CsaV3_5G023100 (gene) Cucumber (Chinese Long) v3

NameCsaV3_5G023100
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr5 : 17226558 .. 17226768 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTTGGAAGAATCGAACCTGTGAAGGAGGAGAGGCACGAGCGACCAGGGAGTGCCATGTGTCGTCGCGGGAGAGGCGGAGACCAGCTGAACGGAGTGCGCGCGAACGAAAAGTTTTTTAAAAAAGGATTTAATTTGGCGTTGGTTAAGGTTCGAACCTCTGATGTCTTCGACGCGCACTCGGAGAAGGCCAAAACGACATCCTCAGATT

mRNA sequence

ATGCTTGGAAGAATCGAACCTGTGAAGGAGGAGAGGCACGAGCGACCAGGGAGTGCCATGTGTCGTCGCGGGAGAGGCGGAGACCAGCTGAACGGAGTGCGCGCGAACGAAAAGTTTTTTAAAAAAGGATTTAATTTGGCGTTGGTTAAGGTTCGAACCTCTGATGTCTTCGACGCGCACTCGGAGAAGGCCAAAACGACATCCTCAGATT

Coding sequence (CDS)

ATGCTTGGAAGAATCGAACCTGTGAAGGAGGAGAGGCACGAGCGACCAGGGAGTGCCATGTGTCGTCGCGGGAGAGGCGGAGACCAGCTGAACGGAGTGCGCGCGAACGAAAAGTTTTTTAAAAAAGGATTTAATTTGGCGTTGGTTAAGGTTCGAACCTCTGATGTCTTCGACGCGCACTCGGAGAAGGCCAAAACGACATCCTCAGATT

Protein sequence

MLGRIEPVKEERHERPGSAMCRRGRGGDQLNGVRANEKFFKKGFNLALVKVRTSDVFDAHSEKAKTTSSDX
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_5G023100.1CsaV3_5G023100.1mRNA


Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..21
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..28

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_5G023100Wax gourdcucwgoB463
CsaV3_5G023100Cucumber (Gy14) v2cgybcucB232
CsaV3_5G023100Cucumber (Gy14) v1cgycucB377
CsaV3_5G023100Cucurbita maxima (Rimu)cmacucB0877
CsaV3_5G023100Cucurbita pepo (Zucchini)cpecucB0530
CsaV3_5G023100Wild cucumber (PI 183967)cpicucB284
CsaV3_5G023100Bottle gourd (USVL1VR-Ls)cuclsiB349
CsaV3_5G023100Melon (DHL92) v3.5.1cucmeB351
CsaV3_5G023100Melon (DHL92) v3.6.1cucmedB343
CsaV3_5G023100Watermelon (Charleston Gray)cucwcgB405
CsaV3_5G023100Watermelon (97103) v2cucwmbB386