CsaV3_5G024460 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_5G024460
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionBeta-galactosidase
Locationchr5 : 19316342 .. 19316991 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGGATTGGTCCTTACGTGTGTGCCGAGTGGAACTACGGAGGCTTTCCAGTGTGGTTGCACAATATGCCAGGAATCCAACTACGAACTAACAATCAAGTTTACAAGAATGAAATGCAAACTTTCACGACAAAGATAGTAAATATGTGTAAACAAGCCAATCTCTTTGCTTCACAAGGAGGGCCAATAATATTAGCTCAAATCGAGAATGAGTATGGAAATGTGATGACACCAGCTTATGGAGATGCAGGAAAAGCATACATCAATTGGTGTGCTCAAATGGCCGAATCTCTCAATATTGGCGTTCCATGGATCATGTGCCAACAAAGTGATGCCCCACAACCTATGATTAATACATGCAATGGATTCTATTGTGATAACTTTACTCCAAACAATCCTAAGAGCCCAAAAATGTTCACTGAAAATTGGGTGGGATGGTTCAAGAAATGGGGCGACAAAGACCCTTATAGAACTGCAGAAGATGTAGCATTTTCTGTGGCAAGATTTTTTCAATCTGGTGGTGTCTTCAACAATTATTACATGTATCATGGAGGCACCAACTTTGGAAGGACATCGGGAGGTCCATTCATCACTACATCTTACGACTACAACGCCCCACTTGATGAGTATGGGAACTTGAATCAACCTAA

mRNA sequence

ATGAGGATTGGTCCTTACGTGTGTGCCGAGTGGAACTACGGAGGCTTTCCAGTGTGGTTGCACAATATGCCAGGAATCCAACTACGAACTAACAATCAAGTTTACAAGAATGAAATGCAAACTTTCACGACAAAGATAGTAAATATGTGTAAACAAGCCAATCTCTTTGCTTCACAAGGAGGGCCAATAATATTAGCTCAAATCGAGAATGAGTATGGAAATGTGATGACACCAGCTTATGGAGATGCACCAACTTTGGAAGGACATCGGGAGGTCCATTCATCACTACATCTTACGACTACAACGCCCCACTTGATGAGTATGGGAACTTGA

Coding sequence (CDS)

ATGAGGATTGGTCCTTACGTGTGTGCCGAGTGGAACTACGGAGGCTTTCCAGTGTGGTTGCACAATATGCCAGGAATCCAACTACGAACTAACAATCAAGTTTACAAGAATGAAATGCAAACTTTCACGACAAAGATAGTAAATATGTGTAAACAAGCCAATCTCTTTGCTTCACAAGGAGGGCCAATAATATTAGCTCAAATCGAGAATGAGTATGGAAATGTGATGACACCAGCTTATGGAGATGCACCAACTTTGGAAGGACATCGGGAGGTCCATTCATCACTACATCTTACGACTACAACGCCCCACTTGATGAGTATGGGAACTTGA

Protein sequence

MRIGPYVCAEWNYGGFPVWLHNMPGIQLRTNNQVYKNEMQTFTTKIVNMCKQANLFASQGGPIILAQIENEYGNVMTPAYGDAPTLEGHREVHSSLHLTTTTPHLMSMGT
Homology
[Close]
BLAST of CsaV3_5G024460 vs. NCBI nr
Match: XP_008437703.1 (PREDICTED: LOW QUALITY PROTEIN: beta-galactosidase 7-like [Cucumis melo])

HSP 1 Score: 183.0 bits (463), Expect = 5.7e-43
Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0 

Query: 1   MRIGPYVCAEWNYGGFPVWLHNMPGIQLRTNNQVYKNEMQTFTTKIVNMCKQANLFASQG 60
           MRIGPYVCAEWNYGGFPVWLHNMPGIQLRTNNQVYKNEMQTFTTKIVNMCKQANLFASQG
Sbjct: 108 MRIGPYVCAEWNYGGFPVWLHNMPGIQLRTNNQVYKNEMQTFTTKIVNMCKQANLFASQG 167

Query: 61  GPIILAQIENEYGNVMTPAYGDA 84
           GPIILAQIENEYGNVMTPAYGDA
Sbjct: 168 GPIILAQIENEYGNVMTPAYGDA 190

[Close]
BLAST of CsaV3_5G024460 vs. NCBI nr
Match: XP_008437707.1 (PREDICTED: beta-galactosidase 7-like, partial [Cucumis melo])

HSP 1 Score: 183.0 bits (463), Expect = 5.7e-43
Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0 

Query: 1   MRIGPYVCAEWNYGGFPVWLHNMPGIQLRTNNQVYKNEMQTFTTKIVNMCKQANLFASQG 60
           MRIGPYVCAEWNYGGFPVWLHNMPGIQLRTNNQVYKNEMQTFTTKIVNMCKQANLFASQG
Sbjct: 64  MRIGPYVCAEWNYGGFPVWLHNMPGIQLRTNNQVYKNEMQTFTTKIVNMCKQANLFASQG 123

Query: 61  GPIILAQIENEYGNVMTPAYGDA 84
           GPIILAQIENEYGNVMTPAYGDA
Sbjct: 124 GPIILAQIENEYGNVMTPAYGDA 146

[Close]
BLAST of CsaV3_5G024460 vs. NCBI nr
Match: XP_008452141.1 (PREDICTED: LOW QUALITY PROTEIN: beta-galactosidase 7-like [Cucumis melo])

HSP 1 Score: 183.0 bits (463), Expect = 5.7e-43
Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0 

Query: 1   MRIGPYVCAEWNYGGFPVWLHNMPGIQLRTNNQVYKNEMQTFTTKIVNMCKQANLFASQG 60
           MRIGPYVCAEWNYGGFPVWLHNMPGIQLRTNNQVYKNEMQTFTTKIVNMCKQANLFASQG
Sbjct: 108 MRIGPYVCAEWNYGGFPVWLHNMPGIQLRTNNQVYKNEMQTFTTKIVNMCKQANLFASQG 167

Query: 61  GPIILAQIENEYGNVMTPAYGDA 84
           GPIILAQIENEYGNVMTPAYGDA
Sbjct: 168 GPIILAQIENEYGNVMTPAYGDA 190

[Close]
BLAST of CsaV3_5G024460 vs. NCBI nr
Match: KGN50376.1 (hypothetical protein Csa_5G169120 [Cucumis sativus])

HSP 1 Score: 183.0 bits (463), Expect = 5.7e-43
Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0 

Query: 1   MRIGPYVCAEWNYGGFPVWLHNMPGIQLRTNNQVYKNEMQTFTTKIVNMCKQANLFASQG 60
           MRIGPYVCAEWNYGGFPVWLHNMPGIQLRTNNQVYKNEMQTFTTKIVNMCKQANLFASQG
Sbjct: 108 MRIGPYVCAEWNYGGFPVWLHNMPGIQLRTNNQVYKNEMQTFTTKIVNMCKQANLFASQG 167

Query: 61  GPIILAQIENEYGNVMTPAYGDA 84
           GPIILAQIENEYGNVMTPAYGDA
Sbjct: 168 GPIILAQIENEYGNVMTPAYGDA 190

[Close]
BLAST of CsaV3_5G024460 vs. NCBI nr
Match: XP_011648551.1 (PREDICTED: beta-galactosidase 15-like [Cucumis sativus] >KGN66624.1 hypothetical protein Csa_1G650110 [Cucumis sativus])

HSP 1 Score: 183.0 bits (463), Expect = 5.7e-43
Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0 

Query: 1   MRIGPYVCAEWNYGGFPVWLHNMPGIQLRTNNQVYKNEMQTFTTKIVNMCKQANLFASQG 60
           MRIGPYVCAEWNYGGFPVWLHNMPGIQLRTNNQVYKNEMQTFTTKIVNMCKQANLFASQG
Sbjct: 108 MRIGPYVCAEWNYGGFPVWLHNMPGIQLRTNNQVYKNEMQTFTTKIVNMCKQANLFASQG 167

Query: 61  GPIILAQIENEYGNVMTPAYGDA 84
           GPIILAQIENEYGNVMTPAYGDA
Sbjct: 168 GPIILAQIENEYGNVMTPAYGDA 190

[Close]
BLAST of CsaV3_5G024460 vs. TAIR10
Match: AT1G31740.1 (beta-galactosidase 15)

HSP 1 Score: 137.5 bits (345), Expect = 5.0e-33
Identity = 62/83 (74.70%), Postives = 70/83 (84.34%), Query Frame = 0 

Query: 1   MRIGPYVCAEWNYGGFPVWLHNMPGIQLRTNNQVYKNEMQTFTTKIVNMCKQANLFASQG 60
           +RIGPYVCAEWNYGGFPVWLHNMPG++ RT N  + NEMQ FTT IV M K+  LFASQG
Sbjct: 131 LRIGPYVCAEWNYGGFPVWLHNMPGMEFRTTNTAFMNEMQNFTTMIVEMVKKEKLFASQG 190

Query: 61  GPIILAQIENEYGNVMTPAYGDA 84
           GPIILAQIENEYGNV+  +YG+A
Sbjct: 191 GPIILAQIENEYGNVI-GSYGEA 212

[Close]
BLAST of CsaV3_5G024460 vs. TAIR10
Match: AT5G20710.1 (beta-galactosidase 7)

HSP 1 Score: 134.4 bits (337), Expect = 4.2e-32
Identity = 61/81 (75.31%), Postives = 69/81 (85.19%), Query Frame = 0 

Query: 1   MRIGPYVCAEWNYGGFPVWLHNMPGIQLRTNNQVYKNEMQTFTTKIVNMCKQANLFASQG 60
           +RIGPYVCAEWNYGGFPVWLHNMP ++ RT N  + NEMQ FTTKIV M K+  LFASQG
Sbjct: 114 LRIGPYVCAEWNYGGFPVWLHNMPNMKFRTVNPSFMNEMQNFTTKIVKMMKEEKLFASQG 173

Query: 61  GPIILAQIENEYGNVMTPAYG 82
           GPIILAQIENEYGNV++ +YG
Sbjct: 174 GPIILAQIENEYGNVIS-SYG 193

[Close]
BLAST of CsaV3_5G024460 vs. TAIR10
Match: AT2G28470.1 (beta-galactosidase 8)

HSP 1 Score: 134.0 bits (336), Expect = 5.5e-32
Identity = 66/110 (60.00%), Postives = 78/110 (70.91%), Query Frame = 0 

Query: 1   MRIGPYVCAEWNYGGFPVWLHNMPGIQLRTNNQVYKNEMQTFTTKIVNMCKQANLFASQG 60
           +RIGPYVCAEWNYGGFPVWLH +PGI+ RT+N+ +K EMQ FTTKIV++ KQ  L+ASQG
Sbjct: 118 LRIGPYVCAEWNYGGFPVWLHFVPGIKFRTDNEPFKEEMQRFTTKIVDLMKQEKLYASQG 177

Query: 61  GPIILAQIENEYGNVMTPAYGDAPTLEGHREVHSSLHLTTTTPHLMSMGT 111
           GPIIL+QIENEYGN+   AYG A           +L L T  P  M   T
Sbjct: 178 GPIILSQIENEYGNI-DSAYGAAAKSYIKWSASMALSLDTGVPWNMCQQT 226

[Close]
BLAST of CsaV3_5G024460 vs. TAIR10
Match: AT2G32810.1 (beta galactosidase 9)

HSP 1 Score: 119.8 bits (299), Expect = 1.1e-27
Identity = 50/75 (66.67%), Postives = 64/75 (85.33%), Query Frame = 0 

Query: 1   MRIGPYVCAEWNYGGFPVWLHNMPGIQLRTNNQVYKNEMQTFTTKIVNMCKQANLFASQG 60
           +RIGPYVCAEWN+GGFPVWL ++PGI+ RT+N+ +K EMQ F TKIV++ ++A LF  QG
Sbjct: 124 LRIGPYVCAEWNFGGFPVWLRDIPGIEFRTDNEPFKKEMQKFVTKIVDLMREAKLFCWQG 183

Query: 61  GPIILAQIENEYGNV 76
           GPII+ QIENEYG+V
Sbjct: 184 GPIIMLQIENEYGDV 198

[Close]
BLAST of CsaV3_5G024460 vs. TAIR10
Match: AT3G13750.1 (beta galactosidase 1)

HSP 1 Score: 119.0 bits (297), Expect = 1.8e-27
Identity = 53/73 (72.60%), Postives = 60/73 (82.19%), Query Frame = 0 

Query: 1   MRIGPYVCAEWNYGGFPVWLHNMPGIQLRTNNQVYKNEMQTFTTKIVNMCKQANLFASQG 60
           +RIGPYVCAEWN+GGFPVWL  +PGI  RT+N  +K +MQ FTTKIVNM K   LF SQG
Sbjct: 120 LRIGPYVCAEWNFGGFPVWLKYIPGISFRTDNGPFKAQMQRFTTKIVNMMKAERLFESQG 179

Query: 61  GPIILAQIENEYG 74
           GPIIL+QIENEYG
Sbjct: 180 GPIILSQIENEYG 192

[Close]
BLAST of CsaV3_5G024460 vs. Swiss-Prot
Match: sp|Q9C6W4|BGA15_ARATH (Beta-galactosidase 15 OS=Arabidopsis thaliana OX=3702 GN=BGAL15 PE=2 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 9.0e-32
Identity = 62/83 (74.70%), Postives = 70/83 (84.34%), Query Frame = 0 

Query: 1   MRIGPYVCAEWNYGGFPVWLHNMPGIQLRTNNQVYKNEMQTFTTKIVNMCKQANLFASQG 60
           +RIGPYVCAEWNYGGFPVWLHNMPG++ RT N  + NEMQ FTT IV M K+  LFASQG
Sbjct: 108 LRIGPYVCAEWNYGGFPVWLHNMPGMEFRTTNTAFMNEMQNFTTMIVEMVKKEKLFASQG 167

Query: 61  GPIILAQIENEYGNVMTPAYGDA 84
           GPIILAQIENEYGNV+  +YG+A
Sbjct: 168 GPIILAQIENEYGNVI-GSYGEA 189

[Close]
BLAST of CsaV3_5G024460 vs. Swiss-Prot
Match: sp|P49676|BGAL_BRAOL (Beta-galactosidase OS=Brassica oleracea OX=3712 PE=2 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 2.0e-31
Identity = 62/81 (76.54%), Postives = 71/81 (87.65%), Query Frame = 0 

Query: 1   MRIGPYVCAEWNYGGFPVWLHNMPGIQLRTNNQVYKNEMQTFTTKIVNMCKQANLFASQG 60
           +RIGPYVCAEWNYGGFPVWLHNMP ++ RT N  + NEMQ FTTKIVNM K+ +LFASQG
Sbjct: 113 LRIGPYVCAEWNYGGFPVWLHNMPDMKFRTINPGFMNEMQNFTTKIVNMMKEESLFASQG 172

Query: 61  GPIILAQIENEYGNVMTPAYG 82
           GPIILAQIENEYGNV++ +YG
Sbjct: 173 GPIILAQIENEYGNVIS-SYG 192

[Close]
BLAST of CsaV3_5G024460 vs. Swiss-Prot
Match: sp|Q9SCV5|BGAL7_ARATH (Beta-galactosidase 7 OS=Arabidopsis thaliana OX=3702 GN=BGAL7 PE=2 SV=2)

HSP 1 Score: 134.4 bits (337), Expect = 7.6e-31
Identity = 61/81 (75.31%), Postives = 69/81 (85.19%), Query Frame = 0 

Query: 1   MRIGPYVCAEWNYGGFPVWLHNMPGIQLRTNNQVYKNEMQTFTTKIVNMCKQANLFASQG 60
           +RIGPYVCAEWNYGGFPVWLHNMP ++ RT N  + NEMQ FTTKIV M K+  LFASQG
Sbjct: 114 LRIGPYVCAEWNYGGFPVWLHNMPNMKFRTVNPSFMNEMQNFTTKIVKMMKEEKLFASQG 173

Query: 61  GPIILAQIENEYGNVMTPAYG 82
           GPIILAQIENEYGNV++ +YG
Sbjct: 174 GPIILAQIENEYGNVIS-SYG 193

[Close]
BLAST of CsaV3_5G024460 vs. Swiss-Prot
Match: sp|Q9SCV4|BGAL8_ARATH (Beta-galactosidase 8 OS=Arabidopsis thaliana OX=3702 GN=BGAL8 PE=2 SV=2)

HSP 1 Score: 134.0 bits (336), Expect = 1.0e-30
Identity = 66/110 (60.00%), Postives = 78/110 (70.91%), Query Frame = 0 

Query: 1   MRIGPYVCAEWNYGGFPVWLHNMPGIQLRTNNQVYKNEMQTFTTKIVNMCKQANLFASQG 60
           +RIGPYVCAEWNYGGFPVWLH +PGI+ RT+N+ +K EMQ FTTKIV++ KQ  L+ASQG
Sbjct: 118 LRIGPYVCAEWNYGGFPVWLHFVPGIKFRTDNEPFKEEMQRFTTKIVDLMKQEKLYASQG 177

Query: 61  GPIILAQIENEYGNVMTPAYGDAPTLEGHREVHSSLHLTTTTPHLMSMGT 111
           GPIIL+QIENEYGN+   AYG A           +L L T  P  M   T
Sbjct: 178 GPIILSQIENEYGNI-DSAYGAAAKSYIKWSASMALSLDTGVPWNMCQQT 226

[Close]
BLAST of CsaV3_5G024460 vs. Swiss-Prot
Match: sp|Q10NX8|BGAL6_ORYSJ (Beta-galactosidase 6 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0255100 PE=1 SV=2)

HSP 1 Score: 129.0 bits (323), Expect = 3.2e-29
Identity = 62/106 (58.49%), Postives = 76/106 (71.70%), Query Frame = 0 

Query: 1   MRIGPYVCAEWNYGGFPVWLHNMPGIQLRTNNQVYKNEMQTFTTKIVNMCKQANLFASQG 60
           +RIGPYVCAEWNYGGFPVWLH +PGI+ RT+N+ +K EMQ FT K+V+  K A L+ASQG
Sbjct: 119 LRIGPYVCAEWNYGGFPVWLHFVPGIKFRTDNEAFKAEMQRFTEKVVDTMKGAGLYASQG 178

Query: 61  GPIILAQIENEYGNVMTPAYGDAPTLEGHREVHSSLHLTTTTPHLM 107
           GPIIL+QIENEYGN+   AYG A           ++ L T  P +M
Sbjct: 179 GPIILSQIENEYGNI-DSAYGAAGKAYMRWAAGMAVSLDTGVPWVM 223

[Close]
BLAST of CsaV3_5G024460 vs. TrEMBL
Match: tr|A0A1S3BT39|A0A1S3BT39_CUCME (Beta-galactosidase OS=Cucumis melo OX=3656 GN=LOC103493239 PE=3 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 3.8e-43
Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0 

Query: 1   MRIGPYVCAEWNYGGFPVWLHNMPGIQLRTNNQVYKNEMQTFTTKIVNMCKQANLFASQG 60
           MRIGPYVCAEWNYGGFPVWLHNMPGIQLRTNNQVYKNEMQTFTTKIVNMCKQANLFASQG
Sbjct: 108 MRIGPYVCAEWNYGGFPVWLHNMPGIQLRTNNQVYKNEMQTFTTKIVNMCKQANLFASQG 167

Query: 61  GPIILAQIENEYGNVMTPAYGDA 84
           GPIILAQIENEYGNVMTPAYGDA
Sbjct: 168 GPIILAQIENEYGNVMTPAYGDA 190

[Close]
BLAST of CsaV3_5G024460 vs. TrEMBL
Match: tr|A0A1S3AUN1|A0A1S3AUN1_CUCME (Beta-galactosidase OS=Cucumis melo OX=3656 GN=LOC103483052 PE=3 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 3.8e-43
Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0 

Query: 1   MRIGPYVCAEWNYGGFPVWLHNMPGIQLRTNNQVYKNEMQTFTTKIVNMCKQANLFASQG 60
           MRIGPYVCAEWNYGGFPVWLHNMPGIQLRTNNQVYKNEMQTFTTKIVNMCKQANLFASQG
Sbjct: 64  MRIGPYVCAEWNYGGFPVWLHNMPGIQLRTNNQVYKNEMQTFTTKIVNMCKQANLFASQG 123

Query: 61  GPIILAQIENEYGNVMTPAYGDA 84
           GPIILAQIENEYGNVMTPAYGDA
Sbjct: 124 GPIILAQIENEYGNVMTPAYGDA 146

[Close]
BLAST of CsaV3_5G024460 vs. TrEMBL
Match: tr|A0A1S3AV92|A0A1S3AV92_CUCME (Beta-galactosidase OS=Cucumis melo OX=3656 GN=LOC103483048 PE=3 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 3.8e-43
Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0 

Query: 1   MRIGPYVCAEWNYGGFPVWLHNMPGIQLRTNNQVYKNEMQTFTTKIVNMCKQANLFASQG 60
           MRIGPYVCAEWNYGGFPVWLHNMPGIQLRTNNQVYKNEMQTFTTKIVNMCKQANLFASQG
Sbjct: 108 MRIGPYVCAEWNYGGFPVWLHNMPGIQLRTNNQVYKNEMQTFTTKIVNMCKQANLFASQG 167

Query: 61  GPIILAQIENEYGNVMTPAYGDA 84
           GPIILAQIENEYGNVMTPAYGDA
Sbjct: 168 GPIILAQIENEYGNVMTPAYGDA 190

[Close]
BLAST of CsaV3_5G024460 vs. TrEMBL
Match: tr|A0A0A0M006|A0A0A0M006_CUCSA (Beta-galactosidase OS=Cucumis sativus OX=3659 GN=Csa_1G650110 PE=3 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 3.8e-43
Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0 

Query: 1   MRIGPYVCAEWNYGGFPVWLHNMPGIQLRTNNQVYKNEMQTFTTKIVNMCKQANLFASQG 60
           MRIGPYVCAEWNYGGFPVWLHNMPGIQLRTNNQVYKNEMQTFTTKIVNMCKQANLFASQG
Sbjct: 108 MRIGPYVCAEWNYGGFPVWLHNMPGIQLRTNNQVYKNEMQTFTTKIVNMCKQANLFASQG 167

Query: 61  GPIILAQIENEYGNVMTPAYGDA 84
           GPIILAQIENEYGNVMTPAYGDA
Sbjct: 168 GPIILAQIENEYGNVMTPAYGDA 190

[Close]
BLAST of CsaV3_5G024460 vs. TrEMBL
Match: tr|A0A0A0KRM6|A0A0A0KRM6_CUCSA (Beta-galactosidase OS=Cucumis sativus OX=3659 GN=Csa_5G169120 PE=3 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 3.8e-43
Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0 

Query: 1   MRIGPYVCAEWNYGGFPVWLHNMPGIQLRTNNQVYKNEMQTFTTKIVNMCKQANLFASQG 60
           MRIGPYVCAEWNYGGFPVWLHNMPGIQLRTNNQVYKNEMQTFTTKIVNMCKQANLFASQG
Sbjct: 108 MRIGPYVCAEWNYGGFPVWLHNMPGIQLRTNNQVYKNEMQTFTTKIVNMCKQANLFASQG 167

Query: 61  GPIILAQIENEYGNVMTPAYGDA 84
           GPIILAQIENEYGNVMTPAYGDA
Sbjct: 168 GPIILAQIENEYGNVMTPAYGDA 190

The following BLAST results are available for this feature:
BLAST of CsaV3_5G024460 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008437703.15.7e-43100.00PREDICTED: LOW QUALITY PROTEIN: beta-galactosidase 7-like [Cucumis melo][more]
XP_008437707.15.7e-43100.00PREDICTED: beta-galactosidase 7-like, partial [Cucumis melo][more]
XP_008452141.15.7e-43100.00PREDICTED: LOW QUALITY PROTEIN: beta-galactosidase 7-like [Cucumis melo][more]
KGN50376.15.7e-43100.00hypothetical protein Csa_5G169120 [Cucumis sativus][more]
XP_011648551.15.7e-43100.00PREDICTED: beta-galactosidase 15-like [Cucumis sativus] >KGN66624.1 hypothetical... [more]
BLAST of CsaV3_5G024460 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G31740.15.0e-3374.70beta-galactosidase 15[more]
AT5G20710.14.2e-3275.31beta-galactosidase 7[more]
AT2G28470.15.5e-3260.00beta-galactosidase 8[more]
AT2G32810.11.1e-2766.67beta galactosidase 9[more]
AT3G13750.11.8e-2772.60beta galactosidase 1[more]
BLAST of CsaV3_5G024460 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9C6W4|BGA15_ARATH9.0e-3274.70Beta-galactosidase 15 OS=Arabidopsis thaliana OX=3702 GN=BGAL15 PE=2 SV=1[more]
sp|P49676|BGAL_BRAOL2.0e-3176.54Beta-galactosidase OS=Brassica oleracea OX=3712 PE=2 SV=1[more]
sp|Q9SCV5|BGAL7_ARATH7.6e-3175.31Beta-galactosidase 7 OS=Arabidopsis thaliana OX=3702 GN=BGAL7 PE=2 SV=2[more]
sp|Q9SCV4|BGAL8_ARATH1.0e-3060.00Beta-galactosidase 8 OS=Arabidopsis thaliana OX=3702 GN=BGAL8 PE=2 SV=2[more]
sp|Q10NX8|BGAL6_ORYSJ3.2e-2958.49Beta-galactosidase 6 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0255100 PE... [more]
BLAST of CsaV3_5G024460 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3BT39|A0A1S3BT39_CUCME3.8e-43100.00Beta-galactosidase OS=Cucumis melo OX=3656 GN=LOC103493239 PE=3 SV=1[more]
tr|A0A1S3AUN1|A0A1S3AUN1_CUCME3.8e-43100.00Beta-galactosidase OS=Cucumis melo OX=3656 GN=LOC103483052 PE=3 SV=1[more]
tr|A0A1S3AV92|A0A1S3AV92_CUCME3.8e-43100.00Beta-galactosidase OS=Cucumis melo OX=3656 GN=LOC103483048 PE=3 SV=1[more]
tr|A0A0A0M006|A0A0A0M006_CUCSA3.8e-43100.00Beta-galactosidase OS=Cucumis sativus OX=3659 GN=Csa_1G650110 PE=3 SV=1[more]
tr|A0A0A0KRM6|A0A0A0KRM6_CUCSA3.8e-43100.00Beta-galactosidase OS=Cucumis sativus OX=3659 GN=Csa_5G169120 PE=3 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR017853Glycoside_hydrolase_SF
IPR019801Glyco_hydro_35_CS
IPR031330Gly_Hdrlase_35_cat
IPR001944Glycoside_Hdrlase_35
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0005975 carbohydrate metabolic process
cellular_component GO:0005575 cellular_component
molecular_function GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_5G024460.1CsaV3_5G024460.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001944Glycoside hydrolase, family 35PRINTSPR00742GLHYDRLASE35coord: 58..73
score: 78.68
coord: 1..20
score: 80.29
IPR001944Glycoside hydrolase, family 35PANTHERPTHR23421BETA-GALACTOSIDASE RELATEDcoord: 1..83
IPR031330Glycoside hydrolase 35, catalytic domainPFAMPF01301Glyco_hydro_35coord: 1..87
e-value: 8.5E-32
score: 110.9
NoneNo IPR availableGENE3DG3DSA:3.20.20.80coord: 1..104
e-value: 3.5E-28
score: 100.9
NoneNo IPR availablePANTHERPTHR23421:SF80SUBFAMILY NOT NAMEDcoord: 1..83
IPR019801Glycoside hydrolase, family 35, conserved sitePROSITEPS01182GLYCOSYL_HYDROL_F35coord: 60..72
IPR017853Glycoside hydrolase superfamilySUPERFAMILYSSF51445(Trans)glycosidasescoord: 1..82

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_5G024460Cucumber (Gy14) v2cgybcucB232
CsaV3_5G024460Cucumber (Gy14) v1cgycucB510
CsaV3_5G024460Cucurbita maxima (Rimu)cmacucB0357
CsaV3_5G024460Cucurbita maxima (Rimu)cmacucB0865
CsaV3_5G024460Cucurbita moschata (Rifu)cmocucB0352
CsaV3_5G024460Cucurbita moschata (Rifu)cmocucB0852
CsaV3_5G024460Cucurbita pepo (Zucchini)cpecucB0214
CsaV3_5G024460Cucurbita pepo (Zucchini)cpecucB0523
CsaV3_5G024460Wild cucumber (PI 183967)cpicucB284
CsaV3_5G024460Bottle gourd (USVL1VR-Ls)cuclsiB347
CsaV3_5G024460Melon (DHL92) v3.5.1cucmeB362
CsaV3_5G024460Melon (DHL92) v3.6.1cucmedB354
CsaV3_5G024460Watermelon (Charleston Gray)cucwcgB387
CsaV3_5G024460Watermelon (97103) v1cucwmB435
CsaV3_5G024460Watermelon (97103) v2cucwmbB353
CsaV3_5G024460Wax gourdcucwgoB465
CsaV3_5G024460Silver-seed gourdcarcucB0514
CsaV3_5G024460Silver-seed gourdcarcucB0867