU_D2	coord: 224..289 e-value: 4.7E-14 score: 52.5
IPR009001	Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal	SUPERFAMILY	SSF50465	EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain	coord: 302..405
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 3..225
IPR009000	Translation protein, beta-barrel domain superfamily	SUPERFAMILY	SSF50447	Translation proteins	coord: 207..297

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_5G025920	Silver-seed gourd	carcucB0297
CsaV3_5G025920	Silver-seed gourd	carcucB0724
CsaV3_5G025920	Cucumber (Gy14) v2	cgybcucB232
CsaV3_5G025920	Cucumber (Gy14) v1	cgycucB422
CsaV3_5G025920	Cucurbita maxima (Rimu)	cmacucB0354
CsaV3_5G025920	Cucurbita maxima (Rimu)	cmacucB0862
CsaV3_5G025920	Cucurbita maxima (Rimu)	cmacucB0892
CsaV3_5G025920	Cucurbita moschata (Rifu)	cmocucB0349
CsaV3_5G025920	Cucurbita moschata (Rifu)	cmocucB0848
CsaV3_5G025920	Cucurbita pepo (Zucchini)	cpecucB0211
CsaV3_5G025920	Cucurbita pepo (Zucchini)	cpecucB0519
CsaV3_5G025920	Cucurbita pepo (Zucchini)	cpecucB0550
CsaV3_5G025920	Wild cucumber (PI 183967)	cpicucB284
CsaV3_5G025920	Bottle gourd (USVL1VR-Ls)	cuclsiB370
CsaV3_5G025920	Melon (DHL92) v3.5.1	cucmeB359
CsaV3_5G025920	Melon (DHL92) v3.6.1	cucmedB351
CsaV3_5G025920	Watermelon (Charleston Gray)	cucwcgB362
CsaV3_5G025920	Watermelon (97103) v1	cucwmB387
CsaV3_5G025920	Watermelon (97103) v2	cucwmbB424
CsaV3_5G025920	Wax gourd	cucwgoB475