CsaV3_5G023970 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATTGTACTATTTTTACATTCACCTTTTTCTTCTCAATTTTATACATTATGGCGAATTTTTCGAATAATGTGATAGTGTGAGAAAATAAAGATGTAAAAGGTGGTGGTGTTGTCCATGTTGTCATCCATCTCACAGTAAGCAAGCAAAGCAGAGTCACATAAATTGATATATAAATCCATCATGCATCCATTACAATTCCCTCATTAACAAAACAACAACCATAAATACATAATGTCCTACAAATTACAGGTTTCATTCCAATTCCATTACACATAACATAGCCTAAAAACTCAAAAAAAGAAAAAAAAAAGAAAAAAAAACAAGCATGACCCCTCTTCGTTCACAACTTCTTATCCTCCTCTTCGGCCTTTCTTTCTCATTCCTCCCCTTCTTTTCCCTCTCCGCCATAGACACCTTCGTCTTCGGTGGCTGCACCCAACTTCGCTACTCCCCAAACTCTGGTTACGAGTCAAATCTCAACTCACTACTCACCTCCCTAGTCAACTCAGCCACATACTCCTCCTACAACAACTACACCATCCAAGGCTCCTCACCACAAGACGCCCTCTCGGGTCTCTACCAATGTCGGGGCGACCTCTCGATGCCAGACTGCGCCACATGCATTGCCCGCGCTGTGACGCAGCTAGGTGGACTCTGCTCAGACACATGTGGCGGGGCGCTGCAGCTGGAGGGATGCTACGTGAAGTACGACAACTCGAGCTTTCTCGGGGTGGAGGATAAGACGGTGGTGCTGAAGAAGTGTGGGCCGTCGGTGGGGTACGAGGAGGAGGCGATGGGGCGGAGGGATGCGGTGTTAGGGGCGTTGGTGGGGGCGAGTGGGGGGTATAGAGTGGGCGGGGCTGGGAAAGTACAAGGAGTTGCTCAGTGTGTAGGGGATTTGAGTGGGAGTGAGTGTCAGGATTGTTTAGGAGAGGCTATTGGACGGTTGAAAAGCGATTGTGGGACGGCGGATTTTGGGGATATGTTTTTGGGAAAGTGTTATGCAAGGTATAACACTCATGGGCCTCCTGTTTTCTCTAAGGCCCATCATGGTAAGCCATTTCTCACCACTACTACTACTACTACTGCCATTTCCTTGGTAATCCCTTTCTCTTTCTTTTCCTTTTTCTTTTCTGTTCTCTTTTTATAAATTAATATTCATCGAAGTAATTATTCAGTAGAATTAACTCCTTTTTTTTTTTTTTTTTTTTTATAAATTTCCGGAATTTATACCTTGCTTGATATTCAACATTATTTTAAAAAAAATTATATATAGAAATTTATAAATACTCTTTTTTGTTCTATTACCTAAACATATTATAAAAACATTTGAAGATTATTTTAGATTCTTCAGAATTGAAGTGTGTTTTCAAGGGTTGGGAAAAAAGTTCACCAAAGTTGTGAAGAAAACTAAACATAATTTAATGGTAATCATATGAAACCTCGGTCTTTGAACATTAATATTCTCTTTCATAAACATTTGTTTTATTTTTTCTGTTTTCTATTGTTTTCTAATATTTAATTTTTAAAAACCAAATCAAGAACTATTTTATTTTAAAAAAAATTGATCCAGAGAATAAAAGATAGATGTGAGAAAAAGAATAAACAAAATTTTTAAAAATAAAAAGTAGAAAACAAAATCGATTGATTACTGAACAAAGTCTTAATGTATAAAAATTTCATCAAAACTAACCATAATTTTCTTTTACCTAACAATTATTCTAAAAATTGGCTACATATTATTGTGAAGAATTGAATTAAAAACAAAAAAAATAAAAGCAAACGAACTAAATTAAGAAAAATAATAACTTGGAGATCAAATTGATAGGTTTACGAAGGTTGGAGGGCTAAAAATGTTTTAAGAAGAAAATATTATTTTAGTTTTAACATTATATTGTTTGGGATTGTAACGTGGTGAATTGAACAGATAAATCTAATGGTGATGGTGAGAAGACATTTGCGATTATCATTGGGCTATTAGCTGGAGTTGCTCTTGTTATCATTTTTCTTGTCTTTATTAGAAAGGTGTTTGAACGATCTGGTAATTCAATTTTCCACCCTCTCTTTTATTTTCTTTATTTAAGAAATTTGTTTGAATGAGTTAAAATATTTCTAAATAATGTAAAATTTTATTTTATATCAATAATAGAGATTCAAATTAAGGTAAAATAGTTAGTGAACTTTTTTTTTAAAAAAAAAAAGATTAAAAGTATACTTTTTAGGTAAAGCATTCTACAAAATTTAAAACAGTAGCTTTTATCAACTTGTTTTTTTTTTTTTTTCATTTGTAAAACAACACACTTTTCTCATAGCACATTATTCCAAATTACTTTTTTTGTTCTTTTGATAACTAAAGTTACCCATGATATATATACACACACATAGACATATATATTTGTATATATATTTGCATATTTATATTATATATATATTGTTTTGAATAAATAGGATGCATGGATAGAGTTGGTATTGAAGAATTTGGTTTGTTTTGTTGGTAATGCAGGTAAATAATAATAAAATATAGCAAATGGAAAAGCTTTAATTTACAAATTCAACCTCTAAAGGTGAAGGATATTGGGTTGCTGCTGGTTGGTTTTTTTTTTTTTTTGGCTTAATTCCACATTTTAGTTTTTTACTTTATTTATATTGTTTGGATTTGCTTTTATATTATTTGGTGTTTCCCAAGTGAAGTTTGTGTAATATTTAGTTGGCACAAAAGAAATGCCATAGAGAGATGAAAAAGAGAGAAATATTTCTTCTCTGTTATTGTGGAAACTGTGGTGCATTCTTTGTAAAAGATGGAGAGAATTTTTCATTTTTTTAAAAATATAATAATACTACTCTACTTACACTGTTGGTATTTATCTCTTTTTTTTTTTGCTTTCTATATTTTATCTTTTGTTGGAACTGGTACTCGACAATGTTGTGAAGCAACAATTTGGCATCTCAATTTTGGATGCCTAGAAAATAAACTCCAGAAACTTAGCTTGGACATCTGATGAATTAATCACCTAGATGAAAGTTGTCTAGAAGATGGTCACCTAGATAGAATGCCTAAATTGATCACCTGATTGG ATGACCCCTCTTCGTTCACAACTTCTTATCCTCCTCTTCGGCCTTTCTTTCTCATTCCTCCCCTTCTTTTCCCTCTCCGCCATAGACACCTTCGTCTTCGGTGGCTGCACCCAACTTCGCTACTCCCCAAACTCTGGTTACGAGTCAAATCTCAACTCACTACTCACCTCCCTAGTCAACTCAGCCACATACTCCTCCTACAACAACTACACCATCCAAGGCTCCTCACCACAAGACGCCCTCTCGGGTCTCTACCAATGTCGGGGCGACCTCTCGATGCCAGACTGCGCCACATGCATTGCCCGCGCTGTGACGCAGCTAGGTGGACTCTGCTCAGACACATGTGGCGGGGCGCTGCAGCTGGAGGGATGCTACGTGAAGTACGACAACTCGAGCTTTCTCGGGGTGGAGGATAAGACGGTGGTGCTGAAGAAGTGTGGGCCGTCGGTGGGGTACGAGGAGGAGGCGATGGGGCGGAGGGATGCGGTGTTAGGGGCGTTGGTGGGGGCGAGTGGGGGGTATAGAGTGGGCGGGGCTGGGAAAGTACAAGGAGTTGCTCAGTGTGTAGGGGATTTGAGTGGGAGTGAGTGTCAGGATTGTTTAGGAGAGGCTATTGGACGGTTGAAAAGCGATTGTGGGACGGCGGATTTTGGGGATATGTTTTTGGGAAAGTGTTATGCAAGGTATAACACTCATGGGCCTCCTGTTTTCTCTAAGGCCCATCATGGTAAGCCATTTCTCACCACTACTACTACTACTACTGCCATTTCCTTGATAAATCTAATGGTGATGGTGAGAAGACATTTGCGATTATCATTGGGCTATTAG ATGACCCCTCTTCGTTCACAACTTCTTATCCTCCTCTTCGGCCTTTCTTTCTCATTCCTCCCCTTCTTTTCCCTCTCCGCCATAGACACCTTCGTCTTCGGTGGCTGCACCCAACTTCGCTACTCCCCAAACTCTGGTTACGAGTCAAATCTCAACTCACTACTCACCTCCCTAGTCAACTCAGCCACATACTCCTCCTACAACAACTACACCATCCAAGGCTCCTCACCACAAGACGCCCTCTCGGGTCTCTACCAATGTCGGGGCGACCTCTCGATGCCAGACTGCGCCACATGCATTGCCCGCGCTGTGACGCAGCTAGGTGGACTCTGCTCAGACACATGTGGCGGGGCGCTGCAGCTGGAGGGATGCTACGTGAAGTACGACAACTCGAGCTTTCTCGGGGTGGAGGATAAGACGGTGGTGCTGAAGAAGTGTGGGCCGTCGGTGGGGTACGAGGAGGAGGCGATGGGGCGGAGGGATGCGGTGTTAGGGGCGTTGGTGGGGGCGAGTGGGGGGTATAGAGTGGGCGGGGCTGGGAAAGTACAAGGAGTTGCTCAGTGTGTAGGGGATTTGAGTGGGAGTGAGTGTCAGGATTGTTTAGGAGAGGCTATTGGACGGTTGAAAAGCGATTGTGGGACGGCGGATTTTGGGGATATGTTTTTGGGAAAGTGTTATGCAAGGTATAACACTCATGGGCCTCCTGTTTTCTCTAAGGCCCATCATGGTAAGCCATTTCTCACCACTACTACTACTACTACTGCCATTTCCTTGATAAATCTAATGGTGATGGTGAGAAGACATTTGCGATTATCATTGGGCTATTAG MTPLRSQLLILLFGLSFSFLPFFSLSAIDTFVFGGCTQLRYSPNSGYESNLNSLLTSLVNSATYSSYNNYTIQGSSPQDALSGLYQCRGDLSMPDCATCIARAVTQLGGLCSDTCGGALQLEGCYVKYDNSSFLGVEDKTVVLKKCGPSVGYEEEAMGRRDAVLGALVGASGGYRVGGAGKVQGVAQCVGDLSGSECQDCLGEAIGRLKSDCGTADFGDMFLGKCYARYNTHGPPVFSKAHHGKPFLTTTTTTTAISLINLMVMVRRHLRLSLGY
BLAST of CsaV3_5G023970 vs. NCBI nr
Match: XP_004151212.1 (PREDICTED: cysteine-rich repeat secretory protein 60 [Cucumis sativus] >KGN51039.1 hypothetical protein Csa_5G416260 [Cucumis sativus]) HSP 1 Score: 490.7 bits (1262), Expect = 3.2e-135 Identity = 243/244 (99.59%), Postives = 243/244 (99.59%), Query Frame = 0
BLAST of CsaV3_5G023970 vs. NCBI nr
Match: XP_008460508.1 (PREDICTED: cysteine-rich repeat secretory protein 60 [Cucumis melo]) HSP 1 Score: 477.2 bits (1227), Expect = 3.6e-131 Identity = 241/250 (96.40%), Postives = 243/250 (97.20%), Query Frame = 0
BLAST of CsaV3_5G023970 vs. NCBI nr
Match: XP_022938393.1 (cysteine-rich repeat secretory protein 60-like isoform X2 [Cucurbita moschata]) HSP 1 Score: 452.6 bits (1163), Expect = 9.6e-124 Identity = 226/266 (84.96%), Postives = 238/266 (89.47%), Query Frame = 0
BLAST of CsaV3_5G023970 vs. NCBI nr
Match: XP_022938392.1 (cysteine-rich repeat secretory protein 60-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 431.0 bits (1107), Expect = 3.0e-117 Identity = 211/239 (88.28%), Postives = 222/239 (92.89%), Query Frame = 0
BLAST of CsaV3_5G023970 vs. NCBI nr
Match: XP_023550862.1 (cysteine-rich repeat secretory protein 60-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 413.7 bits (1062), Expect = 5.0e-112 Identity = 197/216 (91.20%), Postives = 206/216 (95.37%), Query Frame = 0
BLAST of CsaV3_5G023970 vs. TAIR10
Match: AT5G37660.2 (plasmodesmata-located protein 7) HSP 1 Score: 321.6 bits (823), Expect = 4.6e-88 Identity = 166/248 (66.94%), Postives = 191/248 (77.02%), Query Frame = 0
BLAST of CsaV3_5G023970 vs. TAIR10
Match: AT2G01660.1 (plasmodesmata-located protein 6) HSP 1 Score: 276.2 bits (705), Expect = 2.2e-74 Identity = 139/227 (61.23%), Postives = 178/227 (78.41%), Query Frame = 0
BLAST of CsaV3_5G023970 vs. TAIR10
Match: AT1G70690.1 (Receptor-like protein kinase-related family protein) HSP 1 Score: 225.7 bits (574), Expect = 3.5e-59 Identity = 107/213 (50.23%), Postives = 150/213 (70.42%), Query Frame = 0
BLAST of CsaV3_5G023970 vs. TAIR10
Match: AT3G60720.1 (plasmodesmata-located protein 8) HSP 1 Score: 167.5 bits (423), Expect = 1.1e-41 Identity = 85/204 (41.67%), Postives = 132/204 (64.71%), Query Frame = 0
BLAST of CsaV3_5G023970 vs. TAIR10
Match: AT1G04520.1 (plasmodesmata-located protein 2) HSP 1 Score: 97.4 bits (241), Expect = 1.4e-20 Identity = 67/241 (27.80%), Postives = 109/241 (45.23%), Query Frame = 0
BLAST of CsaV3_5G023970 vs. Swiss-Prot
Match: sp|Q0WPN8|CRR60_ARATH (Cysteine-rich repeat secretory protein 60 OS=Arabidopsis thaliana OX=3702 GN=CRRSP60 PE=1 SV=1) HSP 1 Score: 321.6 bits (823), Expect = 8.4e-87 Identity = 166/248 (66.94%), Postives = 191/248 (77.02%), Query Frame = 0
BLAST of CsaV3_5G023970 vs. Swiss-Prot
Match: sp|Q9ZU94|CRR12_ARATH (Cysteine-rich repeat secretory protein 12 OS=Arabidopsis thaliana OX=3702 GN=CRRSP12 PE=1 SV=2) HSP 1 Score: 276.2 bits (705), Expect = 4.0e-73 Identity = 139/227 (61.23%), Postives = 178/227 (78.41%), Query Frame = 0
BLAST of CsaV3_5G023970 vs. Swiss-Prot
Match: sp|Q8GUJ2|CRRS2_ARATH (Cysteine-rich repeat secretory protein 2 OS=Arabidopsis thaliana OX=3702 GN=CRRSP2 PE=1 SV=1) HSP 1 Score: 225.7 bits (574), Expect = 6.3e-58 Identity = 107/213 (50.23%), Postives = 150/213 (70.42%), Query Frame = 0
BLAST of CsaV3_5G023970 vs. Swiss-Prot
Match: sp|Q6NKQ9|CRR15_ARATH (Cysteine-rich repeat secretory protein 15 OS=Arabidopsis thaliana OX=3702 GN=CRRSP15 PE=1 SV=1) HSP 1 Score: 167.5 bits (423), Expect = 2.0e-40 Identity = 85/204 (41.67%), Postives = 132/204 (64.71%), Query Frame = 0
BLAST of CsaV3_5G023970 vs. Swiss-Prot
Match: sp|Q6NM73|CRRS3_ARATH (Cysteine-rich repeat secretory protein 3 OS=Arabidopsis thaliana OX=3702 GN=CRRSP3 PE=1 SV=1) HSP 1 Score: 97.4 bits (241), Expect = 2.6e-19 Identity = 67/241 (27.80%), Postives = 109/241 (45.23%), Query Frame = 0
BLAST of CsaV3_5G023970 vs. TrEMBL
Match: tr|A0A0A0KQB1|A0A0A0KQB1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G416260 PE=4 SV=1) HSP 1 Score: 490.7 bits (1262), Expect = 2.1e-135 Identity = 243/244 (99.59%), Postives = 243/244 (99.59%), Query Frame = 0
BLAST of CsaV3_5G023970 vs. TrEMBL
Match: tr|A0A1S3CC73|A0A1S3CC73_CUCME (cysteine-rich repeat secretory protein 60 OS=Cucumis melo OX=3656 GN=LOC103499308 PE=4 SV=1) HSP 1 Score: 477.2 bits (1227), Expect = 2.4e-131 Identity = 241/250 (96.40%), Postives = 243/250 (97.20%), Query Frame = 0
BLAST of CsaV3_5G023970 vs. TrEMBL
Match: tr|A0A2H5NUE8|A0A2H5NUE8_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_076830 PE=4 SV=1) HSP 1 Score: 361.3 bits (926), Expect = 1.9e-96 Identity = 177/228 (77.63%), Postives = 197/228 (86.40%), Query Frame = 0
BLAST of CsaV3_5G023970 vs. TrEMBL
Match: tr|U5FK95|U5FK95_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_017G130800v3 PE=4 SV=1) HSP 1 Score: 359.4 bits (921), Expect = 7.3e-96 Identity = 183/238 (76.89%), Postives = 199/238 (83.61%), Query Frame = 0
BLAST of CsaV3_5G023970 vs. TrEMBL
Match: tr|A0A2P4JE15|A0A2P4JE15_QUESU (Isoform 2 of cysteine-rich repeat secretory protein 60 OS=Quercus suber OX=58331 GN=CFP56_78920 PE=4 SV=1) HSP 1 Score: 359.0 bits (920), Expect = 9.6e-96 Identity = 177/237 (74.68%), Postives = 202/237 (85.23%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: None |