CsaV3_5G020210 (gene) Cucumber (Chinese Long) v3

NameCsaV3_5G020210
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr5 : 14983083 .. 14984177 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
GCCCTTATCCATGTTTATGACGCCACTGTTGCCAAATCCTTACACAAGCATGAAGACCGGGCATTGGAAATTTCAATATGCGGTTCTTGGATGCAACTCACTTCTTCATATCTTTGCCATCAAACAGCATCTTATGGAGGTTGGATTGATATATTTGACCTACCACCAATCTTATGTTATGAGCAGATTGTCAAATTCATAGGCAACCATTGTGGGGGATATGTTGGATGCGCTAATCAAACTGGTAGAGGGTTAAATTTCAAAGGTGCTAGGTTGAAGATTCGACCAAAGTCTTATGGCCTCATACCTGCTCGTTTGTTACTACCAATGGAGCTTGCTGGATTAAAAATAACAGTGAGAATTCGTGGGGTCAATGTTATGACCACCCCAAATACATTGGCGACGGCGGCAGCGGACACACATGCGGTGGTGAGGGAATCCACCTTGCCGGCGGCAGCATCTATGGGAATTAAATCGGCAGTTACAAATCTAGGGCATTCACACGATAAAAAAGGGAAAATCCTGTTGTTTCCTTAAAAACACAGCTGGCTCACCAAATTCCAATGATTCTCAGGAATTTAACTTCTCTGCAGACCTTCCTAATCTGGTGGCAAATCTAGAGCATCACACGATAAAAAAGGACAAAATCCTATTGTTTCCTTAACAACACAGCTGACCCACCAAAAATCCCGTGATTCTCGTCAATTTGAATTTTCTGCAAACTTTCCTAATCCAGTCGCAATTAATATTCCATGTGAACAAATTCCCTCCCATTCTCCTGCGTTGCCTTATCCAAATACCCTCGTAGGCCCCACAAAATCATCATCACCTTCCTTTAATCAGCCATCATTGGCAATGGTTACTTTCCAAGCTGATTCATCCAATTTGCGTGAAGGAACAAAACACGTGGCAACACCTGAAAACCAGCTGCAAACATTCTCTGATTCGGAAGCCGACTTAACAGCCCTCTCTCCAAAAGACGATTTTGCCACTCACTCATGGGAAGATGCTGTTTTTGGAGAAAACCCAACAGAATCCAACCTCTCAATTACTATCTTACCCCCTGTCCCTACCGATTTACACAACCCGATATAA

mRNA sequence

GCCCTTATCCATGTTTATGACGCCACTGTTGCCAAATCCTTACACAAGCATGAAGACCGGGCATTGGAAATTTCAATATGCGGTTCTTGGATGCAACTCACTTCTTCATATCTTTGCCATCAAACAGCATCTTATGGAGGTTGGATTGATATATTTGACCTACCACCAATCTTATGTTATGAGCAGATTGTCAAATTCATAGGCAACCATTGTGGGGGATATGTTGGATGCGCTAATCAAACTGGTAGAGGGTTAAATTTCAAAGGTGCTAGGTTGAAGATTCGACCAAAGTCTTATGGCCTCATACCTGCTCGTTTGTTACTACCAATGGAGCTTGCTGGATTAAAAATAACAGTGAGAATTCGTGGGGTCAATGTTATGACCACCCCAAATACATTGGCGACGGCGGCAGCGGACACACATGCGGTGCTGACCCACCAAAAATCCCGTGATTCTCGTCAATTTGAATTTTCTGCAAACTTTCCTAATCCAGTCGCAATTAATATTCCATGTGAACAAATTCCCTCCCATTCTCCTGCGTTGCCTTATCCAAATACCCTCGTAGGCCCCACAAAATCATCATCACCTTCCTTTAATCAGCCATCATTGGCAATGGTTACTTTCCAAGCTGATTCATCCAATTTGCGTGAAGGAACAAAACACGTGGCAACACCTGAAAACCAGCTGCAAACATTCTCTGATTCGGAAGCCGACTTAACAGCCCTCTCTCCAAAAGACGATTTTGCCACTCACTCATGGGAAGATGCTGTTTTTGGAGAAAACCCAACAGAATCCAACCTCTCAATTACTATCTTACCCCCTGTCCCTACCGATTTACACAACCCGATATAA

Coding sequence (CDS)

GCCCTTATCCATGTTTATGACGCCACTGTTGCCAAATCCTTACACAAGCATGAAGACCGGGCATTGGAAATTTCAATATGCGGTTCTTGGATGCAACTCACTTCTTCATATCTTTGCCATCAAACAGCATCTTATGGAGGTTGGATTGATATATTTGACCTACCACCAATCTTATGTTATGAGCAGATTGTCAAATTCATAGGCAACCATTGTGGGGGATATGTTGGATGCGCTAATCAAACTGGTAGAGGGTTAAATTTCAAAGGTGCTAGGTTGAAGATTCGACCAAAGTCTTATGGCCTCATACCTGCTCGTTTGTTACTACCAATGGAGCTTGCTGGATTAAAAATAACAGTGAGAATTCGTGGGGTCAATGTTATGACCACCCCAAATACATTGGCGACGGCGGCAGCGGACACACATGCGGTGCTGACCCACCAAAAATCCCGTGATTCTCGTCAATTTGAATTTTCTGCAAACTTTCCTAATCCAGTCGCAATTAATATTCCATGTGAACAAATTCCCTCCCATTCTCCTGCGTTGCCTTATCCAAATACCCTCGTAGGCCCCACAAAATCATCATCACCTTCCTTTAATCAGCCATCATTGGCAATGGTTACTTTCCAAGCTGATTCATCCAATTTGCGTGAAGGAACAAAACACGTGGCAACACCTGAAAACCAGCTGCAAACATTCTCTGATTCGGAAGCCGACTTAACAGCCCTCTCTCCAAAAGACGATTTTGCCACTCACTCATGGGAAGATGCTGTTTTTGGAGAAAACCCAACAGAATCCAACCTCTCAATTACTATCTTACCCCCTGTCCCTACCGATTTACACAACCCGATATAA

Protein sequence

ALIHVYDATVAKSLHKHEDRALEISICGSWMQLTSSYLCHQTASYGGWIDIFDLPPILCYEQIVKFIGNHCGGYVGCANQTGRGLNFKGARLKIRPKSYGLIPARLLLPMELAGLKITVRIRGVNVMTTPNTLATAAADTHAVLTHQKSRDSRQFEFSANFPNPVAINIPCEQIPSHSPALPYPNTLVGPTKSSSPSFNQPSLAMVTFQADSSNLREGTKHVATPENQLQTFSDSEADLTALSPKDDFATHSWEDAVFGENPTESNLSITILPPVPTDLHNPI
BLAST of CsaV3_5G020210 vs. NCBI nr
Match: KGN50889.1 (hypothetical protein Csa_5G314850 [Cucumis sativus])

HSP 1 Score: 565.1 bits (1455), Expect = 1.4e-157
Identity = 283/300 (94.33%), Postives = 283/300 (94.33%), Query Frame = 0

Query: 1   ALIHVYDATVAKSLHKHEDRALEISICGSWMQLTSSYLCHQTASYGGWIDIFDLPPILCY 60
           ALIHVYDATVAKSLHKHEDRALEISICGSWMQLTSSYLCHQTASYGGWIDIFDLPPILCY
Sbjct: 52  ALIHVYDATVAKSLHKHEDRALEISICGSWMQLTSSYLCHQTASYGGWIDIFDLPPILCY 111

Query: 61  EQIVKFIGNHCGGYVGCANQTGRGLNFKGARLKIRPKSYGLIPARLLLPMELAGLKITVR 120
           EQIVKFIGNHCGGYVGCANQTGRGLNFKGARLKIRPKSYGLIPARLLLPMELAGLKITVR
Sbjct: 112 EQIVKFIGNHCGGYVGCANQTGRGLNFKGARLKIRPKSYGLIPARLLLPMELAGLKITVR 171

Query: 121 IRGVNVMTTPNTLATAAADTHAV-----------------LTHQKSRDSRQFEFSANFPN 180
           IRGVNVMTTPNTLATAAADTHAV                 LTHQKSRDSRQFEFSANFPN
Sbjct: 172 IRGVNVMTTPNTLATAAADTHAVVRESTLPAAASMGIKSALTHQKSRDSRQFEFSANFPN 231

Query: 181 PVAINIPCEQIPSHSPALPYPNTLVGPTKSSSPSFNQPSLAMVTFQADSSNLREGTKHVA 240
           PVAINIPCEQIPSHSPALPYPNTLVGPTKSSSPSFNQPSLAMVTFQADSSNLREGTKHVA
Sbjct: 232 PVAINIPCEQIPSHSPALPYPNTLVGPTKSSSPSFNQPSLAMVTFQADSSNLREGTKHVA 291

Query: 241 TPENQLQTFSDSEADLTALSPKDDFATHSWEDAVFGENPTESNLSITILPPVPTDLHNPI 284
           TPENQLQTFSDSEADLTALSPKDDFATHSWEDAVFGENPTESNLSITILPPVPTDLHNPI
Sbjct: 292 TPENQLQTFSDSEADLTALSPKDDFATHSWEDAVFGENPTESNLSITILPPVPTDLHNPI 351

BLAST of CsaV3_5G020210 vs. NCBI nr
Match: KGN61303.1 (hypothetical protein Csa_2G078070 [Cucumis sativus])

HSP 1 Score: 126.7 bits (317), Expect = 1.2e-25
Identity = 78/152 (51.32%), Postives = 97/152 (63.82%), Query Frame = 0

Query: 134 ATAAADTHAVLTHQKSRDSRQFEFSANFPNPVAINIPCEQIPSHSPALPYPNTLVGPTKS 193
           +T  A  H    +  S DS+ FE S +FPN V  N   +  PSH+PAL + N L+GPTKS
Sbjct: 12  STEPAAAHMEPIYSHSPDSQPFELSTDFPNLVENNSSHDTFPSHTPALTFHNILLGPTKS 71

Query: 194 SSPSFNQPSLAMVTFQADSSNLREGTKHVATPENQLQTFSDSEADLTALS-PKDDFATHS 253
            SPSFNQPS+AMVTFQ   SNLREG KH+ATP+NQ QTFSD EA LT+ S  K   +   
Sbjct: 72  PSPSFNQPSMAMVTFQNGFSNLREGPKHMATPKNQPQTFSDLEAYLTSPSLKKTTLSLIR 131

Query: 254 WEDAVFGENPTESNLSITILPP-VPTDLHNPI 284
           W+   +G+  ++   S T  P  VPTDLH+PI
Sbjct: 132 WKKLFWGK--SQRIKSPTYYPTLVPTDLHSPI 161

BLAST of CsaV3_5G020210 vs. NCBI nr
Match: KGN51145.1 (hypothetical protein Csa_5G467400 [Cucumis sativus])

HSP 1 Score: 119.8 bits (299), Expect = 1.5e-23
Identity = 59/98 (60.20%), Postives = 72/98 (73.47%), Query Frame = 0

Query: 41  QTASYGGWIDIFDLPPILCYEQIVKFIGNHCGGYVGCANQTGRGLNFKGARLKIRPKSYG 100
           QTAS+GGWID+FDLP  L  EQI +FIGN CGG++G +N+T RGLN + ARLK+   ++G
Sbjct: 17  QTASHGGWIDVFDLPLNLLNEQIFRFIGNCCGGFIGSSNRTDRGLNQQAARLKVNTNNHG 76

Query: 101 LIPARLLLPMELAGLKITVRIRGVNVMTTPNTLATAAA 139
           L+P  L+LP EL G  IT  IRGVNV TT N L T AA
Sbjct: 77  LMPTCLILPKELVGSDITNNIRGVNVPTTTNQLETMAA 114

BLAST of CsaV3_5G020210 vs. NCBI nr
Match: KGN44518.1 (hypothetical protein Csa_7G324120 [Cucumis sativus])

HSP 1 Score: 77.4 bits (189), Expect = 8.7e-11
Identity = 50/169 (29.59%), Postives = 82/169 (48.52%), Query Frame = 0

Query: 35  SSYLCHQTASYGGWIDIFDLPPILCYEQIVKFIGNHCGGYVGCANQTGRGLNFKGARLKI 94
           SS+     AS+GGWID  +LPP    ++I  + G+ C G++  ++QT R +    AR+KI
Sbjct: 29  SSFQPSFAASFGGWIDTINLPPPTWKDEIFPYTGDQCSGFISASDQTNRVIVLTAARIKI 88

Query: 95  RPKSYGLIPARLLLPMELAGLKITVRIRGVNVMTTPNTLATAAADTHAVLTHQKSRDSRQ 154
           +P ++  I  +L+LP EL G++ TV I+GV               ++  ++ +   +  Q
Sbjct: 89  KPNTHDFIQNKLVLPPELCGMEWTVDIKGV---------------SNGKISRKSKINLVQ 148

Query: 155 FEFSANFPNPVAINIPCEQIPSHSPALPYPNTLVGPTKSSSPSFNQPSL 204
              S +  +       C  I S  P  PYP     PT   SP+   P++
Sbjct: 149 LVASTSANH-------CPVITSVQPVTPYP-----PTTDHSPATTIPTI 170

BLAST of CsaV3_5G020210 vs. NCBI nr
Match: KGN61302.1 (hypothetical protein Csa_2G078060 [Cucumis sativus])

HSP 1 Score: 74.7 bits (182), Expect = 5.6e-10
Identity = 38/64 (59.38%), Postives = 43/64 (67.19%), Query Frame = 0

Query: 2   LIHVYDATVAKSLHKHED----RALEISICGSWMQLTSSYLCHQTASYGGWIDIFDLPPI 61
           LIHVYD TVA+ L+ HED    R   +    +   L SSYLC QTASYGGWID+FDLPPI
Sbjct: 55  LIHVYDTTVAQFLYNHEDWESIRKFNLHFLDA--SLISSYLCQQTASYGGWIDVFDLPPI 114

BLAST of CsaV3_5G020210 vs. TrEMBL
Match: tr|A0A0A0KPT1|A0A0A0KPT1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G314850 PE=4 SV=1)

HSP 1 Score: 565.1 bits (1455), Expect = 9.1e-158
Identity = 283/300 (94.33%), Postives = 283/300 (94.33%), Query Frame = 0

Query: 1   ALIHVYDATVAKSLHKHEDRALEISICGSWMQLTSSYLCHQTASYGGWIDIFDLPPILCY 60
           ALIHVYDATVAKSLHKHEDRALEISICGSWMQLTSSYLCHQTASYGGWIDIFDLPPILCY
Sbjct: 52  ALIHVYDATVAKSLHKHEDRALEISICGSWMQLTSSYLCHQTASYGGWIDIFDLPPILCY 111

Query: 61  EQIVKFIGNHCGGYVGCANQTGRGLNFKGARLKIRPKSYGLIPARLLLPMELAGLKITVR 120
           EQIVKFIGNHCGGYVGCANQTGRGLNFKGARLKIRPKSYGLIPARLLLPMELAGLKITVR
Sbjct: 112 EQIVKFIGNHCGGYVGCANQTGRGLNFKGARLKIRPKSYGLIPARLLLPMELAGLKITVR 171

Query: 121 IRGVNVMTTPNTLATAAADTHAV-----------------LTHQKSRDSRQFEFSANFPN 180
           IRGVNVMTTPNTLATAAADTHAV                 LTHQKSRDSRQFEFSANFPN
Sbjct: 172 IRGVNVMTTPNTLATAAADTHAVVRESTLPAAASMGIKSALTHQKSRDSRQFEFSANFPN 231

Query: 181 PVAINIPCEQIPSHSPALPYPNTLVGPTKSSSPSFNQPSLAMVTFQADSSNLREGTKHVA 240
           PVAINIPCEQIPSHSPALPYPNTLVGPTKSSSPSFNQPSLAMVTFQADSSNLREGTKHVA
Sbjct: 232 PVAINIPCEQIPSHSPALPYPNTLVGPTKSSSPSFNQPSLAMVTFQADSSNLREGTKHVA 291

Query: 241 TPENQLQTFSDSEADLTALSPKDDFATHSWEDAVFGENPTESNLSITILPPVPTDLHNPI 284
           TPENQLQTFSDSEADLTALSPKDDFATHSWEDAVFGENPTESNLSITILPPVPTDLHNPI
Sbjct: 292 TPENQLQTFSDSEADLTALSPKDDFATHSWEDAVFGENPTESNLSITILPPVPTDLHNPI 351

BLAST of CsaV3_5G020210 vs. TrEMBL
Match: tr|A0A0A0LHM7|A0A0A0LHM7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G078070 PE=4 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 8.2e-26
Identity = 78/152 (51.32%), Postives = 97/152 (63.82%), Query Frame = 0

Query: 134 ATAAADTHAVLTHQKSRDSRQFEFSANFPNPVAINIPCEQIPSHSPALPYPNTLVGPTKS 193
           +T  A  H    +  S DS+ FE S +FPN V  N   +  PSH+PAL + N L+GPTKS
Sbjct: 12  STEPAAAHMEPIYSHSPDSQPFELSTDFPNLVENNSSHDTFPSHTPALTFHNILLGPTKS 71

Query: 194 SSPSFNQPSLAMVTFQADSSNLREGTKHVATPENQLQTFSDSEADLTALS-PKDDFATHS 253
            SPSFNQPS+AMVTFQ   SNLREG KH+ATP+NQ QTFSD EA LT+ S  K   +   
Sbjct: 72  PSPSFNQPSMAMVTFQNGFSNLREGPKHMATPKNQPQTFSDLEAYLTSPSLKKTTLSLIR 131

Query: 254 WEDAVFGENPTESNLSITILPP-VPTDLHNPI 284
           W+   +G+  ++   S T  P  VPTDLH+PI
Sbjct: 132 WKKLFWGK--SQRIKSPTYYPTLVPTDLHSPI 161

BLAST of CsaV3_5G020210 vs. TrEMBL
Match: tr|A0A0A0KND3|A0A0A0KND3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G467400 PE=4 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 1.0e-23
Identity = 59/98 (60.20%), Postives = 72/98 (73.47%), Query Frame = 0

Query: 41  QTASYGGWIDIFDLPPILCYEQIVKFIGNHCGGYVGCANQTGRGLNFKGARLKIRPKSYG 100
           QTAS+GGWID+FDLP  L  EQI +FIGN CGG++G +N+T RGLN + ARLK+   ++G
Sbjct: 17  QTASHGGWIDVFDLPLNLLNEQIFRFIGNCCGGFIGSSNRTDRGLNQQAARLKVNTNNHG 76

Query: 101 LIPARLLLPMELAGLKITVRIRGVNVMTTPNTLATAAA 139
           L+P  L+LP EL G  IT  IRGVNV TT N L T AA
Sbjct: 77  LMPTCLILPKELVGSDITNNIRGVNVPTTTNQLETMAA 114

BLAST of CsaV3_5G020210 vs. TrEMBL
Match: tr|A0A0A0K504|A0A0A0K504_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G324120 PE=4 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 5.7e-11
Identity = 50/169 (29.59%), Postives = 82/169 (48.52%), Query Frame = 0

Query: 35  SSYLCHQTASYGGWIDIFDLPPILCYEQIVKFIGNHCGGYVGCANQTGRGLNFKGARLKI 94
           SS+     AS+GGWID  +LPP    ++I  + G+ C G++  ++QT R +    AR+KI
Sbjct: 29  SSFQPSFAASFGGWIDTINLPPPTWKDEIFPYTGDQCSGFISASDQTNRVIVLTAARIKI 88

Query: 95  RPKSYGLIPARLLLPMELAGLKITVRIRGVNVMTTPNTLATAAADTHAVLTHQKSRDSRQ 154
           +P ++  I  +L+LP EL G++ TV I+GV               ++  ++ +   +  Q
Sbjct: 89  KPNTHDFIQNKLVLPPELCGMEWTVDIKGV---------------SNGKISRKSKINLVQ 148

Query: 155 FEFSANFPNPVAINIPCEQIPSHSPALPYPNTLVGPTKSSSPSFNQPSL 204
              S +  +       C  I S  P  PYP     PT   SP+   P++
Sbjct: 149 LVASTSANH-------CPVITSVQPVTPYP-----PTTDHSPATTIPTI 170

BLAST of CsaV3_5G020210 vs. TrEMBL
Match: tr|A0A0A0LKM1|A0A0A0LKM1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G078060 PE=4 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 3.7e-10
Identity = 38/64 (59.38%), Postives = 43/64 (67.19%), Query Frame = 0

Query: 2   LIHVYDATVAKSLHKHED----RALEISICGSWMQLTSSYLCHQTASYGGWIDIFDLPPI 61
           LIHVYD TVA+ L+ HED    R   +    +   L SSYLC QTASYGGWID+FDLPPI
Sbjct: 55  LIHVYDTTVAQFLYNHEDWESIRKFNLHFLDA--SLISSYLCQQTASYGGWIDVFDLPPI 114

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KGN50889.11.4e-15794.33hypothetical protein Csa_5G314850 [Cucumis sativus][more]
KGN61303.11.2e-2551.32hypothetical protein Csa_2G078070 [Cucumis sativus][more]
KGN51145.11.5e-2360.20hypothetical protein Csa_5G467400 [Cucumis sativus][more]
KGN44518.18.7e-1129.59hypothetical protein Csa_7G324120 [Cucumis sativus][more]
KGN61302.15.6e-1059.38hypothetical protein Csa_2G078060 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A0A0KPT1|A0A0A0KPT1_CUCSA9.1e-15894.33Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G314850 PE=4 SV=1[more]
tr|A0A0A0LHM7|A0A0A0LHM7_CUCSA8.2e-2651.32Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G078070 PE=4 SV=1[more]
tr|A0A0A0KND3|A0A0A0KND3_CUCSA1.0e-2360.20Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G467400 PE=4 SV=1[more]
tr|A0A0A0K504|A0A0A0K504_CUCSA5.7e-1129.59Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G324120 PE=4 SV=1[more]
tr|A0A0A0LKM1|A0A0A0LKM1_CUCSA3.7e-1059.38Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G078060 PE=4 SV=1[more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_5G020210.1CsaV3_5G020210.1mRNA


The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_5G020210CSPI05G13310Wild cucumber (PI 183967)cpicucB284
CsaV3_5G020210CsGy5G013310Cucumber (Gy14) v2cgybcucB232
The following gene(s) are paralogous to this gene:

None