CsaV3_5G020210 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.GCCCTTATCCATGTTTATGACGCCACTGTTGCCAAATCCTTACACAAGCATGAAGACCGGGCATTGGAAATTTCAATATGCGGTTCTTGGATGCAACTCACTTCTTCATATCTTTGCCATCAAACAGCATCTTATGGAGGTTGGATTGATATATTTGACCTACCACCAATCTTATGTTATGAGCAGATTGTCAAATTCATAGGCAACCATTGTGGGGGATATGTTGGATGCGCTAATCAAACTGGTAGAGGGTTAAATTTCAAAGGTGCTAGGTTGAAGATTCGACCAAAGTCTTATGGCCTCATACCTGCTCGTTTGTTACTACCAATGGAGCTTGCTGGATTAAAAATAACAGTGAGAATTCGTGGGGTCAATGTTATGACCACCCCAAATACATTGGCGACGGCGGCAGCGGACACACATGCGGTGGTGAGGGAATCCACCTTGCCGGCGGCAGCATCTATGGGAATTAAATCGGCAGTTACAAATCTAGGGCATTCACACGATAAAAAAGGGAAAATCCTGTTGTTTCCTTAAAAACACAGCTGGCTCACCAAATTCCAATGATTCTCAGGAATTTAACTTCTCTGCAGACCTTCCTAATCTGGTGGCAAATCTAGAGCATCACACGATAAAAAAGGACAAAATCCTATTGTTTCCTTAACAACACAGCTGACCCACCAAAAATCCCGTGATTCTCGTCAATTTGAATTTTCTGCAAACTTTCCTAATCCAGTCGCAATTAATATTCCATGTGAACAAATTCCCTCCCATTCTCCTGCGTTGCCTTATCCAAATACCCTCGTAGGCCCCACAAAATCATCATCACCTTCCTTTAATCAGCCATCATTGGCAATGGTTACTTTCCAAGCTGATTCATCCAATTTGCGTGAAGGAACAAAACACGTGGCAACACCTGAAAACCAGCTGCAAACATTCTCTGATTCGGAAGCCGACTTAACAGCCCTCTCTCCAAAAGACGATTTTGCCACTCACTCATGGGAAGATGCTGTTTTTGGAGAAAACCCAACAGAATCCAACCTCTCAATTACTATCTTACCCCCTGTCCCTACCGATTTACACAACCCGATATAA GCCCTTATCCATGTTTATGACGCCACTGTTGCCAAATCCTTACACAAGCATGAAGACCGGGCATTGGAAATTTCAATATGCGGTTCTTGGATGCAACTCACTTCTTCATATCTTTGCCATCAAACAGCATCTTATGGAGGTTGGATTGATATATTTGACCTACCACCAATCTTATGTTATGAGCAGATTGTCAAATTCATAGGCAACCATTGTGGGGGATATGTTGGATGCGCTAATCAAACTGGTAGAGGGTTAAATTTCAAAGGTGCTAGGTTGAAGATTCGACCAAAGTCTTATGGCCTCATACCTGCTCGTTTGTTACTACCAATGGAGCTTGCTGGATTAAAAATAACAGTGAGAATTCGTGGGGTCAATGTTATGACCACCCCAAATACATTGGCGACGGCGGCAGCGGACACACATGCGGTGCTGACCCACCAAAAATCCCGTGATTCTCGTCAATTTGAATTTTCTGCAAACTTTCCTAATCCAGTCGCAATTAATATTCCATGTGAACAAATTCCCTCCCATTCTCCTGCGTTGCCTTATCCAAATACCCTCGTAGGCCCCACAAAATCATCATCACCTTCCTTTAATCAGCCATCATTGGCAATGGTTACTTTCCAAGCTGATTCATCCAATTTGCGTGAAGGAACAAAACACGTGGCAACACCTGAAAACCAGCTGCAAACATTCTCTGATTCGGAAGCCGACTTAACAGCCCTCTCTCCAAAAGACGATTTTGCCACTCACTCATGGGAAGATGCTGTTTTTGGAGAAAACCCAACAGAATCCAACCTCTCAATTACTATCTTACCCCCTGTCCCTACCGATTTACACAACCCGATATAA GCCCTTATCCATGTTTATGACGCCACTGTTGCCAAATCCTTACACAAGCATGAAGACCGGGCATTGGAAATTTCAATATGCGGTTCTTGGATGCAACTCACTTCTTCATATCTTTGCCATCAAACAGCATCTTATGGAGGTTGGATTGATATATTTGACCTACCACCAATCTTATGTTATGAGCAGATTGTCAAATTCATAGGCAACCATTGTGGGGGATATGTTGGATGCGCTAATCAAACTGGTAGAGGGTTAAATTTCAAAGGTGCTAGGTTGAAGATTCGACCAAAGTCTTATGGCCTCATACCTGCTCGTTTGTTACTACCAATGGAGCTTGCTGGATTAAAAATAACAGTGAGAATTCGTGGGGTCAATGTTATGACCACCCCAAATACATTGGCGACGGCGGCAGCGGACACACATGCGGTGCTGACCCACCAAAAATCCCGTGATTCTCGTCAATTTGAATTTTCTGCAAACTTTCCTAATCCAGTCGCAATTAATATTCCATGTGAACAAATTCCCTCCCATTCTCCTGCGTTGCCTTATCCAAATACCCTCGTAGGCCCCACAAAATCATCATCACCTTCCTTTAATCAGCCATCATTGGCAATGGTTACTTTCCAAGCTGATTCATCCAATTTGCGTGAAGGAACAAAACACGTGGCAACACCTGAAAACCAGCTGCAAACATTCTCTGATTCGGAAGCCGACTTAACAGCCCTCTCTCCAAAAGACGATTTTGCCACTCACTCATGGGAAGATGCTGTTTTTGGAGAAAACCCAACAGAATCCAACCTCTCAATTACTATCTTACCCCCTGTCCCTACCGATTTACACAACCCGATATAA ALIHVYDATVAKSLHKHEDRALEISICGSWMQLTSSYLCHQTASYGGWIDIFDLPPILCYEQIVKFIGNHCGGYVGCANQTGRGLNFKGARLKIRPKSYGLIPARLLLPMELAGLKITVRIRGVNVMTTPNTLATAAADTHAVLTHQKSRDSRQFEFSANFPNPVAINIPCEQIPSHSPALPYPNTLVGPTKSSSPSFNQPSLAMVTFQADSSNLREGTKHVATPENQLQTFSDSEADLTALSPKDDFATHSWEDAVFGENPTESNLSITILPPVPTDLHNPI
BLAST of CsaV3_5G020210 vs. NCBI nr
Match: KGN50889.1 (hypothetical protein Csa_5G314850 [Cucumis sativus]) HSP 1 Score: 565.1 bits (1455), Expect = 1.4e-157 Identity = 283/300 (94.33%), Postives = 283/300 (94.33%), Query Frame = 0
BLAST of CsaV3_5G020210 vs. NCBI nr
Match: KGN61303.1 (hypothetical protein Csa_2G078070 [Cucumis sativus]) HSP 1 Score: 126.7 bits (317), Expect = 1.2e-25 Identity = 78/152 (51.32%), Postives = 97/152 (63.82%), Query Frame = 0
BLAST of CsaV3_5G020210 vs. NCBI nr
Match: KGN51145.1 (hypothetical protein Csa_5G467400 [Cucumis sativus]) HSP 1 Score: 119.8 bits (299), Expect = 1.5e-23 Identity = 59/98 (60.20%), Postives = 72/98 (73.47%), Query Frame = 0
BLAST of CsaV3_5G020210 vs. NCBI nr
Match: KGN44518.1 (hypothetical protein Csa_7G324120 [Cucumis sativus]) HSP 1 Score: 77.4 bits (189), Expect = 8.7e-11 Identity = 50/169 (29.59%), Postives = 82/169 (48.52%), Query Frame = 0
BLAST of CsaV3_5G020210 vs. NCBI nr
Match: KGN61302.1 (hypothetical protein Csa_2G078060 [Cucumis sativus]) HSP 1 Score: 74.7 bits (182), Expect = 5.6e-10 Identity = 38/64 (59.38%), Postives = 43/64 (67.19%), Query Frame = 0
BLAST of CsaV3_5G020210 vs. TrEMBL
Match: tr|A0A0A0KPT1|A0A0A0KPT1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G314850 PE=4 SV=1) HSP 1 Score: 565.1 bits (1455), Expect = 9.1e-158 Identity = 283/300 (94.33%), Postives = 283/300 (94.33%), Query Frame = 0
BLAST of CsaV3_5G020210 vs. TrEMBL
Match: tr|A0A0A0LHM7|A0A0A0LHM7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G078070 PE=4 SV=1) HSP 1 Score: 126.7 bits (317), Expect = 8.2e-26 Identity = 78/152 (51.32%), Postives = 97/152 (63.82%), Query Frame = 0
BLAST of CsaV3_5G020210 vs. TrEMBL
Match: tr|A0A0A0KND3|A0A0A0KND3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G467400 PE=4 SV=1) HSP 1 Score: 119.8 bits (299), Expect = 1.0e-23 Identity = 59/98 (60.20%), Postives = 72/98 (73.47%), Query Frame = 0
BLAST of CsaV3_5G020210 vs. TrEMBL
Match: tr|A0A0A0K504|A0A0A0K504_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G324120 PE=4 SV=1) HSP 1 Score: 77.4 bits (189), Expect = 5.7e-11 Identity = 50/169 (29.59%), Postives = 82/169 (48.52%), Query Frame = 0
BLAST of CsaV3_5G020210 vs. TrEMBL
Match: tr|A0A0A0LKM1|A0A0A0LKM1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G078060 PE=4 SV=1) HSP 1 Score: 74.7 bits (182), Expect = 3.7e-10 Identity = 38/64 (59.38%), Postives = 43/64 (67.19%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|