CsaV3_5G023680 (gene) Cucumber (Chinese Long) v3

NameCsaV3_5G023680
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr5 : 18100039 .. 18100379 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACGCCATGATAAAGTTGCATCGTCTATCATGTACAAACCCAAGAAGTCGCAGCAGCAGTGGGCGCCATGATAGAGTTGGATCATCTATCATGCACAAACCCAAAAAAGTCGAAGAAGCAGTGGGCGCCATGATAGAGTTGCATCATCTATCATGTACAAACCCAAGAAGTCACAGCAGTAATAGGCACTATTTTAGAGTTGCATCGTCTATCATGTACAAACCCAAAGAAGTCACAGCAGCAATGGGCGTCATGAGAGAGTTGCATCGTCTATCATGTACAAACCCAAGAAGTCGCAGCAGCAGTGGGCGCCATGATAGAGTTGCATCGTCTATCAT

mRNA sequence

ATGGACGCCATGATAAAGTTGCATCGTCTATCATGTACAAACCCAAGAAGTCGCAGCAGCAGTGGGCGCCATGATAGAGTTGGATCATCTATCATGCACAAACCCAAAAAAGTCGAAGAAGCAGTGGGCGCCATGATAGAGTTGCATCATCTATCATGTACAAACCCAAGAAGTCACAGCAGTAATAGGCACTATTTTAGAGTTGCATCGTCTATCATGTACAAACCCAAAGAAGTCACAGCAGCAATGGGCGTCATGAGAGAGTTGCATCGTCTATCATGTACAAACCCAAGAAGTCGCAGCAGCAGTGGGCGCCATGATAGAGTTGCATCGTCTATCAT

Coding sequence (CDS)

ATGGACGCCATGATAAAGTTGCATCGTCTATCATGTACAAACCCAAGAAGTCGCAGCAGCAGTGGGCGCCATGATAGAGTTGGATCATCTATCATGCACAAACCCAAAAAAGTCGAAGAAGCAGTGGGCGCCATGATAGAGTTGCATCATCTATCATGTACAAACCCAAGAAGTCACAGCAGTAATAGGCACTATTTTAGAGTTGCATCGTCTATCATGTACAAACCCAAAGAAGTCACAGCAGCAATGGGCGTCATGAGAGAGTTGCATCGTCTATCATGTACAAACCCAAGAAGTCGCAGCAGCAGTGGGCGCCATGATAGAGTTGCATCGTCTATCAT

Protein sequence

MDAMIKLHRLSCTNPRSRSSSGRHDRVGSSIMHKPKKVEEAVGAMIELHHLSCTNPRSHSSNRHYFRVASSIMYKPKEVTAAMGVMRELHRLSCTNPRSRSSSGRHDRVASSIX
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_5G023680.1CsaV3_5G023680.1mRNA


Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 95..114
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 93..114

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None