CsaV3_5G020490 (gene) Cucumber (Chinese Long) v3

NameCsaV3_5G020490
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr5 : 15372095 .. 15372435 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACCCTCAGCATGACATACGATGGAGATGACATTGACAATCTAAACATCAAATACAGGTTGGGAAGGAAACTTCCTATACTGGACTTTAGTCTACAGAAAGTGTAGGCCAATTGGGACATCTAAGTGGCAAAGCTCTGCATGTGGGAGATAATGGTCTTTTGGTTCTACTTATGATATAAAGTACTATCAGTCAAACTCCTCATAATATCATCTAGAGTGATGTTGGAACTACCTTGCCCTTGTACACCTTAGTTTCCTTGGCCTCCTCAATGGTTGTAGTTGTAAGTCCTTCCACCCTGCTAGTTCTTAGTGGAGTTCATCCAGTAACAAACTTCTAA

mRNA sequence

ATGACCCTCAGCATGACATACGATGGAGATGACATTGACAATCTAAACATCAAATACAGGTTGGGAAGGAAACTTCCTATACTGGACTTTAGTCTACAGAAAAGTGATGTTGGAACTACCTTGCCCTTGTACACCTTAGTTTCCTTGGCCTCCTCAATGGTTGTAGTTGTAAGTCCTTCCACCCTGCTAGTTCTTAGTGGAGTTCATCCAGTAACAAACTTCTAA

Coding sequence (CDS)

ATGACCCTCAGCATGACATACGATGGAGATGACATTGACAATCTAAACATCAAATACAGGTTGGGAAGGAAACTTCCTATACTGGACTTTAGTCTACAGAAAAGTGATGTTGGAACTACCTTGCCCTTGTACACCTTAGTTTCCTTGGCCTCCTCAATGGTTGTAGTTGTAAGTCCTTCCACCCTGCTAGTTCTTAGTGGAGTTCATCCAGTAACAAACTTCTAA

Protein sequence

MTLSMTYDGDDIDNLNIKYRLGRKLPILDFSLQKSDVGTTLPLYTLVSLASSMVVVVSPSTLLVLSGVHPVTNF
BLAST of CsaV3_5G020490 vs. NCBI nr
Match: KGN50916.1 (hypothetical protein Csa_5G325010 [Cucumis sativus])

HSP 1 Score: 143.3 bits (360), Expect = 3.4e-31
Identity = 74/74 (100.00%), Postives = 74/74 (100.00%), Query Frame = 0

Query: 1  MTLSMTYDGDDIDNLNIKYRLGRKLPILDFSLQKSDVGTTLPLYTLVSLASSMVVVVSPS 60
          MTLSMTYDGDDIDNLNIKYRLGRKLPILDFSLQKSDVGTTLPLYTLVSLASSMVVVVSPS
Sbjct: 1  MTLSMTYDGDDIDNLNIKYRLGRKLPILDFSLQKSDVGTTLPLYTLVSLASSMVVVVSPS 60

Query: 61 TLLVLSGVHPVTNF 75
          TLLVLSGVHPVTNF
Sbjct: 61 TLLVLSGVHPVTNF 74

BLAST of CsaV3_5G020490 vs. TrEMBL
Match: tr|A0A0A0KT63|A0A0A0KT63_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G325010 PE=4 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 2.2e-31
Identity = 74/74 (100.00%), Postives = 74/74 (100.00%), Query Frame = 0

Query: 1  MTLSMTYDGDDIDNLNIKYRLGRKLPILDFSLQKSDVGTTLPLYTLVSLASSMVVVVSPS 60
          MTLSMTYDGDDIDNLNIKYRLGRKLPILDFSLQKSDVGTTLPLYTLVSLASSMVVVVSPS
Sbjct: 1  MTLSMTYDGDDIDNLNIKYRLGRKLPILDFSLQKSDVGTTLPLYTLVSLASSMVVVVSPS 60

Query: 61 TLLVLSGVHPVTNF 75
          TLLVLSGVHPVTNF
Sbjct: 61 TLLVLSGVHPVTNF 74

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KGN50916.13.4e-31100.00hypothetical protein Csa_5G325010 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A0A0KT63|A0A0A0KT63_CUCSA2.2e-31100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G325010 PE=4 SV=1[more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_5G020490.1CsaV3_5G020490.1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None