CsaV3_5G024560 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_5G024560
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	myosin heavy chain kinase B
Location	chr5 : 19461562 .. 19463558 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TAAAAAGGAAAAAGAAAAAAATTGCATTCCCCACACCCAAAGGTTGGGTGTCAAATAATTAAACATTTTTAATTACAATAAAGGCCATAGAAAATAAAAAGAAAAAAAGGTTAAAAAAGTCTCCCACTGATCCTTCTCTGTCTATGAACAACCAAAGTATCCGTTACACCCACCATTCAATTCCCTTTTTCCCCAACTTTAATTTAATAATCCTACAAATCAAACCTATCCCAATTCTTCAATTCCTCCCAACGGATTCAAAGATTCCCTTCTTTTTCTTCACTCCTCCGCTCCCCCCCTCCCTTCTCCCTCTCTCTCTCTCTCTCTCTTCCATGGATCCTCCTGTAACAGAAGCTGCCACGCCATTGTTGCACTCCACAAGCTCTGAAAGCAGCAGTGACGCTGACGACCACACTCCCCCGACTTCCTACCGATTCCACTTCAAAGGCATCAAATTCCCTTGTGATTTTCTCAACAAATCCCCATCTGGGTATTCTTCATATCGCCCACTGGCTGTTCTCCCCGGCCACATTGGCTCTGTTTCTTCTTTGGCTCTATGTGGTGAGTTCATTTTAAGCGCCTCGCAAGGGAAAGACATAATCGTATGGCAGCAGCCGGACTTAAGGGTTTTCACTAGATTCGGCCATGGTGAAGGATCGGTTAAGGCGGTGGTCGCCGTCGGGAACAGAGTCTTCACAGCTCATCAGGACGGGAAAATCAGAGTTTGGAAGGTTTCACGCAGGTCGGAGAACAATTTCCGTCTCGTGAATACTCTACCAACGGCGAAAGACTATTTGGGTAAGTTTATGAAACAAAGCAATTATGTTCAAACAAGAAGGCACCATAAAATCCTGTGGATTGAACATGCGGATACAATTTCTTGTTTAGCTGTTCATAATGGTCTGATTTACTCTGGCTCTTGGGACAAAACCCTAAAAGTTTGGAGGGTTTCTGATTTGAAATGTTTAGAATCCATTAAAGCTCACGATGATGCCATTAATGGGGTTGTAGCTTGTAATGGGATTGTATATTCAGCTTCTGCAGATGGGAAAATCAAAGCATGGGGAAGAAGAAAAAAAGAAGAAGAACAAGTAGAAGAAGAAATGCATAGTTTGTTAGGGATTTTAGAGGGTCATAAGGATGTATCAATAAATTCTGTGGTAGTTTCAAATGATGGGAAATGGGTATTTGGGGGAATTTCAGATGGGTTTTTAATGGGATGGGAAAAGATTGGAGAAACAATGAGTTGGAAAGTTGTTTGTGAGAAAAAAGCTCATAAAATGGCTGTCTTATGTGTATGTTTGACGGGGGAGTTTTTGTGCAGTGGATCAGCTGATAAGAGTATTGGGATTTGGAGAAGAGAAGCATTTGGGAGACTGTGTAAAATTGGGGTGATAAATGGACATGAAGGACCAATCAAATGCTTACAAGCAGCTCCAAATGGTGTGGGTGAGGGATTCTTGTTGTATAGTGGTAGCCTTGATAAAAGCTTGAGAGTTTGGTGGGTTTCTAAAGCTTCTGCTTCATCATCTTCATCATCTTCATCTTCTTCTTCTTCTTCAGCCATGGGAGTTGGTGCTTTCGTTGCAGAGGATTCGAAGAAGTCTATCATTTCCTTCTGAGTCAAGTTTTTGAAGTTGAAGCATTGGTTGGGTTCTTTTATTCAAGCCTTCATTGCTTCATATTCCTTTTTCATTTTTTTTCTCAGTAGATGTGAAGAAGAAATGGCAAGATTAGGGTAAAGCATAATTGGGTTTTTTTGGCTTTTCTTTTATTTAATTCATTTTTGGGTCAAAGCAACATAAATTTTTGAGTCATTTGTAACAAATTTTTTTGTGAAGATACAAGTGTGGGAAATCATGGAAATGTGTGAAGTCTTTGTAATGTATACCAATTTATTTGAATGTATATTCTCTTTTACACTATTTTGTTACAAGTTGTAATAGTTGAGAAAAGGGATTTCAATAAACGAAACAGTCTGTTGTTGGTGTTGTAAA

mRNA sequence

ATGAACAACCAAAGTATCCGTTACACCCACCATTCAATTCCCTTTTTCCCCAACTTTAATTTAATAATCCTACAAATCAAACCTATCCCAATTCTTCAATTCCTCCCAACGGATTCAAAGATTCCCTTCTTTTTCTTCACTCCTCCGCTCCCCCCCTCCCTTCTCCCTCTCTCTCTCTCTCTCTCTTCCATGGATCCTCCTGTAACAGAAGCTGCCACGCCATTGTTGCACTCCACAAGCTCTGAAAGCAGCAGTGACGCTGACGACCACACTCCCCCGACTTCCTACCGATTCCACTTCAAAGGCATCAAATTCCCTTGTGATTTTCTCAACAAATCCCCATCTGGGTATTCTTCATATCGCCCACTGGCTGTTCTCCCCGGCCACATTGGCTCTGTTTCTTCTTTGGCTCTATGTGGTGAGTTCATTTTAAGCGCCTCGCAAGGGAAAGACATAATCGTATGGCAGCAGCCGGACTTAAGGGTTTTCACTAGATTCGGCCATGGTGAAGGATCGGTTAAGGCGGTGGTCGCCGTCGGGAACAGAGTCTTCACAGCTCATCAGGACGGGAAAATCAGAGTTTGGAAGGTTTCACGCAGGTCGGAGAACAATTTCCGTCTCGTGAATACTCTACCAACGGCGAAAGACTATTTGGGTAAGTTTATGAAACAAAGCAATTATGTTCAAACAAGAAGGCACCATAAAATCCTGTGGATTGAACATGCGGATACAATTTCTTGTTTAGCTGTTCATAATGGTCTGATTTACTCTGGCTCTTGGGACAAAACCCTAAAAGTTTGGAGGGTTTCTGATTTGAAATGTTTAGAATCCATTAAAGCTCACGATGATGCCATTAATGGGGTTGTAGCTTGTAATGGGATTGTATATTCAGCTTCTGCAGATGGGAAAATCAAAGCATGGGGAAGAAGAAAAAAAGAAGAAGAACAAGTAGAAGAAGAAATGCATAGTTTGTTAGGGATTTTAGAGGGTCATAAGGATGTATCAATAAATTCTGTGGTAGTTTCAAATGATGGGAAATGGGTATTTGGGGGAATTTCAGATGGGTTTTTAATGGGATGGGAAAAGATTGGAGAAACAATGAGTTGGAAAGTTGTTTGTGAGAAAAAAGCTCATAAAATGGCTGTCTTATGTGTATGTTTGACGGGGGAGTTTTTGTGCAGTGGATCAGCTGATAAGAGTATTGGGATTTGGAGAAGAGAAGCATTTGGGAGACTGTGTAAAATTGGGGTGATAAATGGACATGAAGGACCAATCAAATGCTTACAAGCAGCTCCAAATGGTGTGGGTGAGGGATTCTTGTTGTATAGTGGTAGCCTTGATAAAAGCTTGAGAGTTTGGTGGGTTTCTAAAGCTTCTGCTTCATCATCTTCATCATCTTCATCTTCTTCTTCTTCTTCAGCCATGGGAGTTGGTGCTTTCGTTGCAGAGGATTCGAAGAAGTCTATCATTTCCTTCTGA

Coding sequence (CDS)

ATGAACAACCAAAGTATCCGTTACACCCACCATTCAATTCCCTTTTTCCCCAACTTTAATTTAATAATCCTACAAATCAAACCTATCCCAATTCTTCAATTCCTCCCAACGGATTCAAAGATTCCCTTCTTTTTCTTCACTCCTCCGCTCCCCCCCTCCCTTCTCCCTCTCTCTCTCTCTCTCTCTTCCATGGATCCTCCTGTAACAGAAGCTGCCACGCCATTGTTGCACTCCACAAGCTCTGAAAGCAGCAGTGACGCTGACGACCACACTCCCCCGACTTCCTACCGATTCCACTTCAAAGGCATCAAATTCCCTTGTGATTTTCTCAACAAATCCCCATCTGGGTATTCTTCATATCGCCCACTGGCTGTTCTCCCCGGCCACATTGGCTCTGTTTCTTCTTTGGCTCTATGTGGTGAGTTCATTTTAAGCGCCTCGCAAGGGAAAGACATAATCGTATGGCAGCAGCCGGACTTAAGGGTTTTCACTAGATTCGGCCATGGTGAAGGATCGGTTAAGGCGGTGGTCGCCGTCGGGAACAGAGTCTTCACAGCTCATCAGGACGGGAAAATCAGAGTTTGGAAGGTTTCACGCAGGTCGGAGAACAATTTCCGTCTCGTGAATACTCTACCAACGGCGAAAGACTATTTGGGTAAGTTTATGAAACAAAGCAATTATGTTCAAACAAGAAGGCACCATAAAATCCTGTGGATTGAACATGCGGATACAATTTCTTGTTTAGCTGTTCATAATGGTCTGATTTACTCTGGCTCTTGGGACAAAACCCTAAAAGTTTGGAGGGTTTCTGATTTGAAATGTTTAGAATCCATTAAAGCTCACGATGATGCCATTAATGGGGTTGTAGCTTGTAATGGGATTGTATATTCAGCTTCTGCAGATGGGAAAATCAAAGCATGGGGAAGAAGAAAAAAAGAAGAAGAACAAGTAGAAGAAGAAATGCATAGTTTGTTAGGGATTTTAGAGGGTCATAAGGATGTATCAATAAATTCTGTGGTAGTTTCAAATGATGGGAAATGGGTATTTGGGGGAATTTCAGATGGGTTTTTAATGGGATGGGAAAAGATTGGAGAAACAATGAGTTGGAAAGTTGTTTGTGAGAAAAAAGCTCATAAAATGGCTGTCTTATGTGTATGTTTGACGGGGGAGTTTTTGTGCAGTGGATCAGCTGATAAGAGTATTGGGATTTGGAGAAGAGAAGCATTTGGGAGACTGTGTAAAATTGGGGTGATAAATGGACATGAAGGACCAATCAAATGCTTACAAGCAGCTCCAAATGGTGTGGGTGAGGGATTCTTGTTGTATAGTGGTAGCCTTGATAAAAGCTTGAGAGTTTGGTGGGTTTCTAAAGCTTCTGCTTCATCATCTTCATCATCTTCATCTTCTTCTTCTTCTTCAGCCATGGGAGTTGGTGCTTTCGTTGCAGAGGATTCGAAGAAGTCTATCATTTCCTTCTGA

Protein sequence

MNNQSIRYTHHSIPFFPNFNLIILQIKPIPILQFLPTDSKIPFFFFTPPLPPSLLPLSLSLSSMDPPVTEAATPLLHSTSSESSSDADDHTPPTSYRFHFKGIKFPCDFLNKSPSGYSSYRPLAVLPGHIGSVSSLALCGEFILSASQGKDIIVWQQPDLRVFTRFGHGEGSVKAVVAVGNRVFTAHQDGKIRVWKVSRRSENNFRLVNTLPTAKDYLGKFMKQSNYVQTRRHHKILWIEHADTISCLAVHNGLIYSGSWDKTLKVWRVSDLKCLESIKAHDDAINGVVACNGIVYSASADGKIKAWGRRKKEEEQVEEEMHSLLGILEGHKDVSINSVVVSNDGKWVFGGISDGFLMGWEKIGETMSWKVVCEKKAHKMAVLCVCLTGEFLCSGSADKSIGIWRREAFGRLCKIGVINGHEGPIKCLQAAPNGVGEGFLLYSGSLDKSLRVWWVSKASASSSSSSSSSSSSSAMGVGAFVAEDSKKSIISF

Homology

[Close]

BLAST of CsaV3_5G024560 vs. NCBI nr
Match: XP_004140344.2 (PREDICTED: myosin heavy chain kinase B [Cucumis sativus] >KGN51095.1 hypothetical protein Csa_5G440090 [Cucumis sativus])

HSP 1 Score: 770.0 bits (1987), Expect = 4.9e-219
Identity = 429/429 (100.00%), Postives = 429/429 (100.00%), Query Frame = 0


Query: 64  MDPPVTEAATPLLHSTSSESSSDADDHTPPTSYRFHFKGIKFPCDFLNKSPSGYSSYRPL 123
           MDPPVTEAATPLLHSTSSESSSDADDHTPPTSYRFHFKGIKFPCDFLNKSPSGYSSYRPL
Sbjct: 1   MDPPVTEAATPLLHSTSSESSSDADDHTPPTSYRFHFKGIKFPCDFLNKSPSGYSSYRPL 60

Query: 124 AVLPGHIGSVSSLALCGEFILSASQGKDIIVWQQPDLRVFTRFGHGEGSVKAVVAVGNRV 183
           AVLPGHIGSVSSLALCGEFILSASQGKDIIVWQQPDLRVFTRFGHGEGSVKAVVAVGNRV
Sbjct: 61  AVLPGHIGSVSSLALCGEFILSASQGKDIIVWQQPDLRVFTRFGHGEGSVKAVVAVGNRV 120

Query: 184 FTAHQDGKIRVWKVSRRSENNFRLVNTLPTAKDYLGKFMKQSNYVQTRRHHKILWIEHAD 243
           FTAHQDGKIRVWKVSRRSENNFRLVNTLPTAKDYLGKFMKQSNYVQTRRHHKILWIEHAD
Sbjct: 121 FTAHQDGKIRVWKVSRRSENNFRLVNTLPTAKDYLGKFMKQSNYVQTRRHHKILWIEHAD 180

Query: 244 TISCLAVHNGLIYSGSWDKTLKVWRVSDLKCLESIKAXXXXXXXXXXXXXXXXXXXXXXX 303
           TISCLAVHNGLIYSGSWDKTLKVWRVSDLKCLESIKAXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 TISCLAVHNGLIYSGSWDKTLKVWRVSDLKCLESIKAXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 304 XXXXGRRKKEEEQVEEEMHSLLGILEGHKDVSINSVVVSNDGKWVFGGISDGFLMGWEKI 363
           XXXXGRRKKEEEQVEEEMHSLLGILEGHKDVSINSVVVSNDGKWVFGGISDGFLMGWEKI
Sbjct: 241 XXXXGRRKKEEEQVEEEMHSLLGILEGHKDVSINSVVVSNDGKWVFGGISDGFLMGWEKI 300

Query: 364 GETMSWKVVCEKKAHKMAVLCVCLTGEFLCSGSADKSIGIWRREAFGRLCKIGVINGHEG 423
           GETMSWKVVCEKKAHKMAVLCVCLTGEFLCSGSADKSIGIWRREAFGRLCKIGVINGHEG
Sbjct: 301 GETMSWKVVCEKKAHKMAVLCVCLTGEFLCSGSADKSIGIWRREAFGRLCKIGVINGHEG 360

Query: 424 PIKCLQAAPNGVGEGFLLYSGSLDKSLRVWWVSKXXXXXXXXXXXXXXXXXXXXXAFVAE 483
           PIKCLQAAPNGVGEGFLLYSGSLDKSLRVWWVSKXXXXXXXXXXXXXXXXXXXXXAFVAE
Sbjct: 361 PIKCLQAAPNGVGEGFLLYSGSLDKSLRVWWVSKXXXXXXXXXXXXXXXXXXXXXAFVAE 420

Query: 484 DSKKSIISF 493
           DSKKSIISF
Sbjct: 421 DSKKSIISF 429

[Close]

BLAST of CsaV3_5G024560 vs. NCBI nr
Match: XP_008465822.1 (PREDICTED: myosin heavy chain kinase B [Cucumis melo])

HSP 1 Score: 749.2 bits (1933), Expect = 8.9e-213
Identity = 400/429 (93.24%), Postives = 404/429 (94.17%), Query Frame = 0


Query: 64  MDPPVTEAATPLLHSTSSESSSDADDHTPPTSYRFHFKGIKFPCDFLNKSPSGYSSYRPL 123
           MDPPVTEAATPLLHSTSSESSSDADDHTPP+SYRF+FK +KFPCDFLNKS SGYSSYRPL
Sbjct: 1   MDPPVTEAATPLLHSTSSESSSDADDHTPPSSYRFNFKDVKFPCDFLNKSLSGYSSYRPL 60

Query: 124 AVLPGHIGSVSSLALCGEFILSASQGKDIIVWQQPDLRVFTRFGHGEGSVKAVVAVGNRV 183
           AVLPGHIGSVS LALCGEFILSASQGKDIIVWQQPDLRVFTRFGHGEGSVKAVVAVGNRV
Sbjct: 61  AVLPGHIGSVSCLALCGEFILSASQGKDIIVWQQPDLRVFTRFGHGEGSVKAVVAVGNRV 120

Query: 184 FTAHQDGKIRVWKVSRRSENNFRLVNTLPTAKDYLGKFMKQSNYVQTRRHHKILWIEHAD 243
           FTAHQDGKIRVWKVSRRSENNFRLVNTLPTAKDYLGKFMKQSNYVQTRRHHKILWIEHAD
Sbjct: 121 FTAHQDGKIRVWKVSRRSENNFRLVNTLPTAKDYLGKFMKQSNYVQTRRHHKILWIEHAD 180

Query: 244 TISCLAVHNGLIYSGSWDKTLKVWRVSDLKCLESIKAXXXXXXXXXXXXXXXXXXXXXXX 303
           TISCLAVHNGLIYSGSWDKTLKVWRVSDLKCLESIKAXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 TISCLAVHNGLIYSGSWDKTLKVWRVSDLKCLESIKAXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 304 XXXXGRRKKEEEQVEEEMHSLLGILEGHKDVSINSVVVSNDGKWVFGGISDGFLMGWEKI 363
           XXXXGRRKK+EEQVEEEMHSLLGILEGHKDVSINSVVVSNDGKWVFGGISDGFLMGWEKI
Sbjct: 241 XXXXGRRKKQEEQVEEEMHSLLGILEGHKDVSINSVVVSNDGKWVFGGISDGFLMGWEKI 300

Query: 364 GETMSWKVVCEKKAHKMAVLCVCLTGEFLCSGSADKSIGIWRREAFGRLCKIGVINGHEG 423
           GETMSWKVVCEKKAHKMAVLCVCL GEFLCSGSADKSIGIWRREAFGRLCKIGVINGHEG
Sbjct: 301 GETMSWKVVCEKKAHKMAVLCVCLMGEFLCSGSADKSIGIWRREAFGRLCKIGVINGHEG 360

Query: 424 PIKCLQAAPNGVGEGFLLYSGSLDKSLRVWWVSKXXXXXXXXXXXXXXXXXXXXXAFVAE 483
           PIKCLQAAPNGVGEGFLLYSGSLDKSLRVWWVSK                     AFVAE
Sbjct: 361 PIKCLQAAPNGVGEGFLLYSGSLDKSLRVWWVSK----ASPSSSSSSYSSAMGVGAFVAE 420

Query: 484 DSKKSIISF 493
           DSKKSIISF
Sbjct: 421 DSKKSIISF 425

[Close]

BLAST of CsaV3_5G024560 vs. NCBI nr
Match: XP_022993783.1 (protein JINGUBANG [Cucurbita maxima])

HSP 1 Score: 654.4 bits (1687), Expect = 3.0e-184
Identity = 356/430 (82.79%), Postives = 378/430 (87.91%), Query Frame = 0


Query: 64  MDPPVTEAATPLLHSTSSESSSDADDHTPPTSYRFHFKGIKFPCDFLNKSPSGYSSYRPL 123
           MDP V EAATPLLHSTSS++SSDAD++TP TSY F  K I F CDFL+KSPSGY  YR L
Sbjct: 1   MDPLVAEAATPLLHSTSSDTSSDADENTPVTSYSFDLKQIGFRCDFLSKSPSGYCPYRQL 60

Query: 124 AVLPGHIGSVSSLALCGEFILSASQGKDIIVWQQPDLRVFTRFGHGEGSVKAVVAVGNRV 183
           AVL GHIGSVS LALCGEFILSASQGKDIIVWQQPDLRVFTRFGHGEGSVKAVVAVG++V
Sbjct: 61  AVLSGHIGSVSCLALCGEFILSASQGKDIIVWQQPDLRVFTRFGHGEGSVKAVVAVGSKV 120

Query: 184 FTAHQDGKIRVWKVSRRSENNFRLVNTLPTAKDYLGKFMKQSNYVQTRRHHKILWIEHAD 243
           FTAHQDGKIRVWKVSRRSENNFRLVNTLPTAKDYLGKFMKQ NYVQTRRHHKILWIEHAD
Sbjct: 121 FTAHQDGKIRVWKVSRRSENNFRLVNTLPTAKDYLGKFMKQRNYVQTRRHHKILWIEHAD 180

Query: 244 TISCLAVHNGLIYSGSWDKTLKVWRVSDLKCLESIKAXXXXXXXXXXXXXXXXXXXXXXX 303
           TISCLAVHNGLIYSGSWDKTLK+WRVSDLKCLESIKAXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 TISCLAVHNGLIYSGSWDKTLKIWRVSDLKCLESIKAXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 304 XXXXGRRKKEEEQVEEEMHSLLGILEGHKDVSINSVVVSNDGKWVFGGISDGFLMGWEKI 363
           XXXX R+K+E    +EE H LLGILEGHKD S+N VVVS DGKWV+GGISDGFLMGWEK 
Sbjct: 241 XXXXXRKKQE----QEETHCLLGILEGHKDESMNCVVVSGDGKWVYGGISDGFLMGWEKT 300

Query: 364 GETMS-WKVVCEKKAHKMAVLCVCLTGEFLCSGSADKSIGIWRREAFGRLCKIGVINGHE 423
           GE++S WKVV E++AHKMAVLCVCL GEFLCSGSADKSIGIWRREAFGRLCK+GVINGH+
Sbjct: 301 GESVSCWKVVWERRAHKMAVLCVCLMGEFLCSGSADKSIGIWRREAFGRLCKVGVINGHD 360

Query: 424 GPIKCLQAAPNGVGEGFLLYSGSLDKSLRVWWVSKXXXXXXXXXXXXXXXXXXXXXAFVA 483
           GPIKCLQ APNGVGEGFLLYSGSLD+SLRVWWVSK                     A VA
Sbjct: 361 GPIKCLQVAPNGVGEGFLLYSGSLDRSLRVWWVSK--------------ASAMGVGALVA 412

Query: 484 EDSKKSIISF 493
           EDSKK+I+SF
Sbjct: 421 EDSKKAIVSF 412

[Close]

BLAST of CsaV3_5G024560 vs. NCBI nr
Match: XP_022939422.1 (protein JINGUBANG isoform X1 [Cucurbita moschata])

HSP 1 Score: 648.3 bits (1671), Expect = 2.1e-182
Identity = 352/430 (81.86%), Postives = 375/430 (87.21%), Query Frame = 0


Query: 64  MDPPVTEAATPLLHSTSSESSSDADDHTPPTSYRFHFKGIKFPCDFLNKSPSGYSSYRPL 123
           MDP V EAATPLLHSTSS++SSDAD++TP  SY F  K I F CDFL+KSPSGY  YR L
Sbjct: 1   MDPLVAEAATPLLHSTSSDTSSDADENTPAPSYTFDLKQIGFRCDFLSKSPSGYCPYRQL 60

Query: 124 AVLPGHIGSVSSLALCGEFILSASQGKDIIVWQQPDLRVFTRFGHGEGSVKAVVAVGNRV 183
           AVL GHIGSVS LALCGEFILSASQGKDIIVWQQPDLRVFTRFGHGEGSVKAVV VG++V
Sbjct: 61  AVLSGHIGSVSCLALCGEFILSASQGKDIIVWQQPDLRVFTRFGHGEGSVKAVVTVGSKV 120

Query: 184 FTAHQDGKIRVWKVSRRSENNFRLVNTLPTAKDYLGKFMKQSNYVQTRRHHKILWIEHAD 243
           FTAHQDGKIRVWKVSRRSENNFRLVNTLPTAKDYLGKFMKQ NYVQTRRHHKILWIEHAD
Sbjct: 121 FTAHQDGKIRVWKVSRRSENNFRLVNTLPTAKDYLGKFMKQRNYVQTRRHHKILWIEHAD 180

Query: 244 TISCLAVHNGLIYSGSWDKTLKVWRVSDLKCLESIKAXXXXXXXXXXXXXXXXXXXXXXX 303
           TISCLAVHNGLIYSGSWDKTLK+WRVSDLKCLESIKAXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 TISCLAVHNGLIYSGSWDKTLKIWRVSDLKCLESIKAXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 304 XXXXGRRKKEEEQVEEEMHSLLGILEGHKDVSINSVVVSNDGKWVFGGISDGFLMGWEKI 363
           XXXX R+K+E    +EE H LLGILEGHKD S+N VVVS DGKWV+GGISDGFLMGWEK 
Sbjct: 241 XXXXXRKKQE----QEETHCLLGILEGHKDESMNCVVVSGDGKWVYGGISDGFLMGWEKT 300

Query: 364 GETMS-WKVVCEKKAHKMAVLCVCLTGEFLCSGSADKSIGIWRREAFGRLCKIGVINGHE 423
           GE++S WKV  E++AHKMAVLCVCL GEFLCSGSADKSIGIWRREAFGRLCK+GVINGH+
Sbjct: 301 GESVSCWKVTWERRAHKMAVLCVCLMGEFLCSGSADKSIGIWRREAFGRLCKVGVINGHD 360

Query: 424 GPIKCLQAAPNGVGEGFLLYSGSLDKSLRVWWVSKXXXXXXXXXXXXXXXXXXXXXAFVA 483
           GPIKCLQ APNGVGEGFLLYSGSLD+SLRVWWVSK                     A VA
Sbjct: 361 GPIKCLQVAPNGVGEGFLLYSGSLDRSLRVWWVSK--------------ASAMGVGALVA 412

Query: 484 EDSKKSIISF 493
           EDSKK+I+S+
Sbjct: 421 EDSKKAIVSY 412

[Close]

BLAST of CsaV3_5G024560 vs. NCBI nr
Match: XP_023551252.1 (protein JINGUBANG isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 644.0 bits (1660), Expect = 4.0e-181
Identity = 351/432 (81.25%), Postives = 372/432 (86.11%), Query Frame = 0


Query: 64  MDPPVTEAATPLLHSTSSESSSDADDHTPPTSYRFHFKGIKFPCDFLNKSPSGYSSYRPL 123
           MDP V EAATPLLHSTSS++SSDADD+TP  SY F  K I F CDFL+KSPSGY  YR L
Sbjct: 1   MDPFVAEAATPLLHSTSSDTSSDADDNTPAPSYTFDLKQIGFRCDFLSKSPSGYCPYRQL 60

Query: 124 AVLPGHIGSVSSLALCGEFILSASQGKDIIVWQQPDLRVFTRFGHGEGSVKAVVAVGNRV 183
           AVL GHIGSVS LA+CGEFILSASQGKDIIVWQQPDLRVFTRFGHGEGSVKAVV VG++V
Sbjct: 61  AVLSGHIGSVSCLAMCGEFILSASQGKDIIVWQQPDLRVFTRFGHGEGSVKAVVTVGSKV 120

Query: 184 FTAHQDGKIRVWKVSRRSENNFRLVNTLPTAKDYLGKFMKQSNYVQTRRHHKILWIEHAD 243
           FTAHQDGKIRVWKVSRRSENNFRLVNTLPTAKDYLGKFMKQ NYVQTRRHHKILWIEHAD
Sbjct: 121 FTAHQDGKIRVWKVSRRSENNFRLVNTLPTAKDYLGKFMKQKNYVQTRRHHKILWIEHAD 180

Query: 244 TISCLAVHNGLIYSGSWDKTLKVWRVSDLKCLESIKAXXXXXXXXXXXXXXXXXXXXXXX 303
           TISCLAVHNGLIYSGSWDKTLK+WRVSDLKCLESIKAXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 TISCLAVHNGLIYSGSWDKTLKIWRVSDLKCLESIKAXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 304 XXXXGRRK--KEEEQVEEEMHSLLGILEGHKDVSINSVVVSNDGKWVFGGISDGFLMGWE 363
           XXXXGR+K            H LLGILEGHKD S+N VVVS DGKWV+GGISDGFLMGWE
Sbjct: 241 XXXXGRKKXXXXXXXXXXXXHCLLGILEGHKDESMNCVVVSGDGKWVYGGISDGFLMGWE 300

Query: 364 KIGETMS-WKVVCEKKAHKMAVLCVCLTGEFLCSGSADKSIGIWRREAFGRLCKIGVING 423
           K GE++S WKVV E++AHKMAVLCVCL GEFLCSGSADKSIGIWRREAFGRLCK+GVING
Sbjct: 301 KTGESVSCWKVVWERRAHKMAVLCVCLMGEFLCSGSADKSIGIWRREAFGRLCKVGVING 360

Query: 424 HEGPIKCLQAAPNGVGEGFLLYSGSLDKSLRVWWVSKXXXXXXXXXXXXXXXXXXXXXAF 483
           H+GPIKCLQ APNGVGEGFLLYSGSLD+SLRVWWVSK                     A 
Sbjct: 361 HDGPIKCLQVAPNGVGEGFLLYSGSLDRSLRVWWVSK--------------ASAMGVGAL 418

Query: 484 VAEDSKKSIISF 493
           VAEDSKK+++SF
Sbjct: 421 VAEDSKKAVVSF 418

[Close]

BLAST of CsaV3_5G024560 vs. TAIR10
Match: AT3G51930.1 (Transducin/WD40 repeat-like superfamily protein)

HSP 1 Score: 460.3 bits (1183), Expect = 1.5e-129
Identity = 252/347 (72.62%), Postives = 287/347 (82.71%), Query Frame = 0


Query: 119 SYRPLAVLPGHIGSVSSLALCGEFILSASQGKDIIVWQQPDLRVFTRFGHGEGSVKAVVA 178
           +Y+PLAVL  H+GSVSSLALCGEF+LSASQGKDIIVWQQPDL++F +FG G+GSVKA+V+
Sbjct: 50  AYKPLAVLSAHVGSVSSLALCGEFLLSASQGKDIIVWQQPDLKIFAKFGQGDGSVKALVS 109

Query: 179 VGNRVFTAHQDGKIRVWKVSRR-SENNFRLVNTLPTAKDYLGKFMKQSNYVQTRRHHKIL 238
           VG++VFTAHQD +IRVWKVSRR SEN FRLV+TLPT KDYLGKFMKQSNYVQTRR+HK L
Sbjct: 110 VGSKVFTAHQDSRIRVWKVSRRNSENAFRLVDTLPTTKDYLGKFMKQSNYVQTRRNHKRL 169

Query: 239 WIEHADTISCLAVHNGLIYSGSWDKTLKVWRVSDLKCLESIKAXXXXXXXXXXXXXXXXX 298
           WIEHAD+ISCLAVH G+IYSGSWDKTLKVWR+SDLKCLESIKAXXXXXXXXXXXXXXXXX
Sbjct: 170 WIEHADSISCLAVHAGIIYSGSWDKTLKVWRLSDLKCLESIKAXXXXXXXXXXXXXXXXX 229

Query: 299 XXXXXXXXXXGRRKKEEEQVEEEMHS----LLGILEGHKDVSINSVVVSNDGKWVFGGIS 358
           XXXXXXXXXX                    L   LEG  +VS+NSVVVS DG WV+GG S
Sbjct: 230 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLKATLEGRAEVSVNSVVVSGDGNWVYGGGS 289

Query: 359 DGFLMGW---EKIGETMSWKVVCEKKAHKMAVLCVCLTGEFLCSGSADKSIGIWRREAFG 418
           DGF++GW   EK G+   W++  E + H MAVLC+C+ GE +CSGSADKSIG+WRRE  G
Sbjct: 290 DGFVIGWEKKEKEGDFEEWRLGFETRGHNMAVLCMCVVGEMVCSGSADKSIGLWRREVTG 349

Query: 419 RLCKIGVINGHEGPIKCLQAAPNGVGEGFLLYSGSLDKSLRVWWVSK 458
            LCK GVI+GHEGP+KCLQA+PN VG GF+LYSG LDKSLRVWWV K
Sbjct: 350 MLCKFGVIHGHEGPVKCLQASPNNVGAGFMLYSGGLDKSLRVWWVPK 396

[Close]

BLAST of CsaV3_5G024560 vs. TAIR10
Match: AT1G49450.1 (Transducin/WD40 repeat-like superfamily protein)

HSP 1 Score: 200.3 bits (508), Expect = 2.8e-51
Identity = 136/345 (39.42%), Postives = 187/345 (54.20%), Query Frame = 0


Query: 131 GSVSSLALCGEFILSASQGKDIIVWQQPDLRVFTRFGHGEGSVKAVVAV-GNRVFTAHQD 190
           G V SLA  G+ + + S  K+I VW+  DL+ F+ F    G VKA+V    NRVFT HQD
Sbjct: 135 GHVYSLAASGDLLFTGSDSKNIRVWK--DLKDFSGFKSTSGFVKAIVVTRDNRVFTGHQD 194

Query: 191 GKIRVWKVSRRSENNFRLVNTLPTAKDYLGKFMKQSNYVQTRRHHKILWIEHADTISCLA 250
           GKIRVW+ S+++   +  V +LPT K++L K +   NYV+ RR   +L I H D +SCL+
Sbjct: 195 GKIRVWRGSKKNPEKYSRVGSLPTLKEFLTKSVNPRNYVEVRRRKNVLKIRHFDAVSCLS 254

Query: 251 VHN--GLIYSGSWDKTLKVWRVSDLKCLESIKAXXXXXXXXXXXXXXXXXXXXXXXXXXX 310
           ++   GL+YSGSWDKTLKVWR+SD KCLESI+A               XXXXXXXXXXXX
Sbjct: 255 LNEDLGLLYSGSWDKTLKVWRLSDSKCLESIEAHDDAVNTVVSGFDDLXXXXXXXXXXXX 314

Query: 311 GRRKKEEEQVEEEMHSLLGILEGHKDVSINSVVVSNDGKWVFGGISDGFLMGWEKIGETM 370
             R   E Q +E  H L+ +L   ++ ++ ++ V                          
Sbjct: 315 XXR---EVQGKEMKHVLVQVLMKQEN-AVTALAV------XXXXXXXXXXXXXXXXXXXX 374

Query: 371 SWKVVCEK---KAHKMAVLCVCLTGEFLCSGSADKSIGIWRREAFGRLCKIGVINGHEGP 430
             K +  K     H+MAVLC+   G  L SG ADK+I +W+R   G    + V+  HEGP
Sbjct: 375 XXKYLTHKGTIHGHRMAVLCLATAGSLLLSGGADKNICVWKRNGDGSHTCLSVLMDHEGP 434

Query: 431 IKCLQAAPNG-------------VGEGFLLYSGSLDKSLRVWWVS 457
           +KCL A                   + +++YSGSLD S++VW V+
Sbjct: 435 VKCLAAVEEAXXXXXXXXXXXXXXDQRWIVYSGSLDNSVKVWRVT 467

[Close]

BLAST of CsaV3_5G024560 vs. TAIR10
Match: AT1G47610.1 (Transducin/WD40 repeat-like superfamily protein)

HSP 1 Score: 189.9 bits (481), Expect = 3.8e-48
Identity = 132/340 (38.82%), Postives = 173/340 (50.88%), Query Frame = 0


Query: 131 GSVSSLALCGEFILSASQGKDIIVWQQPDLRVFTRFGHGEGSVKAVVAVGN-RVFTAHQD 190
           G + SLA   + + + S    I VW+  +L  F+ F    G VKA+V     +VFT HQD
Sbjct: 25  GHIYSLAATNDLLYTGSDNNYIRVWK--NLNEFSGFKSNSGLVKAIVISREAKVFTGHQD 84

Query: 191 GKIRVWKVSRRSENNFRLVNTLPTAKDYLGKFMKQSNYVQTRRHHKILWIEHADTISC-- 250
           GKIRVWK S ++   +    +LP  KD L   +K SNYV+ RR    LWI+H+D +SC  
Sbjct: 85  GKIRVWKTSSKNPRVYTRAGSLPALKDVLKSSVKPSNYVEVRRCRTALWIKHSDAVSCLS 144

Query: 251 LAVHNGLIYSGSWDKTLKVWRVSDLKCLESIKAXXXXXXXXXXXXXXXXXXXXXXXXXXX 310
           LA   GL+YS SWD+T+KVWR+ DLKC+ESIKA                 XXXXXXXXXX
Sbjct: 145 LAEDQGLLYSASWDRTVKVWRIHDLKCIESIKA----HDDAVNSVTTAESXXXXXXXXXX 204

Query: 311 GRRKKEEEQVEEEMHSLLGILEGHKDVSINSVVVSNDGKWVFGGISDGFLMGWEKIGETM 370
               K E + +   HSL                                    +K     
Sbjct: 205 XXXXKREIRGKRTAHSLFQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDK----- 264

Query: 371 SWKVV--CEK-KAHKMAVLCVCLTGEFLCSGSADKSIGIWRREAFGRLCKIGVINGHEGP 430
             K++  CE  K H++AVLC+   G+ L SG+ADK I +WRRE     C + V+ GH GP
Sbjct: 265 --KLLKHCEVFKKHRLAVLCIAAAGKLLFSGAADKKICVWRREGKVHTC-VSVLTGHTGP 324

Query: 431 IKCLQAAPNGVGE-------GFLLYSGSLDKSLRVWWVSK 458
           +KCL       GE         +LYSGSLDKS++VW V +
Sbjct: 325 VKCLAVVEPSGGEEEDGGDGRLVLYSGSLDKSVKVWRVPR 350

[Close]

BLAST of CsaV3_5G024560 vs. TAIR10
Match: AT5G50120.1 (Transducin/WD40 repeat-like superfamily protein)

HSP 1 Score: 186.0 bits (471), Expect = 5.4e-47
Identity = 124/367 (33.79%), Postives = 184/367 (50.14%), Query Frame = 0


Query: 118 SSYRPL----AVLPGHIGS-VSSLALCGEFILSASQGKDIIVWQQPDLR----------V 177
           SS +PL    A L  H  S +SSL L G+ + + S    + +W    L           V
Sbjct: 21  SSSQPLHQCIATLVCHTASYISSLTLAGKRLYTGSNDGVVRLWNANTLETLAEASSNGDV 80

Query: 178 FTRFGHGEGSVKAVVAVGNRVFTAHQDGKIRVWKVSRRSENN-----FRLVNTLPTAKDY 237
            T    G G+VK++V + +++FTAHQD KIRVWK++   E +     +  + T+PT  D 
Sbjct: 81  ITGERGGGGAVKSLVILADKLFTAHQDHKIRVWKINDVVEEDVGGKKYMHLATMPTISDR 140

Query: 238 LGKFMKQSNYVQTRRHHKILWIEHADTISCLAVHNG--LIYSGSWDKTLKVWRVSDLKCL 297
             K +   N V+ RRH K  W+ H D +S LA+     L+YS SWD+TLK+WR +D KCL
Sbjct: 141 FAKCLMPKNQVEIRRHKKASWVHHVDAVSGLALSRDGTLLYSVSWDRTLKIWRTTDFKCL 200

Query: 298 ESI-KAXXXXXXXXXXXXXXXXXXXXXXXXXXXGRRKKEEEQVEEE-MHSLLGILEGHKD 357
           ES   A                            R+   EE V+++  HSL+ IL  H  
Sbjct: 201 ESFTNAHDDAINAVALSENGDIYTGSSDQRIKVWRKNINEENVKKKRKHSLVAILSEHNS 260

Query: 358 VSINSVVVS-NDGKWVFGGISDGFLMGWEKIGETMSWKVVCEKKAHKMAVLCVCLTGEFL 417
             IN++ +S  +G  +  G SDG ++ WE+  +     VV   + H  +VLC+ +  + L
Sbjct: 261 -GINALALSGTNGSLLHSGGSDGSILVWER-DDGGDIVVVGMLRGHTESVLCLAVVSDIL 320

Query: 418 CSGSADKSIGIWRREAFGRLCKIGVINGHEGPIKCLQAA----PNGVGEGFLLYSGSLDK 456
           CSGSADK++ +W+  A    C + ++ GH GP+KCL  A           + +YSG LD 
Sbjct: 321 CSGSADKTVRLWKCSAKDYSC-LAMLEGHLGPVKCLTGAFRDSRKADEASYHIYSGGLDS 380

[Close]

BLAST of CsaV3_5G024560 vs. TAIR10
Match: AT1G24130.1 (Transducin/WD40 repeat-like superfamily protein)

HSP 1 Score: 181.8 bits (460), Expect = 1.0e-45
Identity = 123/355 (34.65%), Postives = 181/355 (50.99%), Query Frame = 0


Query: 123 LAVLPGHIGSVSSLALCGEFILSASQGKDIIVW-QQPDLRVFTRFG-------HGEGSVK 182
           LA L      VSSLA+  + + + S   +I VW ++P        G       +G G VK
Sbjct: 62  LATLKDKSSYVSSLAVSDKLLYTGSSNSEIRVWPREPPFSPEYSTGDDRNVVANGNGGVK 121

Query: 183 AVVAVGNRVFTAHQDGKIRVWKV---SRRSENNFRLVNTLPTAKDYLGKFMKQSNYVQTR 242
           ++V +G+++ +AHQD KIRVWK+   S R    ++ V TLPT  D         +YV+ R
Sbjct: 122 SLVILGDKLISAHQDHKIRVWKIIDESNRRGQKYKCVATLPTMNDRFKTLFSSKSYVEVR 181

Query: 243 RHHKILWIEHADTISCLAV--HNGLIYSGSWDKTLKVWRVSDLKCLESIKAXXXXXXXXX 302
           RH K  W+ H D +S LA+     L+YS SWD++ K+WR SD KCL+SI+          
Sbjct: 182 RHKKCTWVHHVDAVSSLALSQDGSLLYSASWDRSFKIWRTSDFKCLDSIEKAHDDAINAI 241

Query: 303 XXXXXXXXXXXXXXXXXXGRRKKEEEQVEEEMHSLLGILEGHKDVSINSVVVSNDGKWVF 362
                   XXXXXXXXXX   KK+++      HSL+  L  H              K ++
Sbjct: 242 VVSKDGFVXXXXXXXXXXXXNKKDKK------HSLVATLTKHL-XXXXXXXXXXXXKVLY 301

Query: 363 GGISDGFLMGWEKI----GETMSWKVVCEKKAHKMAVLCVCLTGEFLCSGSADKSIGIWR 422
            G  D  ++ WE++     E +   VV   + H+ A++C+ +  + + SGSADKS+ +WR
Sbjct: 302 SGACDRSILVWERLINGDDEELHMSVVGALRGHRKAIMCLAVASDLVLSGSADKSLRVWR 361

Query: 423 R---EAFGRLCKIGVINGHEGPIKCLQA----APNGVGEGFLLYSGSLDKSLRVW 454
           R   E  G  C + V+ GH  P+K L      + +      ++YSGSLD SL+VW
Sbjct: 362 RGLMEKEGYSC-LAVLEGHTKPVKSLAVSVSDSDSNSDYSCMVYSGSLDLSLKVW 408

[Close]

BLAST of CsaV3_5G024560 vs. Swiss-Prot
Match: sp|O48716|JGB_ARATH (Protein JINGUBANG OS=Arabidopsis thaliana OX=3702 GN=JGB PE=1 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 8.9e-39
Identity = 101/334 (30.24%), Postives = 164/334 (49.10%), Query Frame = 0


Query: 131 GSVSSLALCGEFILSASQGKDIIVWQQPDLRVFTRFGHGEGSVKAVVAVGNRVFTAHQDG 190
           G + SLA   + + + S  K+I VW+  +L+ F+ F    G VKA+              
Sbjct: 97  GHIYSLAATKDLLYTGSDSKNIRVWK--NLKEFSAFKCNSGLVKAIXXXXXXXXXXXXXX 156

Query: 191 KIRVWKVSRRSENNFRLVNTLPTAKDYLGKFMKQSNYVQTRRHHKILWIEHADTISCLAV 250
                  S ++++  +   TLPT KD     +K  NYV+ ++H   LWI+HAD +SCL++
Sbjct: 157 XXXXXXXSPKNQSLHKRSGTLPTLKDIFKASLKPRNYVEVKKHRTALWIKHADAVSCLSL 216

Query: 251 HN--GLIYSGSWDKTLKVWRVSDLKCLESIKAXXXXXXXXXXXXXXXXXXXXXXXXXXXG 310
           ++  GL+YS SWD+T+KVWR++D KCLESI A                            
Sbjct: 217 NDEQGLLYSASWDRTIKVWRIADSKCLESIPAHDDAVNSVVSTTEAIVFSGSADGTV--- 276

Query: 311 RRKKEEEQVEEEMHSLLGILEGHKDVSINSVVVSNDGKWVFGGISDGFLMGWEKIGETMS 370
           +  K ++Q +   H+L+  L   ++ ++ ++                             
Sbjct: 277 KAWKRDQQGKYTKHTLMQTLT-KQESAVTALXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 336

Query: 371 WKVVCEKKAHKMAVLCVCLTGEFLCSGSADKSIGIWRREAFGRLCKIGVINGHEGPIKCL 430
             ++   K HK+AVLC+ + G  + SGSADK+I +W+R+     C + V+ GH GP+KCL
Sbjct: 337 GGIL---KGHKLAVLCLEVAGSLVFSGSADKTICVWKRDGNIHTC-LSVLTGHTGPVKCL 396

Query: 431 -----QAAPNGVGEGFLLYSGSLDKSLRVWWVSK 458
                + A     + +++YSGSLDKS++VW VS+
Sbjct: 397 AVEADREASERRDKKWIVYSGSLDKSVKVWGVSE 420

[Close]

BLAST of CsaV3_5G024560 vs. Swiss-Prot
Match: sp|Q9FKR9|C3H59_ARATH (Zinc finger CCCH domain-containing protein 59 OS=Arabidopsis thaliana OX=3702 GN=ZFWD3 PE=2 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 2.9e-05
Identity = 28/109 (25.69%), Postives = 46/109 (42.20%), Query Frame = 0


Query: 171 GSVKAVVAVGNRVFTAHQDGKIRVWKVSRRSENNFRLVNTLPTAKDYLGKFMKQSNYVQT 230
           G V A+ A    +F     G I VWK +    + F+ + +L                   
Sbjct: 267 GQVHAMTAANGMLFAGTSSGSILVWKATDSESDPFKYLTSLEG----------------- 326

Query: 231 RRHHKILWIEHADTISCLAVHNGLIYSGSWDKTLKVWRVSDLKCLESIK 280
                     H+  ++C  V   ++YSGS DKT+KVW ++ L+C  ++K
Sbjct: 327 ---------HHSGEVTCFVVGGEVLYSGSVDKTIKVWDLNTLQCRMTLK 349

[Close]

BLAST of CsaV3_5G024560 vs. Swiss-Prot
Match: sp|Q0D0X6|LIS1_ASPTN (Nuclear distribution protein nudF OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=nudF PE=3 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 3.8e-05
Identity = 42/136 (30.88%), Postives = 61/136 (44.85%), Query Frame = 0


Query: 342 SNDGKWVFGGISDGFLMGWE--------------------KIGETMSWKVVCEKKAHKMA 401
           S DGKW+  G  D  +  WE                          S++ +     HK A
Sbjct: 254 SFDGKWLVAGGRDQAVTVWEVSSAEPRAALLGHDNDVQCCVFAPPASYEYLATLAGHKKA 313

Query: 402 VLCVCLTGEFLCSGSADKSIGIWRREAFGRLCKIGVINGHEGPIKCLQAAPNGVGEGFLL 458
            L    + EF+ +GS DK+I +W  EA GRL K   + GH+  I+ L   P+G      L
Sbjct: 314 PL-ASSSSEFIATGSRDKTIKLW--EARGRLIK--TLVGHDNWIRGLVFHPSGK----YL 373

[Close]

BLAST of CsaV3_5G024560 vs. Swiss-Prot
Match: sp|Q6GQT6|SCAP_MOUSE (Sterol regulatory element-binding protein cleavage-activating protein OS=Mus musculus OX=10090 GN=Scap PE=1 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 6.4e-05
Identity = 40/159 (25.16%), Postives = 65/159 (40.88%), Query Frame = 0


Query: 122  PLAVLPGHIGSVSSLALCGEFILSASQGKDIIVWQQPDLRVFTRFGHGEGSVKAVVAVGN 181
            PLA  P   GS+ SL L G  I+       + VW   +  +          + A+V +  
Sbjct: 956  PLAWTPSTAGSIWSLELQGNLIVVGRSSGRLEVWDAIEGVLCCSNEEISSGITALVFLDR 1015

Query: 182  RVFTAHQDGKIRVWKV-SRRSENNFRLVNTLPTAKDYLGKFMKQSNYVQTRRHHKILWIE 241
            R+  A  +G +  + + +  S +  +   T              SN V   R H +    
Sbjct: 1016 RIVAARLNGSLDFFSLETHTSLSPLQFRGTPGRGSSPSSSVYSSSNTVTCHRTHTVP-CA 1075

Query: 242  HADTISCLAVHNGLIYSGSWDKTLKVWRVSDLKCLESIK 280
            H   I+ L    G + +GS D TL+V+R+ D  CL ++K
Sbjct: 1076 HQKPITALRAAAGRLVTGSQDHTLRVFRLDDSCCLFTLK 1113

[Close]

BLAST of CsaV3_5G024560 vs. Swiss-Prot
Match: sp|A6RT32|CIAO1_BOTFB (Probable cytosolic iron-sulfur protein assembly protein 1 OS=Botryotinia fuckeliana (strain B05.10) OX=332648 GN=cia1 PE=3 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 1.9e-04
Identity = 36/100 (36.00%), Postives = 49/100 (49.00%), Query Frame = 0


Query: 309 RRKKEEEQVEEEMHSLLGILEGHKDVSINSVVVSNDGKWVFGGISDGFLMGWEKIGE--T 368
           RR  EE++ E +      +LEGH D  I +V  S  G+W+     D  +  WE+IGE   
Sbjct: 126 RRGGEEDEDEGDDWEFSIVLEGH-DSEIKNVAYSPSGQWLASCSRDKTIWIWEEIGEEGE 185

Query: 369 MSWKVVCEKKAHKMAVLCVCL-----TGEFLCSGSADKSI 402
             ++ V   + HK  V CVC       GE L SGS D +I
Sbjct: 186 DEFETVAVLQDHKADVKCVCWRKDDGNGEVLASGSYDDTI 224

[Close]

BLAST of CsaV3_5G024560 vs. TrEMBL
Match: tr|A0A0A0KN90|A0A0A0KN90_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G440090 PE=4 SV=1)

HSP 1 Score: 770.0 bits (1987), Expect = 3.2e-219
Identity = 429/429 (100.00%), Postives = 429/429 (100.00%), Query Frame = 0


Query: 64  MDPPVTEAATPLLHSTSSESSSDADDHTPPTSYRFHFKGIKFPCDFLNKSPSGYSSYRPL 123
           MDPPVTEAATPLLHSTSSESSSDADDHTPPTSYRFHFKGIKFPCDFLNKSPSGYSSYRPL
Sbjct: 1   MDPPVTEAATPLLHSTSSESSSDADDHTPPTSYRFHFKGIKFPCDFLNKSPSGYSSYRPL 60

Query: 124 AVLPGHIGSVSSLALCGEFILSASQGKDIIVWQQPDLRVFTRFGHGEGSVKAVVAVGNRV 183
           AVLPGHIGSVSSLALCGEFILSASQGKDIIVWQQPDLRVFTRFGHGEGSVKAVVAVGNRV
Sbjct: 61  AVLPGHIGSVSSLALCGEFILSASQGKDIIVWQQPDLRVFTRFGHGEGSVKAVVAVGNRV 120

Query: 184 FTAHQDGKIRVWKVSRRSENNFRLVNTLPTAKDYLGKFMKQSNYVQTRRHHKILWIEHAD 243
           FTAHQDGKIRVWKVSRRSENNFRLVNTLPTAKDYLGKFMKQSNYVQTRRHHKILWIEHAD
Sbjct: 121 FTAHQDGKIRVWKVSRRSENNFRLVNTLPTAKDYLGKFMKQSNYVQTRRHHKILWIEHAD 180

Query: 244 TISCLAVHNGLIYSGSWDKTLKVWRVSDLKCLESIKAXXXXXXXXXXXXXXXXXXXXXXX 303
           TISCLAVHNGLIYSGSWDKTLKVWRVSDLKCLESIKAXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 TISCLAVHNGLIYSGSWDKTLKVWRVSDLKCLESIKAXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 304 XXXXGRRKKEEEQVEEEMHSLLGILEGHKDVSINSVVVSNDGKWVFGGISDGFLMGWEKI 363
           XXXXGRRKKEEEQVEEEMHSLLGILEGHKDVSINSVVVSNDGKWVFGGISDGFLMGWEKI
Sbjct: 241 XXXXGRRKKEEEQVEEEMHSLLGILEGHKDVSINSVVVSNDGKWVFGGISDGFLMGWEKI 300

Query: 364 GETMSWKVVCEKKAHKMAVLCVCLTGEFLCSGSADKSIGIWRREAFGRLCKIGVINGHEG 423
           GETMSWKVVCEKKAHKMAVLCVCLTGEFLCSGSADKSIGIWRREAFGRLCKIGVINGHEG
Sbjct: 301 GETMSWKVVCEKKAHKMAVLCVCLTGEFLCSGSADKSIGIWRREAFGRLCKIGVINGHEG 360

Query: 424 PIKCLQAAPNGVGEGFLLYSGSLDKSLRVWWVSKXXXXXXXXXXXXXXXXXXXXXAFVAE 483
           PIKCLQAAPNGVGEGFLLYSGSLDKSLRVWWVSKXXXXXXXXXXXXXXXXXXXXXAFVAE
Sbjct: 361 PIKCLQAAPNGVGEGFLLYSGSLDKSLRVWWVSKXXXXXXXXXXXXXXXXXXXXXAFVAE 420

Query: 484 DSKKSIISF 493
           DSKKSIISF
Sbjct: 421 DSKKSIISF 429

[Close]

BLAST of CsaV3_5G024560 vs. TrEMBL
Match: tr|A0A1S3CR76|A0A1S3CR76_CUCME (myosin heavy chain kinase B OS=Cucumis melo OX=3656 GN=LOC103503407 PE=4 SV=1)

HSP 1 Score: 749.2 bits (1933), Expect = 5.9e-213
Identity = 400/429 (93.24%), Postives = 404/429 (94.17%), Query Frame = 0


Query: 64  MDPPVTEAATPLLHSTSSESSSDADDHTPPTSYRFHFKGIKFPCDFLNKSPSGYSSYRPL 123
           MDPPVTEAATPLLHSTSSESSSDADDHTPP+SYRF+FK +KFPCDFLNKS SGYSSYRPL
Sbjct: 1   MDPPVTEAATPLLHSTSSESSSDADDHTPPSSYRFNFKDVKFPCDFLNKSLSGYSSYRPL 60

Query: 124 AVLPGHIGSVSSLALCGEFILSASQGKDIIVWQQPDLRVFTRFGHGEGSVKAVVAVGNRV 183
           AVLPGHIGSVS LALCGEFILSASQGKDIIVWQQPDLRVFTRFGHGEGSVKAVVAVGNRV
Sbjct: 61  AVLPGHIGSVSCLALCGEFILSASQGKDIIVWQQPDLRVFTRFGHGEGSVKAVVAVGNRV 120

Query: 184 FTAHQDGKIRVWKVSRRSENNFRLVNTLPTAKDYLGKFMKQSNYVQTRRHHKILWIEHAD 243
           FTAHQDGKIRVWKVSRRSENNFRLVNTLPTAKDYLGKFMKQSNYVQTRRHHKILWIEHAD
Sbjct: 121 FTAHQDGKIRVWKVSRRSENNFRLVNTLPTAKDYLGKFMKQSNYVQTRRHHKILWIEHAD 180

Query: 244 TISCLAVHNGLIYSGSWDKTLKVWRVSDLKCLESIKAXXXXXXXXXXXXXXXXXXXXXXX 303
           TISCLAVHNGLIYSGSWDKTLKVWRVSDLKCLESIKAXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 TISCLAVHNGLIYSGSWDKTLKVWRVSDLKCLESIKAXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 304 XXXXGRRKKEEEQVEEEMHSLLGILEGHKDVSINSVVVSNDGKWVFGGISDGFLMGWEKI 363
           XXXXGRRKK+EEQVEEEMHSLLGILEGHKDVSINSVVVSNDGKWVFGGISDGFLMGWEKI
Sbjct: 241 XXXXGRRKKQEEQVEEEMHSLLGILEGHKDVSINSVVVSNDGKWVFGGISDGFLMGWEKI 300

Query: 364 GETMSWKVVCEKKAHKMAVLCVCLTGEFLCSGSADKSIGIWRREAFGRLCKIGVINGHEG 423
           GETMSWKVVCEKKAHKMAVLCVCL GEFLCSGSADKSIGIWRREAFGRLCKIGVINGHEG
Sbjct: 301 GETMSWKVVCEKKAHKMAVLCVCLMGEFLCSGSADKSIGIWRREAFGRLCKIGVINGHEG 360

Query: 424 PIKCLQAAPNGVGEGFLLYSGSLDKSLRVWWVSKXXXXXXXXXXXXXXXXXXXXXAFVAE 483
           PIKCLQAAPNGVGEGFLLYSGSLDKSLRVWWVSK                     AFVAE
Sbjct: 361 PIKCLQAAPNGVGEGFLLYSGSLDKSLRVWWVSK----ASPSSSSSSYSSAMGVGAFVAE 420

Query: 484 DSKKSIISF 493
           DSKKSIISF
Sbjct: 421 DSKKSIISF 425

[Close]

BLAST of CsaV3_5G024560 vs. TrEMBL
Match: tr|B9GWK1|B9GWK1_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_003G202700v3 PE=4 SV=2)

HSP 1 Score: 531.2 bits (1367), Expect = 2.5e-147
Identity = 295/407 (72.48%), Postives = 336/407 (82.56%), Query Frame = 0


Query: 56  PLSLSLSSMDPPVT-----EAATPLLHSTSSESSSDADDHTPPTSYRFHFKGIKFPCDFL 115
           P+ L +S +  P T      A + +  STSS SS  + + +P TS+RF  + +     + 
Sbjct: 5   PMDLFVSEITTPSTPLLFAAATSTIGMSTSSSSSICSSEDSPATSFRFELQDVGCR-SYP 64

Query: 116 NKSPSGYSSYRPLAVLPGHIGSVSSLALCGEFILSASQGKDIIVWQQPDLRVFTRFGHGE 175
           +KS SG  SYRPLAVL GH+GSVS LALCGEFILSASQGKDIIVWQQPDLR+FT+FG G+
Sbjct: 65  SKSLSGAYSYRPLAVLSGHVGSVSCLALCGEFILSASQGKDIIVWQQPDLRMFTKFGQGD 124

Query: 176 GSVKAVVAVGNRVFTAHQDGKIRVWKVSRRSENNFRLVNTLPTAKDYLGKFMKQSNYVQT 235
           GSVKA+V VG++VFTAHQD +IRVWKVSRRSEN FRLV+T+PT KDYLGKFMKQSNYVQT
Sbjct: 125 GSVKALVTVGSKVFTAHQDSRIRVWKVSRRSENVFRLVDTMPTTKDYLGKFMKQSNYVQT 184

Query: 236 RRHHKILWIEHADTISCLAVHNGLIYSGSWDKTLKVWRVSDLKCLESIKAXXXXXXXXXX 295
           RRHHK LWIEHAD+ISCL V+NGLIYSGSWDKTLKVWR+SDLKCLESIKAXXXXXXXXXX
Sbjct: 185 RRHHKKLWIEHADSISCLTVYNGLIYSGSWDKTLKVWRISDLKCLESIKAXXXXXXXXXX 244

Query: 296 XXXXXXXXXXXXXXXXXGRRKKEEEQVEEEMHSLLGILEGHKDVSINSVVVSNDGKWVFG 355
           XXXXXXXXXXXXXXXXX +  K         HSL GILEGHKDVS+NSV+VS+DGKWV+G
Sbjct: 245 XXXXXXXXXXXXXXXXXXKEGKSS-------HSLKGILEGHKDVSLNSVIVSDDGKWVYG 304

Query: 356 GISDGFLMGWEKIGETMSWKVVCEKKAHKMAVLCVCLTGEFLCSGSADKSIGIWRREAFG 415
           G SDGF+MGWE   + +SWK+V E KAH+MAVLC+CL GEFL SGSADKSI IW+REAFG
Sbjct: 305 GASDGFVMGWEGSYDFLSWKLVSETKAHQMAVLCMCLMGEFLFSGSADKSISIWKREAFG 364

Query: 416 RLCKIGVINGHEGPIKCLQAAPNGVGEGFLLYSGSLDKSLRVWWVSK 458
           +L KIGVINGHEGP+KCLQA+PN VG GFLLYSG LDKSLRVWWV K
Sbjct: 365 KLSKIGVINGHEGPVKCLQASPNNVGSGFLLYSGGLDKSLRVWWVPK 403

[Close]

BLAST of CsaV3_5G024560 vs. TrEMBL
Match: tr|A0A218X111|A0A218X111_PUNGR (Uncharacterized protein OS=Punica granatum OX=22663 GN=CDL15_Pgr016150 PE=4 SV=1)

HSP 1 Score: 531.2 bits (1367), Expect = 2.5e-147
Identity = 291/403 (72.21%), Postives = 340/403 (84.37%), Query Frame = 0


Query: 66  PPVTE---AATPLLHST------SSESSSDADDHTPPTSYRFHFKGIKF--PCDFLNKSP 125
           PP++E   + TPLL++T      SS SSS+ DD +P +S+RF    +K+  PC       
Sbjct: 7   PPISEPKVSTTPLLYATASSSCSSSRSSSEIDD-SPGSSHRFEVVDVKYQLPC---TPDS 66

Query: 126 SGYSSYRPLAVLPGHIGSVSSLALCGEFILSASQGKDIIVWQQPDLRVFTRFGHGEGSVK 185
           SG  S+R LAVL GH+GSVS LA+CGEFILSASQGKDIIVWQQPDLR+FT+FG G+GSVK
Sbjct: 67  SGPQSHRSLAVLSGHVGSVSCLAVCGEFILSASQGKDIIVWQQPDLRLFTKFGQGDGSVK 126

Query: 186 AVVAVGNRVFTAHQDGKIRVWKVSRRSENNFRLVNTLPTAKDYLGKFMKQSNYVQTRRHH 245
           A+V VGN+VFTAHQD +IRVWKVSRRSEN FRL++TLPT KDYLGKFMKQSNYVQTRRHH
Sbjct: 127 ALVTVGNKVFTAHQDSRIRVWKVSRRSENVFRLIDTLPTTKDYLGKFMKQSNYVQTRRHH 186

Query: 246 KILWIEHADTISCLAVHNGLIYSGSWDKTLKVWRVSDLKCLESIKAXXXXXXXXXXXXXX 305
           K LWIEH+D+ISCLAVHNGL+YSGSWDKTLKVWR+SDLKCLESIKAXXXXXXXXXXXXXX
Sbjct: 187 KKLWIEHSDSISCLAVHNGLVYSGSWDKTLKVWRISDLKCLESIKAXXXXXXXXXXXXXX 246

Query: 306 XXXXXXXXXXXXXGRRKKEEEQVEEEMHSLLGILEGHKDVSINSVVVSNDGKWVFGGISD 365
           XXXXXXXXXXXXXG+ K+ +       HSL GILEGHKDVS+NSVVVS+DGKWV+GG SD
Sbjct: 247 XXXXXXXXXXXXXGKGKEGKSS-----HSLKGILEGHKDVSVNSVVVSDDGKWVYGGGSD 306

Query: 366 GFLMGWEKIGETMSWKVVCEKKAHKMAVLCVCLTGEFLCSGSADKSIGIWRREAFGRLCK 425
           GF+MGWE   +  SWK+V E KAH+MAVLC+CL GE+LCSGSADKSIGIW+REAFG++ +
Sbjct: 307 GFVMGWEGSCDFNSWKLVSETKAHQMAVLCMCLVGEYLCSGSADKSIGIWKREAFGKISR 366

Query: 426 IGVINGHEGPIKCLQAAPNGVGEGFLLYSGSLDKSLRVWWVSK 458
           +G++ GHEGP+KCLQA+   VG+GF+LYSGSLDKSLRVWWV K
Sbjct: 367 VGIVRGHEGPVKCLQASSVSVGDGFMLYSGSLDKSLRVWWVPK 400

[Close]

BLAST of CsaV3_5G024560 vs. TrEMBL
Match: tr|V4TFP3|V4TFP3_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10031607mg PE=4 SV=1)

HSP 1 Score: 529.6 bits (1363), Expect = 7.3e-147
Identity = 288/370 (77.84%), Postives = 315/370 (85.14%), Query Frame = 0


Query: 91  TPPTSYRFHF---KGIKFPCDFLNKSPSGYSSYRPLAVLPGHIGSVSSLALCGEFILSAS 150
           TP  S+RF        K PC           S+R LAVL GH+GSVSSLALCGEFILSAS
Sbjct: 61  TPQGSHRFELLKQVDYKMPC----------KSHRSLAVLSGHVGSVSSLALCGEFILSAS 120

Query: 151 QGKDIIVWQQPDLRVFTRFGHGEGSVKAVVAVGNRVFTAHQDGKIRVWKVSRRSENNFRL 210
           QGKDIIVWQQPDLR+FT+FGHG+GSVKAVV VGN+VFTAHQD +IRVWKVSR SEN FRL
Sbjct: 121 QGKDIIVWQQPDLRMFTKFGHGDGSVKAVVTVGNKVFTAHQDSRIRVWKVSRSSENVFRL 180

Query: 211 VNTLPTAKDYLGKFMKQSNYVQTRRHHKILWIEHADTISCLAVHNGLIYSGSWDKTLKVW 270
           V+TLPT KDYLGKFMKQSNYVQTRRHHK LWIEHAD+ISCL V+NGLIYSGSWDKTLKVW
Sbjct: 181 VDTLPTTKDYLGKFMKQSNYVQTRRHHKRLWIEHADSISCLTVYNGLIYSGSWDKTLKVW 240

Query: 271 RVSDLKCLESIKAXXXXXXXXXXXXXXXXXXXXXXXXXXXGRRKKEEEQVEEEMHSLLGI 330
           RV+DLKCLESIKAXXXXXXXXXXXXXXXXXXXXXXXXXXXG+     E  +   HSL GI
Sbjct: 241 RVADLKCLESIKAXXXXXXXXXXXXXXXXXXXXXXXXXXXGK-----ELGKSHCHSLKGI 300

Query: 331 LEGHKDVSINSVVVSNDGKWVFGGISDGFLMGWEKIGETMSWKVVCEKKAHKMAVLCVCL 390
           LEGHKDVS+NSVVVS+DGKWV+GG SDGF+MGWE   E + WK+ CE KAH+MAVLCVCL
Sbjct: 301 LEGHKDVSLNSVVVSDDGKWVYGGGSDGFVMGWEGNVEIVRWKLACETKAHEMAVLCVCL 360

Query: 391 TGEFLCSGSADKSIGIWRREAFGRLCKIGVINGHEGPIKCLQAAPNGVGEGFLLYSGSLD 450
            GEFLCSGSADKSIGIW+REAFG+LC++G I GHEGP+KCLQA+PN VG GFLLYSGSLD
Sbjct: 361 VGEFLCSGSADKSIGIWKREAFGKLCRVGAITGHEGPVKCLQASPNAVGGGFLLYSGSLD 415

Query: 451 KSLRVWWVSK 458
           KSLRVWWVSK
Sbjct: 421 KSLRVWWVSK 415

The following BLAST results are available for this feature:

BLAST of CsaV3_5G024560 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004140344.2	4.9e-219	100.00	PREDICTED: myosin heavy chain kinase B [Cucumis sativus] >KGN51095.1 hypothetica...	[more]
XP_008465822.1	8.9e-213	93.24	PREDICTED: myosin heavy chain kinase B [Cucumis melo]	[more]
XP_022993783.1	3.0e-184	82.79	protein JINGUBANG [Cucurbita maxima]	[more]
XP_022939422.1	2.1e-182	81.86	protein JINGUBANG isoform X1 [Cucurbita moschata]	[more]
XP_023551252.1	4.0e-181	81.25	protein JINGUBANG isoform X1 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsaV3_5G024560 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G51930.1	1.5e-129	72.62	Transducin/WD40 repeat-like superfamily protein	[more]
AT1G49450.1	2.8e-51	39.42	Transducin/WD40 repeat-like superfamily protein	[more]
AT1G47610.1	3.8e-48	38.82	Transducin/WD40 repeat-like superfamily protein	[more]
AT5G50120.1	5.4e-47	33.79	Transducin/WD40 repeat-like superfamily protein	[more]
AT1G24130.1	1.0e-45	34.65	Transducin/WD40 repeat-like superfamily protein	[more]

BLAST of CsaV3_5G024560 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|O48716\|JGB_ARATH	8.9e-39	30.24	Protein JINGUBANG OS=Arabidopsis thaliana OX=3702 GN=JGB PE=1 SV=1	[more]
sp\|Q9FKR9\|C3H59_ARATH	2.9e-05	25.69	Zinc finger CCCH domain-containing protein 59 OS=Arabidopsis thaliana OX=3702 GN...	[more]
sp\|Q0D0X6\|LIS1_ASPTN	3.8e-05	30.88	Nuclear distribution protein nudF OS=Aspergillus terreus (strain NIH 2624 / FGSC...	[more]
sp\|Q6GQT6\|SCAP_MOUSE	6.4e-05	25.16	Sterol regulatory element-binding protein cleavage-activating protein OS=Mus mus...	[more]
sp\|A6RT32\|CIAO1_BOTFB	1.9e-04	36.00	Probable cytosolic iron-sulfur protein assembly protein 1 OS=Botryotinia fuckeli...	[more]

BLAST of CsaV3_5G024560 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KN90\|A0A0A0KN90_CUCSA	3.2e-219	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G440090 PE=4 SV=1	[more]
tr\|A0A1S3CR76\|A0A1S3CR76_CUCME	5.9e-213	93.24	myosin heavy chain kinase B OS=Cucumis melo OX=3656 GN=LOC103503407 PE=4 SV=1	[more]
tr\|B9GWK1\|B9GWK1_POPTR	2.5e-147	72.48	Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_003G202700v3 PE=...	[more]
tr\|A0A218X111\|A0A218X111_PUNGR	2.5e-147	72.21	Uncharacterized protein OS=Punica granatum OX=22663 GN=CDL15_Pgr016150 PE=4 SV=1	[more]
tr\|V4TFP3\|V4TFP3_9ROSI	7.3e-147	77.84	Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10031607mg PE=4 ...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR036322	WD40_repeat_dom_sf
IPR017986	WD40_repeat_dom
IPR015943	WD40/YVTN_repeat-like_dom_sf
IPR001680	WD40_repeat

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_5G024560.1	CsaV3_5G024560.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 271..308 e-value: 0.026 score: 23.7 coord: 411..454 e-value: 0.02 score: 24.1 coord: 368..405 e-value: 0.005 score: 26.0 coord: 158..196 e-value: 3.1 score: 13.9 coord: 232..268 e-value: 0.0083 score: 25.3 coord: 119..156 e-value: 0.01 score: 25.0 coord: 321..361 e-value: 0.23 score: 20.5
IPR001680	WD40 repeat	PFAM	PF00400	WD40	coord: 415..453 e-value: 0.044 score: 14.6 coord: 324..360 e-value: 0.002 score: 18.8 coord: 161..196 e-value: 0.16 score: 12.8 coord: 240..267 e-value: 0.023 score: 15.5
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 418..463 score: 10.676
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 238..277 score: 9.272
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	G3DSA:2.130.10.10		coord: 113..224 e-value: 4.4E-12 score: 47.3
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	G3DSA:2.130.10.10		coord: 225..323 e-value: 8.4E-17 score: 63.1
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	G3DSA:2.130.10.10		coord: 324..489 e-value: 7.4E-22 score: 79.7
None	No IPR available	PANTHER	PTHR22844:SF223	SUBFAMILY NOT NAMED	coord: 75..469
None	No IPR available	PANTHER	PTHR22844	F-BOX AND WD40 DOMAIN PROTEIN	coord: 75..469
None	No IPR available	CDD	cd00200	WD40	coord: 122..453 e-value: 1.56343E-44 score: 158.267
IPR017986	WD40-repeat-containing domain	PROSITE	PS50294	WD_REPEATS_REGION	coord: 126..463 score: 23.387
IPR036322	WD40-repeat-containing domain superfamily	SUPERFAMILY	SSF50978	WD40 repeat-like	coord: 241..457 coord: 119..198

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_5G024560	CSPI05G15520	Wild cucumber (PI 183967)	cpicucB284
CsaV3_5G024560	Cucsa.335480	Cucumber (Gy14) v1	cgycucB517
CsaV3_5G024560	CmaCh15G008310	Cucurbita maxima (Rimu)	cmacucB0357
CsaV3_5G024560	CmoCh15G008620	Cucurbita moschata (Rifu)	cmocucB0352
CsaV3_5G024560	Cla005897	Watermelon (97103) v1	cucwmB435
CsaV3_5G024560	MELO3C005144	Melon (DHL92) v3.5.1	cucmeB362
CsaV3_5G024560	Bhi12G000981	Wax gourd	cucwgoB465

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_5G024560	Silver-seed gourd	carcucB0514
CsaV3_5G024560	Silver-seed gourd	carcucB0867
CsaV3_5G024560	Cucumber (Gy14) v2	cgybcucB232
CsaV3_5G024560	Cucurbita maxima (Rimu)	cmacucB0865
CsaV3_5G024560	Cucurbita moschata (Rifu)	cmocucB0852
CsaV3_5G024560	Cucurbita pepo (Zucchini)	cpecucB0214
CsaV3_5G024560	Cucurbita pepo (Zucchini)	cpecucB0523
CsaV3_5G024560	Bottle gourd (USVL1VR-Ls)	cuclsiB347
CsaV3_5G024560	Melon (DHL92) v3.6.1	cucmedB354
CsaV3_5G024560	Watermelon (Charleston Gray)	cucwcgB387
CsaV3_5G024560	Watermelon (97103) v2	cucwmbB353